sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | lambda-align 1.0.3-5 (armel) Mon, 18 Nov 2019 12:27:57 +0000 | +==============================================================================+ Package: lambda-align Version: 1.0.3-5 Source Version: 1.0.3-5 Distribution: unstable Machine Architecture: amd64 Host Architecture: armel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-948ae5e5-5c7f-4bf5-83a7-08f57bd6c40d' with '<>' I: NOTICE: Log filtering will replace 'build/lambda-align-z1eET8/resolver-3gd3bI' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [139 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-11-18-0814.08.pdiff [5773 B] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-11-18-0814.08.pdiff [5773 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-11-18-0814.08.pdiff [14.6 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-11-18-0814.08.pdiff [14.6 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main armel Packages [7929 kB] Fetched 8143 kB in 2s (4219 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'lambda-align' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/lambda-align.git Please use: git clone https://salsa.debian.org/med-team/lambda-align.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 333 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main lambda-align 1.0.3-5 (dsc) [2154 B] Get:2 http://debian.oregonstate.edu/debian unstable/main lambda-align 1.0.3-5 (tar) [323 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main lambda-align 1.0.3-5 (diff) [8000 B] Fetched 333 kB in 0s (7290 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/lambda-align-z1eET8/lambda-align-1.0.3' with '<>' I: NOTICE: Log filtering will replace 'build/lambda-align-z1eET8' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 12~), libseqan2-dev, cmake, zlib1g-dev, libbz2-dev, openssl, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel Filtered Build-Depends: debhelper (>= 12~), libseqan2-dev, cmake, zlib1g-dev, libbz2-dev, openssl, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [429 B] Get:5 copy:/<>/apt_archive ./ Packages [519 B] Fetched 1905 B in 0s (99.9 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdmainutils cmake cmake-data cpp-9-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-9-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-9-arm-linux-gnueabi gcc-9-arm-linux-gnueabi-base gcc-9-base:armel gcc-9-cross-base gcc-arm-linux-gnueabi gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libasan5:armel libasan5-armel-cross libatomic1:armel libatomic1-armel-cross libbrotli1 libbsd0 libbz2-1.0:armel libbz2-dev:armel libc6:armel libc6-armel-cross libc6-dev:armel libc6-dev-armel-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcurl4 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libexpat1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:armel libgcc-9-dev-armel-cross libgcc1:armel libgcc1-armel-cross libglib2.0-0 libgomp1:armel libgomp1-armel-cross libgssapi-krb5-2 libicu63 libio-string-perl libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libnghttp2-14 libpipeline1 libprocps7 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libseqan2-dev libsigsegv2 libssh2-1 libssl1.1 libstdc++-9-dev:armel libstdc++-9-dev-armel-cross libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db openssl po-debconf procps sensible-utils ucf zlib1g:armel zlib1g-dev:armel Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican | wordlist whois vacation cmake-doc ninja-build gcc-9-locales cpp-doc dh-make binutils-multiarch gcc-9-doc libstdc++6-9-dbg-armel-cross libgcc1-dbg-armel-cross libgomp1-dbg-armel-cross libitm1-dbg-armel-cross libatomic1-dbg-armel-cross libasan5-dbg-armel-cross liblsan0-dbg-armel-cross libtsan0-dbg-armel-cross libubsan1-dbg-armel-cross libquadmath0-dbg-armel-cross manpages-dev flex bison gdb-arm-linux-gnueabi gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff lrzip glibc-doc:armel libc-l10n:armel locales:armel manpages-dev:armel krb5-doc krb5-user libstdc++-9-doc:armel libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser ca-certificates libmail-box-perl Recommended packages: curl | wget | lynx bzip2-doc:armel libidn2-0:armel ca-certificates libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales libgpm2 publicsuffix libsasl2-modules libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdmainutils cmake cmake-data cpp-9-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-9-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-9-arm-linux-gnueabi gcc-9-arm-linux-gnueabi-base gcc-9-base:armel gcc-9-cross-base gcc-arm-linux-gnueabi gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libasan5:armel libasan5-armel-cross libatomic1:armel libatomic1-armel-cross libbrotli1 libbsd0 libbz2-1.0:armel libbz2-dev:armel libc6:armel libc6-armel-cross libc6-dev:armel libc6-dev-armel-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcurl4 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libexpat1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:armel libgcc-9-dev-armel-cross libgcc1:armel libgcc1-armel-cross libglib2.0-0 libgomp1:armel libgomp1-armel-cross libgssapi-krb5-2 libicu63 libio-string-perl libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libnghttp2-14 libpipeline1 libprocps7 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libseqan2-dev libsigsegv2 libssh2-1 libssl1.1 libstdc++-9-dev:armel libstdc++-9-dev-armel-cross libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db openssl po-debconf procps sbuild-build-depends-main-dummy:armel sensible-utils ucf zlib1g:armel zlib1g-dev:armel 0 upgraded, 116 newly installed, 0 to remove and 0 not upgraded. Need to get 74.2 MB of archives. After this operation, 299 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [940 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.0-1 [1307 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main armel gcc-9-base armel 9.2.1-19 [194 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20191019-1 [102 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libprocps7 amd64 2:3.3.15-2+b1 [62.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 procps amd64 2:3.3.15-2+b1 [259 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.37-6 [253 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.37-6 [119 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.37-6 [67.2 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabi amd64 2.33.1-2 [2721 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 cmake-data all 3.15.4-1 [1580 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-2 [8301 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b4 [710 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive13 amd64 3.4.0-1+b1 [335 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libbrotli1 amd64 1.0.7-5+b1 [267 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libkeyutils1 amd64 1.6-6 [15.0 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5support0 amd64 1.17-6 [64.6 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libk5crypto3 amd64 1.17-6 [116 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1d-2 [1540 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5-3 amd64 1.17-6 [366 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.17-6 [156 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-1 [69.0 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-2 amd64 2.1.27+dfsg-1 [106 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-common all 2.4.48+dfsg-1 [90.8 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-2.4-2 amd64 2.4.48+dfsg-1+b2 [225 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libnghttp2-14 amd64 1.39.2-1 [82.4 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libpsl5 amd64 0.20.2-2 [53.7 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b1 [60.8 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libssh2-1 amd64 1.8.0-2.1 [140 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libcurl4 amd64 7.66.0-1+b1 [332 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.2.9-1 [94.3 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3+b1 [77.9 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 librhash0 amd64 1.3.8-1 [122 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libuv1 amd64 1.33.1-2 [125 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 cmake amd64 3.15.4-1 [3568 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-arm-linux-gnueabi-base amd64 9.2.1-19cross1 [194 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-arm-linux-gnueabi amd64 9.2.1-19cross1 [6812 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabi amd64 4:9.2.1-3.1 [16.7 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base all 9.2.1-19cross1 [190 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armel-cross all 2.29-1cross7 [1139 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-armel-cross all 1:9.2.1-19cross1 [39.0 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armel-cross all 9.2.1-19cross1 [74.8 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armel-cross all 9.2.1-19cross1 [8944 B] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-armel-cross all 9.2.1-19cross1 [340 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armel-cross all 9.2.1-19cross1 [377 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armel-cross all 9.2.1-19cross1 [110 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-armel-cross all 9.2.1-19cross1 [644 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-arm-linux-gnueabi amd64 9.2.1-19cross1 [7157 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabi amd64 4:9.2.1-3.1 [1464 B] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armel-cross all 5.2.9-2cross7 [1312 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armel-cross all 2.29-1cross7 [2155 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-armel-cross all 9.2.1-19cross1 [1709 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-arm-linux-gnueabi amd64 9.2.1-19cross1 [7390 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabi amd64 4:9.2.1-3.1 [1180 B] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1+b1 [344 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.29-1 [67.4 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armel all 12.8 [6640 B] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-11 [547 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 12.7.1 [173 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.67-1 [104 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.6.2-1 [23.6 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.6.2-1 [14.6 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-2 [145 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.62.2-3 [1318 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.7.1 [997 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main armel libgcc1 armel 1:9.2.1-19 [38.9 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main armel libc6 armel 2.29-3 [2348 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main armel libasan5 armel 9.2.1-19 [347 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main armel libatomic1 armel 9.2.1-19 [9092 B] Get:104 http://debian.oregonstate.edu/debian unstable/main armel libbz2-1.0 armel 1.0.8-2 [45.3 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main armel linux-libc-dev armel 5.3.9-2 [986 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main armel libc6-dev armel 2.29-3 [2195 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main armel libbz2-dev armel 1.0.8-2 [28.2 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main armel libgomp1 armel 9.2.1-19 [77.1 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main armel libstdc++6 armel 9.2.1-19 [415 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main armel libubsan1 armel 9.2.1-19 [111 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main armel libgcc-9-dev armel 9.2.1-19 [643 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main amd64 libseqan2-dev all 2.4.0+dfsg-11 [1220 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main armel libstdc++-9-dev armel 9.2.1-19 [1739 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main amd64 openssl amd64 1.1.1d-2 [840 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main armel zlib1g armel 1:1.2.11.dfsg-1+b1 [84.7 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main armel zlib1g-dev armel 1:1.2.11.dfsg-1+b1 [204 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 74.2 MB in 1s (69.6 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 15000 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../001-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../002-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../003-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../004-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../005-man-db_2.9.0-1_amd64.deb ... Unpacking man-db (2.9.0-1) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../006-liblocale-gettext-perl_1.07-4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4) ... Selecting previously unselected package gcc-9-base:armel. Preparing to unpack .../007-gcc-9-base_9.2.1-19_armel.deb ... Unpacking gcc-9-base:armel (9.2.1-19) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../008-libncurses6_6.1+20191019-1_amd64.deb ... Unpacking libncurses6:amd64 (6.1+20191019-1) ... Selecting previously unselected package libprocps7:amd64. Preparing to unpack .../009-libprocps7_2%3a3.3.15-2+b1_amd64.deb ... Unpacking libprocps7:amd64 (2:3.3.15-2+b1) ... Selecting previously unselected package procps. Preparing to unpack .../010-procps_2%3a3.3.15-2+b1_amd64.deb ... Unpacking procps (2:3.3.15-2+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../011-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../012-libmagic-mgc_1%3a5.37-6_amd64.deb ... Unpacking libmagic-mgc (1:5.37-6) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../013-libmagic1_1%3a5.37-6_amd64.deb ... Unpacking libmagic1:amd64 (1:5.37-6) ... Selecting previously unselected package file. Preparing to unpack .../014-file_1%3a5.37-6_amd64.deb ... Unpacking file (1:5.37-6) ... Selecting previously unselected package gettext-base. Preparing to unpack .../015-gettext-base_0.19.8.1-9_amd64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package ucf. Preparing to unpack .../016-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../017-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../018-m4_1.4.18-4_amd64.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../019-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../020-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../021-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../022-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package binutils-arm-linux-gnueabi. Preparing to unpack .../023-binutils-arm-linux-gnueabi_2.33.1-2_amd64.deb ... Unpacking binutils-arm-linux-gnueabi (2.33.1-2) ... Selecting previously unselected package cmake-data. Preparing to unpack .../024-cmake-data_3.15.4-1_all.deb ... Unpacking cmake-data (3.15.4-1) ... Selecting previously unselected package libicu63:amd64. Preparing to unpack .../025-libicu63_63.2-2_amd64.deb ... Unpacking libicu63:amd64 (63.2-2) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../026-libxml2_2.9.4+dfsg1-7+b4_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-7+b4) ... Selecting previously unselected package libarchive13:amd64. Preparing to unpack .../027-libarchive13_3.4.0-1+b1_amd64.deb ... Unpacking libarchive13:amd64 (3.4.0-1+b1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../028-libbrotli1_1.0.7-5+b1_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.7-5+b1) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../029-libkeyutils1_1.6-6_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6-6) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../030-libkrb5support0_1.17-6_amd64.deb ... Unpacking libkrb5support0:amd64 (1.17-6) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../031-libk5crypto3_1.17-6_amd64.deb ... Unpacking libk5crypto3:amd64 (1.17-6) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../032-libssl1.1_1.1.1d-2_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1d-2) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../033-libkrb5-3_1.17-6_amd64.deb ... Unpacking libkrb5-3:amd64 (1.17-6) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../034-libgssapi-krb5-2_1.17-6_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.17-6) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../035-libsasl2-modules-db_2.1.27+dfsg-1_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.27+dfsg-1) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../036-libsasl2-2_2.1.27+dfsg-1_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.27+dfsg-1) ... Selecting previously unselected package libldap-common. Preparing to unpack .../037-libldap-common_2.4.48+dfsg-1_all.deb ... Unpacking libldap-common (2.4.48+dfsg-1) ... Selecting previously unselected package libldap-2.4-2:amd64. Preparing to unpack .../038-libldap-2.4-2_2.4.48+dfsg-1+b2_amd64.deb ... Unpacking libldap-2.4-2:amd64 (2.4.48+dfsg-1+b2) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../039-libnghttp2-14_1.39.2-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.39.2-1) ... Selecting previously unselected package libpsl5:amd64. Preparing to unpack .../040-libpsl5_0.20.2-2_amd64.deb ... Unpacking libpsl5:amd64 (0.20.2-2) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../041-librtmp1_2.4+20151223.gitfa8646d.1-2+b1_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b1) ... Selecting previously unselected package libssh2-1:amd64. Preparing to unpack .../042-libssh2-1_1.8.0-2.1_amd64.deb ... Unpacking libssh2-1:amd64 (1.8.0-2.1) ... Selecting previously unselected package libcurl4:amd64. Preparing to unpack .../043-libcurl4_7.66.0-1+b1_amd64.deb ... Unpacking libcurl4:amd64 (7.66.0-1+b1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../044-libexpat1_2.2.9-1_amd64.deb ... Unpacking libexpat1:amd64 (2.2.9-1) ... Selecting previously unselected package libjsoncpp1:amd64. Preparing to unpack .../045-libjsoncpp1_1.7.4-3+b1_amd64.deb ... Unpacking libjsoncpp1:amd64 (1.7.4-3+b1) ... Selecting previously unselected package librhash0:amd64. Preparing to unpack .../046-librhash0_1.3.8-1_amd64.deb ... Unpacking librhash0:amd64 (1.3.8-1) ... Selecting previously unselected package libuv1:amd64. Preparing to unpack .../047-libuv1_1.33.1-2_amd64.deb ... Unpacking libuv1:amd64 (1.33.1-2) ... Selecting previously unselected package cmake. Preparing to unpack .../048-cmake_3.15.4-1_amd64.deb ... Unpacking cmake (3.15.4-1) ... Selecting previously unselected package gcc-9-arm-linux-gnueabi-base:amd64. Preparing to unpack .../049-gcc-9-arm-linux-gnueabi-base_9.2.1-19cross1_amd64.deb ... Unpacking gcc-9-arm-linux-gnueabi-base:amd64 (9.2.1-19cross1) ... Selecting previously unselected package cpp-9-arm-linux-gnueabi. Preparing to unpack .../050-cpp-9-arm-linux-gnueabi_9.2.1-19cross1_amd64.deb ... Unpacking cpp-9-arm-linux-gnueabi (9.2.1-19cross1) ... Selecting previously unselected package cpp-arm-linux-gnueabi. Preparing to unpack .../051-cpp-arm-linux-gnueabi_4%3a9.2.1-3.1_amd64.deb ... Unpacking cpp-arm-linux-gnueabi (4:9.2.1-3.1) ... Selecting previously unselected package cross-config. Preparing to unpack .../052-cross-config_2.6.15-3_all.deb ... Unpacking cross-config (2.6.15-3) ... Selecting previously unselected package gcc-9-cross-base. Preparing to unpack .../053-gcc-9-cross-base_9.2.1-19cross1_all.deb ... Unpacking gcc-9-cross-base (9.2.1-19cross1) ... Selecting previously unselected package libc6-armel-cross. Preparing to unpack .../054-libc6-armel-cross_2.29-1cross7_all.deb ... Unpacking libc6-armel-cross (2.29-1cross7) ... Selecting previously unselected package libgcc1-armel-cross. Preparing to unpack .../055-libgcc1-armel-cross_1%3a9.2.1-19cross1_all.deb ... Unpacking libgcc1-armel-cross (1:9.2.1-19cross1) ... Selecting previously unselected package libgomp1-armel-cross. Preparing to unpack .../056-libgomp1-armel-cross_9.2.1-19cross1_all.deb ... Unpacking libgomp1-armel-cross (9.2.1-19cross1) ... Selecting previously unselected package libatomic1-armel-cross. Preparing to unpack .../057-libatomic1-armel-cross_9.2.1-19cross1_all.deb ... Unpacking libatomic1-armel-cross (9.2.1-19cross1) ... Selecting previously unselected package libasan5-armel-cross. Preparing to unpack .../058-libasan5-armel-cross_9.2.1-19cross1_all.deb ... Unpacking libasan5-armel-cross (9.2.1-19cross1) ... Selecting previously unselected package libstdc++6-armel-cross. Preparing to unpack .../059-libstdc++6-armel-cross_9.2.1-19cross1_all.deb ... Unpacking libstdc++6-armel-cross (9.2.1-19cross1) ... Selecting previously unselected package libubsan1-armel-cross. Preparing to unpack .../060-libubsan1-armel-cross_9.2.1-19cross1_all.deb ... Unpacking libubsan1-armel-cross (9.2.1-19cross1) ... Selecting previously unselected package libgcc-9-dev-armel-cross. Preparing to unpack .../061-libgcc-9-dev-armel-cross_9.2.1-19cross1_all.deb ... Unpacking libgcc-9-dev-armel-cross (9.2.1-19cross1) ... Selecting previously unselected package gcc-9-arm-linux-gnueabi. Preparing to unpack .../062-gcc-9-arm-linux-gnueabi_9.2.1-19cross1_amd64.deb ... Unpacking gcc-9-arm-linux-gnueabi (9.2.1-19cross1) ... Selecting previously unselected package gcc-arm-linux-gnueabi. Preparing to unpack .../063-gcc-arm-linux-gnueabi_4%3a9.2.1-3.1_amd64.deb ... Unpacking gcc-arm-linux-gnueabi (4:9.2.1-3.1) ... Selecting previously unselected package linux-libc-dev-armel-cross. Preparing to unpack .../064-linux-libc-dev-armel-cross_5.2.9-2cross7_all.deb ... Unpacking linux-libc-dev-armel-cross (5.2.9-2cross7) ... Selecting previously unselected package libc6-dev-armel-cross. Preparing to unpack .../065-libc6-dev-armel-cross_2.29-1cross7_all.deb ... Unpacking libc6-dev-armel-cross (2.29-1cross7) ... Selecting previously unselected package libstdc++-9-dev-armel-cross. Preparing to unpack .../066-libstdc++-9-dev-armel-cross_9.2.1-19cross1_all.deb ... Unpacking libstdc++-9-dev-armel-cross (9.2.1-19cross1) ... Selecting previously unselected package g++-9-arm-linux-gnueabi. Preparing to unpack .../067-g++-9-arm-linux-gnueabi_9.2.1-19cross1_amd64.deb ... Unpacking g++-9-arm-linux-gnueabi (9.2.1-19cross1) ... Selecting previously unselected package g++-arm-linux-gnueabi. Preparing to unpack .../068-g++-arm-linux-gnueabi_4%3a9.2.1-3.1_amd64.deb ... Unpacking g++-arm-linux-gnueabi (4:9.2.1-3.1) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../069-libconfig-inifiles-perl_3.000001-1_all.deb ... Unpacking libconfig-inifiles-perl (3.000001-1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../070-libio-string-perl_1.08-3_all.deb ... Unpacking libio-string-perl (1.08-3) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../071-libxml-namespacesupport-perl_1.12-1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../072-libxml-sax-base-perl_1.09-1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../073-libxml-sax-perl_1.02+dfsg-1_all.deb ... Unpacking libxml-sax-perl (1.02+dfsg-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../074-libxml-libxml-perl_2.0134+dfsg-1+b1_amd64.deb ... Unpacking libxml-libxml-perl (2.0134+dfsg-1+b1) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../075-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../076-libyaml-perl_1.29-1_all.deb ... Unpacking libyaml-perl (1.29-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../077-libconfig-auto-perl_0.44-1_all.deb ... Unpacking libconfig-auto-perl (0.44-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../078-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../079-libfile-homedir-perl_1.004-1_all.deb ... Unpacking libfile-homedir-perl (1.004-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../080-libdebian-dpkgcross-perl_2.6.15-3_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-3) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../081-dpkg-cross_2.6.15-3_all.deb ... Unpacking dpkg-cross (2.6.15-3) ... Selecting previously unselected package crossbuild-essential-armel. Preparing to unpack .../082-crossbuild-essential-armel_12.8_all.deb ... Unpacking crossbuild-essential-armel (12.8) ... Selecting previously unselected package libtool. Preparing to unpack .../083-libtool_2.4.6-11_all.deb ... Unpacking libtool (2.4.6-11) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../084-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../085-libdebhelper-perl_12.7.1_all.deb ... Unpacking libdebhelper-perl (12.7.1) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../086-libarchive-zip-perl_1.67-1_all.deb ... Unpacking libarchive-zip-perl (1.67-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../087-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../088-libfile-stripnondeterminism-perl_1.6.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.6.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../089-dh-strip-nondeterminism_1.6.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.6.2-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../090-libelf1_0.176-1.1_amd64.deb ... Unpacking libelf1:amd64 (0.176-1.1) ... Selecting previously unselected package dwz. Preparing to unpack .../091-dwz_0.13-2_amd64.deb ... Unpacking dwz (0.13-2) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../092-libglib2.0-0_2.62.2-3_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.62.2-3) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../093-libcroco3_0.6.13-1_amd64.deb ... Unpacking libcroco3:amd64 (0.6.13-1) ... Selecting previously unselected package gettext. Preparing to unpack .../094-gettext_0.19.8.1-9_amd64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../095-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../096-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../097-debhelper_12.7.1_all.deb ... Unpacking debhelper (12.7.1) ... Selecting previously unselected package libgcc1:armel. Preparing to unpack .../098-libgcc1_1%3a9.2.1-19_armel.deb ... Unpacking libgcc1:armel (1:9.2.1-19) ... Selecting previously unselected package libc6:armel. Preparing to unpack .../099-libc6_2.29-3_armel.deb ... Unpacking libc6:armel (2.29-3) ... Selecting previously unselected package libasan5:armel. Preparing to unpack .../100-libasan5_9.2.1-19_armel.deb ... Unpacking libasan5:armel (9.2.1-19) ... Selecting previously unselected package libatomic1:armel. Preparing to unpack .../101-libatomic1_9.2.1-19_armel.deb ... Unpacking libatomic1:armel (9.2.1-19) ... Selecting previously unselected package libbz2-1.0:armel. Preparing to unpack .../102-libbz2-1.0_1.0.8-2_armel.deb ... Unpacking libbz2-1.0:armel (1.0.8-2) ... Selecting previously unselected package linux-libc-dev:armel. Preparing to unpack .../103-linux-libc-dev_5.3.9-2_armel.deb ... Unpacking linux-libc-dev:armel (5.3.9-2) ... Selecting previously unselected package libc6-dev:armel. Preparing to unpack .../104-libc6-dev_2.29-3_armel.deb ... Unpacking libc6-dev:armel (2.29-3) ... Selecting previously unselected package libbz2-dev:armel. Preparing to unpack .../105-libbz2-dev_1.0.8-2_armel.deb ... Unpacking libbz2-dev:armel (1.0.8-2) ... Selecting previously unselected package libgomp1:armel. Preparing to unpack .../106-libgomp1_9.2.1-19_armel.deb ... Unpacking libgomp1:armel (9.2.1-19) ... Selecting previously unselected package libstdc++6:armel. Preparing to unpack .../107-libstdc++6_9.2.1-19_armel.deb ... Unpacking libstdc++6:armel (9.2.1-19) ... Selecting previously unselected package libubsan1:armel. Preparing to unpack .../108-libubsan1_9.2.1-19_armel.deb ... Unpacking libubsan1:armel (9.2.1-19) ... Selecting previously unselected package libgcc-9-dev:armel. Preparing to unpack .../109-libgcc-9-dev_9.2.1-19_armel.deb ... Unpacking libgcc-9-dev:armel (9.2.1-19) ... Selecting previously unselected package libseqan2-dev. Preparing to unpack .../110-libseqan2-dev_2.4.0+dfsg-11_all.deb ... Unpacking libseqan2-dev (2.4.0+dfsg-11) ... Selecting previously unselected package libstdc++-9-dev:armel. Preparing to unpack .../111-libstdc++-9-dev_9.2.1-19_armel.deb ... Unpacking libstdc++-9-dev:armel (9.2.1-19) ... Selecting previously unselected package openssl. Preparing to unpack .../112-openssl_1.1.1d-2_amd64.deb ... Unpacking openssl (1.1.1d-2) ... Selecting previously unselected package zlib1g:armel. Preparing to unpack .../113-zlib1g_1%3a1.2.11.dfsg-1+b1_armel.deb ... Unpacking zlib1g:armel (1:1.2.11.dfsg-1+b1) ... Selecting previously unselected package zlib1g-dev:armel. Preparing to unpack .../114-zlib1g-dev_1%3a1.2.11.dfsg-1+b1_armel.deb ... Unpacking zlib1g-dev:armel (1:1.2.11.dfsg-1+b1) ... Selecting previously unselected package sbuild-build-depends-main-dummy:armel. Preparing to unpack .../115-sbuild-build-depends-main-dummy_0.invalid.0_armel.deb ... Unpacking sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libexpat1:amd64 (2.2.9-1) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up libfile-which-perl (1.23-1) ... Setting up libkeyutils1:amd64 (1.6-6) ... Setting up libpsl5:amd64 (0.20.2-2) ... Setting up binutils-arm-linux-gnueabi (2.33.1-2) ... Setting up libmagic-mgc (1:5.37-6) ... Setting up libarchive-zip-perl (1.67-1) ... Setting up libglib2.0-0:amd64 (2.62.2-3) ... No schema files found: doing nothing. Setting up libssl1.1:amd64 (1.1.1d-2) ... Setting up libprocps7:amd64 (2:3.3.15-2+b1) ... Setting up libdebhelper-perl (12.7.1) ... Setting up libbrotli1:amd64 (1.0.7-5+b1) ... Setting up libnghttp2-14:amd64 (1.39.2-1) ... Setting up libmagic1:amd64 (1:5.37-6) ... Setting up linux-libc-dev:armel (5.3.9-2) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.37-6) ... Setting up libldap-common (2.4.48+dfsg-1) ... Setting up libyaml-perl (1.29-1) ... Setting up libicu63:amd64 (63.2-2) ... Setting up libkrb5support0:amd64 (1.17-6) ... Setting up linux-libc-dev-armel-cross (5.2.9-2cross7) ... Setting up libseqan2-dev (2.4.0+dfsg-11) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-1) ... Setting up gcc-9-arm-linux-gnueabi-base:amd64 (9.2.1-19cross1) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3) ... Setting up libuv1:amd64 (1.33.1-2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b1) ... Setting up libncurses6:amd64 (6.1+20191019-1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up cpp-9-arm-linux-gnueabi (9.2.1-19cross1) ... Setting up autopoint (0.19.8.1-9) ... Setting up gcc-9-cross-base (9.2.1-19cross1) ... Setting up libk5crypto3:amd64 (1.17-6) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-1) ... Setting up libc6-armel-cross (2.29-1cross7) ... Setting up sensible-utils (0.0.12) ... Setting up librhash0:amd64 (1.3.8-1) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up procps (2:3.3.15-2+b1) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode Setting up libsub-override-perl (0.09-2) ... Setting up libssh2-1:amd64 (1.8.0-2.1) ... Setting up cmake-data (3.15.4-1) ... Setting up libkrb5-3:amd64 (1.17-6) ... Setting up libc6-dev-armel-cross (2.29-1cross7) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up openssl (1.1.1d-2) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b4) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up libjsoncpp1:amd64 (1.7.4-3+b1) ... Setting up gcc-9-base:armel (9.2.1-19) ... Setting up libfile-stripnondeterminism-perl (1.6.2-1) ... Setting up libgomp1-armel-cross (9.2.1-19cross1) ... Setting up libtool (2.4.6-11) ... Setting up libarchive13:amd64 (3.4.0-1+b1) ... Setting up libldap-2.4-2:amd64 (2.4.48+dfsg-1+b2) ... Setting up m4 (1.4.18-4) ... Setting up libatomic1-armel-cross (9.2.1-19cross1) ... Setting up libgcc1-armel-cross (1:9.2.1-19cross1) ... Setting up libasan5-armel-cross (9.2.1-19cross1) ... Setting up cpp-arm-linux-gnueabi (4:9.2.1-3.1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:amd64 (1.17-6) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0038+nmu1) ... Setting up autoconf (2.69-11) ... Setting up dh-strip-nondeterminism (1.6.2-1) ... Setting up dwz (0.13-2) ... Setting up groff-base (1.22.4-3) ... Setting up libcurl4:amd64 (7.66.0-1+b1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-9) ... Setting up libstdc++6-armel-cross (9.2.1-19cross1) ... Setting up man-db (2.9.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libubsan1-armel-cross (9.2.1-19cross1) ... Setting up libgcc-9-dev-armel-cross (9.2.1-19cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up cmake (3.15.4-1) ... Setting up po-debconf (1.0.21) ... Setting up libstdc++-9-dev-armel-cross (9.2.1-19cross1) ... Setting up gcc-9-arm-linux-gnueabi (9.2.1-19cross1) ... Setting up g++-9-arm-linux-gnueabi (9.2.1-19cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up gcc-arm-linux-gnueabi (4:9.2.1-3.1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up g++-arm-linux-gnueabi (4:9.2.1-3.1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-armel (12.8) ... Setting up libgcc1:armel (1:9.2.1-19) ... Setting up libc6:armel (2.29-3) ... Setting up libc6-dev:armel (2.29-3) ... Setting up libbz2-1.0:armel (1.0.8-2) ... Setting up libstdc++6:armel (9.2.1-19) ... Setting up libbz2-dev:armel (1.0.8-2) ... Setting up debhelper (12.7.1) ... Setting up zlib1g:armel (1:1.2.11.dfsg-1+b1) ... Setting up libgomp1:armel (9.2.1-19) ... Setting up dh-autoreconf (19) ... Setting up libasan5:armel (9.2.1-19) ... Setting up libatomic1:armel (9.2.1-19) ... Setting up libubsan1:armel (9.2.1-19) ... Setting up zlib1g-dev:armel (1:1.2.11.dfsg-1+b1) ... Setting up libgcc-9-dev:armel (9.2.1-19) ... Setting up libstdc++-9-dev:armel (9.2.1-19) ... Setting up sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Processing triggers for libc-bin (2.29-3) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armel included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 #1 SMP Debian 4.9.144-3.1 (2019-02-19) amd64 (x86_64) Toolchain package versions: binutils_2.33.1-2 dpkg-dev_1.19.7 g++-8_8.3.0-24 g++-9_9.2.1-19 gcc-8_8.3.0-24 gcc-9_9.2.1-19 libc6-dev_2.29-3 libstdc++-8-dev_8.3.0-24 libstdc++-9-dev_9.2.1-19 libstdc++-9-dev-armel-cross_9.2.1-19cross1 libstdc++6_9.2.1-19 libstdc++6-armel-cross_9.2.1-19cross1 linux-libc-dev_5.3.9-2 Package versions: adduser_3.118 apt_1.8.4 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.46 bash_5.0-5 binutils_2.33.1-2 binutils-arm-linux-gnueabi_2.33.1-2 binutils-common_2.33.1-2 binutils-x86-64-linux-gnu_2.33.1-2 bsdmainutils_11.1.2+b1 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 cmake_3.15.4-1 cmake-data_3.15.4-1 coreutils_8.30-3+b1 cpp_4:9.2.1-3.1 cpp-8_8.3.0-24 cpp-9_9.2.1-19 cpp-9-arm-linux-gnueabi_9.2.1-19cross1 cpp-arm-linux-gnueabi_4:9.2.1-3.1 cross-config_2.6.15-3 crossbuild-essential-armel_12.8 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.7.1 debian-archive-keyring_2019.1 debianutils_4.9 dh-autoreconf_19 dh-strip-nondeterminism_1.6.2-1 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.13-2 e2fsprogs_1.45.4-1 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.37-6 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-8_8.3.0-24 g++-9_9.2.1-19 g++-9-arm-linux-gnueabi_9.2.1-19cross1 g++-arm-linux-gnueabi_4:9.2.1-3.1 gcc_4:9.2.1-3.1 gcc-8_8.3.0-24 gcc-8-base_8.3.0-24 gcc-9_9.2.1-19 gcc-9-arm-linux-gnueabi_9.2.1-19cross1 gcc-9-arm-linux-gnueabi-base_9.2.1-19cross1 gcc-9-base_9.2.1-19 gcc-9-cross-base_9.2.1-19cross1 gcc-arm-linux-gnueabi_4:9.2.1-3.1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.17-3 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3+b1 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-5 libapt-pkg5.0_1.8.4 libarchive-zip-perl_1.67-1 libarchive13_3.4.0-1+b1 libasan5_9.2.1-19 libasan5-armel-cross_9.2.1-19cross1 libatomic1_9.2.1-19 libatomic1-armel-cross_9.2.1-19cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2+b1 libbinutils_2.33.1-2 libblkid1_2.34-0.1 libbrotli1_1.0.7-5+b1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libbz2-dev_1.0.8-2 libc-bin_2.29-3 libc-dev-bin_2.29-3 libc6_2.29-3 libc6-armel-cross_2.29-1cross7 libc6-dev_2.29-3 libc6-dev-armel-cross_2.29-1cross7 libcap-ng0_0.7.9-2.1+b1 libcc1-0_9.2.1-19 libcom-err2_1.45.4-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.13-1 libcurl4_7.66.0-1+b1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.250 libdebhelper-perl_12.7.1 libdebian-dpkgcross-perl_2.6.15-3 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libexpat1_2.2.9-1 libext2fs2_1.45.4-1 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.6.2-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-24 libgcc-9-dev_9.2.1-19 libgcc-9-dev-armel-cross_9.2.1-19cross1 libgcc1_1:9.2.1-19 libgcc1-armel-cross_1:9.2.1-19cross1 libgcrypt20_1.8.5-3 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.62.2-3 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.10-5 libgomp1_9.2.1-19 libgomp1-armel-cross_9.2.1-19cross1 libgpg-error0_1.36-7 libgssapi-krb5-2_1.17-6 libhogweed4_3.5.1+really3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libicu63_63.2-2 libidn2-0_2.2.0-2 libio-string-perl_1.08-3 libisl19_0.20-2 libisl21_0.21-2 libitm1_9.2.1-19 libjsoncpp1_1.7.4-3+b1 libk5crypto3_1.17-6 libkeyutils1_1.6-6 libkrb5-3_1.17-6 libkrb5support0_1.17-6 libldap-2.4-2_2.4.48+dfsg-1+b2 libldap-common_2.4.48+dfsg-1 liblocale-gettext-perl_1.07-4 liblsan0_9.2.1-19 liblz4-1_1.9.2-2 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.37-6 libmagic1_1:5.37-6 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-24 libncurses6_6.1+20191019-1 libncursesw6_6.1+20191019-1 libnettle6_3.5.1+really3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.39.2-1 libp11-kit0_0.23.18.1-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.32-5+b1 libpcre3_2:8.39-12+b1 libperl5.28_5.28.1-6 libperl5.30_5.30.0-9 libpipeline1_1.5.1-2 libprocps7_2:3.3.15-2+b1 libpsl5_0.20.2-2 libquadmath0_9.2.1-19 librhash0_1.3.8-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b1 libsasl2-2_2.1.27+dfsg-1 libsasl2-modules-db_2.1.27+dfsg-1 libseccomp2_2.4.2-2 libselinux1_2.9-3+b1 libsemanage-common_2.9-3 libsemanage1_2.9-3+b1 libsepol1_2.9-2+b2 libseqan2-dev_2.4.0+dfsg-11 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libss2_1.45.4-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1d-2 libstdc++-8-dev_8.3.0-24 libstdc++-9-dev_9.2.1-19 libstdc++-9-dev-armel-cross_9.2.1-19cross1 libstdc++6_9.2.1-19 libstdc++6-armel-cross_9.2.1-19cross1 libsub-override-perl_0.09-2 libsystemd0_243-7 libtasn1-6_4.14-3 libtinfo6_6.1+20191019-1 libtool_2.4.6-11 libtsan0_9.2.1-19 libubsan1_9.2.1-19 libubsan1-armel-cross_9.2.1-19cross1 libuchardet0_0.0.6-3 libudev1_243-7 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libuv1_1.33.1-2 libxml-libxml-perl_2.0134+dfsg-1+b1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b4 libyaml-perl_1.29-1 libzstd1_1.4.4+dfsg-1 linux-libc-dev_5.3.9-2 linux-libc-dev-armel-cross_5.2.9-2cross7 login_1:4.7-2 logsave_1.45.4-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-1 mawk_1.3.3-17+b3 mount_2.34-0.1 ncurses-base_6.1+20191019-1 ncurses-bin_6.1+20191019-1 openssl_1.1.1d-2 passwd_1:4.7-2 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.0-9 po-debconf_1.0.21 procps_2:3.3.15-2+b1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.96-1 tar_1.30+dfsg-6+b1 tzdata_2019c-3 ucf_3.0038+nmu1 util-linux_2.34-0.1 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-1+b1 zlib1g-dev_1:1.2.11.dfsg-1+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: lambda-align Binary: lambda-align Architecture: any Version: 1.0.3-5 Maintainer: Debian Med Packaging Team Uploaders: Sascha Steinbiss , Michael R. Crusoe Homepage: https://seqan.github.io/lambda Standards-Version: 4.3.0 Vcs-Browser: https://salsa.debian.org/med-team/lambda-align Vcs-Git: https://salsa.debian.org/med-team/lambda-align.git Testsuite: autopkgtest Testsuite-Triggers: coreutils, diffutils, gzip, openssl Build-Depends: debhelper (>= 12~), libseqan2-dev, cmake, zlib1g-dev, libbz2-dev, openssl Package-List: lambda-align deb science optional arch=any Checksums-Sha1: abf40a7204b2c249152a7e4275c6adb3628fe8cf 322730 lambda-align_1.0.3.orig.tar.gz 3d1494d05d9b636e0fe9046c4e7891666453a028 8000 lambda-align_1.0.3-5.debian.tar.xz Checksums-Sha256: 324f90dbc095c56792a77a002e64a98465a4853f74a141a1182e7a6f540545a2 322730 lambda-align_1.0.3.orig.tar.gz 5db2098646286b937e5854441123fd65b15e2c0f8741b94a8ac3f017f6968fcb 8000 lambda-align_1.0.3-5.debian.tar.xz Files: b18d7c968b8c52851c8037dfc8066bce 322730 lambda-align_1.0.3.orig.tar.gz 5881f150506f45b2677ce5dc7dbf0e16 8000 lambda-align_1.0.3-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlxG7uoRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEFjQ/+NkpLTn4rw4oFK3uIHb4gHD6kcT62h1mp 32CSwigVennEdeuLzX37/MJCwk/NXvmtZ1u/sRZVo5RM47icfNHLxsVeJQR/wilv styo6LckFCSbsg5sbXby+CP4lAs3NpprV37VZD9jSlZ8ZLmYLc24XCYrIE7vMLJZ pDAqQltcfovgcLudllDiWmoPnYxkg62QnPMWN/WVBN/VIL/rfCbsOO2j5zcJvA6N +MkE9gHWDtzaoxZBWWW5n+sZAetLqxmj/e8YGfEJBvFOBeC3sVqK+HypNNeNTR8+ w285VDN9kaTt6yebhiUA7acAS5gFsyPZFPp8FnFa9P9levcbUlgptvH2kzSl8BiW reXTqApDL9zjsFlCnabQu6N9t201kLczh+m9FxYS00zTFuQ4rC8ufqK6mxNkDmzk sUhD1Wtt/ADDeO93jgCHof8oQYjPwP5wJIQp297Dq7AVlV+89/8+sYgeq+3QWO1b 7hEwjc8l2tAS6Udfm57BSLpdgGyMdsBDyoKHzHFjZP9EdQd+dmaUHeplJeKGx7Ve 3UE/jKJivvUkzU8vpxjfo6ghTbW4ak0UJltoQi+R9/LXpQyd0czF8Gl9yJq39+t6 WZXi5nvSJB6D0GNaphrVF7EXB1nshiwyg76TdT+4iW6WYA1pKdwU7IEoKitV8QQV kF42ZFz/6iM= =IFAy -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Tue Jan 22 10:22:34 2019 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./lambda-align_1.0.3-5.dsc dpkg-source: info: extracting lambda-align in /<> dpkg-source: info: unpacking lambda-align_1.0.3.orig.tar.gz dpkg-source: info: unpacking lambda-align_1.0.3-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying set-seqan-cmake-dir.patch dpkg-source: info: applying force-link-rt-pthread.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-948ae5e5-5c7f-4bf5-83a7-08f57bd6c40d SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarmel -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package lambda-align dpkg-buildpackage: info: source version 1.0.3-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabi does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armel fakeroot debian/rules clean dh clean --builddirectory=build debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' rm -f *.1 dh_auto_clean -- make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--builddirectory=build dh_clean -O--builddirectory=build debian/rules build-arch dh build-arch --builddirectory=build dh_update_autotools_config -a -O--builddirectory=build dh_autoreconf -a -O--builddirectory=build debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- -DLAMBDA_NATIVE_BUILD=OFF -DLAMBDA_MMAPPED_DB=ON -DCMAKE_BUILD_TYPE=RelWithDebInfo cd build && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=armv7l -DCMAKE_C_COMPILER=arm-linux-gnueabi-gcc -DCMAKE_CXX_COMPILER=arm-linux-gnueabi-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/arm-linux-gnueabi-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/arm-linux-gnueabi-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/arm-linux-gnueabi-qmake -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabi -DLAMBDA_NATIVE_BUILD=OFF -DLAMBDA_MMAPPED_DB=ON -DCMAKE_BUILD_TYPE=RelWithDebInfo .. Compiler Detection -- The CXX compiler identification is GNU 9.2.1 -- Check for working CXX compiler: /usr/bin/arm-linux-gnueabi-g++ -- Check for working CXX compiler: /usr/bin/arm-linux-gnueabi-g++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done Dependency detection -- These dependencies where found: OPENMP TRUE -fopenmp ZLIB TRUE 1.2.11 BZIP2 TRUE 1.0.8 SEQAN TRUE 2.4.0 -- The requirements where met. Build configuration -- LAMBDA version is: 1.0.2 -- The following options are selected for the build: LAMBDA_FASTBUILD OFF LAMBDA_LINGAPS_OPT OFF LAMBDA_MMAPPED_DB ON LAMBDA_NATIVE_BUILD OFF LAMBDA_STATIC_BUILD OFF -- Run 'cmake -LH' to get a comment on each option. -- Remove CMakeCache.txt and re-run cmake with -DOPTIONNAME=ON|OFF to change an option. -- CMAKE_BUILD_TYPE is not "Release", your binaries will be slow. Setting up unit tests -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_COMPILER CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR PKGCONFIG_EXECUTABLE PKG_CONFIG_EXECUTABLE QMAKE_EXECUTABLE -- Build files have been written to: /<>/build make[1]: Leaving directory '/<>' dh_auto_build -a -O--builddirectory=build cd build && make -j1 "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/build' /usr/bin/cmake -S/<> -B/<>/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/CMakeFiles /<>/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/build' make -f src/CMakeFiles/lambda.dir/build.make src/CMakeFiles/lambda.dir/depend make[3]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/build /<>/build/src /<>/build/src/CMakeFiles/lambda.dir/DependInfo.cmake --color= Scanning dependencies of target lambda make[3]: Leaving directory '/<>/build' make -f src/CMakeFiles/lambda.dir/build.make src/CMakeFiles/lambda.dir/build make[3]: Entering directory '/<>/build' [ 25%] Building CXX object src/CMakeFiles/lambda.dir/lambda.cpp.o cd /<>/build/src && /usr/bin/arm-linux-gnueabi-g++ -DCMAKE_BUILD_TYPE=\"RelWithDebInfo\" -DLAMBDA_MMAPPED_DB=1 -DSEQAN_APP_VERSION=\"1.0.2\" -DSEQAN_DATE=\"\" -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP="1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER" -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"\" -DSEQAN_VERSION_STRING=\"2.4.0\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fno-omit-frame-pointer -fopenmp -Wno-vla -flto=32 -O2 -g -DNDEBUG -o CMakeFiles/lambda.dir/lambda.cpp.o -c /<>/src/lambda.cpp In file included from /<>/src/lambda.cpp:32: /<>/src/options.hpp:323:21: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 323 | setDate(parser, __DATE__); | ^~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]’ /<>/src/lambda.cpp:168:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]’ /<>/src/lambda.cpp:168:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]’ /<>/src/lambda.cpp:168:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]’ /<>/src/lambda.cpp:168:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]’ /<>/src/lambda.cpp:168:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]’ /<>/src/lambda.cpp:168:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:175:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:175:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:175:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:175:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:180:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:180:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:180:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:180:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:186:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:186:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:186:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:186:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:191:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:191:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:191:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:191:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:175:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:175:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:175:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:175:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:180:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:180:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:180:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:180:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:186:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:186:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:186:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:186:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:191:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:191:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:191:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:191:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:175:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:175:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:175:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]’ /<>/src/lambda.cpp:175:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:180:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:180:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:180:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]’ /<>/src/lambda.cpp:180:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:186:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:186:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:186:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]’ /<>/src/lambda.cpp:186:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:191:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:219:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:191:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:316:35: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:191:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of ‘int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]’: /<>/src/lambda.hpp:1513:45: required from ‘int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]’ /<>/src/lambda.cpp:462:33: required from ‘int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:323:36: required from ‘int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:266:24: required from ‘int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:221:28: required from ‘int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]’ /<>/src/lambda.cpp:191:28: required from ‘int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: ‘double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]’ is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:32: /<>/src/options.hpp: In function ‘void getCwd(TString&) [with TString = std::__cxx11::basic_string]’: /<>/src/options.hpp:173:11: warning: ignoring return value of ‘char* getcwd(char*, size_t)’, declared with attribute warn_unused_result [-Wunused-result] 173 | getcwd(cwd, 1000); | ~~~~~~^~~~~~~~~~~ [ 50%] Linking CXX executable ../bin/lambda cd /<>/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/lambda.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fno-omit-frame-pointer -fopenmp -Wno-vla -flto=32 -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/lambda.dir/lambda.cpp.o -o ../bin/lambda -lrt -lz -lbz2 -lrt -lpthread -lz -lbz2 -lpthread make[3]: Leaving directory '/<>/build' [ 50%] Built target lambda make -f src/CMakeFiles/lambda_indexer.dir/build.make src/CMakeFiles/lambda_indexer.dir/depend make[3]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/build /<>/build/src /<>/build/src/CMakeFiles/lambda_indexer.dir/DependInfo.cmake --color= Scanning dependencies of target lambda_indexer make[3]: Leaving directory '/<>/build' make -f src/CMakeFiles/lambda_indexer.dir/build.make src/CMakeFiles/lambda_indexer.dir/build make[3]: Entering directory '/<>/build' [ 75%] Building CXX object src/CMakeFiles/lambda_indexer.dir/lambda_indexer.cpp.o cd /<>/build/src && /usr/bin/arm-linux-gnueabi-g++ -DCMAKE_BUILD_TYPE=\"RelWithDebInfo\" -DLAMBDA_MMAPPED_DB=1 -DSEQAN_APP_VERSION=\"1.0.2\" -DSEQAN_DATE=\"\" -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP="1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER" -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"\" -DSEQAN_VERSION_STRING=\"2.4.0\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fno-omit-frame-pointer -fopenmp -Wno-vla -flto=32 -O2 -g -DNDEBUG -o CMakeFiles/lambda_indexer.dir/lambda_indexer.cpp.o -c /<>/src/lambda_indexer.cpp In file included from /<>/src/misc.hpp:34, from /<>/src/lambda_indexer.hpp:35, from /<>/src/lambda_indexer.cpp:31: /<>/src/options.hpp:323:21: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 323 | setDate(parser, __DATE__); | ^~~~~~~~ /<>/src/options.hpp: In function ‘void getCwd(TString&) [with TString = std::__cxx11::basic_string]’: /<>/src/options.hpp:173:11: warning: ignoring return value of ‘char* getcwd(char*, size_t)’, declared with attribute warn_unused_result [-Wunused-result] 173 | getcwd(cwd, 1000); | ~~~~~~^~~~~~~~~~~ [100%] Linking CXX executable ../bin/lambda_indexer cd /<>/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/lambda_indexer.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fno-omit-frame-pointer -fopenmp -Wno-vla -flto=32 -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/lambda_indexer.dir/lambda_indexer.cpp.o -o ../bin/lambda_indexer -lrt -lz -lbz2 -lrt -lpthread -lz -lbz2 -lpthread make[3]: Leaving directory '/<>/build' [100%] Built target lambda_indexer make[2]: Leaving directory '/<>/build' /usr/bin/cmake -E cmake_progress_start /<>/build/CMakeFiles 0 make[1]: Leaving directory '/<>/build' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --builddirectory=build dh_testroot -a -O--builddirectory=build dh_prep -a -O--builddirectory=build dh_auto_install -a -O--builddirectory=build cd build && make -j1 install DESTDIR=/<>/debian/lambda-align AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/build' /usr/bin/cmake -S/<> -B/<>/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/CMakeFiles /<>/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/build' make -f src/CMakeFiles/lambda.dir/build.make src/CMakeFiles/lambda.dir/depend make[3]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/build /<>/build/src /<>/build/src/CMakeFiles/lambda.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build' make -f src/CMakeFiles/lambda.dir/build.make src/CMakeFiles/lambda.dir/build make[3]: Entering directory '/<>/build' make[3]: Nothing to be done for 'src/CMakeFiles/lambda.dir/build'. make[3]: Leaving directory '/<>/build' [ 50%] Built target lambda make -f src/CMakeFiles/lambda_indexer.dir/build.make src/CMakeFiles/lambda_indexer.dir/depend make[3]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/build /<>/build/src /<>/build/src/CMakeFiles/lambda_indexer.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build' make -f src/CMakeFiles/lambda_indexer.dir/build.make src/CMakeFiles/lambda_indexer.dir/build make[3]: Entering directory '/<>/build' make[3]: Nothing to be done for 'src/CMakeFiles/lambda_indexer.dir/build'. make[3]: Leaving directory '/<>/build' [100%] Built target lambda_indexer make[2]: Leaving directory '/<>/build' /usr/bin/cmake -E cmake_progress_start /<>/build/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/build' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Installing: /<>/debian/lambda-align/usr/bin/lambda -- Installing: /<>/debian/lambda-align/usr/bin/lambda_indexer -- Installing: /<>/debian/lambda-align/usr/share/doc/lambda/LICENSE.rst -- Installing: /<>/debian/lambda-align/usr/share/doc/lambda/LICENSE-BSD.rst -- Installing: /<>/debian/lambda-align/usr/share/doc/lambda/LICENSE-GPL3.rst -- Installing: /<>/debian/lambda-align/usr/share/doc/lambda/README.rst make[1]: Leaving directory '/<>/build' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install find debian -name "LICENSE*.rst" -delete make[1]: Leaving directory '/<>' dh_installdocs -a -O--builddirectory=build dh_installchangelogs -a -O--builddirectory=build debian/rules override_dh_installman make[1]: Entering directory '/<>' ./build/bin/lambda --export-help man \ | sed -r 's/(number of threads.*) Default:.*/\1/g' \ | sed -r 's/\(Git commit +\)//g' > lambda.1 /bin/sh: 1: ./build/bin/lambda: Exec format error ./build/bin/lambda_indexer --export-help man \ | sed -r 's/(number of threads.*) Default:.*/\1/g' \ | sed -r 's/(defaults to working directory.*) Default:.*/\1/g' \ | sed -r 's/\(Git commit +\)//g' > lambda_indexer.1 /bin/sh: 1: ./build/bin/lambda_indexer: Exec format error dh_installman -- make[1]: Leaving directory '/<>' dh_installinit -a -O--builddirectory=build dh_installsystemduser -a -O--builddirectory=build dh_perl -a -O--builddirectory=build dh_perl: /usr/lib/arm-linux-gnueabi/perl/cross-config-5.30.0/Config.pm does not exist (missing build dependency on perl-xs-dev?) dh_link -a -O--builddirectory=build dh_strip_nondeterminism -a -O--builddirectory=build dh_compress -a -O--builddirectory=build dh_fixperms -a -O--builddirectory=build dh_missing -a -O--builddirectory=build dh_dwz -a -O--builddirectory=build dh_strip -a -O--builddirectory=build dh_makeshlibs -a -O--builddirectory=build dh_shlibdeps -a -O--builddirectory=build dpkg-shlibdeps: warning: debian/lambda-align/usr/bin/lambda_indexer contains an unresolvable reference to symbol __aeabi_atexit@GLIBC_2.4: it's probably a plugin dpkg-shlibdeps: warning: debian/lambda-align/usr/bin/lambda contains an unresolvable reference to symbol __aeabi_atexit@GLIBC_2.4: it's probably a plugin dh_installdeb -a -O--builddirectory=build dh_gencontrol -a -O--builddirectory=build dh_md5sums -a -O--builddirectory=build dh_builddeb -a -O--builddirectory=build dpkg-deb: building package 'lambda-align' in '../lambda-align_1.0.3-5_armel.deb'. dpkg-deb: building package 'lambda-align-dbgsym' in '../lambda-align-dbgsym_1.0.3-5_armel.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../lambda-align_1.0.3-5_armel.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-11-18T12:32:53Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ lambda-align_1.0.3-5_armel.changes: ----------------------------------- Format: 1.8 Date: Tue, 22 Jan 2019 11:12:44 +0100 Source: lambda-align Binary: lambda-align lambda-align-dbgsym Built-For-Profiles: cross nocheck Architecture: armel Version: 1.0.3-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: lambda-align - Local Aligner for Massive Biological DatA Changes: lambda-align (1.0.3-5) unstable; urgency=medium . * Team upload. * Watch file reports only version 1 * Document choice of version 1 in README.Debian * debhelper 12 * CMAKE_BUILD_TYPE=RelWithDebInfo to get debug info Checksums-Sha1: 16b6ff3706d73ee034ee1a864a5372072c408161 17883236 lambda-align-dbgsym_1.0.3-5_armel.deb aa5006fd3ef77ace9bc9cfff81d6672c75b041c6 5759 lambda-align_1.0.3-5_armel.buildinfo c19318b4f3312f6b97dad96b1960fbc06af08543 1008080 lambda-align_1.0.3-5_armel.deb Checksums-Sha256: 23c4c5fbee4b4f6ac5e568fcce3c77de2db14bf4ec3189786d1e0f689c55ec96 17883236 lambda-align-dbgsym_1.0.3-5_armel.deb bad8f54c4da0d9d74e0f05a14794626fd7d5bf17ab6a28fbeb2eff39ceb0b626 5759 lambda-align_1.0.3-5_armel.buildinfo 08e8a095d4328a517a306262b11a4bd9b566960730726164276744dfef247809 1008080 lambda-align_1.0.3-5_armel.deb Files: 8bdea682e4880840d6959abf6e195fc9 17883236 debug optional lambda-align-dbgsym_1.0.3-5_armel.deb 46d08115459d88e8233dc9c5ee85a098 5759 science optional lambda-align_1.0.3-5_armel.buildinfo bf7222d446f55ee3841e6cd5e10f8bc1 1008080 science optional lambda-align_1.0.3-5_armel.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: lambda-align Binary: lambda-align Architecture: armel Version: 1.0.3-5 Checksums-Md5: 8bdea682e4880840d6959abf6e195fc9 17883236 lambda-align-dbgsym_1.0.3-5_armel.deb bf7222d446f55ee3841e6cd5e10f8bc1 1008080 lambda-align_1.0.3-5_armel.deb Checksums-Sha1: 16b6ff3706d73ee034ee1a864a5372072c408161 17883236 lambda-align-dbgsym_1.0.3-5_armel.deb c19318b4f3312f6b97dad96b1960fbc06af08543 1008080 lambda-align_1.0.3-5_armel.deb Checksums-Sha256: 23c4c5fbee4b4f6ac5e568fcce3c77de2db14bf4ec3189786d1e0f689c55ec96 17883236 lambda-align-dbgsym_1.0.3-5_armel.deb 08e8a095d4328a517a306262b11a4bd9b566960730726164276744dfef247809 1008080 lambda-align_1.0.3-5_armel.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Mon, 18 Nov 2019 12:32:52 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.46), bash (= 5.0-5), binutils (= 2.33.1-2), binutils-common (= 2.33.1-2), binutils-x86-64-linux-gnu (= 2.33.1-2), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.34-0.1), build-essential (= 12.8), bzip2 (= 1.0.8-2), cmake (= 3.15.4-1), cmake-data (= 3.15.4-1), coreutils (= 8.30-3+b1), cpp (= 4:9.2.1-3.1), cpp-8 (= 8.3.0-24), cpp-9 (= 9.2.1-19), dash (= 0.5.10.2-6), debconf (= 1.5.73), debhelper (= 12.7.1), debianutils (= 4.9), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.6.2-1), diffutils (= 1:3.7-3), dpkg (= 1.19.7), dpkg-dev (= 1.19.7), dwz (= 0.13-2), fdisk (= 2.34-0.1), file (= 1:5.37-6), findutils (= 4.7.0-1), g++ (= 4:9.2.1-3.1), g++-9 (= 9.2.1-19), gcc (= 4:9.2.1-3.1), gcc-8 (= 8.3.0-24), gcc-8-base (= 8.3.0-24), gcc-9 (= 9.2.1-19), gcc-9-base (= 9.2.1-19), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), grep (= 3.3-1), groff-base (= 1.22.4-3), gzip (= 1.9-3+b1), hostname (= 3.23), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-5), libarchive-zip-perl (= 1.67-1), libarchive13 (= 3.4.0-1+b1), libasan5 (= 9.2.1-19), libatomic1 (= 9.2.1-19), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-2), libaudit1 (= 1:2.8.5-2+b1), libbinutils (= 2.33.1-2), libblkid1 (= 2.34-0.1), libbrotli1 (= 1.0.7-5+b1), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.8-2), libbz2-dev (= 1.0.8-2), libc-bin (= 2.29-3), libc-dev-bin (= 2.29-3), libc6 (= 2.29-3), libc6-dev (= 2.29-3), libcap-ng0 (= 0.7.9-2.1+b1), libcc1-0 (= 9.2.1-19), libcom-err2 (= 1.45.4-1), libcroco3 (= 0.6.13-1), libcurl4 (= 7.66.0-1+b1), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.250), libdebhelper-perl (= 12.7.1), libdpkg-perl (= 1.19.7), libelf1 (= 0.176-1.1), libexpat1 (= 2.2.9-1), libfdisk1 (= 2.34-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.6.2-1), libgcc-8-dev (= 8.3.0-24), libgcc-9-dev (= 9.2.1-19), libgcc1 (= 1:9.2.1-19), libgcrypt20 (= 1.8.5-3), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libglib2.0-0 (= 2.62.2-3), libgmp10 (= 2:6.1.2+dfsg-4), libgnutls30 (= 3.6.10-5), libgomp1 (= 9.2.1-19), libgpg-error0 (= 1.36-7), libgssapi-krb5-2 (= 1.17-6), libhogweed5 (= 3.5.1+really3.5.1-2), libicu63 (= 63.2-2), libidn2-0 (= 2.2.0-2), libisl21 (= 0.21-2), libitm1 (= 9.2.1-19), libjsoncpp1 (= 1.7.4-3+b1), libk5crypto3 (= 1.17-6), libkeyutils1 (= 1.6-6), libkrb5-3 (= 1.17-6), libkrb5support0 (= 1.17-6), libldap-2.4-2 (= 2.4.48+dfsg-1+b2), libldap-common (= 2.4.48+dfsg-1), liblsan0 (= 9.2.1-19), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.37-6), libmagic1 (= 1:5.37-6), libmount1 (= 2.34-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-24), libncurses6 (= 6.1+20191019-1), libncursesw6 (= 6.1+20191019-1), libnettle7 (= 3.5.1+really3.5.1-2), libnghttp2-14 (= 1.39.2-1), libp11-kit0 (= 0.23.18.1-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.32-5+b1), libpcre3 (= 2:8.39-12+b1), libperl5.30 (= 5.30.0-9), libpipeline1 (= 1.5.1-2), libprocps7 (= 2:3.3.15-2+b1), libpsl5 (= 0.20.2-2), libquadmath0 (= 9.2.1-19), librhash0 (= 1.3.8-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b1), libsasl2-2 (= 2.1.27+dfsg-1), libsasl2-modules-db (= 2.1.27+dfsg-1), libseccomp2 (= 2.4.2-2), libselinux1 (= 2.9-3+b1), libseqan2-dev (= 2.4.0+dfsg-11), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.34-0.1), libssh2-1 (= 1.8.0-2.1), libssl1.1 (= 1.1.1d-2), libstdc++-9-dev (= 9.2.1-19), libstdc++6 (= 9.2.1-19), libsub-override-perl (= 0.09-2), libsystemd0 (= 243-7), libtasn1-6 (= 4.14-3), libtinfo6 (= 6.1+20191019-1), libtool (= 2.4.6-11), libtsan0 (= 9.2.1-19), libubsan1 (= 9.2.1-19), libuchardet0 (= 0.0.6-3), libudev1 (= 243-7), libunistring2 (= 0.9.10-2), libuuid1 (= 2.34-0.1), libuv1 (= 1.33.1-2), libxml2 (= 2.9.4+dfsg1-7+b4), libzstd1 (= 1.4.4+dfsg-1), linux-libc-dev (= 5.3.9-2), login (= 1:4.7-2), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.2.1-1.2), man-db (= 2.9.0-1), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20191019-1), ncurses-bin (= 6.1+20191019-1), openssl (= 1.1.1d-2), patch (= 2.7.6-6), perl (= 5.30.0-9), perl-base (= 5.30.0-9), perl-modules-5.30 (= 5.30.0-9), po-debconf (= 1.0.21), procps (= 2:3.3.15-2+b1), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.96-1), tar (= 1.30+dfsg-6+b1), util-linux (= 2.34-0.1), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-1+b1), zlib1g-dev (= 1:1.2.11.dfsg-1+b1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1548151964" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ lambda-align-dbgsym_1.0.3-5_armel.deb ------------------------------------- new Debian package, version 2.0. size 17883236 bytes: control archive=648 bytes. 433 bytes, 12 lines control 302 bytes, 3 lines md5sums Package: lambda-align-dbgsym Source: lambda-align Version: 1.0.3-5 Auto-Built-Package: debug-symbols Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 19727 Depends: lambda-align (= 1.0.3-5) Section: debug Priority: optional Description: debug symbols for lambda-align Build-Ids: 28c5a896640a78ea23f522c54caa8fc7046702fd 948f58097cb59f70fc073fb6caf7314b6649fe78 drwxr-xr-x root/root 0 2019-01-22 10:12 ./ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/lib/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/lib/debug/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/lib/debug/.build-id/28/ -rw-r--r-- root/root 13342328 2019-01-22 10:12 ./usr/lib/debug/.build-id/28/c5a896640a78ea23f522c54caa8fc7046702fd.debug drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/lib/debug/.build-id/94/ -rw-r--r-- root/root 6078048 2019-01-22 10:12 ./usr/lib/debug/.build-id/94/8f58097cb59f70fc073fb6caf7314b6649fe78.debug drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/lib/debug/.dwz/arm-linux-gnueabi/ -rw-r--r-- root/root 765288 2019-01-22 10:12 ./usr/lib/debug/.dwz/arm-linux-gnueabi/lambda-align.debug drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/share/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/share/doc/ lrwxrwxrwx root/root 0 2019-01-22 10:12 ./usr/share/doc/lambda-align-dbgsym -> lambda-align lambda-align_1.0.3-5_armel.deb ------------------------------ new Debian package, version 2.0. size 1008080 bytes: control archive=1008 bytes. 798 bytes, 16 lines control 540 bytes, 8 lines md5sums Package: lambda-align Version: 1.0.3-5 Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 4343 Depends: libbz2-1.0, libc6 (>= 2.29), libgcc1 (>= 1:3.5), libgomp1 (>= 6), libstdc++6 (>= 9.2.1-19), zlib1g (>= 1:1.1.4) Suggests: cwl-runner Section: science Priority: optional Homepage: https://seqan.github.io/lambda Description: Local Aligner for Massive Biological DatA Lambda is a local biosequence aligner optimized for many query sequences and searches in protein space. It is compatible to the de facto standard tool BLAST, but often outperforms the best currently available alternatives at reproducing BLAST’s results and is the fastest compared with the current state of the art at comparable levels of sensitivity. drwxr-xr-x root/root 0 2019-01-22 10:12 ./ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/bin/ -rwxr-xr-x root/root 3070216 2019-01-22 10:12 ./usr/bin/lambda -rwxr-xr-x root/root 1353952 2019-01-22 10:12 ./usr/bin/lambda_indexer drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/share/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/share/doc/lambda-align/ -rw-r--r-- root/root 375 2019-01-22 10:12 ./usr/share/doc/lambda-align/README.Debian -rw-r--r-- root/root 1336 2019-01-22 10:12 ./usr/share/doc/lambda-align/changelog.Debian.gz -rw-r--r-- root/root 2887 2019-01-22 10:12 ./usr/share/doc/lambda-align/copyright drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/share/doc/lambda/ -rw-r--r-- root/root 2236 2018-02-16 18:56 ./usr/share/doc/lambda/README.rst.gz drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/share/man/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/share/man/man1/ -rw-r--r-- root/root 20 2019-01-22 10:12 ./usr/share/man/man1/lambda.1.gz -rw-r--r-- root/root 20 2019-01-22 10:12 ./usr/share/man/man1/lambda_indexer.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [558 B] Get:5 copy:/<>/apt_archive ./ Packages [649 B] Fetched 2170 B in 0s (115 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libdevel-callchecker-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsqlite3-0 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libdata-dump-perl ca-certificates libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libfreezethaw-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libpackage-stash-xs-perl libunicode-utf8-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libdevel-callchecker-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsqlite3-0 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:armel t1utils 0 upgraded, 74 newly installed, 0 to remove and 0 not upgraded. Need to get 7336 kB of archives. After this operation, 20.9 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-3 [72.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-3 [160 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 5.6 [19.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.62-1+b1 [33.6 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.3-7 [50.4 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.17-3 [524 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.30.1-1 [649 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.17-3 [881 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b2 [71.3 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b2 [11.3 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1 [12.6 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b1 [15.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b2 [25.6 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1 [12.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b2 [46.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.24-1 [18.6 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libberkeleydb-perl amd64 0.62-1+b1 [124 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-4 [13.0 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b4 [105 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.44-1 [223 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1 [13.5 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b3 [38.4 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.43-1 [14.9 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 3 [6782 B] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.88-2 [321 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.066-1 [210 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.21-1 [95.5 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.20-1 [367 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1 [7642 B] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.10-1 [8362 B] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.42-1 [82.6 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.74-1 [268 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 liblinux-epoll-perl amd64 0.016-1+b2 [16.9 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-loop-epoll-perl all 0.20-1 [11.9 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b6 [33.6 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-2 [101 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.53-1 [68.9 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b5 [63.6 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libmldbm-perl all 2.05-2 [18.4 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.003006-1 [58.7 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b2 [12.0 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.004004-1 [266 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.80+repack-2+b1 [34.8 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2+b1 [91.4 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.36.0 [1294 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7336 kB in 0s (29.2 MB/s) Selecting previously unselected package readline-common. (Reading database ... 24793 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.0-3_all.deb ... Unpacking readline-common (8.0-3) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.0-3_amd64.deb ... Unpacking libreadline8:amd64 (8.0-3) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_5.6_all.deb ... Unpacking netbase (5.6) ... Selecting previously unselected package diffstat. Preparing to unpack .../03-diffstat_1.62-1+b1_amd64.deb ... Unpacking diffstat (1.62-1+b1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../04-libassuan0_2.5.3-7_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.17-3_amd64.deb ... Unpacking gpgconf (2.2.17-3) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../06-libsqlite3-0_3.30.1-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.30.1-1) ... Selecting previously unselected package gpg. Preparing to unpack .../07-gpg_2.2.17-3_amd64.deb ... Unpacking gpg (2.2.17-3) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../08-libapt-pkg-perl_0.1.36+b2_amd64.deb ... Unpacking libapt-pkg-perl (0.1.36+b2) ... Selecting previously unselected package libb-hooks-op-check-perl. Preparing to unpack .../09-libb-hooks-op-check-perl_0.22-1+b2_amd64.deb ... Unpacking libb-hooks-op-check-perl (0.22-1+b2) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../10-libdynaloader-functions-perl_0.003-1_all.deb ... Unpacking libdynaloader-functions-perl (0.003-1) ... Selecting previously unselected package libdevel-callchecker-perl. Preparing to unpack .../11-libdevel-callchecker-perl_0.008-1+b1_amd64.deb ... Unpacking libdevel-callchecker-perl (0.008-1+b1) ... Selecting previously unselected package libparams-classify-perl. Preparing to unpack .../12-libparams-classify-perl_0.015-1+b2_amd64.deb ... Unpacking libparams-classify-perl (0.015-1+b2) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../13-libmodule-runtime-perl_0.016-1_all.deb ... Unpacking libmodule-runtime-perl (0.016-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../14-libtry-tiny-perl_0.30-1_all.deb ... Unpacking libtry-tiny-perl (0.30-1) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../15-libmodule-implementation-perl_0.09-1_all.deb ... Unpacking libmodule-implementation-perl (0.09-1) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../16-libsub-exporter-progressive-perl_0.001013-1_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-1) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../17-libvariable-magic-perl_0.62-1+b2_amd64.deb ... Unpacking libvariable-magic-perl (0.62-1+b2) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../18-libb-hooks-endofscope-perl_0.24-1_all.deb ... Unpacking libb-hooks-endofscope-perl (0.24-1) ... Selecting previously unselected package libberkeleydb-perl:amd64. Preparing to unpack .../19-libberkeleydb-perl_0.62-1+b1_amd64.deb ... Unpacking libberkeleydb-perl:amd64 (0.62-1+b1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../20-libcapture-tiny-perl_0.48-1_all.deb ... Unpacking libcapture-tiny-perl (0.48-1) ... Selecting previously unselected package libhtml-tagset-perl. Preparing to unpack .../21-libhtml-tagset-perl_3.20-4_all.deb ... Unpacking libhtml-tagset-perl (3.20-4) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../22-liburi-perl_1.76-1_all.deb ... Unpacking liburi-perl (1.76-1) ... Selecting previously unselected package libhtml-parser-perl. Preparing to unpack .../23-libhtml-parser-perl_3.72-3+b4_amd64.deb ... Unpacking libhtml-parser-perl (3.72-3+b4) ... Selecting previously unselected package libcgi-pm-perl. Preparing to unpack .../24-libcgi-pm-perl_4.44-1_all.deb ... Unpacking libcgi-pm-perl (4.44-1) ... Selecting previously unselected package libsub-name-perl. Preparing to unpack .../25-libsub-name-perl_0.26-1_amd64.deb ... Unpacking libsub-name-perl (0.26-1) ... Selecting previously unselected package libclass-accessor-perl. Preparing to unpack .../26-libclass-accessor-perl_0.51-1_all.deb ... Unpacking libclass-accessor-perl (0.51-1) ... Selecting previously unselected package libclass-method-modifiers-perl. Preparing to unpack .../27-libclass-method-modifiers-perl_2.13-1_all.deb ... Unpacking libclass-method-modifiers-perl (2.13-1) ... Selecting previously unselected package libclass-xsaccessor-perl. Preparing to unpack .../28-libclass-xsaccessor-perl_1.19-3+b3_amd64.deb ... Unpacking libclass-xsaccessor-perl (1.19-3+b3) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../29-libclone-perl_0.43-1_amd64.deb ... Unpacking libclone-perl (0.43-1) ... Selecting previously unselected package libdigest-hmac-perl. Preparing to unpack .../30-libdigest-hmac-perl_1.03+dfsg-2_all.deb ... Unpacking libdigest-hmac-perl (1.03+dfsg-2) ... Selecting previously unselected package perl-openssl-defaults:amd64. Preparing to unpack .../31-perl-openssl-defaults_3_amd64.deb ... Unpacking perl-openssl-defaults:amd64 (3) ... Selecting previously unselected package libnet-ssleay-perl. Preparing to unpack .../32-libnet-ssleay-perl_1.88-2_amd64.deb ... Unpacking libnet-ssleay-perl (1.88-2) ... Selecting previously unselected package libio-socket-ssl-perl. Preparing to unpack .../33-libio-socket-ssl-perl_2.066-1_all.deb ... Unpacking libio-socket-ssl-perl (2.066-1) ... Selecting previously unselected package libnet-smtp-ssl-perl. Preparing to unpack .../34-libnet-smtp-ssl-perl_1.04-1_all.deb ... Unpacking libnet-smtp-ssl-perl (1.04-1) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../35-libtimedate-perl_2.3000-2_all.deb ... Unpacking libtimedate-perl (2.3000-2) ... Selecting previously unselected package libmailtools-perl. Preparing to unpack .../36-libmailtools-perl_2.21-1_all.deb ... Unpacking libmailtools-perl (2.21-1) ... Selecting previously unselected package libnet-ip-perl. Preparing to unpack .../37-libnet-ip-perl_1.26-2_all.deb ... Unpacking libnet-ip-perl (1.26-2) ... Selecting previously unselected package libnet-dns-perl. Preparing to unpack .../38-libnet-dns-perl_1.20-1_all.deb ... Unpacking libnet-dns-perl (1.20-1) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../39-libnet-domain-tld-perl_1.75-1_all.deb ... Unpacking libnet-domain-tld-perl (1.75-1) ... Selecting previously unselected package libemail-valid-perl. Preparing to unpack .../40-libemail-valid-perl_1.202-1_all.deb ... Unpacking libemail-valid-perl (1.202-1) ... Selecting previously unselected package libexporter-tiny-perl. Preparing to unpack .../41-libexporter-tiny-perl_1.002001-1_all.deb ... Unpacking libexporter-tiny-perl (1.002001-1) ... Selecting previously unselected package libipc-system-simple-perl. Preparing to unpack .../42-libipc-system-simple-perl_1.25-4_all.deb ... Unpacking libipc-system-simple-perl (1.25-4) ... Selecting previously unselected package libfile-basedir-perl. Preparing to unpack .../43-libfile-basedir-perl_0.08-1_all.deb ... Unpacking libfile-basedir-perl (0.08-1) ... Selecting previously unselected package libnumber-compare-perl. Preparing to unpack .../44-libnumber-compare-perl_0.03-1_all.deb ... Unpacking libnumber-compare-perl (0.03-1) ... Selecting previously unselected package libtext-glob-perl. Preparing to unpack .../45-libtext-glob-perl_0.10-1_all.deb ... Unpacking libtext-glob-perl (0.10-1) ... Selecting previously unselected package libfile-find-rule-perl. Preparing to unpack .../46-libfile-find-rule-perl_0.34-1_all.deb ... Unpacking libfile-find-rule-perl (0.34-1) ... Selecting previously unselected package libfuture-perl. Preparing to unpack .../47-libfuture-perl_0.42-1_all.deb ... Unpacking libfuture-perl (0.42-1) ... Selecting previously unselected package libimport-into-perl. Preparing to unpack .../48-libimport-into-perl_1.002005-1_all.deb ... Unpacking libimport-into-perl (1.002005-1) ... Selecting previously unselected package libstruct-dumb-perl. Preparing to unpack .../49-libstruct-dumb-perl_0.09-1_all.deb ... Unpacking libstruct-dumb-perl (0.09-1) ... Selecting previously unselected package libio-async-perl. Preparing to unpack .../50-libio-async-perl_0.74-1_all.deb ... Unpacking libio-async-perl (0.74-1) ... Selecting previously unselected package liblinux-epoll-perl. Preparing to unpack .../51-liblinux-epoll-perl_0.016-1+b2_amd64.deb ... Unpacking liblinux-epoll-perl (0.016-1+b2) ... Selecting previously unselected package libio-async-loop-epoll-perl. Preparing to unpack .../52-libio-async-loop-epoll-perl_0.20-1_all.deb ... Unpacking libio-async-loop-epoll-perl (0.20-1) ... Selecting previously unselected package libio-pty-perl. Preparing to unpack .../53-libio-pty-perl_1%3a1.08-1.1+b6_amd64.deb ... Unpacking libio-pty-perl (1:1.08-1.1+b6) ... Selecting previously unselected package libipc-run-perl. Preparing to unpack .../54-libipc-run-perl_20180523.0-2_all.deb ... Unpacking libipc-run-perl (20180523.0-2) ... Selecting previously unselected package liblist-compare-perl. Preparing to unpack .../55-liblist-compare-perl_0.53-1_all.deb ... Unpacking liblist-compare-perl (0.53-1) ... Selecting previously unselected package liblist-moreutils-perl. Preparing to unpack .../56-liblist-moreutils-perl_0.416-1+b5_amd64.deb ... Unpacking liblist-moreutils-perl (0.416-1+b5) ... Selecting previously unselected package libmldbm-perl. Preparing to unpack .../57-libmldbm-perl_2.05-2_all.deb ... Unpacking libmldbm-perl (2.05-2) ... Selecting previously unselected package librole-tiny-perl. Preparing to unpack .../58-librole-tiny-perl_2.001004-1_all.deb ... Unpacking librole-tiny-perl (2.001004-1) ... Selecting previously unselected package libstrictures-perl. Preparing to unpack .../59-libstrictures-perl_2.000006-1_all.deb ... Unpacking libstrictures-perl (2.000006-1) ... Selecting previously unselected package libsub-quote-perl. Preparing to unpack .../60-libsub-quote-perl_2.006006-1_all.deb ... Unpacking libsub-quote-perl (2.006006-1) ... Selecting previously unselected package libmoo-perl. Preparing to unpack .../61-libmoo-perl_2.003006-1_all.deb ... Unpacking libmoo-perl (2.003006-1) ... Selecting previously unselected package libpackage-stash-perl. Preparing to unpack .../62-libpackage-stash-perl_0.38-1_all.deb ... Unpacking libpackage-stash-perl (0.38-1) ... Selecting previously unselected package libsub-identify-perl. Preparing to unpack .../63-libsub-identify-perl_0.14-1+b2_amd64.deb ... Unpacking libsub-identify-perl (0.14-1+b2) ... Selecting previously unselected package libnamespace-clean-perl. Preparing to unpack .../64-libnamespace-clean-perl_0.27-1_all.deb ... Unpacking libnamespace-clean-perl (0.27-1) ... Selecting previously unselected package libpath-tiny-perl. Preparing to unpack .../65-libpath-tiny-perl_0.108-1_all.deb ... Unpacking libpath-tiny-perl (0.108-1) ... Selecting previously unselected package libtext-levenshtein-perl. Preparing to unpack .../66-libtext-levenshtein-perl_0.13-1_all.deb ... Unpacking libtext-levenshtein-perl (0.13-1) ... Selecting previously unselected package libtype-tiny-perl. Preparing to unpack .../67-libtype-tiny-perl_1.004004-1_all.deb ... Unpacking libtype-tiny-perl (1.004004-1) ... Selecting previously unselected package libyaml-0-2:amd64. Preparing to unpack .../68-libyaml-0-2_0.2.2-1_amd64.deb ... Unpacking libyaml-0-2:amd64 (0.2.2-1) ... Selecting previously unselected package libyaml-libyaml-perl. Preparing to unpack .../69-libyaml-libyaml-perl_0.80+repack-2+b1_amd64.deb ... Unpacking libyaml-libyaml-perl (0.80+repack-2+b1) ... Selecting previously unselected package patchutils. Preparing to unpack .../70-patchutils_0.3.4-2+b1_amd64.deb ... Unpacking patchutils (0.3.4-2+b1) ... Selecting previously unselected package t1utils. Preparing to unpack .../71-t1utils_1.41-3_amd64.deb ... Unpacking t1utils (1.41-3) ... Selecting previously unselected package lintian. Preparing to unpack .../72-lintian_2.36.0_all.deb ... Unpacking lintian (2.36.0) ... Selecting previously unselected package sbuild-build-depends-lintian-dummy:armel. Preparing to unpack .../73-sbuild-build-depends-lintian-dummy_0.invalid.0_armel.deb ... Unpacking sbuild-build-depends-lintian-dummy:armel (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.36+b2) ... Setting up libberkeleydb-perl:amd64 (0.62-1+b1) ... Setting up libstruct-dumb-perl (0.09-1) ... Setting up libdynaloader-functions-perl (0.003-1) ... Setting up libtext-glob-perl (0.10-1) ... Setting up libclass-method-modifiers-perl (2.13-1) ... Setting up liblist-compare-perl (0.53-1) ... Setting up libio-pty-perl (1:1.08-1.1+b6) ... Setting up libclone-perl (0.43-1) ... Setting up libyaml-0-2:amd64 (0.2.2-1) ... Setting up libsub-identify-perl (0.14-1+b2) ... Setting up libhtml-tagset-perl (3.20-4) ... Setting up libsqlite3-0:amd64 (3.30.1-1) ... Setting up libfuture-perl (0.42-1) ... Setting up libyaml-libyaml-perl (0.80+repack-2+b1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up perl-openssl-defaults:amd64 (3) ... Setting up libmldbm-perl (2.05-2) ... Setting up libtext-levenshtein-perl (0.13-1) ... Setting up libassuan0:amd64 (2.5.3-7) ... Setting up libnumber-compare-perl (0.03-1) ... Setting up libio-async-perl (0.74-1) ... Setting up patchutils (0.3.4-2+b1) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up libdigest-hmac-perl (1.03+dfsg-2) ... Setting up libipc-system-simple-perl (1.25-4) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up t1utils (1.41-3) ... Setting up liblinux-epoll-perl (0.016-1+b2) ... Setting up diffstat (1.62-1+b1) ... Setting up libvariable-magic-perl (0.62-1+b2) ... Setting up libb-hooks-op-check-perl (0.22-1+b2) ... Setting up libipc-run-perl (20180523.0-2) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libsub-name-perl (0.26-1) ... Setting up libpath-tiny-perl (0.108-1) ... Setting up librole-tiny-perl (2.001004-1) ... Setting up netbase (5.6) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b3) ... Setting up libexporter-tiny-perl (1.002001-1) ... Setting up libclass-accessor-perl (0.51-1) ... Setting up libnet-ip-perl (1.26-2) ... Setting up readline-common (8.0-3) ... Setting up liburi-perl (1.76-1) ... Setting up libnet-ssleay-perl (1.88-2) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b5) ... Setting up libreadline8:amd64 (8.0-3) ... Setting up libtype-tiny-perl (1.004004-1) ... Setting up libnet-dns-perl (1.20-1) ... Setting up libdevel-callchecker-perl (0.008-1+b1) ... Setting up libio-async-loop-epoll-perl (0.20-1) ... Setting up libhtml-parser-perl (3.72-3+b4) ... Setting up gpgconf (2.2.17-3) ... Setting up libio-socket-ssl-perl (2.066-1) ... Setting up gpg (2.2.17-3) ... Setting up libparams-classify-perl (0.015-1+b2) ... Setting up libcgi-pm-perl (4.44-1) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libmailtools-perl (2.21-1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libemail-valid-perl (1.202-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.003006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.36.0) ... Setting up sbuild-build-depends-lintian-dummy:armel (0.invalid.0) ... Processing triggers for man-db (2.9.0-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.29-3) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 336240 Build-Time: 264 Distribution: unstable Foreign Architectures: armel Host Architecture: armel Install-Time: 19 Job: lambda-align_1.0.3-5 Lintian: pass Machine Architecture: amd64 Package: lambda-align Package-Time: 296 Source-Version: 1.0.3-5 Space: 336240 Status: successful Version: 1.0.3-5 -------------------------------------------------------------------------------- Finished at 2019-11-18T12:32:53Z Build needed 00:04:56, 336240k disk space