sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | libfastahack 1.0.0+dfsg-5 (mips64el) Thu, 19 Mar 2020 21:49:30 +0000 | +==============================================================================+ Package: libfastahack Version: 1.0.0+dfsg-5 Source Version: 1.0.0+dfsg-5 Distribution: unstable Machine Architecture: amd64 Host Architecture: mips64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-3cb34b76-f10e-4fe3-8e7c-96ef487cf086' with '<>' I: NOTICE: Log filtering will replace 'build/libfastahack-4gl9Cq/resolver-Z9dCaB' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-03-19-0817.40.pdiff [2466 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-03-19-1414.42.pdiff [11.7 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-03-19-2014.33.pdiff [17.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-03-19-0817.40.pdiff [2504 B] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-03-19-1414.42.pdiff [2172 B] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-03-19-2014.33.pdiff [53.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-03-19-2014.33.pdiff [17.9 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-03-19-2014.33.pdiff [53.3 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main mips64el Packages [7902 kB] Fetched 8195 kB in 1s (5702 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: libselinux1 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 87.0 kB of archives. After this operation, 0 B of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 libselinux1 amd64 3.0-1+b2 [87.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 87.0 kB in 0s (7028 kB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12838 files and directories currently installed.) Preparing to unpack .../libselinux1_3.0-1+b2_amd64.deb ... Unpacking libselinux1:amd64 (3.0-1+b2) over (3.0-1+b1) ... Setting up libselinux1:amd64 (3.0-1+b2) ... Processing triggers for libc-bin (2.30-2) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'libfastahack' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libfastahack.git Please use: git clone https://salsa.debian.org/med-team/libfastahack.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 18.2 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main libfastahack 1.0.0+dfsg-5 (dsc) [2160 B] Get:2 http://debian.oregonstate.edu/debian unstable/main libfastahack 1.0.0+dfsg-5 (tar) [9088 B] Get:3 http://debian.oregonstate.edu/debian unstable/main libfastahack 1.0.0+dfsg-5 (diff) [6948 B] Fetched 18.2 kB in 0s (329 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/libfastahack-4gl9Cq/libfastahack-1.0.0+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/libfastahack-4gl9Cq' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), d-shlibs, libdisorder-dev, help2man, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el Filtered Build-Depends: debhelper-compat (= 12), d-shlibs, libdisorder-dev, help2man, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [425 B] Get:5 copy:/<>/apt_archive ./ Packages [514 B] Fetched 1896 B in 0s (73.8 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdmainutils build-essential cpp-9-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-10-base:mips64el gcc-9-base:mips64el gcc-9-cross-base-mipsen gcc-9-mips64el-linux-gnuabi64 gcc-9-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libbsd0 libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libdebhelper-perl libdebian-dpkgcross-perl libdisorder-dev:mips64el libdisorder0:mips64el libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:mips64el libgcc-9-dev-mips64el-cross libgcc-s1:mips64el libgcc1-mips64el-cross libglib2.0-0 libgomp1:mips64el libgomp1-mips64el-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libstdc++-9-dev libstdc++-9-dev:mips64el libstdc++-9-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libtool libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db po-debconf sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican | wordlist whois vacation gcc-9-locales cpp-doc dh-make binutils-multiarch g++-multilib g++-9-multilib gcc-9-doc g++-9-multilib-mips64el-linux-gnuabi64 gcc-9-multilib-mips64el-linux-gnuabi64 manpages-dev flex bison gdb-mips64el-linux-gnuabi64 gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:mips64el libc-l10n:mips64el locales:mips64el glibc-doc manpages-dev:mips64el libstdc++-9-doc libstdc++-9-doc:mips64el libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:mips64el libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdmainutils build-essential cpp-9-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-10-base:mips64el gcc-9-base:mips64el gcc-9-cross-base-mipsen gcc-9-mips64el-linux-gnuabi64 gcc-9-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libbsd0 libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libdebhelper-perl libdebian-dpkgcross-perl libdisorder-dev:mips64el libdisorder0:mips64el libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:mips64el libgcc-9-dev-mips64el-cross libgcc-s1:mips64el libgcc1-mips64el-cross libglib2.0-0 libgomp1:mips64el libgomp1-mips64el-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libstdc++-9-dev libstdc++-9-dev:mips64el libstdc++-9-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libtool libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:mips64el sensible-utils ucf 0 upgraded, 93 newly installed, 0 to remove and 0 not upgraded. Need to get 75.3 MB of archives. After this operation, 315 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [944 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-4 [919 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.2-2 [33.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.1-1 [1308 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main mips64el gcc-10-base mips64el 10-20200312-2 [196 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main mips64el gcc-9-base mips64el 9.3.0-3 [196 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-4 [262 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-4 [120 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-4 [67.9 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mips64el-linux-gnuabi64 amd64 2.34-2cross5 [2313 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.15-1 [104 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.30-2 [2633 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev amd64 9.3.0-3 [1677 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9 amd64 9.3.0-3 [10.7 MB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:9.2.1-3.1 [1644 B] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-mips64el-linux-gnuabi64-base amd64 9.2.1-24cross1 [195 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-mips64el-linux-gnuabi64 amd64 9.2.1-24cross1 [6464 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mips64el-linux-gnuabi64 amd64 4:9.2.1-4.1 [16.7 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base-mipsen all 9.2.1-24cross1 [191 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mips64el-cross all 2.29-8cross1 [1324 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-mips64el-cross all 1:9.2.1-24cross1 [69.2 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mips64el-cross all 9.2.1-24cross1 [76.6 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mips64el-cross all 9.2.1-24cross1 [7436 B] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-mips64el-cross all 9.2.1-24cross1 [247 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-mips64el-linux-gnuabi64 amd64 9.2.1-24cross1 [6811 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mips64el-linux-gnuabi64 amd64 4:9.2.1-4.1 [1484 B] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mips64el-cross all 9.2.1-24cross1 [398 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mips64el-cross all 5.4.8-1cross1 [1139 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mips64el-cross all 2.29-8cross1 [2456 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-mips64el-cross all 9.2.1-24cross1 [1725 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-mips64el-linux-gnuabi64 amd64 9.2.1-24cross1 [7046 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mips64el-linux-gnuabi64 amd64 4:9.2.1-4.1 [1192 B] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000002-1 [52.0 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-3 [8296 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-4 [709 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mips64el all 12.8 [6704 B] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 d-shlibs all 0.90 [17.5 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 12.9 [183 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.6.3-2 [23.7 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.6.3-2 [14.7 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.64.1-1 [1341 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.9 [994 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 help2man amd64 1.47.13 [181 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-s1 mips64el 10-20200312-2 [69.6 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt1 mips64el 1:4.4.15-1 [95.5 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main mips64el libc6 mips64el 2.30-2 [2553 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main mips64el libatomic1 mips64el 10-20200312-2 [7520 B] Get:85 http://debian.oregonstate.edu/debian unstable/main mips64el linux-libc-dev mips64el 5.4.19-1 [1068 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt-dev mips64el 1:4.4.15-1 [118 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main mips64el libc6-dev mips64el 2.30-2 [2475 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main mips64el libdisorder0 mips64el 0.0.2+git20130809.8062ee1-1 [4288 B] Get:89 http://debian.oregonstate.edu/debian unstable/main mips64el libdisorder-dev mips64el 0.0.2+git20130809.8062ee1-1 [4324 B] Get:90 http://debian.oregonstate.edu/debian unstable/main mips64el libgomp1 mips64el 10-20200312-2 [89.5 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-9-dev mips64el 9.3.0-3 [247 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++6 mips64el 10-20200312-2 [434 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++-9-dev mips64el 9.3.0-3 [1712 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 75.3 MB in 1s (117 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 12838 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-4_amd64.deb ... Unpacking groff-base (1.22.4-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.2-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.2-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.9.1-1_amd64.deb ... Unpacking man-db (2.9.1-1) ... 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Setting up gcc-9-mips64el-linux-gnuabi64-base:amd64 (9.2.1-24cross1) ... Setting up linux-libc-dev:mips64el (5.4.19-1) ... Setting up libc6-mips64el-cross (2.29-8cross1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.38-4) ... Setting up gcc-9-cross-base-mipsen (9.2.1-24cross1) ... Setting up libyaml-perl (1.30-1) ... Setting up binutils-mips64el-linux-gnuabi64 (2.34-2cross5) ... Setting up libicu63:amd64 (63.2-3) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up gcc-10-base:mips64el (10-20200312-2) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up autopoint (0.19.8.1-10) ... Setting up d-shlibs (0.90) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.15-1) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up libc6-dev:amd64 (2.30-2) ... Setting up linux-libc-dev-mips64el-cross (5.4.8-1cross1) ... Setting up cpp-9-mips64el-linux-gnuabi64 (9.2.1-24cross1) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up cpp-mips64el-linux-gnuabi64 (4:9.2.1-4.1) ... Setting up libgomp1-mips64el-cross (9.2.1-24cross1) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.10+dfsg-4) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up gcc-9-base:mips64el (9.3.0-3) ... Setting up libfile-stripnondeterminism-perl (1.6.3-2) ... Setting up libatomic1-mips64el-cross (9.2.1-24cross1) ... Setting up libgcc1-mips64el-cross (1:9.2.1-24cross1) ... Setting up libstdc++-9-dev:amd64 (9.3.0-3) ... Setting up libtool (2.4.6-14) ... Setting up m4 (1.4.18-4) ... Setting up help2man (1.47.13) ... Setting up libc6-dev-mips64el-cross (2.29-8cross1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0038+nmu1) ... Setting up g++-9 (9.3.0-3) ... Setting up autoconf (2.69-11.1) ... Setting up libstdc++6-mips64el-cross (9.2.1-24cross1) ... Setting up dh-strip-nondeterminism (1.6.3-2) ... Setting up g++ (4:9.2.1-3.1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4) ... Setting up libgcc-9-dev-mips64el-cross (9.2.1-24cross1) ... Setting up build-essential (12.8) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10) ... Setting up libstdc++-9-dev-mips64el-cross (9.2.1-24cross1) ... Setting up man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-9-mips64el-linux-gnuabi64 (9.2.1-24cross1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up gcc-mips64el-linux-gnuabi64 (4:9.2.1-4.1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-9-mips64el-linux-gnuabi64 (9.2.1-24cross1) ... Setting up po-debconf (1.0.21) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-mips64el-linux-gnuabi64 (4:9.2.1-4.1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-mips64el (12.8) ... Setting up libcrypt1:mips64el (1:4.4.15-1) ... Setting up libgcc-s1:mips64el (10-20200312-2) ... Setting up dh-autoreconf (19) ... Setting up libc6:mips64el (2.30-2) ... Setting up libcrypt-dev:mips64el (1:4.4.15-1) ... Setting up libc6-dev:mips64el (2.30-2) ... Setting up libstdc++6:mips64el (10-20200312-2) ... Setting up libdisorder0:mips64el (0.0.2+git20130809.8062ee1-1) ... Setting up debhelper (12.9) ... Setting up libgomp1:mips64el (10-20200312-2) ... Setting up libatomic1:mips64el (10-20200312-2) ... Setting up libdisorder-dev:mips64el (0.0.2+git20130809.8062ee1-1) ... Setting up libgcc-9-dev:mips64el (9.3.0-3) ... Setting up libstdc++-9-dev:mips64el (9.3.0-3) ... Setting up sbuild-build-depends-main-dummy:mips64el (0.invalid.0) ... Processing triggers for libc-bin (2.30-2) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mips64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-6-amd64 #1 SMP Debian 4.19.67-2+deb10u2 (2019-11-11) amd64 (x86_64) Toolchain package versions: binutils_2.34-4 dpkg-dev_1.19.7 g++-9_9.3.0-3 gcc-8_8.4.0-1 gcc-9_9.3.0-3 libc6-dev_2.30-2 libstdc++-9-dev_9.3.0-3 libstdc++-9-dev-mips64el-cross_9.2.1-24cross1 libstdc++6_10-20200312-2 libstdc++6-mips64el-cross_9.2.1-24cross1 linux-libc-dev_5.4.19-1 Package versions: adduser_3.118 apt_2.0.0 autoconf_2.69-11.1 automake_1:1.16.1-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-4 binutils-common_2.34-4 binutils-mips64el-linux-gnuabi64_2.34-2cross5 binutils-x86-64-linux-gnu_2.34-4 bsdmainutils_11.1.2+b1 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 coreutils_8.30-3+b1 cpp_4:9.2.1-3.1 cpp-8_8.4.0-1 cpp-9_9.3.0-3 cpp-9-mips64el-linux-gnuabi64_9.2.1-24cross1 cpp-mips64el-linux-gnuabi64_4:9.2.1-4.1 cross-config_2.6.15-3 crossbuild-essential-mips64el_12.8 d-shlibs_0.90 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.9 debian-archive-keyring_2019.1 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.6.3-2 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.5-2 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.38-4 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-9_9.3.0-3 g++-9-mips64el-linux-gnuabi64_9.2.1-24cross1 g++-mips64el-linux-gnuabi64_4:9.2.1-4.1 gcc_4:9.2.1-3.1 gcc-10-base_10-20200312-2 gcc-8_8.4.0-1 gcc-8-base_8.4.0-1 gcc-9_9.3.0-3 gcc-9-base_9.3.0-3 gcc-9-cross-base-mipsen_9.2.1-24cross1 gcc-9-mips64el-linux-gnuabi64_9.2.1-24cross1 gcc-9-mips64el-linux-gnuabi64-base_9.2.1-24cross1 gcc-mips64el-linux-gnuabi64_4:9.2.1-4.1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.19-3 grep_3.4-1 groff-base_1.22.4-4 gzip_1.10-1 help2man_1.47.13 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-6 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.0.0 libarchive-zip-perl_1.68-1 libasan5_9.3.0-3 libatomic1_10-20200312-2 libatomic1-mips64el-cross_9.2.1-24cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2+b1 libbinutils_2.34-4 libblkid1_2.34-0.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.30-2 libc-dev-bin_2.30-2 libc6_2.30-2 libc6-dev_2.30-2 libc6-dev-mips64el-cross_2.29-8cross1 libc6-mips64el-cross_2.29-8cross1 libcap-ng0_0.7.9-2.1+b2 libcc1-0_10-20200312-2 libcom-err2_1.45.5-2 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000002-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.15-1 libcrypt1_1:4.4.15-1 libctf-nobfd0_2.34-4 libctf0_2.34-4 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.251 libdebhelper-perl_12.9 libdebian-dpkgcross-perl_2.6.15-3 libdisorder-dev_0.0.2+git20130809.8062ee1-1 libdisorder0_0.0.2+git20130809.8062ee1-1 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libext2fs2_1.45.5-2 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi6_3.2.1-9 libffi7_3.3-3 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.6.3-2 libfile-which-perl_1.23-1 libgcc-8-dev_8.4.0-1 libgcc-9-dev_9.3.0-3 libgcc-9-dev-mips64el-cross_9.2.1-24cross1 libgcc-s1_10-20200312-2 libgcc1_1:10-20200312-2 libgcc1-mips64el-cross_1:9.2.1-24cross1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.1-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.12-2 libgomp1_10-20200312-2 libgomp1-mips64el-cross_9.2.1-24cross1 libgpg-error0_1.37-1 libhogweed4_3.5.1+really3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libicu63_63.2-3 libidn2-0_2.3.0-1 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 libitm1_10-20200312-2 liblocale-gettext-perl_1.07-4 liblsan0_10-20200312-2 liblz4-1_1.9.2-2 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.4.0-1 libncursesw6_6.2-1 libnettle6_3.5.1+really3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libp11-kit0_0.23.20-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12+b1 libperl5.28_5.28.1-6 libperl5.30_5.30.0-9 libpipeline1_1.5.2-2 libquadmath0_10-20200312-2 libseccomp2_2.4.3-1 libselinux1_3.0-1+b2 libsemanage-common_3.0-1 libsemanage1_3.0-1+b1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libss2_1.45.5-2 libstdc++-9-dev_9.3.0-3 libstdc++-9-dev-mips64el-cross_9.2.1-24cross1 libstdc++6_10-20200312-2 libstdc++6-mips64el-cross_9.2.1-24cross1 libsub-override-perl_0.09-2 libsystemd0_245.2-1 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libtsan0_10-20200312-2 libubsan1_10-20200312-2 libuchardet0_0.0.6-3 libudev1_245.2-1 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libxml-libxml-perl_2.0134+dfsg-2 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-4 libyaml-perl_1.30-1 libzstd1_1.4.4+dfsg-3 linux-libc-dev_5.4.19-1 linux-libc-dev-mips64el-cross_5.4.8-1cross1 login_1:4.8.1-1 logsave_1.45.5-2 lsb-base_11.1.0 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mount_2.34-0.1 ncurses-base_6.2-1 ncurses-bin_6.2-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.0-9 po-debconf_1.0.21 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-2.1 tar_1.30+dfsg-7 tzdata_2019c-3 ucf_3.0038+nmu1 util-linux_2.34-0.1 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libfastahack Binary: libfastahack0, libfastahack-dev, fastahack Architecture: any Version: 1.0.0+dfsg-5 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/ekg/fastahack Standards-Version: 4.4.1 Vcs-Browser: https://salsa.debian.org/med-team/libfastahack Vcs-Git: https://salsa.debian.org/med-team/libfastahack.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 12), d-shlibs, libdisorder-dev, help2man Package-List: fastahack deb science optional arch=any libfastahack-dev deb libdevel optional arch=any libfastahack0 deb libs optional arch=any Checksums-Sha1: 3e89fea6a55b5a312a980d1d493a77f64dfb5d9a 9088 libfastahack_1.0.0+dfsg.orig.tar.xz d3d9d6b4e0fba9afae12edbd5bba5325f8286e24 6948 libfastahack_1.0.0+dfsg-5.debian.tar.xz Checksums-Sha256: 41e512b34158564ae83355a1e11a5ae366f3ca9ac4a31ef80f3f26f3438a91af 9088 libfastahack_1.0.0+dfsg.orig.tar.xz 083c9c54d706e93371226803a47adf7a61897923de3c335c5ac07079ef0e485b 6948 libfastahack_1.0.0+dfsg-5.debian.tar.xz Files: ef74d8e313b8f84e6454baa07b9a0026 9088 libfastahack_1.0.0+dfsg.orig.tar.xz 6ead16f5f919bf7f39d0506fc3d5ff99 6948 libfastahack_1.0.0+dfsg-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAl4YxSIACgkQPCZ2P2xn 5uJmEg/+NuFEa9A3RZd9zAPhOa2i8zLtw155CmiFsY8IQRVBiOwAWWcOfkVySrwW 5UqWB1xF+C6Oe6boNiOEoAKCLSBApejdE2Gk4mjmId1aFrh9hQJQPodH+UG11gjg jfsa2dc/n9PAw29GwTfGYZAKpWHDJJROBtAbc0YrDPcPHxxrGKuGPZ++kKIRKEOj HViUDB7jOvXsykb4a/Nf67CxlVMy148JjDHct/iMbZ5+xvP4VndnNB1gGbLqSgLS x2zKrxrlLGU5H0/LRfjq7gfjhkgrB99JcjL9aQfupOE5FUDD982cu46xNtGCOU0c qQ+NSyX3+EORvO8zHYkZRzGLcRsUYZE0pU3EyYvjsoKtDU65DJTJBgKaHV1Xxv/J cGdh5uhxmowuIb4MthTpXhzrPJWNI4+f7Bchad/OhrqTSaOGAsUHNvTEeoQg2B/H 5hS+j+dtR6rhhyHv4dH7y7C4Sz624Jri5bKKaZ1NZwIleb9mPhW5MThSgkQ4t5Ox 0Ij0nRPctWiwc7Y6SIttdcNaf1uNdUxjHi7R5iRWRLpjdHeI7ouUQU6f6SXpSBOa ogH3rWBNBhqEkj+HJfgBy9/6sYnWjxeo/hcyeL3P+ZFqkv8kfS6CJSJp6GaTPk94 H+J5844EBNva/vxTpUSZ4Txu5n68a2Zpu/l9m4S9o3F+NEvKecY= =78j8 -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Fri Jan 10 18:40:34 2020 UTC gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libfastahack_1.0.0+dfsg-5.dsc dpkg-source: info: extracting libfastahack in /<> dpkg-source: info: unpacking libfastahack_1.0.0+dfsg.orig.tar.xz dpkg-source: info: unpacking libfastahack_1.0.0+dfsg-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying autoconf.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mips64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-3cb34b76-f10e-4fe3-8e7c-96ef487cf086 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -amips64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package libfastahack dpkg-buildpackage: info: source version 1.0.0+dfsg-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-architecture: warning: specified GNU system type mips64el-linux-gnuabi64 does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mips64el fakeroot debian/rules clean dh clean dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a aclocal: warning: couldn't open directory 'config': No such file or directory libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'config'. libtoolize: copying file 'config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'config'. libtoolize: copying file 'config/libtool.m4' libtoolize: copying file 'config/ltoptions.m4' libtoolize: copying file 'config/ltsugar.m4' libtoolize: copying file 'config/ltversion.m4' libtoolize: copying file 'config/lt~obsolete.m4' libtoolize: Consider adding '-I config' to ACLOCAL_AMFLAGS in Makefile.am. configure.ac:30: installing 'config/compile' configure.ac:30: installing 'config/config.guess' configure.ac:30: installing 'config/config.sub' configure.ac:18: installing 'config/install-sh' configure.ac:18: installing 'config/missing' Makefile.am: installing 'config/depcomp' dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/mips64el-linux-gnuabi64 --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=mips64el-linux-gnuabi64 configure: WARNING: unrecognized options: --disable-maintainer-mode configure: loading site script /etc/dpkg-cross/cross-config.mips64el checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for mips64el-linux-gnuabi64-strip... mips64el-linux-gnuabi64-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether UID '1003' is supported by ustar format... yes checking whether GID '1003' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking whether ln -s works... yes checking build system type... x86_64-pc-linux-gnu checking host system type... mips64el-unknown-linux-gnuabi64 checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for mips64el-linux-gnuabi64-gcc... mips64el-linux-gnuabi64-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether mips64el-linux-gnuabi64-gcc accepts -g... yes checking for mips64el-linux-gnuabi64-gcc option to accept ISO C89... none needed checking whether mips64el-linux-gnuabi64-gcc understands -c and -o together... yes checking dependency style of mips64el-linux-gnuabi64-gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by mips64el-linux-gnuabi64-gcc... /usr/mips64el-linux-gnuabi64/bin/ld checking if the linker (/usr/mips64el-linux-gnuabi64/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/mips64el-linux-gnuabi64-nm -B checking the name lister (/usr/bin/mips64el-linux-gnuabi64-nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to mips64el-unknown-linux-gnuabi64 format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/mips64el-linux-gnuabi64/bin/ld option to reload object files... -r checking for mips64el-linux-gnuabi64-objdump... mips64el-linux-gnuabi64-objdump checking how to recognize dependent libraries... pass_all checking for mips64el-linux-gnuabi64-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for mips64el-linux-gnuabi64-ar... mips64el-linux-gnuabi64-ar checking for archiver @FILE support... @ checking for mips64el-linux-gnuabi64-strip... (cached) mips64el-linux-gnuabi64-strip checking for mips64el-linux-gnuabi64-ranlib... mips64el-linux-gnuabi64-ranlib checking command to parse /usr/bin/mips64el-linux-gnuabi64-nm -B output from mips64el-linux-gnuabi64-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mips64el-linux-gnuabi64-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... mips64el-linux-gnuabi64-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mips64el-linux-gnuabi64-gcc supports -fno-rtti -fno-exceptions... no checking for mips64el-linux-gnuabi64-gcc option to produce PIC... -fPIC -DPIC checking if mips64el-linux-gnuabi64-gcc PIC flag -fPIC -DPIC works... yes checking if mips64el-linux-gnuabi64-gcc static flag -static works... yes checking if mips64el-linux-gnuabi64-gcc supports -c -o file.o... yes checking if mips64el-linux-gnuabi64-gcc supports -c -o file.o... (cached) yes checking whether the mips64el-linux-gnuabi64-gcc linker (/usr/mips64el-linux-gnuabi64/bin/ld -m elf64ltsmip) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for mips64el-linux-gnuabi64-g++... mips64el-linux-gnuabi64-g++ checking whether we are using the GNU C++ compiler... yes checking whether mips64el-linux-gnuabi64-g++ accepts -g... yes checking dependency style of mips64el-linux-gnuabi64-g++... none checking how to run the C++ preprocessor... mips64el-linux-gnuabi64-g++ -E checking for ld used by mips64el-linux-gnuabi64-g++... /usr/mips64el-linux-gnuabi64/bin/ld -m elf64ltsmip checking if the linker (/usr/mips64el-linux-gnuabi64/bin/ld -m elf64ltsmip) is GNU ld... yes checking whether the mips64el-linux-gnuabi64-g++ linker (/usr/mips64el-linux-gnuabi64/bin/ld -m elf64ltsmip) supports shared libraries... yes checking for mips64el-linux-gnuabi64-g++ option to produce PIC... -fPIC -DPIC checking if mips64el-linux-gnuabi64-g++ PIC flag -fPIC -DPIC works... yes checking if mips64el-linux-gnuabi64-g++ static flag -static works... yes checking if mips64el-linux-gnuabi64-g++ supports -c -o file.o... yes checking if mips64el-linux-gnuabi64-g++ supports -c -o file.o... (cached) yes checking whether the mips64el-linux-gnuabi64-g++ linker (/usr/mips64el-linux-gnuabi64/bin/ld -m elf64ltsmip) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate ./configure: line 11542: AX_CXXFLAGS: command not found checking for ANSI C header files... (cached) yes checking for stdlib.h... (cached) yes checking whether make sets $(MAKE)... (cached) yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating libfastahack.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-am make[2]: Entering directory '/<>' mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o FastaHack.o FastaHack.cpp /bin/bash ./libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libfastahack_la-Fasta.lo `test -f 'Fasta.cpp' || echo './'`Fasta.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c Fasta.cpp -fPIC -DPIC -o .libs/libfastahack_la-Fasta.o libtool: compile: mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c Fasta.cpp -o libfastahack_la-Fasta.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libfastahack_la-split.lo `test -f 'split.cpp' || echo './'`split.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c split.cpp -fPIC -DPIC -o .libs/libfastahack_la-split.o libtool: compile: mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c split.cpp -o libfastahack_la-split.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=link mips64el-linux-gnuabi64-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 0:0 -Wl,-z,relro -Wl,-z,now -o libfastahack.la -rpath /usr/lib/mips64el-linux-gnuabi64 libfastahack_la-Fasta.lo libfastahack_la-split.lo libtool: link: mips64el-linux-gnuabi64-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/lib/../lib/crti.o /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/crtbeginS.o .libs/libfastahack_la-Fasta.o .libs/libfastahack_la-split.o -L/usr/lib/gcc-cross/mips64el-linux-gnuabi64/9 -L/usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/lib/../lib -L/lib/mips64el-linux-gnuabi64 -L/lib/../lib -L/usr/lib/mips64el-linux-gnuabi64 -L/usr/lib/../lib -L/usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/lib -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/crtendS.o /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/lib/../lib/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libfastahack.so.0 -o .libs/libfastahack.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libfastahack.so.0" && ln -s "libfastahack.so.0.0.0" "libfastahack.so.0") libtool: link: (cd ".libs" && rm -f "libfastahack.so" && ln -s "libfastahack.so.0.0.0" "libfastahack.so") libtool: link: mips64el-linux-gnuabi64-ar cr .libs/libfastahack.a libfastahack_la-Fasta.o libfastahack_la-split.o libtool: link: mips64el-linux-gnuabi64-ranlib .libs/libfastahack.a libtool: link: ( cd ".libs" && rm -f "libfastahack.la" && ln -s "../libfastahack.la" "libfastahack.la" ) /bin/bash ./libtool --tag=CXX --mode=link mips64el-linux-gnuabi64-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o fastahack FastaHack.o libfastahack.la -ldisorder libtool: link: mips64el-linux-gnuabi64-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/fastahack FastaHack.o ./.libs/libfastahack.so -ldisorder make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/libfastahack-1.0.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' make[2]: Entering directory '/<>' /bin/mkdir -p '/<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64' /bin/bash ./libtool --mode=install /usr/bin/install -c libfastahack.la '/<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/libfastahack.so.0.0.0 /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libfastahack.so.0.0.0 libtool: install: (cd /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64 && { ln -s -f libfastahack.so.0.0.0 libfastahack.so.0 || { rm -f libfastahack.so.0 && ln -s libfastahack.so.0.0.0 libfastahack.so.0; }; }) libtool: install: (cd /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64 && { ln -s -f libfastahack.so.0.0.0 libfastahack.so || { rm -f libfastahack.so && ln -s libfastahack.so.0.0.0 libfastahack.so; }; }) libtool: install: /usr/bin/install -c .libs/libfastahack.lai /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libfastahack.la libtool: install: /usr/bin/install -c .libs/libfastahack.a /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libfastahack.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libfastahack.a libtool: install: mips64el-linux-gnuabi64-ranlib /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libfastahack.a libtool: warning: remember to run 'libtool --finish /usr/lib/mips64el-linux-gnuabi64' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/bash ./libtool --mode=install /usr/bin/install -c fastahack '/<>/debian/tmp/usr/bin' libtool: warning: 'libfastahack.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/fastahack /<>/debian/tmp/usr/bin/fastahack /bin/mkdir -p '/<>/debian/tmp/usr/include/fastahack' /usr/bin/install -c -m 644 Fasta.h LargeFileSupport.h Region.h split.h '/<>/debian/tmp/usr/include/fastahack' /bin/mkdir -p '/<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/pkgconfig' /usr/bin/install -c -m 644 libfastahack.pc '/<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/pkgconfig' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/tmp/usr/include/* usr/include \ --movedev "debian/tmp/usr/lib/*/pkgconfig/*.pc" usr/lib/mips64el-linux-gnuabi64/pkgconfig \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility set -e install -d -m 755 debian/libfastahack-dev/usr/lib/mips64el-linux-gnuabi64 install -d -m 755 debian/libfastahack0/usr/lib/mips64el-linux-gnuabi64 mv debian/tmp/usr/lib/mips64el-linux-gnuabi64/libfastahack.a debian/libfastahack-dev/usr/lib/mips64el-linux-gnuabi64 mv debian/tmp/usr/lib/mips64el-linux-gnuabi64/libfastahack.so debian/libfastahack-dev/usr/lib/mips64el-linux-gnuabi64 mv /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libfastahack.so.0 debian/libfastahack0/usr/lib/mips64el-linux-gnuabi64 mv /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libfastahack.so.0.0.0 debian/libfastahack0/usr/lib/mips64el-linux-gnuabi64 PKGDEV=libfastahack-dev PKGSHL=libfastahack0 install -d -m 755 debian/libfastahack-dev/usr/include mv debian/tmp/usr/include/fastahack debian/libfastahack-dev/usr/include install -d -m 755 debian/libfastahack-dev/usr/lib/mips64el-linux-gnuabi64/pkgconfig mv debian/tmp/usr/lib/*/pkgconfig/*.pc debian/libfastahack-dev/usr/lib/mips64el-linux-gnuabi64/pkgconfig make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a debian/rules override_dh_installman make[1]: Entering directory '/<>' help2man --no-discard-stderr --no-info --version-string=1.0.0+dfsg-5 \ --name="fastahack - indexing and extracting sequences and subsequences from FASTA files" \ ./fastahack > debian/fastahack.1 dh_installman make[1]: Leaving directory '/<>' dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_missing: warning: usr/lib/mips64el-linux-gnuabi64/libfastahack.la exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: fastahack (1), libfastahack-dev (0), libfastahack0 (0) * dh_installdocs: fastahack (1), libfastahack-dev (0), libfastahack0 (0) * dh_installman: fastahack (1), libfastahack-dev (0), libfastahack0 (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built For a short-term work-around: Add the files to debian/not-installed dh_dwz -a dh_strip -a debian/rules override_dh_makeshlibs make[1]: Entering directory '/<>' echo "On architecture mips64el symbols file is provided" On architecture mips64el symbols file is provided dh_makeshlibs dpkg-gensymbols: warning: debian/libfastahack0/DEBIAN/symbols doesn't match completely debian/libfastahack0.symbols --- debian/libfastahack0.symbols (libfastahack0_1.0.0+dfsg-5_mips64el) +++ dpkg-gensymbolstTg7r5 2020-03-19 21:50:26.071831296 +0000 @@ -36,14 +36,14 @@ _ZNSt4pairINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE15FastaIndexEntryED2Ev@Base 0.0+git20160702.bbc645f _ZNSt6vectorI15FastaIndexEntrySaIS0_EE17_M_realloc_insertIJRKS0_EEEvN9__gnu_cxx17__normal_iteratorIPS0_S2_EEDpOT_@Base 0.0+git20160702.bbc645f _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_@Base 0.0+git20160702.bbc645f - (optional)_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_@Base 0.0+git20160702.bbc645f +#MISSING: 1.0.0+dfsg-5# (optional)_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_@Base 0.0+git20160702.bbc645f _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED1Ev@Base 0.0+git20160702.bbc645f _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED2Ev@Base 0.0+git20160702.bbc645f (optional)_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPKcEEvT_S8_St20forward_iterator_tag@Base 0.0+git20160702.bbc645f (optional)_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag@Base 0.0+git20160702.bbc645f - (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_15FastaIndexEntryESt10_Select1stIS9_ESt4lessIS5_ESaIS9_EE10_M_insert_IS6_IS5_S8_ENSF_11_Alloc_nodeEEESt17_Rb_tree_iteratorIS9_EPSt18_Rb_tree_node_baseSM_OT_RT0_@Base 0.0+git20160702.bbc645f +#MISSING: 1.0.0+dfsg-5# (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_15FastaIndexEntryESt10_Select1stIS9_ESt4lessIS5_ESaIS9_EE10_M_insert_IS6_IS5_S8_ENSF_11_Alloc_nodeEEESt17_Rb_tree_iteratorIS9_EPSt18_Rb_tree_node_baseSM_OT_RT0_@Base 0.0+git20160702.bbc645f (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_15FastaIndexEntryESt10_Select1stIS9_ESt4lessIS5_ESaIS9_EE14_M_insert_nodeEPSt18_Rb_tree_node_baseSH_PSt13_Rb_tree_nodeIS9_E@Base 0.0+git20160702.bbc645f - (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_15FastaIndexEntryESt10_Select1stIS9_ESt4lessIS5_ESaIS9_EE16_M_insert_uniqueIS6_IS5_S8_EEES6_ISt17_Rb_tree_iteratorIS9_EbEOT_@Base 0.0+git20160702.bbc645f +#MISSING: 1.0.0+dfsg-5# (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_15FastaIndexEntryESt10_Select1stIS9_ESt4lessIS5_ESaIS9_EE16_M_insert_uniqueIS6_IS5_S8_EEES6_ISt17_Rb_tree_iteratorIS9_EbEOT_@Base 0.0+git20160702.bbc645f _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_15FastaIndexEntryESt10_Select1stIS9_ESt4lessIS5_ESaIS9_EE17_M_emplace_uniqueIJS6_IS5_S8_EEEES6_ISt17_Rb_tree_iteratorIS9_EbEDpOT_@Base 0.0+git20160702.bbc645f _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_15FastaIndexEntryESt10_Select1stIS9_ESt4lessIS5_ESaIS9_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS7_EESK_IJEEEEESt17_Rb_tree_iteratorIS9_ESt23_Rb_tree_const_iteratorIS9_EDpOT_@Base 0.0+git20160702.bbc645f _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_15FastaIndexEntryESt10_Select1stIS9_ESt4lessIS5_ESaIS9_EE24_M_get_insert_unique_posERS7_@Base 0.0+git20160702.bbc645f echo "dh_makeshlibs for architecture mips64el including symbols done" dh_makeshlibs for architecture mips64el including symbols done make[1]: Leaving directory '/<>' dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'libfastahack0' in '../libfastahack0_1.0.0+dfsg-5_mips64el.deb'. dpkg-deb: building package 'libfastahack0-dbgsym' in '../libfastahack0-dbgsym_1.0.0+dfsg-5_mips64el.deb'. dpkg-deb: building package 'libfastahack-dev' in '../libfastahack-dev_1.0.0+dfsg-5_mips64el.deb'. dpkg-deb: building package 'fastahack' in '../fastahack_1.0.0+dfsg-5_mips64el.deb'. dpkg-deb: building package 'fastahack-dbgsym' in '../fastahack-dbgsym_1.0.0+dfsg-5_mips64el.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../libfastahack_1.0.0+dfsg-5_mips64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-03-19T21:50:30Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libfastahack_1.0.0+dfsg-5_mips64el.changes: ------------------------------------------- Format: 1.8 Date: Fri, 10 Jan 2020 19:40:17 +0100 Source: libfastahack Binary: fastahack fastahack-dbgsym libfastahack-dev libfastahack0 libfastahack0-dbgsym Built-For-Profiles: cross nocheck Architecture: mips64el Version: 1.0.0+dfsg-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: fastahack - utility for indexing and sequence extraction from FASTA files libfastahack-dev - library for indexing and sequence extraction from FASTA files (de libfastahack0 - library for indexing and sequence extraction from FASTA files (li Changes: libfastahack (1.0.0+dfsg-5) unstable; urgency=medium . * Team upload. * Breaks+Replaces: libfastahack0 (<< 1.0.0+dfsg-4) Checksums-Sha1: 39bbe8fa46edc1cf46d914489a843bc9997e6c02 85000 fastahack-dbgsym_1.0.0+dfsg-5_mips64el.deb 9b911ae51707fecffdc1ee561a85f9dd3a96e538 11812 fastahack_1.0.0+dfsg-5_mips64el.deb 5bb5f8a117ba4ca36999c2e56bcdbe641e5ca3d4 28412 libfastahack-dev_1.0.0+dfsg-5_mips64el.deb d4b0a75a97343199dd6b0c22a3fec48a26e9623c 237072 libfastahack0-dbgsym_1.0.0+dfsg-5_mips64el.deb e4173112e7b9c4821c3d1e062a3afac4ce5163d4 23324 libfastahack0_1.0.0+dfsg-5_mips64el.deb 33c2dd585aa67d7ac86c1dda91ef43b7dbca65ce 6363 libfastahack_1.0.0+dfsg-5_mips64el.buildinfo Checksums-Sha256: 7302245e2ded87bc0f4165fc9821ccfefe2ad8dfbd6c885bf807c50d5fc4d5c5 85000 fastahack-dbgsym_1.0.0+dfsg-5_mips64el.deb f96442046b0f44a92e09413734a418d842c098d2d2ba8ef9b75488314842be40 11812 fastahack_1.0.0+dfsg-5_mips64el.deb 5a38fb734bccc797b1b6a48293ca41ac24e81061a2ddce449526723d1a5a624e 28412 libfastahack-dev_1.0.0+dfsg-5_mips64el.deb 4185bfe82f7411048aeb9c5f632ee492d9d7e0ab3e24041849a4cecb59bfb2a0 237072 libfastahack0-dbgsym_1.0.0+dfsg-5_mips64el.deb 5f4024a9ced5c93eb1804246c2b7cac0a6be8ad726a943f862114d7d938ce659 23324 libfastahack0_1.0.0+dfsg-5_mips64el.deb c3a448ea245e8a49815790efaf50b5dc2922344e5d3da5bcccd53785a5440b7a 6363 libfastahack_1.0.0+dfsg-5_mips64el.buildinfo Files: 55237c306f0bb9fa416f25d98aa6e2f5 85000 debug optional fastahack-dbgsym_1.0.0+dfsg-5_mips64el.deb d1c4c9880b9704a8edae198ff450cced 11812 science optional fastahack_1.0.0+dfsg-5_mips64el.deb e09ccf632aae5710c8afaae1f326ff79 28412 libdevel optional libfastahack-dev_1.0.0+dfsg-5_mips64el.deb bd84efa712b14e3d23aa8e2a26b55798 237072 debug optional libfastahack0-dbgsym_1.0.0+dfsg-5_mips64el.deb 6990577743e5e069f07e886f50b39d78 23324 libs optional libfastahack0_1.0.0+dfsg-5_mips64el.deb ab209a888098a8d7e1a9e86c5698d853 6363 science optional libfastahack_1.0.0+dfsg-5_mips64el.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: libfastahack Binary: libfastahack0 libfastahack-dev fastahack Architecture: mips64el Version: 1.0.0+dfsg-5 Checksums-Md5: 55237c306f0bb9fa416f25d98aa6e2f5 85000 fastahack-dbgsym_1.0.0+dfsg-5_mips64el.deb d1c4c9880b9704a8edae198ff450cced 11812 fastahack_1.0.0+dfsg-5_mips64el.deb e09ccf632aae5710c8afaae1f326ff79 28412 libfastahack-dev_1.0.0+dfsg-5_mips64el.deb bd84efa712b14e3d23aa8e2a26b55798 237072 libfastahack0-dbgsym_1.0.0+dfsg-5_mips64el.deb 6990577743e5e069f07e886f50b39d78 23324 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5f4024a9ced5c93eb1804246c2b7cac0a6be8ad726a943f862114d7d938ce659 23324 libfastahack0_1.0.0+dfsg-5_mips64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Thu, 19 Mar 2020 21:50:29 +0000 Build-Path: /<> Installed-Build-Depends: adduser (= 3.118), apt (= 2.0.0), autoconf (= 2.69-11.1), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-6), binutils (= 2.34-4), binutils-common (= 2.34-4), binutils-x86-64-linux-gnu (= 2.34-4), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.34-0.1), build-essential (= 12.8), bzip2 (= 1.0.8-2), coreutils (= 8.30-3+b1), cpp (= 4:9.2.1-3.1), cpp-8 (= 8.4.0-1), cpp-9 (= 9.3.0-3), d-shlibs (= 0.90), dash (= 0.5.10.2-6), debconf (= 1.5.73), debhelper (= 12.9), debian-archive-keyring (= 2019.1), debianutils (= 4.9.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.6.3-2), diffutils (= 1:3.7-3), dpkg (= 1.19.7), dpkg-dev (= 1.19.7), dwz (= 0.13-5), fdisk (= 2.34-0.1), file (= 1:5.38-4), findutils (= 4.7.0-1), g++ (= 4:9.2.1-3.1), g++-9 (= 9.3.0-3), gcc (= 4:9.2.1-3.1), gcc-10-base (= 10-20200312-2), gcc-8 (= 8.4.0-1), gcc-8-base (= 8.4.0-1), gcc-9 (= 9.3.0-3), gcc-9-base (= 9.3.0-3), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), gpgv (= 2.2.19-3), grep (= 3.4-1), groff-base (= 1.22.4-4), gzip (= 1.10-1), help2man (= 1.47.13), hostname (= 3.23), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-6), libapt-pkg6.0 (= 2.0.0), libarchive-zip-perl (= 1.68-1), libasan5 (= 9.3.0-3), libatomic1 (= 10-20200312-2), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-2), libaudit1 (= 1:2.8.5-2+b1), libbinutils (= 2.34-4), libblkid1 (= 2.34-0.1), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.8-2), libc-bin (= 2.30-2), libc-dev-bin (= 2.30-2), libc6 (= 2.30-2), libc6-dev (= 2.30-2), libcap-ng0 (= 0.7.9-2.1+b2), libcc1-0 (= 10-20200312-2), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.15-1), libcrypt1 (= 1:4.4.15-1), libctf-nobfd0 (= 2.34-4), libctf0 (= 2.34-4), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.251), libdebhelper-perl (= 12.9), libdisorder-dev (= 0.0.2+git20130809.8062ee1-1), libdisorder0 (= 0.0.2+git20130809.8062ee1-1), libdpkg-perl (= 1.19.7), libelf1 (= 0.176-1.1), libfdisk1 (= 2.34-0.1), libffi7 (= 3.3-3), libfile-stripnondeterminism-perl (= 1.6.3-2), libgcc-8-dev (= 8.4.0-1), libgcc-9-dev (= 9.3.0-3), libgcc-s1 (= 10-20200312-2), libgcc1 (= 1:10-20200312-2), libgcrypt20 (= 1.8.5-5), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libglib2.0-0 (= 2.64.1-1), libgmp10 (= 2:6.2.0+dfsg-4), libgnutls30 (= 3.6.12-2), libgomp1 (= 10-20200312-2), libgpg-error0 (= 1.37-1), libhogweed5 (= 3.5.1+really3.5.1-2), libicu63 (= 63.2-3), libidn2-0 (= 2.3.0-1), libisl22 (= 0.22.1-1), libitm1 (= 10-20200312-2), liblocale-gettext-perl (= 1.07-4), liblsan0 (= 10-20200312-2), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-4), libmagic1 (= 1:5.38-4), libmount1 (= 2.34-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.4.0-1), libncursesw6 (= 6.2-1), libnettle7 (= 3.5.1+really3.5.1-2), libp11-kit0 (= 0.23.20-1), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-12+b1), libperl5.30 (= 5.30.0-9), libpipeline1 (= 1.5.2-2), libquadmath0 (= 10-20200312-2), libseccomp2 (= 2.4.3-1), libselinux1 (= 3.0-1+b2), libsemanage-common (= 3.0-1), libsemanage1 (= 3.0-1+b1), libsepol1 (= 3.0-1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.34-0.1), libstdc++-9-dev (= 9.3.0-3), libstdc++6 (= 10-20200312-2), libsub-override-perl (= 0.09-2), libsystemd0 (= 245.2-1), libtasn1-6 (= 4.16.0-2), libtinfo6 (= 6.2-1), libtool (= 2.4.6-14), libtsan0 (= 10-20200312-2), libubsan1 (= 10-20200312-2), libuchardet0 (= 0.0.6-3), libudev1 (= 245.2-1), libunistring2 (= 0.9.10-2), libuuid1 (= 2.34-0.1), libxml2 (= 2.9.10+dfsg-4), libzstd1 (= 1.4.4+dfsg-3), linux-libc-dev (= 5.4.19-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.2.1-1.2), man-db (= 2.9.1-1), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2-1), ncurses-bin (= 6.2-1), passwd (= 1:4.8.1-1), patch (= 2.7.6-6), perl (= 5.30.0-9), perl-base (= 5.30.0-9), perl-modules-5.30 (= 5.30.0-9), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-2.1), tar (= 1.30+dfsg-7), util-linux (= 2.34-0.1), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1578681617" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ fastahack-dbgsym_1.0.0+dfsg-5_mips64el.deb ------------------------------------------ new Debian package, version 2.0. size 85000 bytes: control archive=544 bytes. 394 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: fastahack-dbgsym Source: libfastahack Version: 1.0.0+dfsg-5 Auto-Built-Package: debug-symbols Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 101 Depends: fastahack (= 1.0.0+dfsg-5) Section: debug Priority: optional Description: debug symbols for fastahack Build-Ids: c28b52f3513f1656637faeaaafb480ad2359771f drwxr-xr-x root/root 0 2020-01-10 18:40 ./ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/lib/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/lib/debug/.build-id/c2/ -rw-r--r-- root/root 92648 2020-01-10 18:40 ./usr/lib/debug/.build-id/c2/8b52f3513f1656637faeaaafb480ad2359771f.debug drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/share/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-01-10 18:40 ./usr/share/doc/fastahack-dbgsym -> fastahack fastahack_1.0.0+dfsg-5_mips64el.deb ----------------------------------- new Debian package, version 2.0. size 11812 bytes: control archive=1120 bytes. 1370 bytes, 29 lines control 331 bytes, 5 lines md5sums Package: fastahack Source: libfastahack Version: 1.0.0+dfsg-5 Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 41 Depends: libc6 (>= 2.4), libdisorder0 (>= 0.0.2), libfastahack0 (>= 0.0+git20160702.bbc645f), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2) Breaks: libfastahack0 (<< 1.0.0+dfsg-4) Replaces: libfastahack0 (<< 1.0.0+dfsg-4) Section: science Priority: optional Homepage: https://github.com/ekg/fastahack Description: utility for indexing and sequence extraction from FASTA files fastahack is a small application for indexing and extracting sequences and subsequences from FASTA files. The included Fasta.cpp library provides a FASTA reader and indexer that can be embedded into applications which would benefit from directly reading subsequences from FASTA files. The library automatically handles index file generation and use. . Features: * FASTA index (.fai) generation for FASTA files * Sequence extraction * Subsequence extraction * Sequence statistics (currently only entropy is provided) . Sequence and subsequence extraction use fseek64 to provide fastest-possible extraction without RAM-intensive file loading operations. This makes fastahack a useful tool for bioinformaticists who need to quickly extract many subsequences from a reference FASTA sequence. drwxr-xr-x root/root 0 2020-01-10 18:40 ./ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/bin/ -rwxr-xr-x root/root 24152 2020-01-10 18:40 ./usr/bin/fastahack drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/share/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/share/doc/fastahack/ -rw-r--r-- root/root 2958 2019-09-04 06:16 ./usr/share/doc/fastahack/README -rw-r--r-- root/root 1179 2020-01-10 18:40 ./usr/share/doc/fastahack/changelog.Debian.gz -rw-r--r-- root/root 1448 2020-01-08 09:05 ./usr/share/doc/fastahack/copyright drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/share/man/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/share/man/man1/ -rw-r--r-- root/root 310 2020-01-10 18:40 ./usr/share/man/man1/fastahack.1.gz libfastahack-dev_1.0.0+dfsg-5_mips64el.deb ------------------------------------------ new Debian package, version 2.0. size 28412 bytes: control archive=1204 bytes. 1311 bytes, 30 lines control 601 bytes, 8 lines md5sums Package: libfastahack-dev Source: libfastahack Version: 1.0.0+dfsg-5 Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 140 Depends: libfastahack0 (= 1.0.0+dfsg-5) Section: libdevel Priority: optional Homepage: https://github.com/ekg/fastahack Description: library for indexing and sequence extraction from FASTA files (devel) fastahack is a small application for indexing and extracting sequences and subsequences from FASTA files. The included Fasta.cpp library provides a FASTA reader and indexer that can be embedded into applications which would benefit from directly reading subsequences from FASTA files. The library automatically handles index file generation and use. . Features: * FASTA index (.fai) generation for FASTA files * Sequence extraction * Subsequence extraction * Sequence statistics (currently only entropy is provided) . Sequence and subsequence extraction use fseek64 to provide fastest-possible extraction without RAM-intensive file loading operations. This makes fastahack a useful tool for bioinformaticists who need to quickly extract many subsequences from a reference FASTA sequence. . This is the development package containing the statically linked library and the header files. drwxr-xr-x root/root 0 2020-01-10 18:40 ./ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/include/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/include/fastahack/ -rw-r--r-- root/root 2823 2020-01-10 18:40 ./usr/include/fastahack/Fasta.h -rw-r--r-- root/root 412 2020-01-10 18:40 ./usr/include/fastahack/LargeFileSupport.h -rw-r--r-- root/root 1609 2020-01-10 18:40 ./usr/include/fastahack/Region.h -rw-r--r-- root/root 781 2020-01-10 18:40 ./usr/include/fastahack/split.h drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/lib/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/lib/mips64el-linux-gnuabi64/ -rw-r--r-- root/root 118692 2020-01-10 18:40 ./usr/lib/mips64el-linux-gnuabi64/libfastahack.a lrwxrwxrwx root/root 0 2020-01-10 18:40 ./usr/lib/mips64el-linux-gnuabi64/libfastahack.so -> libfastahack.so.0.0.0 drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/lib/mips64el-linux-gnuabi64/pkgconfig/ -rw-r--r-- root/root 264 2020-01-10 18:40 ./usr/lib/mips64el-linux-gnuabi64/pkgconfig/libfastahack.pc drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/share/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/share/doc/libfastahack-dev/ -rw-r--r-- root/root 1179 2020-01-10 18:40 ./usr/share/doc/libfastahack-dev/changelog.Debian.gz -rw-r--r-- root/root 1448 2020-01-08 09:05 ./usr/share/doc/libfastahack-dev/copyright libfastahack0-dbgsym_1.0.0+dfsg-5_mips64el.deb ---------------------------------------------- new Debian package, version 2.0. size 237072 bytes: control archive=548 bytes. 406 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: libfastahack0-dbgsym Source: libfastahack Version: 1.0.0+dfsg-5 Auto-Built-Package: debug-symbols Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 256 Depends: libfastahack0 (= 1.0.0+dfsg-5) Section: debug Priority: optional Description: debug symbols for libfastahack0 Build-Ids: 9984e8cf15c9d5600c32d1c68cd0a814ea335435 drwxr-xr-x root/root 0 2020-01-10 18:40 ./ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/lib/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/lib/debug/.build-id/99/ -rw-r--r-- root/root 251192 2020-01-10 18:40 ./usr/lib/debug/.build-id/99/84e8cf15c9d5600c32d1c68cd0a814ea335435.debug drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/share/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-01-10 18:40 ./usr/share/doc/libfastahack0-dbgsym -> libfastahack0 libfastahack0_1.0.0+dfsg-5_mips64el.deb --------------------------------------- new Debian package, version 2.0. size 23324 bytes: control archive=2140 bytes. 1273 bytes, 29 lines control 242 bytes, 3 lines md5sums 45 bytes, 1 lines shlibs 6580 bytes, 57 lines symbols 65 bytes, 2 lines triggers Package: libfastahack0 Source: libfastahack Version: 1.0.0+dfsg-5 Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 83 Depends: libc6 (>= 2.4), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2) Section: libs Priority: optional Homepage: https://github.com/ekg/fastahack Description: library for indexing and sequence extraction from FASTA files (lib) fastahack is a small application for indexing and extracting sequences and subsequences from FASTA files. The included Fasta.cpp library provides a FASTA reader and indexer that can be embedded into applications which would benefit from directly reading subsequences from FASTA files. The library automatically handles index file generation and use. . Features: * FASTA index (.fai) generation for FASTA files * Sequence extraction * Subsequence extraction * Sequence statistics (currently only entropy is provided) . Sequence and subsequence extraction use fseek64 to provide fastest-possible extraction without RAM-intensive file loading operations. This makes fastahack a useful tool for bioinformaticists who need to quickly extract many subsequences from a reference FASTA sequence. . This package contains the dynamic library. drwxr-xr-x root/root 0 2020-01-10 18:40 ./ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/lib/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/lib/mips64el-linux-gnuabi64/ lrwxrwxrwx root/root 0 2020-01-10 18:40 ./usr/lib/mips64el-linux-gnuabi64/libfastahack.so.0 -> libfastahack.so.0.0.0 -rw-r--r-- root/root 62424 2020-01-10 18:40 ./usr/lib/mips64el-linux-gnuabi64/libfastahack.so.0.0.0 drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/share/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-01-10 18:40 ./usr/share/doc/libfastahack0/ -rw-r--r-- root/root 1179 2020-01-10 18:40 ./usr/share/doc/libfastahack0/changelog.Debian.gz -rw-r--r-- root/root 1448 2020-01-08 09:05 ./usr/share/doc/libfastahack0/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [556 B] Get:5 copy:/<>/apt_archive ./ Packages [647 B] Fetched 2166 B in 0s (82.7 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libcgi-pm-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcpanel-json-xs-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libxml-parser-perl libdata-dump-perl ca-certificates libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libperl4-corelibs-perl libauthen-sasl-perl libpackage-stash-xs-perl libunicode-utf8-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libcgi-pm-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcpanel-json-xs-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:mips64el t1utils 0 upgraded, 79 newly installed, 0 to remove and 0 not upgraded. Need to get 9526 kB of archives. After this operation, 27.1 MB of additional disk space will be used. 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[95.5 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.22-1 [369 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.26-1 [27.1 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1 [7642 B] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.10-1 [8362 B] Get:48 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amd64 libipc-run-perl all 20180523.0-2 [101 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004000-1 [12.5 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.53-1 [68.9 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b5 [63.6 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.003006-1 [58.7 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1 [10.2 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b2 [12.0 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1 [13.5 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.011+ds-1 [106 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.011+ds-1 [108 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.008001-2 [331 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.81+repack-1 [35.4 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2+b1 [91.4 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.57.0 [1300 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 9526 kB in 0s (48.4 MB/s) Selecting previously unselected package readline-common. (Reading database ... 20409 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.1_all.deb ... Unpacking netbase (6.1) ... Selecting previously unselected package diffstat. Preparing to unpack .../03-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../04-libassuan0_2.5.3-7_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.19-3_amd64.deb ... Unpacking gpgconf (2.2.19-3) ... Selecting previously unselected package libsqlite3-0:amd64. 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Setting up libapt-pkg-perl (0.1.36+b3) ... Setting up libstruct-dumb-perl (0.09-1) ... Setting up libdynaloader-functions-perl (0.003-1) ... Setting up libtext-glob-perl (0.10-1) ... Setting up libclass-method-modifiers-perl (2.13-1) ... Setting up liblist-compare-perl (0.53-1) ... Setting up libio-pty-perl (1:1.12-1) ... Setting up libclone-perl (0.43-2) ... Setting up libyaml-0-2:amd64 (0.2.2-1) ... Setting up libsub-identify-perl (0.14-1+b2) ... Setting up libcpanel-json-xs-perl (4.19-1) ... Setting up libssl1.1:amd64 (1.1.1e-1) ... Setting up libhtml-tagset-perl (3.20-4) ... Setting up libdevel-size-perl (0.83-1+b1) ... Setting up libsqlite3-0:amd64 (3.31.1-4) ... Setting up libfuture-perl (0.43-1) ... Setting up libyaml-libyaml-perl (0.81+repack-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up perl-openssl-defaults:amd64 (4) ... Setting up libtext-levenshtein-perl (0.13-1) ... Setting up libassuan0:amd64 (2.5.3-7) ... Setting up libsereal-encoder-perl (4.011+ds-1) ... Setting up libnumber-compare-perl (0.03-1) ... Setting up libio-async-perl (0.75-1) ... Setting up patchutils (0.3.4-2+b1) ... Setting up libjson-maybexs-perl (1.004000-1) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up libdigest-hmac-perl (1.03+dfsg-2) ... Setting up libipc-system-simple-perl (1.26-1) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up t1utils (1.41-3) ... Setting up liblinux-epoll-perl (0.017-1) ... Setting up diffstat (1.63-1) ... Setting up libvariable-magic-perl (0.62-1+b2) ... Setting up libb-hooks-op-check-perl (0.22-1+b2) ... Setting up libipc-run-perl (20180523.0-2) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3200-1) ... Setting up libsub-name-perl (0.26-1) ... Setting up libpath-tiny-perl (0.108-1) ... Setting up librole-tiny-perl (2.001004-1) ... Setting up netbase (6.1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b3) ... Setting up libexporter-tiny-perl (1.002001-1) ... Setting up libfont-ttf-perl (1.06-1) ... Setting up libnet-ip-perl (1.26-2) ... Setting up readline-common (8.0-4) ... Setting up libsereal-decoder-perl (4.011+ds-1) ... Setting up liburi-perl (1.76-2) ... Setting up libnet-ssleay-perl (1.88-2) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b5) ... Setting up libreadline8:amd64 (8.0-4) ... Setting up libtype-tiny-perl (1.008001-2) ... Setting up libnet-dns-perl (1.22-1) ... Setting up libdevel-callchecker-perl (0.008-1+b1) ... Setting up libio-async-loop-epoll-perl (0.20-1) ... Setting up libhtml-parser-perl (3.72-5) ... Setting up gpgconf (2.2.19-3) ... Setting up libio-socket-ssl-perl (2.067-1) ... Setting up gpg (2.2.19-3) ... Setting up libparams-classify-perl (0.015-1+b2) ... Setting up libcgi-pm-perl (4.46-1) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libmailtools-perl (2.21-1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libemail-valid-perl (1.202-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.003006-1) ... Setting up libmoox-aliases-perl (0.001006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.57.0) ... Setting up sbuild-build-depends-lintian-dummy:mips64el (0.invalid.0) ... Processing triggers for man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.30-2) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 15880 Build-Time: 33 Distribution: unstable Foreign Architectures: mips64el Host Architecture: mips64el Install-Time: 17 Job: libfastahack_1.0.0+dfsg-5 Lintian: pass Machine Architecture: amd64 Package: libfastahack Package-Time: 60 Source-Version: 1.0.0+dfsg-5 Space: 15880 Status: successful Version: 1.0.0+dfsg-5 -------------------------------------------------------------------------------- Finished at 2020-03-19T21:50:30Z Build needed 00:01:00, 15880k disk space