sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | libgclib 0.11.10+ds-2 (armel) Thu, 29 Oct 2020 18:17:28 +0000 | +==============================================================================+ Package: libgclib Version: 0.11.10+ds-2 Source Version: 0.11.10+ds-2 Distribution: unstable Machine Architecture: amd64 Host Architecture: armel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-1d30e2ca-f4b1-4700-b9e2-ae2a9ef7d842' with '<>' I: NOTICE: Log filtering will replace 'build/libgclib-sA0wfd/resolver-itARMg' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [734 B] Ign:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [734 B] Ign:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index Get:4 http://debian.oregonstate.edu/debian unstable/main armel Packages [8170 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources [8989 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 Packages [8492 kB] Fetched 25.8 MB in 4s (6816 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'libgclib' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libgclib.git Please use: git clone https://salsa.debian.org/med-team/libgclib.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 208 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main libgclib 0.11.10+ds-2 (dsc) [2176 B] Get:2 http://debian.oregonstate.edu/debian unstable/main libgclib 0.11.10+ds-2 (tar) [193 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main libgclib 0.11.10+ds-2 (diff) [13.0 kB] Fetched 208 kB in 0s (14.3 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/libgclib-sA0wfd/libgclib-0.11.10+ds' with '<>' I: NOTICE: Log filtering will replace 'build/libgclib-sA0wfd' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), d-shlibs, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel Filtered Build-Depends: debhelper-compat (= 13), d-shlibs, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [409 B] Get:5 copy:/<>/apt_archive ./ Packages [498 B] Fetched 1864 B in 0s (76.5 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdextrautils build-essential cpp-10-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-10-arm-linux-gnueabi gcc-10-arm-linux-gnueabi-base gcc-10-base:armel gcc-10-cross-base gcc-9-base:armel gcc-arm-linux-gnueabi gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armel libasan6-armel-cross libatomic1:armel libatomic1-armel-cross libc6:armel libc6-armel-cross libc6-dev libc6-dev:armel libc6-dev-armel-cross libcom-err2:armel libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:armel libcrypt1:armel libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-armel-cross libgcc-9-dev:armel libgcc-s1:armel libgcc-s1-armel-cross libglib2.0-0 libgomp1:armel libgomp1-armel-cross libgssapi-krb5-2:armel libicu67 libio-string-perl libk5crypto3:armel libkeyutils1:armel libkrb5-3:armel libkrb5support0:armel liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev libnsl-dev:armel libnsl2:armel libnss-nis:armel libnss-nisplus:armel libperl5.30 libpipeline1 libsigsegv2 libssl1.1:armel libstdc++-10-dev libstdc++-10-dev-armel-cross libstdc++-9-dev:armel libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtirpc-dev libtirpc-dev:armel libtirpc3:armel libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db perl perl-modules-5.30 po-debconf sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-10-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-10-multilib gcc-10-doc manpages-dev flex bison gdb-arm-linux-gnueabi gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armel libc-l10n:armel locales:armel glibc-doc manpages-dev:armel gnupg git bzr krb5-doc:armel krb5-user:armel libstdc++-10-doc libstdc++-9-doc:armel libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx libidn2-0:armel libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales:armel libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdextrautils build-essential cpp-10-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-10-arm-linux-gnueabi gcc-10-arm-linux-gnueabi-base gcc-10-base:armel gcc-10-cross-base gcc-9-base:armel gcc-arm-linux-gnueabi gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armel libasan6-armel-cross libatomic1:armel libatomic1-armel-cross libc6:armel libc6-armel-cross libc6-dev libc6-dev:armel libc6-dev-armel-cross libcom-err2:armel libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:armel libcrypt1:armel libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-armel-cross libgcc-9-dev:armel libgcc-s1:armel libgcc-s1-armel-cross libglib2.0-0 libgomp1:armel libgomp1-armel-cross libgssapi-krb5-2:armel libicu67 libio-string-perl libk5crypto3:armel libkeyutils1:armel libkrb5-3:armel libkrb5support0:armel liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev libnsl-dev:armel libnsl2:armel libnss-nis:armel libnss-nisplus:armel libperl5.30 libpipeline1 libsigsegv2 libssl1.1:armel libstdc++-10-dev libstdc++-10-dev-armel-cross libstdc++-9-dev:armel libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtirpc-dev libtirpc-dev:armel libtirpc3:armel libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db perl perl-modules-5.30 po-debconf sbuild-build-depends-main-dummy:armel sensible-utils ucf 0 upgraded, 113 newly installed, 0 to remove and 0 not upgraded. Need to get 97.4 MB of archives. After this operation, 399 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [924 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.36-3+b1 [140 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-5 [920 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.3-2 [1314 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.30 all 5.30.3-4 [2806 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.30 amd64 5.30.3-4 [4019 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.30.3-4 [290 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main armel gcc-10-base armel 10.2.0-15 [199 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main armel gcc-9-base armel 9.3.0-18 [197 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-5 [262 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-5 [120 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-5 [67.9 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.2-4 [801 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabi amd64 2.35.1-2 [2776 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.17-1 [104 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.2.6-3 [190 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.31-4 [2344 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev amd64 10.2.0-15 [1738 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10 amd64 10.2.0-15 [8669 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:10.2.0-1 [1644 B] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.5 [1473 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.5 [1909 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-arm-linux-gnueabi-base amd64 10.2.0-9cross1 [199 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-10-arm-linux-gnueabi amd64 10.2.0-9cross1 [7526 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabi amd64 4:10.2.0-1 [16.8 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3.1 [39.9 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10.2.0-9cross1 [195 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armel-cross all 2.31-1cross2 [1136 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-armel-cross all 10.2.0-9cross1 [38.3 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armel-cross all 10.2.0-9cross1 [85.0 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armel-cross all 10.2.0-9cross1 [8800 B] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-armel-cross all 10.2.0-9cross1 [292 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armel-cross all 10.2.0-9cross1 [368 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armel-cross all 10.2.0-9cross1 [114 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-10-dev-armel-cross all 10.2.0-9cross1 [688 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-arm-linux-gnueabi amd64 10.2.0-9cross1 [15.0 MB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabi amd64 4:10.2.0-1 [1456 B] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armel-cross all 5.7.6-1cross2 [1198 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armel-cross all 2.31-1cross2 [1936 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev-armel-cross all 10.2.0-9cross1 [1746 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10-arm-linux-gnueabi amd64 10.2.0-9cross1 [8190 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabi amd64 4:10.2.0-1 [1176 B] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-4 [8624 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-6.1 [692 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3.1 [38.9 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3.1 [49.9 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armel all 12.8 [6640 B] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 d-shlibs all 0.95 [17.8 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.2.1 [188 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.9.0-1 [15.2 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.181-1 [164 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.66.1-2 [1362 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.2.1 [1007 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main armel libgcc-s1 armel 10.2.0-15 [38.2 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main armel libcrypt1 armel 1:4.4.17-1 [96.3 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main armel libcom-err2 armel 1.45.6-1 [71.0 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main armel libkrb5support0 armel 1.17-10 [61.6 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main armel libk5crypto3 armel 1.17-10 [113 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main armel libkeyutils1 armel 1.6.1-2 [14.5 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main armel libssl1.1 armel 1.1.1h-1 [1274 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main armel libkrb5-3 armel 1.17-10 [321 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main armel libgssapi-krb5-2 armel 1.17-10 [135 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main armel libtirpc3 armel 1.2.6-3 [71.5 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main armel libnsl2 armel 1.3.0-2 [33.0 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main armel libnss-nis armel 3.1-4 [21.8 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main armel libnss-nisplus armel 1.3-4 [18.6 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main armel libc6 armel 2.31-4 [2335 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main armel libasan5 armel 9.3.0-18 [347 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main armel libatomic1 armel 10.2.0-15 [9016 B] Get:104 http://debian.oregonstate.edu/debian unstable/main armel linux-libc-dev armel 5.9.1-1 [1164 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main armel libcrypt-dev armel 1:4.4.17-1 [115 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main armel libtirpc-dev armel 1.2.6-3 [182 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main armel libnsl-dev armel 1.3.0-2 [61.7 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main armel libc6-dev armel 2.31-4 [1928 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main armel libgomp1 armel 10.2.0-15 [87.4 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main armel libstdc++6 armel 10.2.0-15 [408 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main armel libubsan1 armel 10.2.0-15 [115 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main armel libgcc-9-dev armel 9.3.0-18 [646 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main armel libstdc++-9-dev armel 9.3.0-18 [1746 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 97.4 MB in 1s (109 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10484 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.36-3+b1_amd64.deb ... Unpacking bsdextrautils (2.36-3+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../001-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-5_amd64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../003-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.3-2_amd64.deb ... Unpacking man-db (2.9.3-2) ... Selecting previously unselected package perl-modules-5.30. Preparing to unpack .../005-perl-modules-5.30_5.30.3-4_all.deb ... Unpacking perl-modules-5.30 (5.30.3-4) ... 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Selecting previously unselected package libgcc-9-dev:armel. Preparing to unpack .../110-libgcc-9-dev_9.3.0-18_armel.deb ... Unpacking libgcc-9-dev:armel (9.3.0-18) ... Selecting previously unselected package libstdc++-9-dev:armel. Preparing to unpack .../111-libstdc++-9-dev_9.3.0-18_armel.deb ... Unpacking libstdc++-9-dev:armel (9.3.0-18) ... Selecting previously unselected package sbuild-build-depends-main-dummy:armel. Preparing to unpack .../112-sbuild-build-depends-main-dummy_0.invalid.0_armel.deb ... Unpacking sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libpipeline1:amd64 (1.5.3-1) ... Setting up binutils-arm-linux-gnueabi (2.35.1-2) ... Setting up perl-modules-5.30 (5.30.3-4) ... Setting up bsdextrautils (2.36-3+b1) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-4) ... Setting up libmagic-mgc (1:5.38-5) ... Setting up libglib2.0-0:amd64 (2.66.1-2) ... No schema files found: doing nothing. Setting up libmagic1:amd64 (1:5.38-5) ... Setting up linux-libc-dev:armel (5.9.1-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.38-5) ... Setting up gcc-10-arm-linux-gnueabi-base:amd64 (10.2.0-9cross1) ... Setting up linux-libc-dev-armel-cross (5.7.6-1cross2) ... Setting up gcc-10-base:armel (10.2.0-15) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3.1) ... Setting up libtirpc-dev:amd64 (1.2.6-3) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up autopoint (0.19.8.1-10) ... Setting up d-shlibs (0.95) ... Setting up gcc-10-cross-base (10.2.0-9cross1) ... Setting up libc6-armel-cross (2.31-1cross2) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.17-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libperl5.30:amd64 (5.30.3-4) ... Setting up libc6-dev:amd64 (2.31-4) ... Setting up libc6-dev-armel-cross (2.31-1cross2) ... Setting up libelf1:amd64 (0.181-1) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.1) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up cpp-10-arm-linux-gnueabi (10.2.0-9cross1) ... Setting up gcc-9-base:armel (9.3.0-18) ... Setting up libstdc++-10-dev:amd64 (10.2.0-15) ... Setting up g++-10 (10.2.0-15) ... Setting up libgomp1-armel-cross (10.2.0-9cross1) ... Setting up libtool (2.4.6-14) ... Setting up libgcc-s1-armel-cross (10.2.0-9cross1) ... Setting up m4 (1.4.18-4) ... Setting up libstdc++6-armel-cross (10.2.0-9cross1) ... Setting up libatomic1-armel-cross (10.2.0-9cross1) ... Setting up perl (5.30.3-4) ... Setting up cpp-arm-linux-gnueabi (4:10.2.0-1) ... Setting up libubsan1-armel-cross (10.2.0-9cross1) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.5) ... Setting up autoconf (2.69-11.1) ... Setting up g++ (4:10.2.0-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up libsub-override-perl (0.09-2) ... Setting up libasan6-armel-cross (10.2.0-9cross1) ... Setting up automake (1:1.16.2-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up gettext (0.19.8.1-10) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libgcc-10-dev-armel-cross (10.2.0-9cross1) ... Setting up libdebhelper-perl (13.2.1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.20.5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up build-essential (12.8) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up gcc-10-arm-linux-gnueabi (10.2.0-9cross1) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up libstdc++-10-dev-armel-cross (10.2.0-9cross1) ... Setting up po-debconf (1.0.21) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up gcc-arm-linux-gnueabi (4:10.2.0-1) ... Setting up g++-10-arm-linux-gnueabi (10.2.0-9cross1) ... Setting up g++-arm-linux-gnueabi (4:10.2.0-1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3.1) ... Setting up dpkg-cross (2.6.15-3.1) ... Setting up crossbuild-essential-armel (12.8) ... Setting up libcrypt1:armel (1:4.4.17-1) ... Setting up libgcc-s1:armel (10.2.0-15) ... Setting up libcrypt-dev:armel (1:4.4.17-1) ... Setting up libtirpc3:armel (1.2.6-3) ... Setting up dh-autoreconf (19) ... Setting up libtirpc-dev:armel (1.2.6-3) ... Setting up libnsl2:armel (1.3.0-2) ... Setting up debhelper (13.2.1) ... Setting up libnss-nisplus:armel (1.3-4) ... Setting up libnss-nis:armel (3.1-4) ... Setting up libc6:armel (2.31-4) ... Setting up libnsl-dev:armel (1.3.0-2) ... Setting up libc6-dev:armel (2.31-4) ... Setting up libstdc++6:armel (10.2.0-15) ... Setting up libkeyutils1:armel (1.6.1-2) ... Setting up libssl1.1:armel (1.1.1h-1) ... Setting up libcom-err2:armel (1.45.6-1) ... Setting up libgomp1:armel (10.2.0-15) ... Setting up libkrb5support0:armel (1.17-10) ... Setting up libasan5:armel (9.3.0-18) ... Setting up libatomic1:armel (10.2.0-15) ... Setting up libk5crypto3:armel (1.17-10) ... Setting up libubsan1:armel (10.2.0-15) ... Setting up libkrb5-3:armel (1.17-10) ... Setting up libgcc-9-dev:armel (9.3.0-18) ... Setting up libgssapi-krb5-2:armel (1.17-10) ... Setting up libstdc++-9-dev:armel (9.3.0-18) ... Setting up sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Processing triggers for libc-bin (2.31-4) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armel included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-12-amd64 #1 SMP Debian 4.19.152-1 (2020-10-18) amd64 (x86_64) Toolchain package versions: binutils_2.35.1-2 dpkg-dev_1.20.5 g++-10_10.2.0-15 gcc-10_10.2.0-15 libc6-dev_2.31-4 libstdc++-10-dev_10.2.0-15 libstdc++-10-dev-armel-cross_10.2.0-9cross1 libstdc++-9-dev_9.3.0-18 libstdc++6_10.2.0-15 libstdc++6-armel-cross_10.2.0-9cross1 linux-libc-dev_5.9.1-1 Package versions: adduser_3.118 apt_2.1.11 autoconf_2.69-11.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.48 bash_5.1~rc1-2 binutils_2.35.1-2 binutils-arm-linux-gnueabi_2.35.1-2 binutils-common_2.35.1-2 binutils-x86-64-linux-gnu_2.35.1-2 bsdextrautils_2.36-3+b1 bsdutils_1:2.36-3+b1 build-essential_12.8 bzip2_1.0.8-4 coreutils_8.32-4+b1 cpp_4:10.2.0-1 cpp-10_10.2.0-15 cpp-10-arm-linux-gnueabi_10.2.0-9cross1 cpp-8_8.4.0-4 cpp-arm-linux-gnueabi_4:10.2.0-1 cross-config_2.6.15-3.1 crossbuild-essential-armel_12.8 d-shlibs_0.95 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2.1 debian-archive-keyring_2019.1 debianutils_4.11.2 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dpkg_1.20.5 dpkg-cross_2.6.15-3.1 dpkg-dev_1.20.5 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1 fdisk_2.36-3+b1 file_1:5.38-5 findutils_4.7.0+git20201010-2 g++_4:10.2.0-1 g++-10_10.2.0-15 g++-10-arm-linux-gnueabi_10.2.0-9cross1 g++-arm-linux-gnueabi_4:10.2.0-1 gcc_4:10.2.0-1 gcc-10_10.2.0-15 gcc-10-arm-linux-gnueabi_10.2.0-9cross1 gcc-10-arm-linux-gnueabi-base_10.2.0-9cross1 gcc-10-base_10.2.0-15 gcc-10-cross-base_10.2.0-9cross1 gcc-8-base_8.4.0-4 gcc-9-base_9.3.0-18 gcc-arm-linux-gnueabi_4:10.2.0-1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.1.11 libarchive-zip-perl_1.68-1 libasan5_9.3.0-18 libasan6_10.2.0-15 libasan6-armel-cross_10.2.0-9cross1 libatomic1_10.2.0-15 libatomic1-armel-cross_10.2.0-9cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3.1 libaudit1_1:2.8.5-3.1 libbinutils_2.35.1-2 libblkid1_2.36-3+b1 libbz2-1.0_1.0.8-4 libc-bin_2.31-4 libc-dev-bin_2.31-4 libc6_2.31-4 libc6-armel-cross_2.31-1cross2 libc6-dev_2.31-4 libc6-dev-armel-cross_2.31-1cross2 libcap-ng0_0.7.9-2.2 libcc1-0_10.2.0-15 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000003-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-2 libctf0_2.35.1-2 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.255 libdebhelper-perl_13.2.1 libdebian-dpkgcross-perl_2.6.15-3.1 libdpkg-perl_1.20.5 libelf1_0.181-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1 libfdisk1_2.36-3+b1 libffi6_3.2.1-9 libffi7_3.3-4 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.9.0-1 libfile-which-perl_1.23-1 libgcc-10-dev_10.2.0-15 libgcc-10-dev-armel-cross_10.2.0-9cross1 libgcc-9-dev_9.3.0-18 libgcc-s1_10.2.0-15 libgcc-s1-armel-cross_10.2.0-9cross1 libgcrypt20_1.8.7-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libglib2.0-0_2.66.1-2 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.15-4 libgomp1_10.2.0-15 libgomp1-armel-cross_10.2.0-9cross1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.17-10 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.6-2 libicu67_67.1-4 libidn2-0_2.3.0-1 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 libitm1_10.2.0-15 libk5crypto3_1.17-10 libkeyutils1_1.6.1-2 libkrb5-3_1.17-10 libkrb5support0_1.17-10 liblocale-gettext-perl_1.07-4 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xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: libgclib Binary: libgclib-dev, libgclib2 Architecture: any Version: 0.11.10+ds-2 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Andreas Tille , Michael R. Crusoe Homepage: https://github.com/gpertea/gclib Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/libgclib Vcs-Git: https://salsa.debian.org/med-team/libgclib.git Testsuite: autopkgtest Testsuite-Triggers: build-essential Build-Depends: debhelper-compat (= 13), d-shlibs Package-List: libgclib-dev deb libdevel optional arch=any libgclib2 deb libs optional arch=any Checksums-Sha1: 955d6d1e5ec91e183cc75aa03faadb72988ee4fb 192683 libgclib_0.11.10+ds.orig.tar.gz c90210c7f507ce6b8251cf9f30d76a1ebca811f3 13032 libgclib_0.11.10+ds-2.debian.tar.xz Checksums-Sha256: 883a31b4b29f62d1f9d319e0875b5ca4c3aba033e7b138c64286428f55ae50cc 192683 libgclib_0.11.10+ds.orig.tar.gz ca1d23b6bb9ec5ec1ae364cf5ba44319a133ae825a9f0e98fca8c9ffbdf525b4 13032 libgclib_0.11.10+ds-2.debian.tar.xz Files: fa9a22d3d4fba018662b77a748547c7f 192683 libgclib_0.11.10+ds.orig.tar.gz 7f151d8f323f3dee11c2554ae9aed51c 13032 libgclib_0.11.10+ds-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl+WnWIRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFhchAAlAaXGlob7RiRbi2dfxR2w0IrtKWQiUr3 AczmqX5DM+N9UcBIMmmxnGLihXDF39AuWDHWbA/G6zEg82M/QVNVjGUe/EOxxn3L i4c234K6tWQjct1giU5NB/+/EdLM4y9RKE3oGZ0UrHKetxBVE4TbZM2UhIRpD9Gu Snu22htMLysljuHLZg08v9BaE1FiLw6HIbS1dnZnt53ZPQ/52LcVVaV4qA2CNN6g C1yO/qoaRJfKiCy/hWr8aHIrY5lXJ+BfYmyMLEinwjp8UAt/MKnrUIHtmoMdkGsB w7lyBuR3KC674W5vvv1E94BfUU//6DJ+zNVCFU2zbEjNQ7TsypgFczbsegmlj5Mh za2PmmlHHnKGC+Ma2caDJhW5EOX+TbTQt4aZq4YvBJ79S8CgP6Gtmwpl7/f+JY6G axaOLCdguA62P4upImN/vM7c38CVB/CNo7aSa8xOB2HbN0pFIlHbKVAhMka1Ojuf SRTwjImJfrIFsWeAOi0Lf1Is9tIgM5OOKpM2w0FM6BCbzHbmxesF8DtLZQ1BByHO B2euVkpmEgLrCSE2pjvblZaVAbud0XlNK5YxqsRc7oMrPgBFlwueryGOj9KPFeXc DnecQIrhZTzp3BhrU5Uvaiy4Fx9g8GoTZ/HJnfufvLmjfhqjqt4x/DiAR+4RZNq0 LRG1O3rvh+0= =3o6U -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.FJLoCTyg/trustedkeys.kbx': General error gpgv: Signature made Mon Oct 26 09:56:50 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libgclib_0.11.10+ds-2.dsc dpkg-source: info: extracting libgclib in /<> dpkg-source: info: unpacking libgclib_0.11.10+ds.orig.tar.gz dpkg-source: info: unpacking libgclib_0.11.10+ds-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying autoconf.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-1d30e2ca-f4b1-4700-b9e2-ae2a9ef7d842 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarmel -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package libgclib dpkg-buildpackage: info: source version 0.11.10+ds-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabi does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armel debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' if [ -r Makefile -a -r Makefile.am ]; then dh_auto_clean; fi rm -f Makefile Makefile.in aclocal.m4 config.h.in configure debian/autoreconf.after debian/autoreconf.before find . -name "*.o" -delete make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a aclocal: warning: couldn't open directory 'config': No such file or directory libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'config'. libtoolize: copying file 'config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'config'. libtoolize: copying file 'config/libtool.m4' libtoolize: copying file 'config/ltoptions.m4' libtoolize: copying file 'config/ltsugar.m4' libtoolize: copying file 'config/ltversion.m4' libtoolize: copying file 'config/lt~obsolete.m4' libtoolize: Consider adding '-I config' to ACLOCAL_AMFLAGS in Makefile.am. configure.ac:30: installing 'config/compile' configure.ac:30: installing 'config/config.guess' configure.ac:30: installing 'config/config.sub' configure.ac:18: installing 'config/install-sh' configure.ac:18: installing 'config/missing' Makefile.am: installing 'config/depcomp' dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabi --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=arm-linux-gnueabi configure: loading site script /etc/dpkg-cross/cross-config.armel checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for arm-linux-gnueabi-strip... arm-linux-gnueabi-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether UID '1003' is supported by ustar format... yes checking whether GID '1003' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking whether ln -s works... yes checking build system type... x86_64-pc-linux-gnu checking host system type... arm-unknown-linux-gnueabi checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for arm-linux-gnueabi-gcc... arm-linux-gnueabi-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether arm-linux-gnueabi-gcc accepts -g... yes checking for arm-linux-gnueabi-gcc option to accept ISO C89... none needed checking whether arm-linux-gnueabi-gcc understands -c and -o together... yes checking dependency style of arm-linux-gnueabi-gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by arm-linux-gnueabi-gcc... /usr/arm-linux-gnueabi/bin/ld checking if the linker (/usr/arm-linux-gnueabi/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/arm-linux-gnueabi-nm -B checking the name lister (/usr/bin/arm-linux-gnueabi-nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to arm-unknown-linux-gnueabi format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/arm-linux-gnueabi/bin/ld option to reload object files... -r checking for arm-linux-gnueabi-objdump... arm-linux-gnueabi-objdump checking how to recognize dependent libraries... pass_all checking for arm-linux-gnueabi-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for arm-linux-gnueabi-ar... arm-linux-gnueabi-ar checking for archiver @FILE support... @ checking for arm-linux-gnueabi-strip... (cached) arm-linux-gnueabi-strip checking for arm-linux-gnueabi-ranlib... arm-linux-gnueabi-ranlib checking command to parse /usr/bin/arm-linux-gnueabi-nm -B output from arm-linux-gnueabi-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for arm-linux-gnueabi-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... arm-linux-gnueabi-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if arm-linux-gnueabi-gcc supports -fno-rtti -fno-exceptions... no checking for arm-linux-gnueabi-gcc option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabi-gcc PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabi-gcc static flag -static works... yes checking if arm-linux-gnueabi-gcc supports -c -o file.o... yes checking if arm-linux-gnueabi-gcc supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabi-gcc linker (/usr/arm-linux-gnueabi/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for arm-linux-gnueabi-g++... arm-linux-gnueabi-g++ checking whether we are using the GNU C++ compiler... yes checking whether arm-linux-gnueabi-g++ accepts -g... yes checking dependency style of arm-linux-gnueabi-g++... none checking how to run the C++ preprocessor... arm-linux-gnueabi-g++ -E checking for ld used by arm-linux-gnueabi-g++... /usr/arm-linux-gnueabi/bin/ld checking if the linker (/usr/arm-linux-gnueabi/bin/ld) is GNU ld... yes checking whether the arm-linux-gnueabi-g++ linker (/usr/arm-linux-gnueabi/bin/ld) supports shared libraries... yes checking for arm-linux-gnueabi-g++ option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabi-g++ PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabi-g++ static flag -static works... yes checking if arm-linux-gnueabi-g++ supports -c -o file.o... yes checking if arm-linux-gnueabi-g++ supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabi-g++ linker (/usr/arm-linux-gnueabi/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate ./configure: line 15960: AX_CXXFLAGS: command not found checking for ANSI C header files... (cached) yes checking for stdlib.h... (cached) yes checking whether make sets $(MAKE)... (cached) yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating libgclib.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-am make[2]: Entering directory '/<>' arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c -o mdtest.o mdtest.cpp /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c -o libgclib_la-codons.lo `test -f 'codons.cpp' || echo './'`codons.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c codons.cpp -fPIC -DPIC -o .libs/libgclib_la-codons.o libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c codons.cpp -o libgclib_la-codons.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c -o libgclib_la-GAlnExtend.lo `test -f 'GAlnExtend.cpp' || echo './'`GAlnExtend.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c GAlnExtend.cpp -fPIC -DPIC -o .libs/libgclib_la-GAlnExtend.o GAlnExtend.cpp:21:2: warning: extra ‘;’ [-Wpedantic] 21 | }; | ^ GAlnExtend.cpp:27:2: warning: extra ‘;’ [-Wpedantic] 27 | }; | ^ GAlnExtend.cpp:39:2: warning: extra ‘;’ [-Wpedantic] 39 | }; | ^ GAlnExtend.cpp:45:2: warning: extra ‘;’ [-Wpedantic] 45 | }; | ^ In file included from GList.hh:8, from GAlnExtend.h:7, from GAlnExtend.cpp:1: GVec.hh: In instantiation of ‘void GVec::setCapacity(int) [with OBJ = CSeqGap]’: GVec.hh:202:3: required from ‘GVec::GVec(int) [with OBJ = CSeqGap]’ GAlnExtend.h:347:86: required from here GVec.hh:291:15: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class CSeqGap’; use assignment or value-initialization instead [-Wclass-memaccess] 291 | memset(fArray+fCount, 0, (NewCapacity-fCount)*sizeof(OBJ)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from GAlnExtend.cpp:1: GAlnExtend.h:329:7: note: ‘class CSeqGap’ declared here 329 | class CSeqGap { // | ^~~~~~~ libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c GAlnExtend.cpp -o libgclib_la-GAlnExtend.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c -o libgclib_la-GapAssem.lo `test -f 'GapAssem.cpp' || echo './'`GapAssem.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c GapAssem.cpp -fPIC -DPIC -o .libs/libgclib_la-GapAssem.o libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c GapAssem.cpp -o libgclib_la-GapAssem.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c -o libgclib_la-GArgs.lo `test -f 'GArgs.cpp' || echo './'`GArgs.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c GArgs.cpp -fPIC -DPIC -o .libs/libgclib_la-GArgs.o libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c GArgs.cpp -o libgclib_la-GArgs.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c -o libgclib_la-GBase.lo `test -f 'GBase.cpp' || echo './'`GBase.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c GBase.cpp -fPIC -DPIC -o .libs/libgclib_la-GBase.o libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c GBase.cpp -o libgclib_la-GBase.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c -o libgclib_la-gcdb.lo `test -f 'gcdb.cpp' || echo './'`gcdb.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c gcdb.cpp -fPIC -DPIC -o .libs/libgclib_la-gcdb.o libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g 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-Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c GCdbYank.cpp -o libgclib_la-GCdbYank.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c -o libgclib_la-gdna.lo `test -f 'gdna.cpp' || echo './'`gdna.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c gdna.cpp -fPIC -DPIC -o .libs/libgclib_la-gdna.o libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c gdna.cpp -o libgclib_la-gdna.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c -o libgclib_la-GFaSeqGet.lo `test -f 'GFaSeqGet.cpp' || echo './'`GFaSeqGet.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c GFaSeqGet.cpp -fPIC -DPIC -o .libs/libgclib_la-GFaSeqGet.o libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c GFaSeqGet.cpp -o libgclib_la-GFaSeqGet.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c -o libgclib_la-GFastaIndex.lo `test -f 'GFastaIndex.cpp' || echo './'`GFastaIndex.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c GFastaIndex.cpp -fPIC -DPIC -o .libs/libgclib_la-GFastaIndex.o GFastaIndex.cpp: In member function ‘int GFastaIndex::loadIndex(const char*)’: GFastaIndex.cpp:55:22: warning: format ‘%d’ expects argument of type ‘int*’, but argument 3 has type ‘uint*’ {aka ‘unsigned int*’} [-Wformat=] 55 | sscanf(p, "%d%lld%d%d", &len, &offset, &line_len, &line_blen); | ~^ ~~~~ | | | | int* uint* {aka unsigned int*} | %d libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c GFastaIndex.cpp -o libgclib_la-GFastaIndex.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c -o libgclib_la-gff.lo `test -f 'gff.cpp' || echo './'`gff.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c gff.cpp -fPIC -DPIC -o .libs/libgclib_la-gff.o In file included from gff.cpp:1: gff.h:229:13: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 229 | struct { | ^ gff.h:232:13: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 232 | struct { | ^ gff.h:328:12: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 328 | struct { | ^ gff.h:691:14: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 691 | struct { | ^ gff.h:1150:12: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 1150 | struct { | ^ In file included from GList.hh:8, from GFastaIndex.h:12, from GFaSeqGet.h:3, from gff.h:9, from gff.cpp:1: GVec.hh: In instantiation of ‘void GVec::setCapacity(int) [with OBJ = GMapSeg]’: GVec.hh:202:3: required from ‘GVec::GVec(int) [with OBJ = GMapSeg]’ gff.h:127:50: required from here GVec.hh:291:15: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class GMapSeg’; use assignment or value-initialization instead [-Wclass-memaccess] 291 | memset(fArray+fCount, 0, (NewCapacity-fCount)*sizeof(OBJ)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from gff.cpp:1: gff.h:70:7: note: ‘class GMapSeg’ declared here 70 | class GMapSeg:public GSeg { | ^~~~~~~ In file included from GList.hh:8, from GFastaIndex.h:12, from GFaSeqGet.h:3, from gff.h:9, from gff.cpp:1: GVec.hh: In instantiation of ‘void GVec::setCapacity(int) [with OBJ = GSeg]’: GVec.hh:202:3: required from ‘GVec::GVec(int) [with OBJ = GSeg]’ gff.h:311:92: required from here GVec.hh:291:15: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class GSeg’; use assignment or value-initialization instead [-Wclass-memaccess] 291 | memset(fArray+fCount, 0, (NewCapacity-fCount)*sizeof(OBJ)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from gff.h:6, from gff.cpp:1: GBase.h:308:7: note: ‘class GSeg’ declared here 308 | class GSeg { | ^~~~ In file included from GList.hh:8, from GFastaIndex.h:12, from GFaSeqGet.h:3, from gff.h:9, from gff.cpp:1: GVec.hh: In instantiation of ‘void GVec::setCapacity(int) [with OBJ = GeneCDS]’: GVec.hh:202:3: required from ‘GVec::GVec(int) [with OBJ = GeneCDS]’ gff.h:1351:31: required from here GVec.hh:291:15: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class GeneCDS’; use assignment or value-initialization instead [-Wclass-memaccess] 291 | memset(fArray+fCount, 0, (NewCapacity-fCount)*sizeof(OBJ)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from gff.cpp:1: gff.h:1340:7: note: ‘class GeneCDS’ declared here 1340 | class GeneCDS: public GSeg { | ^~~~~~~ In file included from GList.hh:8, from GFastaIndex.h:12, from GFaSeqGet.h:3, from gff.h:9, from gff.cpp:1: GVec.hh: In instantiation of ‘void GVec::setCapacity(int) [with OBJ = GffExon]’: GVec.hh:202:3: required from ‘GVec::GVec(int) [with OBJ = GffExon]’ gff.cpp:2315:16: required from here GVec.hh:291:15: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class GffExon’; use assignment or value-initialization instead [-Wclass-memaccess] 291 | memset(fArray+fCount, 0, (NewCapacity-fCount)*sizeof(OBJ)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from gff.cpp:1: gff.h:629:7: note: ‘class GffExon’ declared here 629 | class GffExon : public GSeg { | ^~~~~~~ In file included from GList.hh:8, from GFastaIndex.h:12, from GFaSeqGet.h:3, from gff.h:9, from gff.cpp:1: GVec.hh: In instantiation of ‘void GVec::setCapacity(int) [with OBJ = GSegMatch]’: GVec.hh:202:3: required from ‘GVec::GVec(int) [with OBJ = GSegMatch]’ GList.hh:191:76: required from ‘GArray::GArray(int (*)(pointer, pointer)) [with OBJ = GSegMatch; GCompareProc = int(void*, void*); pointer = void*]’ gff.h:1351:31: required from here GVec.hh:291:15: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class GSegMatch’; use assignment or value-initialization instead [-Wclass-memaccess] 291 | memset(fArray+fCount, 0, (NewCapacity-fCount)*sizeof(OBJ)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from gff.cpp:1: gff.h:1328:7: note: ‘class GSegMatch’ declared here 1328 | class GSegMatch { //keep track of "matching" overlaps of a GeneCDSChain with multiple GeneSegment containers | ^~~~~~~~~ In file included from GList.hh:8, from GFastaIndex.h:12, from GFaSeqGet.h:3, from gff.h:9, from gff.cpp:1: GVec.hh: In instantiation of ‘void GVec::Grow(int, OBJ&) [with OBJ = GSegMatch]’: GVec.hh:437:9: required from ‘void GVec::Insert(int, OBJ*) [with OBJ = GSegMatch]’ GVec.hh:69:44: required from ‘void GVec::Insert(int, OBJ) [with OBJ = GSegMatch]’ GList.hh:234:21: required from ‘int GArray::Add(OBJ*) [with OBJ = GSegMatch]’ GList.hh:51:36: required from ‘int GArray::Add(OBJ&) [with OBJ = GSegMatch]’ gff.h:1364:22: required from here GVec.hh:358:15: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class GSegMatch’; use assignment or value-initialization instead [-Wclass-memaccess] 358 | memset(&newList[fCount+1], 0, (NewCapacity-fCount-1)*sizeof(OBJ)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from gff.cpp:1: gff.h:1328:7: note: ‘class GSegMatch’ declared here 1328 | class GSegMatch { //keep track of "matching" overlaps of a GeneCDSChain with multiple GeneSegment containers | ^~~~~~~~~ libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c gff.cpp -o libgclib_la-gff.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -c -o libgclib_la-gsocket.lo `test -f 'gsocket.cpp' || echo './'`gsocket.cpp libtool: compile: 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libgclib_la-gstopwatch.lo libgclib_la-GStr.lo libgclib_la-GThreads.lo libtool: link: arm-linux-gnueabi-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc-cross/arm-linux-gnueabi/10/../../../../arm-linux-gnueabi/lib/crti.o /usr/lib/gcc-cross/arm-linux-gnueabi/10/crtbeginS.o .libs/libgclib_la-codons.o .libs/libgclib_la-GAlnExtend.o .libs/libgclib_la-GapAssem.o .libs/libgclib_la-GArgs.o .libs/libgclib_la-GBase.o .libs/libgclib_la-gcdb.o .libs/libgclib_la-GCdbYank.o .libs/libgclib_la-gdna.o .libs/libgclib_la-GFaSeqGet.o .libs/libgclib_la-GFastaIndex.o .libs/libgclib_la-gff.o .libs/libgclib_la-gsocket.o .libs/libgclib_la-gstopwatch.o .libs/libgclib_la-GStr.o .libs/libgclib_la-GThreads.o -lpthread -L/usr/lib/gcc-cross/arm-linux-gnueabi/10 -L/usr/lib/gcc-cross/arm-linux-gnueabi/10/../../../../arm-linux-gnueabi/lib -L/lib/arm-linux-gnueabi -L/usr/lib/arm-linux-gnueabi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc-cross/arm-linux-gnueabi/10/crtendS.o 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libgclib_la-gff.o libgclib_la-gsocket.o libgclib_la-gstopwatch.o libgclib_la-GStr.o libgclib_la-GThreads.o libtool: link: arm-linux-gnueabi-ranlib .libs/libgclib.a libtool: link: ( cd ".libs" && rm -f "libgclib.la" && ln -s "../libgclib.la" "libgclib.la" ) /bin/bash ./libtool --tag=CXX --mode=link arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,-flto -o mdtest mdtest.o libgclib.la libtool: link: arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -D_FILE_OFFSET_BITS=64 -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,--as-needed -Wl,-flto -o .libs/mdtest mdtest.o ./.libs/libgclib.so make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/libgclib-0.11.10\+ds/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' make[2]: Entering directory '/<>' /bin/mkdir -p '/<>/debian/tmp/usr/lib/arm-linux-gnueabi' /bin/bash ./libtool --mode=install /usr/bin/install -c libgclib.la '/<>/debian/tmp/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/libgclib.so.2.0.0 /<>/debian/tmp/usr/lib/arm-linux-gnueabi/libgclib.so.2.0.0 libtool: install: (cd /<>/debian/tmp/usr/lib/arm-linux-gnueabi && { ln -s -f libgclib.so.2.0.0 libgclib.so.2 || { rm -f libgclib.so.2 && ln -s libgclib.so.2.0.0 libgclib.so.2; }; }) libtool: install: (cd /<>/debian/tmp/usr/lib/arm-linux-gnueabi && { ln -s -f libgclib.so.2.0.0 libgclib.so || { rm -f libgclib.so && ln -s libgclib.so.2.0.0 libgclib.so; }; }) libtool: install: /usr/bin/install -c .libs/libgclib.lai /<>/debian/tmp/usr/lib/arm-linux-gnueabi/libgclib.la libtool: install: /usr/bin/install -c .libs/libgclib.a /<>/debian/tmp/usr/lib/arm-linux-gnueabi/libgclib.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/arm-linux-gnueabi/libgclib.a libtool: install: arm-linux-gnueabi-ranlib /<>/debian/tmp/usr/lib/arm-linux-gnueabi/libgclib.a libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabi' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/bash ./libtool --mode=install /usr/bin/install -c mdtest '/<>/debian/tmp/usr/bin' libtool: warning: 'libgclib.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/mdtest /<>/debian/tmp/usr/bin/mdtest /bin/mkdir -p '/<>/debian/tmp/usr/include' /usr/bin/install -c -m 644 GAlnExtend.h GArgs.h GBam.h GBase.h GBitVec.h GCdbYank.h GFaSeqGet.h GFastaFile.h GFastaIndex.h GResUsage.h GStr.h GThreads.h GapAssem.h codons.h config.h gcdb.h gdimg.h gdna.h gff.h gsocket.h gstopwatch.h proc_mem.h GHash.hh GIntHash.hh GList.hh GVec.hh '/<>/debian/tmp/usr/include' /bin/mkdir -p '/<>/debian/tmp/usr/lib/arm-linux-gnueabi/pkgconfig' /usr/bin/install -c -m 644 libgclib.pc '/<>/debian/tmp/usr/lib/arm-linux-gnueabi/pkgconfig' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/tmp/usr/include usr \ --movedev "debian/tmp/usr/lib/*/pkgconfig/*.pc" usr/lib/arm-linux-gnueabi/pkgconfig \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility set -e install -d -m 755 debian/libgclib-dev/usr/lib/arm-linux-gnueabi install -d -m 755 debian/libgclib2/usr/lib/arm-linux-gnueabi mv debian/tmp/usr/lib/arm-linux-gnueabi/libgclib.a debian/libgclib-dev/usr/lib/arm-linux-gnueabi mv debian/tmp/usr/lib/arm-linux-gnueabi/libgclib.so debian/libgclib-dev/usr/lib/arm-linux-gnueabi mv /<>/debian/tmp/usr/lib/arm-linux-gnueabi/libgclib.so.2 debian/libgclib2/usr/lib/arm-linux-gnueabi mv /<>/debian/tmp/usr/lib/arm-linux-gnueabi/libgclib.so.2.0.0 debian/libgclib2/usr/lib/arm-linux-gnueabi PKGDEV=libgclib-dev PKGSHL=libgclib2 install -d -m 755 debian/libgclib-dev/usr mv debian/tmp/usr/include debian/libgclib-dev/usr install -d -m 755 debian/libgclib-dev/usr/lib/arm-linux-gnueabi/pkgconfig mv debian/tmp/usr/lib/*/pkgconfig/*.pc debian/libgclib-dev/usr/lib/arm-linux-gnueabi/pkgconfig mkdir debian/libgclib-dev/usr/include/gclib mv debian/libgclib-dev/usr/include/*.h* debian/libgclib-dev/usr/include/gclib sed -i '/PACKAGE_NAME/d' debian/libgclib-dev/usr/include/gclib/config.h # delete header files of not compiled C++ source files find debian/libgclib-dev -name gdimg.h -delete find debian/libgclib-dev -name GBam.h -delete make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a debian/rules override_dh_installexamples make[1]: Entering directory '/<>' dh_installexamples chmod a-x debian/libgclib-dev/usr/share/doc/libgclib-dev/examples/* make[1]: Leaving directory '/<>' dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a -a dh_strip -a -a dh_makeshlibs -a -a dh_shlibdeps -a -a dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libgclib2/usr/lib/arm-linux-gnueabi/libgclib.so.2.0.0 found in none of the libraries dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'libgclib-dev' in '../libgclib-dev_0.11.10+ds-2_armel.deb'. dpkg-deb: building package 'libgclib2' in '../libgclib2_0.11.10+ds-2_armel.deb'. dpkg-deb: building package 'libgclib2-dbgsym' in '../libgclib2-dbgsym_0.11.10+ds-2_armel.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../libgclib_0.11.10+ds-2_armel.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-10-29T18:18:42Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libgclib_0.11.10+ds-2_armel.changes: ------------------------------------ Format: 1.8 Date: Fri, 18 Sep 2020 11:07:12 +0200 Source: libgclib Binary: libgclib-dev libgclib2 libgclib2-dbgsym Built-For-Profiles: cross nocheck Architecture: armel Version: 0.11.10+ds-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: libgclib-dev - header files for Genome Code Lib (GCLib) libgclib2 - C++ library to handle biological short sequence data Closes: 968886 Changes: libgclib (0.11.10+ds-2) unstable; urgency=medium . * Provide symbols only for amd64 Closes: #968886 Checksums-Sha1: dd5d7fa18f6d6b58399ba3a35ff3b5ba5354b08e 80988 libgclib-dev_0.11.10+ds-2_armel.deb 13e7816eec7b3c397fb6fa67c683107786a33e6f 485168 libgclib2-dbgsym_0.11.10+ds-2_armel.deb 8543954fc896e6d810b94a1b7912522c2675b7fb 113912 libgclib2_0.11.10+ds-2_armel.deb 69393f566638ad99f6fa1cac87f78b5b956a3cc0 5686 libgclib_0.11.10+ds-2_armel.buildinfo Checksums-Sha256: 9277783e8a8bab060f3b09ffce52428c018c7cb1a45fba1197bf89d64c66f1e8 80988 libgclib-dev_0.11.10+ds-2_armel.deb a5d32d336ac089589dc9811b0c6dfa344472ab3968d52568018d84c40c1c880c 485168 libgclib2-dbgsym_0.11.10+ds-2_armel.deb 30527c615315c9b778b29af4edc57e17bd289a85bee12d08e63aa20a462fe82d 113912 libgclib2_0.11.10+ds-2_armel.deb 407cb0feb8c907485dc9bacaedbcf85ace9c72b2c30157fe2bfc6b1051c0b160 5686 libgclib_0.11.10+ds-2_armel.buildinfo Files: 0bdd55d6fec88109317d86e59fc000b2 80988 libdevel optional libgclib-dev_0.11.10+ds-2_armel.deb c1b74108aca8c6065b717051af6b92e6 485168 debug optional libgclib2-dbgsym_0.11.10+ds-2_armel.deb 998bfb9ff9c211b8c638deacf359e7eb 113912 libs optional libgclib2_0.11.10+ds-2_armel.deb 6d9d1abb20eff87c2b7f12e37881d798 5686 science optional libgclib_0.11.10+ds-2_armel.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: libgclib Binary: libgclib-dev libgclib2 libgclib2-dbgsym Architecture: armel Version: 0.11.10+ds-2 Checksums-Md5: 0bdd55d6fec88109317d86e59fc000b2 80988 libgclib-dev_0.11.10+ds-2_armel.deb c1b74108aca8c6065b717051af6b92e6 485168 libgclib2-dbgsym_0.11.10+ds-2_armel.deb 998bfb9ff9c211b8c638deacf359e7eb 113912 libgclib2_0.11.10+ds-2_armel.deb Checksums-Sha1: dd5d7fa18f6d6b58399ba3a35ff3b5ba5354b08e 80988 libgclib-dev_0.11.10+ds-2_armel.deb 13e7816eec7b3c397fb6fa67c683107786a33e6f 485168 libgclib2-dbgsym_0.11.10+ds-2_armel.deb 8543954fc896e6d810b94a1b7912522c2675b7fb 113912 libgclib2_0.11.10+ds-2_armel.deb Checksums-Sha256: 9277783e8a8bab060f3b09ffce52428c018c7cb1a45fba1197bf89d64c66f1e8 80988 libgclib-dev_0.11.10+ds-2_armel.deb a5d32d336ac089589dc9811b0c6dfa344472ab3968d52568018d84c40c1c880c 485168 libgclib2-dbgsym_0.11.10+ds-2_armel.deb 30527c615315c9b778b29af4edc57e17bd289a85bee12d08e63aa20a462fe82d 113912 libgclib2_0.11.10+ds-2_armel.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Thu, 29 Oct 2020 18:18:41 +0000 Build-Path: /<> Installed-Build-Depends: adduser (= 3.118), apt (= 2.1.11), autoconf (= 2.69-11.1), automake (= 1:1.16.2-4), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.48), bash (= 5.1~rc1-2), binutils (= 2.35.1-2), binutils-common (= 2.35.1-2), binutils-x86-64-linux-gnu (= 2.35.1-2), bsdextrautils (= 2.36-3+b1), bsdutils (= 1:2.36-3+b1), build-essential (= 12.8), bzip2 (= 1.0.8-4), coreutils (= 8.32-4+b1), cpp (= 4:10.2.0-1), cpp-10 (= 10.2.0-15), d-shlibs (= 0.95), dash (= 0.5.10.2-7), debconf (= 1.5.74), debhelper (= 13.2.1), debian-archive-keyring (= 2019.1), debianutils (= 4.11.2), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.9.0-1), diffutils (= 1:3.7-3), dpkg (= 1.20.5), dpkg-dev (= 1.20.5), dwz (= 0.13-5), file (= 1:5.38-5), findutils (= 4.7.0+git20201010-2), g++ (= 4:10.2.0-1), g++-10 (= 10.2.0-15), gcc (= 4:10.2.0-1), gcc-10 (= 10.2.0-15), gcc-10-base (= 10.2.0-15), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), gpgv (= 2.2.20-1), grep (= 3.4-1), groff-base (= 1.22.4-5), gzip (= 1.10-2), hostname (= 3.23), init-system-helpers (= 1.58), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libapt-pkg6.0 (= 2.1.11), libarchive-zip-perl (= 1.68-1), libasan6 (= 10.2.0-15), libatomic1 (= 10.2.0-15), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3.1), libaudit1 (= 1:2.8.5-3.1), libbinutils (= 2.35.1-2), libblkid1 (= 2.36-3+b1), libbz2-1.0 (= 1.0.8-4), libc-bin (= 2.31-4), libc-dev-bin (= 2.31-4), libc6 (= 2.31-4), libc6-dev (= 2.31-4), libcap-ng0 (= 0.7.9-2.2), libcc1-0 (= 10.2.0-15), libcom-err2 (= 1.45.6-1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.17-1), libcrypt1 (= 1:4.4.17-1), libctf-nobfd0 (= 2.35.1-2), libctf0 (= 2.35.1-2), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.255), libdebhelper-perl (= 13.2.1), libdpkg-perl (= 1.20.5), libelf1 (= 0.181-1), libffi7 (= 3.3-4), libfile-stripnondeterminism-perl (= 1.9.0-1), libgcc-10-dev (= 10.2.0-15), libgcc-s1 (= 10.2.0-15), libgcrypt20 (= 1.8.7-2), libgdbm-compat4 (= 1.18.1-5.1), libgdbm6 (= 1.18.1-5.1), libglib2.0-0 (= 2.66.1-2), libgmp10 (= 2:6.2.0+dfsg-6), libgnutls30 (= 3.6.15-4), libgomp1 (= 10.2.0-15), libgpg-error0 (= 1.38-2), libgssapi-krb5-2 (= 1.17-10), libhogweed6 (= 3.6-2), libicu67 (= 67.1-4), libidn2-0 (= 2.3.0-1), libisl22 (= 0.22.1-1), libitm1 (= 10.2.0-15), libk5crypto3 (= 1.17-10), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.17-10), libkrb5support0 (= 1.17-10), liblsan0 (= 10.2.0-15), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-5), libmagic1 (= 1:5.38-5), libmount1 (= 2.36-3+b1), libmpc3 (= 1.2.0-1), libmpfr6 (= 4.1.0-3), libnettle8 (= 3.6-2), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libnss-nis (= 3.1-4), libnss-nisplus (= 1.3-4), libp11-kit0 (= 0.23.21-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-13), libperl5.30 (= 5.30.3-4), libpipeline1 (= 1.5.3-1), libquadmath0 (= 10.2.0-15), libseccomp2 (= 2.4.4-1+b1), libselinux1 (= 3.1-2+b1), libsemanage-common (= 3.1-1), libsemanage1 (= 3.1-1+b1), libsepol1 (= 3.1-1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.36-3+b1), libssl1.1 (= 1.1.1h-1), libstdc++-10-dev (= 10.2.0-15), libstdc++6 (= 10.2.0-15), libsub-override-perl (= 0.09-2), libsystemd0 (= 246.6-2), libtasn1-6 (= 4.16.0-2), libtinfo6 (= 6.2+20200918-1), libtirpc-common (= 1.2.6-3), libtirpc-dev (= 1.2.6-3), libtirpc3 (= 1.2.6-3), libtool (= 2.4.6-14), libtsan0 (= 10.2.0-15), libubsan1 (= 10.2.0-15), libuchardet0 (= 0.0.7-1), libudev1 (= 246.6-2), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36-3+b1), libxml2 (= 2.9.10+dfsg-6.1), libzstd1 (= 1.4.5+dfsg-4), linux-libc-dev (= 5.9.1-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.3-4), man-db (= 2.9.3-2), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2+20200918-1), ncurses-bin (= 6.2+20200918-1), passwd (= 1:4.8.1-1), patch (= 2.7.6-6), perl (= 5.30.3-4), perl-base (= 5.30.3-4), perl-modules-5.30 (= 5.30.3-4), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-5), tar (= 1.30+dfsg-7), util-linux (= 2.36-3+b1), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1600420032" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libgclib-dev_0.11.10+ds-2_armel.deb ----------------------------------- new Debian package, version 2.0. size 80988 bytes: control archive=1848 bytes. 1230 bytes, 27 lines control 1874 bytes, 29 lines md5sums Package: libgclib-dev Source: libgclib Version: 0.11.10+ds-2 Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 353 Depends: libgclib2 (= 0.11.10+ds-2) Section: libdevel Priority: optional Multi-Arch: same Homepage: https://github.com/gpertea/gclib Description: header files for Genome Code Lib (GCLib) This is an eclectic gathering of (mostly) C++ code which upstream used for some bioinformatics projects. The main idea is to provide lean code and efficient data structures, trying to avoid too many code dependencies of heavy libraries while minimizing production cycles (and this also implies a decent compile/build time -- looking at you, bloated configure scripts and lengthy compile times of Boost code or other heavy C++ template code..). . This code was gathered even before the C++ STL had been fully adopted as a cross-platform "standard". Since STL by itself is a bit heavier for most of the C++ needs, it is preferred to use simpler&leaner C++ classes or templates for basic strings, containers, basic algorithms etc. . Header files of Genome Code Lib. It is mainly known for being used by StringTie but with its own release cycle. drwxr-xr-x root/root 0 2020-09-18 09:07 ./ drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/ drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/include/ drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/include/gclib/ -rw-r--r-- root/root 25377 2020-09-18 09:07 ./usr/include/gclib/GAlnExtend.h -rw-r--r-- root/root 4020 2020-09-18 09:07 ./usr/include/gclib/GArgs.h -rw-r--r-- root/root 21603 2020-09-18 09:07 ./usr/include/gclib/GBase.h -rw-r--r-- root/root 13416 2020-09-18 09:07 ./usr/include/gclib/GBitVec.h -rw-r--r-- root/root 1952 2020-09-18 09:07 ./usr/include/gclib/GCdbYank.h -rw-r--r-- root/root 10695 2020-09-18 09:07 ./usr/include/gclib/GFaSeqGet.h -rw-r--r-- root/root 24292 2020-09-18 09:07 ./usr/include/gclib/GFastaFile.h -rw-r--r-- root/root 2011 2020-09-18 09:07 ./usr/include/gclib/GFastaIndex.h -rw-r--r-- root/root 16741 2020-09-18 09:07 ./usr/include/gclib/GHash.hh -rw-r--r-- root/root 12378 2020-09-18 09:07 ./usr/include/gclib/GIntHash.hh -rw-r--r-- root/root 21924 2020-09-18 09:07 ./usr/include/gclib/GList.hh -rw-r--r-- root/root 1569 2020-09-18 09:07 ./usr/include/gclib/GResUsage.h -rw-r--r-- root/root 9706 2020-09-18 09:07 ./usr/include/gclib/GStr.h -rw-r--r-- root/root 24664 2020-09-18 09:07 ./usr/include/gclib/GThreads.h -rw-r--r-- root/root 26609 2020-09-18 09:07 ./usr/include/gclib/GVec.hh -rw-r--r-- root/root 15220 2020-09-18 09:07 ./usr/include/gclib/GapAssem.h -rw-r--r-- root/root 1149 2020-09-18 09:07 ./usr/include/gclib/codons.h -rw-r--r-- root/root 1760 2020-09-18 09:07 ./usr/include/gclib/config.h -rw-r--r-- root/root 13832 2020-09-18 09:07 ./usr/include/gclib/gcdb.h -rw-r--r-- root/root 435 2020-09-18 09:07 ./usr/include/gclib/gdna.h -rw-r--r-- root/root 51251 2020-09-18 09:07 ./usr/include/gclib/gff.h -rw-r--r-- root/root 9393 2020-09-18 09:07 ./usr/include/gclib/gsocket.h -rw-r--r-- root/root 629 2020-09-18 09:07 ./usr/include/gclib/gstopwatch.h -rw-r--r-- root/root 241 2020-09-18 09:07 ./usr/include/gclib/proc_mem.h drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/lib/ drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/lib/arm-linux-gnueabi/ -rw-r--r-- root/root 7914 2020-09-18 09:07 ./usr/lib/arm-linux-gnueabi/libgclib.a lrwxrwxrwx root/root 0 2020-09-18 09:07 ./usr/lib/arm-linux-gnueabi/libgclib.so -> libgclib.so.2.0.0 drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/lib/arm-linux-gnueabi/pkgconfig/ -rw-r--r-- root/root 247 2020-09-18 09:07 ./usr/lib/arm-linux-gnueabi/pkgconfig/libgclib.pc drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/share/ drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/share/doc/libgclib-dev/ -rw-r--r-- root/root 1070 2020-09-18 09:07 ./usr/share/doc/libgclib-dev/changelog.Debian.gz -rw-r--r-- root/root 10318 2020-09-18 09:07 ./usr/share/doc/libgclib-dev/copyright drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/share/doc/libgclib-dev/examples/ -rw-r--r-- root/root 1372 2020-07-25 15:54 ./usr/share/doc/libgclib-dev/examples/mdtest.cpp libgclib2-dbgsym_0.11.10+ds-2_armel.deb --------------------------------------- new Debian package, version 2.0. size 485168 bytes: control archive=556 bytes. 404 bytes, 13 lines control 106 bytes, 1 lines md5sums Package: libgclib2-dbgsym Source: libgclib Version: 0.11.10+ds-2 Auto-Built-Package: debug-symbols Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 551 Depends: libgclib2 (= 0.11.10+ds-2) Section: debug Priority: optional Multi-Arch: same Description: debug symbols for libgclib2 Build-Ids: 129887ad1f6fa87c51b0382d3e53904bc174c792 drwxr-xr-x root/root 0 2020-09-18 09:07 ./ drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/ drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/lib/ drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/lib/debug/.build-id/12/ -rw-r--r-- root/root 553496 2020-09-18 09:07 ./usr/lib/debug/.build-id/12/9887ad1f6fa87c51b0382d3e53904bc174c792.debug drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/share/ drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-09-18 09:07 ./usr/share/doc/libgclib2-dbgsym -> libgclib2 libgclib2_0.11.10+ds-2_armel.deb -------------------------------- new Debian package, version 2.0. size 113912 bytes: control archive=1196 bytes. 1145 bytes, 24 lines control 224 bytes, 3 lines md5sums 37 bytes, 1 lines shlibs 67 bytes, 2 lines triggers Package: libgclib2 Source: libgclib Version: 0.11.10+ds-2 Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 310 Depends: libc6 (>= 2.7), libgcc-s1 (>= 3.5), libstdc++6 (>= 5) Section: libs Priority: optional Multi-Arch: same Homepage: https://github.com/gpertea/gclib Description: C++ library to handle biological short sequence data This is an eclectic gathering of (mostly) C++ code which upstream used for some bioinformatics projects. The main idea is to provide lean code and efficient data structures, trying to avoid too many code dependencies of heavy libraries while minimizing production cycles (and this also implies a decent compile/build time -- looking at you, bloated configure scripts and lengthy compile times of Boost code or other heavy C++ template code..). . This code was gathered even before the C++ STL had been fully adopted as a cross-platform "standard". Since STL by itself is a bit heavier for most of the C++ needs, it is preferred to use simpler&leaner C++ classes or templates for basic strings, containers, basic algorithms etc. drwxr-xr-x root/root 0 2020-09-18 09:07 ./ drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/ drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/lib/ drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/lib/arm-linux-gnueabi/ lrwxrwxrwx root/root 0 2020-09-18 09:07 ./usr/lib/arm-linux-gnueabi/libgclib.so.2 -> libgclib.so.2.0.0 -rw-r--r-- root/root 292360 2020-09-18 09:07 ./usr/lib/arm-linux-gnueabi/libgclib.so.2.0.0 drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/share/ drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-09-18 09:07 ./usr/share/doc/libgclib2/ -rw-r--r-- root/root 1070 2020-09-18 09:07 ./usr/share/doc/libgclib2/changelog.Debian.gz -rw-r--r-- root/root 10318 2020-09-18 09:07 ./usr/share/doc/libgclib2/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [539 B] Get:5 copy:/<>/apt_archive ./ Packages [628 B] Fetched 2130 B in 0s (84.6 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common sbuild-build-depends-lintian-dummy:armel t1utils unzip 0 upgraded, 89 newly installed, 0 to remove and 0 not upgraded. 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[12.7 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.8-1 [198 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b2 [75.1 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-1 [39.2 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.010006-1 [339 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b1 [20.2 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 5.05-1 [90.3 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.82+repack-1 [35.6 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.21-8 [84.3 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-1 [83.4 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-25 [172 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.99.0 [1266 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7517 kB in 0s (32.6 MB/s) Selecting previously unselected package readline-common. (Reading database ... 20973 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.3-7.1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7.1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../04-gpgconf_2.2.20-1_amd64.deb ... Unpacking gpgconf (2.2.20-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../05-libsqlite3-0_3.33.0-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.33.0-1) ... Selecting previously unselected package gpg. 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Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.99.0) ... Setting up sbuild-build-depends-lintian-dummy:armel (0.invalid.0) ... Processing triggers for man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.31-4) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 16412 Build-Time: 42 Distribution: unstable Foreign Architectures: armel Host Architecture: armel Install-Time: 20 Job: libgclib_0.11.10+ds-2 Lintian: pass Machine Architecture: amd64 Package: libgclib Package-Time: 74 Source-Version: 0.11.10+ds-2 Space: 16412 Status: successful Version: 0.11.10+ds-2 -------------------------------------------------------------------------------- Finished at 2020-10-29T18:18:42Z Build needed 00:01:14, 16412k disk space