sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | libgclib 0.11.3-1 (armhf) Fri, 08 Nov 2019 00:31:15 +0000 | +==============================================================================+ Package: libgclib Version: 0.11.3-1 Source Version: 0.11.3-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-522eac3a-e18a-40bf-8356-483d7919ded9' with '<>' I: NOTICE: Log filtering will replace 'build/libgclib-Sw1fJL/resolver-nBY9rh' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [139 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-11-07-0813.42.pdiff [3590 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-11-07-1413.06.pdiff [10.5 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2019-11-07-2014.59.pdiff [15.9 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2019-11-07-2014.59.pdiff [15.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-11-07-0813.42.pdiff [2693 B] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-11-07-1413.06.pdiff [11.7 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-11-07-2014.59.pdiff [24.9 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-11-07-2014.59.pdiff [24.9 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main armhf Packages [7958 kB] Fetched 8222 kB in 2s (4213 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: hostname 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 14.9 kB of archives. After this operation, 1024 B disk space will be freed. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 hostname amd64 3.23 [14.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 14.9 kB in 0s (0 B/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14998 files and directories currently installed.) Preparing to unpack .../hostname_3.23_amd64.deb ... Unpacking hostname (3.23) over (3.22+b1) ... Setting up hostname (3.23) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'libgclib' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libgclib.git Please use: git clone https://salsa.debian.org/med-team/libgclib.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 204 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main libgclib 0.11.3-1 (dsc) [2130 B] Get:2 http://debian.oregonstate.edu/debian unstable/main libgclib 0.11.3-1 (tar) [189 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main libgclib 0.11.3-1 (diff) [13.2 kB] Fetched 204 kB in 1s (387 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/libgclib-Sw1fJL/libgclib-0.11.3' with '<>' I: NOTICE: Log filtering will replace 'build/libgclib-Sw1fJL' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), d-shlibs, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf Filtered Build-Depends: debhelper-compat (= 12), d-shlibs, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [410 B] Get:5 copy:/<>/apt_archive ./ Packages [498 B] Fetched 1865 B in 0s (96.2 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdmainutils cpp-9-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-9-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-9-arm-linux-gnueabihf gcc-9-arm-linux-gnueabihf-base gcc-9-base:armhf gcc-9-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libasan5-armhf-cross libatomic1:armhf libatomic1-armhf-cross libbsd0 libc6:armhf libc6-armhf-cross libc6-dev:armhf libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:armhf libgcc-9-dev-armhf-cross libgcc1:armhf libgcc1-armhf-cross libglib2.0-0 libgomp1:armhf libgomp1-armhf-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libpipeline1 libsigsegv2 libstdc++-9-dev:armhf libstdc++-9-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db po-debconf sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican | wordlist whois vacation gcc-9-locales cpp-doc dh-make binutils-multiarch gcc-9-doc libstdc++6-9-dbg-armhf-cross libgcc1-dbg-armhf-cross libgomp1-dbg-armhf-cross libitm1-dbg-armhf-cross libatomic1-dbg-armhf-cross libasan5-dbg-armhf-cross liblsan0-dbg-armhf-cross libtsan0-dbg-armhf-cross libubsan1-dbg-armhf-cross libquadmath0-dbg-armhf-cross manpages-dev flex bison gdb-arm-linux-gnueabihf gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armhf libc-l10n:armhf locales:armhf manpages-dev:armhf libstdc++-9-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:armhf libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpm2 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdmainutils cpp-9-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-9-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-9-arm-linux-gnueabihf gcc-9-arm-linux-gnueabihf-base gcc-9-base:armhf gcc-9-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libasan5-armhf-cross libatomic1:armhf libatomic1-armhf-cross libbsd0 libc6:armhf libc6-armhf-cross libc6-dev:armhf libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:armhf libgcc-9-dev-armhf-cross libgcc1:armhf libgcc1-armhf-cross libglib2.0-0 libgomp1:armhf libgomp1-armhf-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libpipeline1 libsigsegv2 libstdc++-9-dev:armhf libstdc++-9-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:armhf sensible-utils ucf 0 upgraded, 86 newly installed, 0 to remove and 0 not upgraded. Need to get 61.8 MB of archives. After this operation, 239 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [924 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.0-1 [1307 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main armhf gcc-9-base armhf 9.2.1-17 [194 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.37-6 [253 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.37-6 [119 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.37-6 [67.2 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabihf amd64 2.33.1-2 [2721 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-arm-linux-gnueabihf-base amd64 9.2.1-15cross1 [194 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-arm-linux-gnueabihf amd64 9.2.1-15cross1 [6813 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabihf amd64 4:9.2.1-3.1 [16.7 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base all 9.2.1-15cross1 [189 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armhf-cross all 2.29-1cross7 [1122 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-armhf-cross all 1:9.2.1-15cross1 [37.3 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armhf-cross all 9.2.1-15cross1 [73.2 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armhf-cross all 9.2.1-15cross1 [6692 B] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-armhf-cross all 9.2.1-15cross1 [363 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armhf-cross all 9.2.1-15cross1 [392 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armhf-cross all 9.2.1-15cross1 [112 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-armhf-cross all 9.2.1-15cross1 [662 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-arm-linux-gnueabihf amd64 9.2.1-15cross1 [7152 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabihf amd64 4:9.2.1-3.1 [1476 B] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armhf-cross all 5.2.9-2cross7 [1312 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armhf-cross all 2.29-1cross7 [2122 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-armhf-cross all 9.2.1-15cross1 [1720 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-arm-linux-gnueabihf amd64 9.2.1-15cross1 [7387 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabihf amd64 4:9.2.1-3.1 [1184 B] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-2 [8301 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1+b1 [344 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.29-1 [67.4 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armhf all 12.8 [6644 B] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 d-shlibs all 0.88 [17.4 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-11 [547 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 12.7.1 [173 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.67-1 [104 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.6.2-1 [23.6 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.6.2-1 [14.6 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-2 [145 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.62.2-3 [1318 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20191019-1 [102 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.7.1 [997 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main armhf libgcc1 armhf 1:9.2.1-17 [37.3 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main armhf libc6 armhf 2.29-3 [2340 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main armhf libasan5 armhf 9.2.1-17 [369 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main armhf libatomic1 armhf 9.2.1-17 [6872 B] Get:80 http://debian.oregonstate.edu/debian unstable/main armhf linux-libc-dev armhf 5.3.7-1 [977 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main armhf libc6-dev armhf 2.29-3 [2141 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main armhf libgomp1 armhf 9.2.1-17 [75.1 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++6 armhf 9.2.1-17 [431 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main armhf libubsan1 armhf 9.2.1-17 [113 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-9-dev armhf 9.2.1-17 [663 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++-9-dev armhf 9.2.1-17 [1751 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 61.8 MB in 1s (65.1 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 14997 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.9.0-1_amd64.deb ... Unpacking man-db (2.9.0-1) ... 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Preparing to unpack .../85-sbuild-build-depends-main-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up libfile-which-perl (1.23-1) ... Setting up libc6-armhf-cross (2.29-1cross7) ... Setting up libmagic-mgc (1:5.37-6) ... Setting up libarchive-zip-perl (1.67-1) ... Setting up libglib2.0-0:amd64 (2.62.2-3) ... No schema files found: doing nothing. Setting up libdebhelper-perl (12.7.1) ... Setting up libmagic1:amd64 (1:5.37-6) ... Setting up linux-libc-dev:armhf (5.3.7-1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.37-6) ... Setting up libyaml-perl (1.29-1) ... Setting up libicu63:amd64 (63.2-2) ... Setting up gcc-9-arm-linux-gnueabihf-base:amd64 (9.2.1-15cross1) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3) ... Setting up libncurses6:amd64 (6.1+20191019-1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up linux-libc-dev-armhf-cross (5.2.9-2cross7) ... Setting up autopoint (0.19.8.1-9) ... Setting up d-shlibs (0.88) ... Setting up gcc-9-cross-base (9.2.1-15cross1) ... Setting up sensible-utils (0.0.12) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up binutils-arm-linux-gnueabihf (2.33.1-2) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up gcc-9-base:armhf (9.2.1-17) ... Setting up libgomp1-armhf-cross (9.2.1-15cross1) ... Setting up libfile-stripnondeterminism-perl (1.6.2-1) ... Setting up libtool (2.4.6-11) ... Setting up cpp-9-arm-linux-gnueabihf (9.2.1-15cross1) ... Setting up libc6-dev-armhf-cross (2.29-1cross7) ... Setting up m4 (1.4.18-4) ... Setting up libatomic1-armhf-cross (9.2.1-15cross1) ... Setting up libgcc1-armhf-cross (1:9.2.1-15cross1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0038+nmu1) ... Setting up autoconf (2.69-11) ... Setting up dh-strip-nondeterminism (1.6.2-1) ... Setting up dwz (0.13-2) ... Setting up groff-base (1.22.4-3) ... Setting up cpp-arm-linux-gnueabihf (4:9.2.1-3.1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-9) ... Setting up man-db (2.9.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libasan5-armhf-cross (9.2.1-15cross1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libstdc++6-armhf-cross (9.2.1-15cross1) ... Setting up libubsan1-armhf-cross (9.2.1-15cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-9-dev-armhf-cross (9.2.1-15cross1) ... Setting up po-debconf (1.0.21) ... Setting up libxml-simple-perl (2.25-1) ... Setting up gcc-9-arm-linux-gnueabihf (9.2.1-15cross1) ... Setting up libstdc++-9-dev-armhf-cross (9.2.1-15cross1) ... Setting up gcc-arm-linux-gnueabihf (4:9.2.1-3.1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up g++-9-arm-linux-gnueabihf (9.2.1-15cross1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up g++-arm-linux-gnueabihf (4:9.2.1-3.1) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-armhf (12.8) ... Setting up libgcc1:armhf (1:9.2.1-17) ... Setting up dh-autoreconf (19) ... Setting up libc6:armhf (2.29-3) ... Setting up libc6-dev:armhf (2.29-3) ... Setting up libstdc++6:armhf (9.2.1-17) ... Setting up debhelper (12.7.1) ... Setting up libgomp1:armhf (9.2.1-17) ... Setting up libasan5:armhf (9.2.1-17) ... Setting up libatomic1:armhf (9.2.1-17) ... Setting up libubsan1:armhf (9.2.1-17) ... Setting up libgcc-9-dev:armhf (9.2.1-17) ... Setting up libstdc++-9-dev:armhf (9.2.1-17) ... Setting up sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.29-3) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 #1 SMP Debian 4.9.144-3.1 (2019-02-19) amd64 (x86_64) Toolchain package versions: binutils_2.33.1-2 dpkg-dev_1.19.7 g++-8_8.3.0-23 g++-9_9.2.1-17 gcc-8_8.3.0-23 gcc-9_9.2.1-17 libc6-dev_2.29-3 libstdc++-8-dev_8.3.0-23 libstdc++-9-dev_9.2.1-17 libstdc++-9-dev-armhf-cross_9.2.1-15cross1 libstdc++6_9.2.1-17 libstdc++6-armhf-cross_9.2.1-15cross1 linux-libc-dev_5.3.7-1 Package versions: adduser_3.118 apt_1.8.4 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.46 bash_5.0-4 binutils_2.33.1-2 binutils-arm-linux-gnueabihf_2.33.1-2 binutils-common_2.33.1-2 binutils-x86-64-linux-gnu_2.33.1-2 bsdmainutils_11.1.2+b1 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 coreutils_8.30-3+b1 cpp_4:9.2.1-3.1 cpp-8_8.3.0-23 cpp-9_9.2.1-17 cpp-9-arm-linux-gnueabihf_9.2.1-15cross1 cpp-arm-linux-gnueabihf_4:9.2.1-3.1 cross-config_2.6.15-3 crossbuild-essential-armhf_12.8 d-shlibs_0.88 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.7.1 debian-archive-keyring_2019.1 debianutils_4.9 dh-autoreconf_19 dh-strip-nondeterminism_1.6.2-1 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.13-2 e2fsprogs_1.45.4-1 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.37-6 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-8_8.3.0-23 g++-9_9.2.1-17 g++-9-arm-linux-gnueabihf_9.2.1-15cross1 g++-arm-linux-gnueabihf_4:9.2.1-3.1 gcc_4:9.2.1-3.1 gcc-8_8.3.0-23 gcc-8-base_8.3.0-23 gcc-9_9.2.1-17 gcc-9-arm-linux-gnueabihf_9.2.1-15cross1 gcc-9-arm-linux-gnueabihf-base_9.2.1-15cross1 gcc-9-base_9.2.1-17 gcc-9-cross-base_9.2.1-15cross1 gcc-arm-linux-gnueabihf_4:9.2.1-3.1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.17-3 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3+b1 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-5 libapt-pkg5.0_1.8.4 libarchive-zip-perl_1.67-1 libasan5_9.2.1-17 libasan5-armhf-cross_9.2.1-15cross1 libatomic1_9.2.1-17 libatomic1-armhf-cross_9.2.1-15cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2 libbinutils_2.33.1-2 libblkid1_2.34-0.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.29-3 libc-dev-bin_2.29-3 libc6_2.29-3 libc6-armhf-cross_2.29-1cross7 libc6-dev_2.29-3 libc6-dev-armhf-cross_2.29-1cross7 libcap-ng0_0.7.9-2.1 libcc1-0_9.2.1-17 libcom-err2_1.45.4-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.13-1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.250 libdebhelper-perl_12.7.1 libdebian-dpkgcross-perl_2.6.15-3 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libext2fs2_1.45.4-1 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.6.2-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-23 libgcc-9-dev_9.2.1-17 libgcc-9-dev-armhf-cross_9.2.1-15cross1 libgcc1_1:9.2.1-17 libgcc1-armhf-cross_1:9.2.1-15cross1 libgcrypt20_1.8.5-3 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.62.2-3 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.10-4 libgomp1_9.2.1-17 libgomp1-armhf-cross_9.2.1-15cross1 libgpg-error0_1.36-7 libhogweed4_3.5.1+really3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libicu63_63.2-2 libidn2-0_2.2.0-2 libio-string-perl_1.08-3 libisl19_0.20-2 libisl21_0.21-2 libitm1_9.2.1-17 liblocale-gettext-perl_1.07-4 liblsan0_9.2.1-17 liblz4-1_1.9.2-1 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.37-6 libmagic1_1:5.37-6 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-23 libncurses6_6.1+20191019-1 libncursesw6_6.1+20191019-1 libnettle6_3.5.1+really3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libp11-kit0_0.23.18.1-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.32-5+b1 libpcre3_2:8.39-12+b1 libperl5.28_5.28.1-6 libperl5.30_5.30.0-9 libpipeline1_1.5.1-2 libquadmath0_9.2.1-17 libseccomp2_2.4.1-2 libselinux1_2.9-2+b2 libsemanage-common_2.9-3 libsemanage1_2.9-3 libsepol1_2.9-2+b2 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libss2_1.45.4-1 libstdc++-8-dev_8.3.0-23 libstdc++-9-dev_9.2.1-17 libstdc++-9-dev-armhf-cross_9.2.1-15cross1 libstdc++6_9.2.1-17 libstdc++6-armhf-cross_9.2.1-15cross1 libsub-override-perl_0.09-2 libsystemd0_242-7 libtasn1-6_4.14-3 libtinfo6_6.1+20191019-1 libtool_2.4.6-11 libtsan0_9.2.1-17 libubsan1_9.2.1-17 libubsan1-armhf-cross_9.2.1-15cross1 libuchardet0_0.0.6-3 libudev1_242-7 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libxml-libxml-perl_2.0134+dfsg-1+b1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-perl_1.29-1 libzstd1_1.4.3+dfsg-1 linux-libc-dev_5.3.7-1 linux-libc-dev-armhf-cross_5.2.9-2cross7 login_1:4.7-2 logsave_1.45.4-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-1 mawk_1.3.3-17+b3 mount_2.34-0.1 ncurses-base_6.1+20191019-1 ncurses-bin_6.1+20191019-1 passwd_1:4.7-2 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.0-9 po-debconf_1.0.21 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.96-1 tar_1.30+dfsg-6+b1 tzdata_2019c-3 ucf_3.0038+nmu1 util-linux_2.34-0.1 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-1+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libgclib Binary: libgclib-dev, libgclib0 Architecture: any Version: 0.11.3-1 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Andreas Tille , Michael R. Crusoe Homepage: https://github.com/gpertea/gclib Standards-Version: 4.4.0 Vcs-Browser: https://salsa.debian.org/med-team/libgclib Vcs-Git: https://salsa.debian.org/med-team/libgclib.git Testsuite: autopkgtest Testsuite-Triggers: build-essential Build-Depends: debhelper-compat (= 12), d-shlibs Package-List: libgclib-dev deb libdevel optional arch=any libgclib0 deb libs optional arch=any Checksums-Sha1: 40f452f55a9cde4b5449fbec9fdeee8105f92e0b 189031 libgclib_0.11.3.orig.tar.gz ee216762aff26f7241ea7402e74350ae68252489 13188 libgclib_0.11.3-1.debian.tar.xz Checksums-Sha256: ba9f86d34829b2173212fa62f5a25cebae1299f98affcd43161ef550526d32be 189031 libgclib_0.11.3.orig.tar.gz 1184096d3e66b26dd0002f694ee8765d9bb65a133c5ce45fafcf9f7011c0d1f6 13188 libgclib_0.11.3-1.debian.tar.xz Files: 326100cb7f769657871a003f778a8a5b 189031 libgclib_0.11.3.orig.tar.gz ca72c99a17fc7d5b8b8aa5a88bc12b92 13188 libgclib_0.11.3-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAl3ED7YACgkQPCZ2P2xn 5uKy7xAAjZHS3jWI+IJehHqNtGavsQAQim8Um3BLbiiUAPm8+Jsn0cT3NURwEegu tYwAYdKH2UJ3GnhfAxgmNUZ9QX3PWesOALynrogLhnX05KdDgcrKWDSN6cXwSGr1 m9jqO40Wg6BKyTOF4DMa5SIUCyGe6F2jfOJ1IVygJjgB0KtF4fN790AvCMNT7BZE nbAsTlupo8vu3bmJ08y7bcBXkXGXgkD2tJZHTi8xjTGAohFkM+5BJKX4MLBYLRfJ uMXN/TGAhq/o+cmygsdGeCuPU84rxBgKvB3xja7jVHM1zm4qIKbv6ynCcFW58gkB 73npCRhNlZ0qQ1jAxOrbMJ3P4RXif0haPoieZmMnsElwu7RQWpQ1jukhWv5lQ2gK SkLcL3pVNRUPjF2ikAwXNTRZ50mhy1CPCbmIudg0fuptQwcCWCsb681XH/8iNVUq Ys8gykjhbnuE2jUVcRxukWyrlToDyhMkJirzRgFz+Btj88dRJjDhEslUjXzTKeUT Efp2EO2JCuNNPy3ltj2IKH/VwxAstJGwGdby8wIzrHpF0JSMN+I6MRCxMjjW2yik UuL053wiqNDk3vWtawaeqJkl2Tmp/QYRaKYlhq0keTtJDwIfHmiB6LU8g/gbqjj5 CzLRHL71Q4OpEv8Kzg8nsm4yD+qHRC8fknqORQ6sweBkpIIp1Ww= =/C3/ -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Thu Nov 7 12:36:06 2019 UTC gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libgclib_0.11.3-1.dsc dpkg-source: info: extracting libgclib in /<> dpkg-source: info: unpacking libgclib_0.11.3.orig.tar.gz dpkg-source: info: unpacking libgclib_0.11.3-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying autoconf.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-522eac3a-e18a-40bf-8356-483d7919ded9 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarmhf -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package libgclib dpkg-buildpackage: info: source version 0.11.3-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a aclocal: warning: couldn't open directory 'config': No such file or directory libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'config'. libtoolize: copying file 'config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'config'. libtoolize: copying file 'config/libtool.m4' libtoolize: copying file 'config/ltoptions.m4' libtoolize: copying file 'config/ltsugar.m4' libtoolize: copying file 'config/ltversion.m4' libtoolize: copying file 'config/lt~obsolete.m4' libtoolize: Consider adding '-I config' to ACLOCAL_AMFLAGS in Makefile.am. configure.ac:30: installing 'config/compile' configure.ac:30: installing 'config/config.guess' configure.ac:30: installing 'config/config.sub' configure.ac:18: installing 'config/install-sh' configure.ac:18: installing 'config/missing' Makefile.am: installing 'config/depcomp' dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=arm-linux-gnueabihf configure: WARNING: unrecognized options: --disable-maintainer-mode configure: loading site script /etc/dpkg-cross/cross-config.armhf checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for arm-linux-gnueabihf-strip... arm-linux-gnueabihf-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether UID '1003' is supported by ustar format... yes checking whether GID '1003' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking whether ln -s works... yes checking build system type... x86_64-pc-linux-gnu checking host system type... arm-unknown-linux-gnueabihf checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for arm-linux-gnueabihf-gcc... arm-linux-gnueabihf-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether arm-linux-gnueabihf-gcc accepts -g... yes checking for arm-linux-gnueabihf-gcc option to accept ISO C89... none needed checking whether arm-linux-gnueabihf-gcc understands -c and -o together... yes checking dependency style of arm-linux-gnueabihf-gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by arm-linux-gnueabihf-gcc... /usr/arm-linux-gnueabihf/bin/ld checking if the linker (/usr/arm-linux-gnueabihf/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/arm-linux-gnueabihf-nm -B checking the name lister (/usr/bin/arm-linux-gnueabihf-nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/arm-linux-gnueabihf/bin/ld option to reload object files... -r checking for arm-linux-gnueabihf-objdump... arm-linux-gnueabihf-objdump checking how to recognize dependent libraries... pass_all checking for arm-linux-gnueabihf-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for arm-linux-gnueabihf-ar... arm-linux-gnueabihf-ar checking for archiver @FILE support... @ checking for arm-linux-gnueabihf-strip... (cached) arm-linux-gnueabihf-strip checking for arm-linux-gnueabihf-ranlib... arm-linux-gnueabihf-ranlib checking command to parse /usr/bin/arm-linux-gnueabihf-nm -B output from arm-linux-gnueabihf-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for arm-linux-gnueabihf-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... arm-linux-gnueabihf-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if arm-linux-gnueabihf-gcc supports -fno-rtti -fno-exceptions... no checking for arm-linux-gnueabihf-gcc option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabihf-gcc PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabihf-gcc static flag -static works... yes checking if arm-linux-gnueabihf-gcc supports -c -o file.o... yes checking if arm-linux-gnueabihf-gcc supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabihf-gcc linker (/usr/arm-linux-gnueabihf/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for arm-linux-gnueabihf-g++... arm-linux-gnueabihf-g++ checking whether we are using the GNU C++ compiler... yes checking whether arm-linux-gnueabihf-g++ accepts -g... yes checking dependency style of arm-linux-gnueabihf-g++... none checking how to run the C++ preprocessor... arm-linux-gnueabihf-g++ -E checking for ld used by arm-linux-gnueabihf-g++... /usr/arm-linux-gnueabihf/bin/ld checking if the linker (/usr/arm-linux-gnueabihf/bin/ld) is GNU ld... yes checking whether the arm-linux-gnueabihf-g++ linker (/usr/arm-linux-gnueabihf/bin/ld) supports shared libraries... yes checking for arm-linux-gnueabihf-g++ option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabihf-g++ PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabihf-g++ static flag -static works... yes checking if arm-linux-gnueabihf-g++ supports -c -o file.o... yes checking if arm-linux-gnueabihf-g++ supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabihf-g++ linker (/usr/arm-linux-gnueabihf/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate ./configure: line 11542: AX_CXXFLAGS: command not found checking for ANSI C header files... (cached) yes checking for stdlib.h... (cached) yes checking whether make sets $(MAKE)... (cached) yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating libgclib.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-am make[2]: Entering directory '/<>' arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c -o mdtest.o mdtest.cpp /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c -o libgclib_la-codons.lo `test -f 'codons.cpp' || echo './'`codons.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c codons.cpp -fPIC -DPIC -o .libs/libgclib_la-codons.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c codons.cpp -o libgclib_la-codons.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c -o libgclib_la-GAlnExtend.lo `test -f 'GAlnExtend.cpp' || echo './'`GAlnExtend.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c GAlnExtend.cpp -fPIC -DPIC -o .libs/libgclib_la-GAlnExtend.o GAlnExtend.cpp:21:2: warning: extra ‘;’ [-Wpedantic] 21 | }; | ^ GAlnExtend.cpp:27:2: warning: extra ‘;’ [-Wpedantic] 27 | }; | ^ GAlnExtend.cpp:39:2: warning: extra ‘;’ [-Wpedantic] 39 | }; | ^ GAlnExtend.cpp:45:2: warning: extra ‘;’ [-Wpedantic] 45 | }; | ^ libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c GAlnExtend.cpp -o libgclib_la-GAlnExtend.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c -o libgclib_la-GapAssem.lo `test -f 'GapAssem.cpp' || echo './'`GapAssem.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c GapAssem.cpp -fPIC -DPIC -o .libs/libgclib_la-GapAssem.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c GapAssem.cpp -o libgclib_la-GapAssem.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c -o libgclib_la-GArgs.lo `test -f 'GArgs.cpp' || echo './'`GArgs.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time 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GBase.cpp -fPIC -DPIC -o .libs/libgclib_la-GBase.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c GBase.cpp -o libgclib_la-GBase.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c -o libgclib_la-gcdb.lo `test -f 'gcdb.cpp' || echo './'`gcdb.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c gcdb.cpp -fPIC -DPIC -o .libs/libgclib_la-gcdb.o gcdb.cpp: In constructor ‘GCdbRead::GCdbRead(int)’: gcdb.cpp:806:20: warning: comparison of integer expressions of different signedness: ‘__off_t’ {aka ‘long int’} and ‘unsigned int’ [-Wsign-compare] 806 | if (st.st_size <= MAX_UINT) { gcdb.cpp: In constructor ‘GCdbRead::GCdbRead(char*)’: gcdb.cpp:840:20: warning: comparison of integer expressions of different signedness: ‘__off_t’ {aka ‘long int’} and ‘unsigned int’ [-Wsign-compare] 840 | if (st.st_size <= MAX_UINT) { libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c gcdb.cpp -o libgclib_la-gcdb.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c -o libgclib_la-GCdbYank.lo `test -f 'GCdbYank.cpp' || echo './'`GCdbYank.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c GCdbYank.cpp -fPIC -DPIC -o .libs/libgclib_la-GCdbYank.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c GCdbYank.cpp -o libgclib_la-GCdbYank.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c -o libgclib_la-gdna.lo `test -f 'gdna.cpp' || echo './'`gdna.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c gdna.cpp -fPIC -DPIC -o .libs/libgclib_la-gdna.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c gdna.cpp -o libgclib_la-gdna.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c -o libgclib_la-GFaSeqGet.lo `test -f 'GFaSeqGet.cpp' || echo './'`GFaSeqGet.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c GFaSeqGet.cpp -fPIC -DPIC -o .libs/libgclib_la-GFaSeqGet.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c GFaSeqGet.cpp -o libgclib_la-GFaSeqGet.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c -o libgclib_la-GFastaIndex.lo `test -f 'GFastaIndex.cpp' || echo './'`GFastaIndex.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c GFastaIndex.cpp -fPIC -DPIC -o .libs/libgclib_la-GFastaIndex.o GFastaIndex.cpp: In member function ‘int GFastaIndex::loadIndex(const char*)’: GFastaIndex.cpp:55:22: warning: format ‘%d’ expects argument of type ‘int*’, but argument 3 has type ‘uint*’ {aka ‘unsigned int*’} [-Wformat=] 55 | sscanf(p, "%d%lld%d%d", &len, &offset, &line_len, &line_blen); | ~^ ~~~~ | | | | int* uint* {aka unsigned int*} | %d libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c GFastaIndex.cpp -o libgclib_la-GFastaIndex.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c -o libgclib_la-gff.lo `test -f 'gff.cpp' || echo './'`gff.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c gff.cpp -fPIC -DPIC -o .libs/libgclib_la-gff.o In file included from gff.cpp:1: gff.h:228:6: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 228 | }; | ^ gff.h:239:6: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 239 | }; | ^ gff.h:328:5: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 328 | }; | ^ gff.h:708:7: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 708 | }; | ^ gff.h:1166:5: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 1166 | }; | ^ In file included from GList.hh:8, from GFastaIndex.h:12, from GFaSeqGet.h:3, from gff.h:9, from gff.cpp:1: GVec.hh: In instantiation of ‘void GVec::Grow(int, OBJ&) [with OBJ = GffObj::processGeneSegments(GffReader*)::GSegMatch]’: GVec.hh:430:5: required from ‘void GVec::Insert(int, OBJ*) [with OBJ = GffObj::processGeneSegments(GffReader*)::GSegMatch]’ GVec.hh:69:38: required from ‘void GVec::Insert(int, OBJ) [with OBJ = GffObj::processGeneSegments(GffReader*)::GSegMatch]’ GList.hh:231:21: required from ‘int GArray::Add(OBJ*) [with OBJ = GffObj::processGeneSegments(GffReader*)::GSegMatch]’ GList.hh:51:42: required from ‘int GArray::Add(OBJ&) [with OBJ = GffObj::processGeneSegments(GffReader*)::GSegMatch]’ gff.cpp:2005:23: required from here GVec.hh:358:15: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class GffObj::processGeneSegments(GffReader*)::GSegMatch’; use assignment or value-initialization instead [-Wclass-memaccess] 358 | memset(&newList[fCount+1], 0, (NewCapacity-fCount-1)*sizeof(OBJ)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gff.cpp:1971:8: note: ‘class GffObj::processGeneSegments(GffReader*)::GSegMatch’ declared here 1971 | class GSegMatch { //keep track of "matching" overlaps of a GeneCDSChain with multiple GeneSegment containers | ^~~~~~~~~ libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time 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arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c -o libgclib_la-GStr.lo `test -f 'GStr.cpp' || echo './'`GStr.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c GStr.cpp -fPIC -DPIC -o .libs/libgclib_la-GStr.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c GStr.cpp -o libgclib_la-GStr.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c -o libgclib_la-GThreads.lo `test -f 'GThreads.cpp' || echo './'`GThreads.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c GThreads.cpp -fPIC -DPIC -o .libs/libgclib_la-GThreads.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -c GThreads.cpp -o libgclib_la-GThreads.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=link arm-linux-gnueabihf-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -version-info 0:1 -lpthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,-flto -o libgclib.la -rpath /usr/lib/arm-linux-gnueabihf libgclib_la-codons.lo libgclib_la-GAlnExtend.lo libgclib_la-GapAssem.lo libgclib_la-GArgs.lo libgclib_la-GBase.lo libgclib_la-gcdb.lo libgclib_la-GCdbYank.lo libgclib_la-gdna.lo libgclib_la-GFaSeqGet.lo libgclib_la-GFastaIndex.lo libgclib_la-gff.lo libgclib_la-gsocket.lo libgclib_la-gstopwatch.lo libgclib_la-GStr.lo libgclib_la-GThreads.lo libtool: link: arm-linux-gnueabihf-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc-cross/arm-linux-gnueabihf/9/../../../../arm-linux-gnueabihf/lib/crti.o /usr/lib/gcc-cross/arm-linux-gnueabihf/9/crtbeginS.o .libs/libgclib_la-codons.o .libs/libgclib_la-GAlnExtend.o .libs/libgclib_la-GapAssem.o .libs/libgclib_la-GArgs.o .libs/libgclib_la-GBase.o .libs/libgclib_la-gcdb.o .libs/libgclib_la-GCdbYank.o .libs/libgclib_la-gdna.o .libs/libgclib_la-GFaSeqGet.o .libs/libgclib_la-GFastaIndex.o .libs/libgclib_la-gff.o .libs/libgclib_la-gsocket.o .libs/libgclib_la-gstopwatch.o .libs/libgclib_la-GStr.o .libs/libgclib_la-GThreads.o -lpthread -L/usr/lib/gcc-cross/arm-linux-gnueabihf/9 -L/usr/lib/gcc-cross/arm-linux-gnueabihf/9/../../../../arm-linux-gnueabihf/lib -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc-cross/arm-linux-gnueabihf/9/crtendS.o /usr/lib/gcc-cross/arm-linux-gnueabihf/9/../../../../arm-linux-gnueabihf/lib/crtn.o -g -O2 -fstack-protector-strong -flto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,--as-needed -Wl,-flto -Wl,-soname -Wl,libgclib.so.0 -o .libs/libgclib.so.0.0.1 GVec.hh: In member function 'setCapacity': GVec.hh:295:10: warning: argument 1 value '4294967295' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 295 | fArray=new OBJ[NewCapacity]; | ^ GVec.hh:295:10: note: in a call to built-in allocation function 'operator new []' libtool: link: (cd ".libs" && rm -f "libgclib.so.0" && ln -s "libgclib.so.0.0.1" "libgclib.so.0") libtool: link: (cd ".libs" && rm -f "libgclib.so" && ln -s "libgclib.so.0.0.1" "libgclib.so") libtool: link: arm-linux-gnueabihf-ar cru .libs/libgclib.a libgclib_la-codons.o libgclib_la-GAlnExtend.o libgclib_la-GapAssem.o libgclib_la-GArgs.o libgclib_la-GBase.o libgclib_la-gcdb.o libgclib_la-GCdbYank.o libgclib_la-gdna.o libgclib_la-GFaSeqGet.o libgclib_la-GFastaIndex.o libgclib_la-gff.o libgclib_la-gsocket.o libgclib_la-gstopwatch.o libgclib_la-GStr.o libgclib_la-GThreads.o arm-linux-gnueabihf-ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: arm-linux-gnueabihf-ranlib .libs/libgclib.a libtool: link: ( cd ".libs" && rm -f "libgclib.la" && ln -s "../libgclib.la" "libgclib.la" ) /bin/bash ./libtool --tag=CXX --mode=link arm-linux-gnueabihf-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,-flto -o mdtest mdtest.o libgclib.la libtool: link: arm-linux-gnueabihf-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -fPIC -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,--as-needed -Wl,-flto -o .libs/mdtest mdtest.o ./.libs/libgclib.so make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' make[2]: Entering directory '/<>' /bin/mkdir -p '/<>/debian/tmp/usr/lib/arm-linux-gnueabihf' /bin/bash ./libtool --mode=install /usr/bin/install -c libgclib.la '/<>/debian/tmp/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/libgclib.so.0.0.1 /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libgclib.so.0.0.1 libtool: install: (cd /<>/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libgclib.so.0.0.1 libgclib.so.0 || { rm -f libgclib.so.0 && ln -s libgclib.so.0.0.1 libgclib.so.0; }; }) libtool: install: (cd /<>/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libgclib.so.0.0.1 libgclib.so || { rm -f libgclib.so && ln -s libgclib.so.0.0.1 libgclib.so; }; }) libtool: install: /usr/bin/install -c .libs/libgclib.lai /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libgclib.la libtool: install: /usr/bin/install -c .libs/libgclib.a /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libgclib.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libgclib.a libtool: install: arm-linux-gnueabihf-ranlib /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libgclib.a libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/bash ./libtool --mode=install /usr/bin/install -c mdtest '/<>/debian/tmp/usr/bin' libtool: warning: 'libgclib.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/mdtest /<>/debian/tmp/usr/bin/mdtest /bin/mkdir -p '/<>/debian/tmp/usr/include' /usr/bin/install -c -m 644 GAlnExtend.h GArgs.h GBam.h GBase.h GBitVec.h GCdbYank.h GFaSeqGet.h GFastaFile.h GFastaIndex.h GStr.h GThreads.h GapAssem.h codons.h config.h gcdb.h gdimg.h gdna.h gff.h gsocket.h gstopwatch.h proc_mem.h GHash.hh GIntHash.hh GList.hh GVec.hh '/<>/debian/tmp/usr/include' /bin/mkdir -p '/<>/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig' /usr/bin/install -c -m 644 libgclib.pc '/<>/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/tmp/usr/include usr \ --movedev "debian/tmp/usr/lib/*/pkgconfig/*.pc" usr/lib/arm-linux-gnueabihf/pkgconfig \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility set -e install -d -m 755 debian/libgclib-dev/usr/lib/arm-linux-gnueabihf install -d -m 755 debian/libgclib0/usr/lib/arm-linux-gnueabihf mv debian/tmp/usr/lib/arm-linux-gnueabihf/libgclib.a debian/libgclib-dev/usr/lib/arm-linux-gnueabihf mv debian/tmp/usr/lib/arm-linux-gnueabihf/libgclib.so debian/libgclib-dev/usr/lib/arm-linux-gnueabihf mv /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libgclib.so.0 debian/libgclib0/usr/lib/arm-linux-gnueabihf mv /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libgclib.so.0.0.1 debian/libgclib0/usr/lib/arm-linux-gnueabihf PKGDEV=libgclib-dev PKGSHL=libgclib0 install -d -m 755 debian/libgclib-dev/usr mv debian/tmp/usr/include debian/libgclib-dev/usr install -d -m 755 debian/libgclib-dev/usr/lib/arm-linux-gnueabihf/pkgconfig mv debian/tmp/usr/lib/*/pkgconfig/*.pc debian/libgclib-dev/usr/lib/arm-linux-gnueabihf/pkgconfig mkdir debian/libgclib-dev/usr/include/gclib mv debian/libgclib-dev/usr/include/*.h* debian/libgclib-dev/usr/include/gclib # delete header files of not compiled C++ source files find debian/libgclib-dev -name gdimg.h -delete find debian/libgclib-dev -name GBam.h -delete make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a debian/rules override_dh_installexamples make[1]: Entering directory '/<>' dh_installexamples chmod a-x debian/libgclib-dev/usr/share/doc/libgclib-dev/examples/* make[1]: Leaving directory '/<>' dh_perl -a dh_perl: /usr/lib/arm-linux-gnueabihf/perl/cross-config-5.30.0/Config.pm does not exist (missing build dependency on perl-xs-dev?) dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_missing: usr/bin/mdtest exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/arm-linux-gnueabihf/libgclib.la exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: libgclib-dev (0), libgclib0 (0) * dh_installdocs: libgclib-dev (0), libgclib0 (0) * dh_installexamples: libgclib-dev (1), libgclib0 (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built For a short-term work-around: Add the files to debian/not-installed dh_dwz -a dh_strip -a arm-linux-gnueabihf-strip: debian/libgclib-dev/usr/lib/arm-linux-gnueabihf/stjOIwoU/libgclib_la-codons.o: plugin needed to handle lto object dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libgclib0/usr/lib/arm-linux-gnueabihf/libgclib.so.0.0.1 found in none of the libraries dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'libgclib-dev' in '../libgclib-dev_0.11.3-1_armhf.deb'. dpkg-deb: building package 'libgclib0' in '../libgclib0_0.11.3-1_armhf.deb'. dpkg-deb: building package 'libgclib0-dbgsym' in '../libgclib0-dbgsym_0.11.3-1_armhf.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../libgclib_0.11.3-1_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-11-08T00:32:40Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libgclib_0.11.3-1_armhf.changes: -------------------------------- Format: 1.8 Date: Thu, 07 Nov 2019 13:35:50 +0100 Source: libgclib Binary: libgclib-dev libgclib0 libgclib0-dbgsym Built-For-Profiles: cross nocheck Architecture: armhf Version: 0.11.3-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: libgclib-dev - header files for Genome Code Lib (GCLib) libgclib0 - C++ library to handle biological short sequence data Changes: libgclib (0.11.3-1) unstable; urgency=medium . * New upstream version * Set upstream metadata fields: Repository. * Remove obsolete fields Name from debian/upstream/metadata. * Add new symbols Checksums-Sha1: 9e3232ed6db5b24bbd7b271a5b663a039f0eba5b 2320888 libgclib-dev_0.11.3-1_armhf.deb 6384fbe816bc7e079cb661d46c34d3d638a87885 478120 libgclib0-dbgsym_0.11.3-1_armhf.deb d54a60fb1aeea6352763024af7d9b5ad74c182cc 119888 libgclib0_0.11.3-1_armhf.deb 1b32aca31731e2956c8fdffa34dfb78ae89a08b8 5375 libgclib_0.11.3-1_armhf.buildinfo Checksums-Sha256: 3b693cde3e4aa2e137d187549b83779f912b8519014df1b841fb9cc075e1a4fe 2320888 libgclib-dev_0.11.3-1_armhf.deb fa0696a99c4d66135f2762b186ac4c9d6261ac62defc3cbee07297713dc30fec 478120 libgclib0-dbgsym_0.11.3-1_armhf.deb b1f7d723c359960db31046a62f3474df96080c81761927d7096708caa740a026 119888 libgclib0_0.11.3-1_armhf.deb 08641877a40792d749d8e8b8de567d0764f9b9318590d5371a1a65ea02c98791 5375 libgclib_0.11.3-1_armhf.buildinfo Files: 7d25f89115cf68fbc1b0cc6e729e3a04 2320888 libdevel optional libgclib-dev_0.11.3-1_armhf.deb 960239c2d4233b8ed988ab44909b4e69 478120 debug optional libgclib0-dbgsym_0.11.3-1_armhf.deb 00d40bf708591afa884df45d894221c7 119888 libs optional libgclib0_0.11.3-1_armhf.deb df55353cdd4ead15385a0de0ea923a14 5375 science optional libgclib_0.11.3-1_armhf.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: libgclib Binary: libgclib-dev libgclib0 Architecture: armhf Version: 0.11.3-1 Checksums-Md5: 7d25f89115cf68fbc1b0cc6e729e3a04 2320888 libgclib-dev_0.11.3-1_armhf.deb 960239c2d4233b8ed988ab44909b4e69 478120 libgclib0-dbgsym_0.11.3-1_armhf.deb 00d40bf708591afa884df45d894221c7 119888 libgclib0_0.11.3-1_armhf.deb Checksums-Sha1: 9e3232ed6db5b24bbd7b271a5b663a039f0eba5b 2320888 libgclib-dev_0.11.3-1_armhf.deb 6384fbe816bc7e079cb661d46c34d3d638a87885 478120 libgclib0-dbgsym_0.11.3-1_armhf.deb d54a60fb1aeea6352763024af7d9b5ad74c182cc 119888 libgclib0_0.11.3-1_armhf.deb Checksums-Sha256: 3b693cde3e4aa2e137d187549b83779f912b8519014df1b841fb9cc075e1a4fe 2320888 libgclib-dev_0.11.3-1_armhf.deb fa0696a99c4d66135f2762b186ac4c9d6261ac62defc3cbee07297713dc30fec 478120 libgclib0-dbgsym_0.11.3-1_armhf.deb b1f7d723c359960db31046a62f3474df96080c81761927d7096708caa740a026 119888 libgclib0_0.11.3-1_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Fri, 08 Nov 2019 00:32:40 +0000 Build-Path: /<> Installed-Build-Depends: adduser (= 3.118), apt (= 1.8.4), autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.46), bash (= 5.0-4), binutils (= 2.33.1-2), binutils-common (= 2.33.1-2), binutils-x86-64-linux-gnu (= 2.33.1-2), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.34-0.1), build-essential (= 12.8), bzip2 (= 1.0.8-2), coreutils (= 8.30-3+b1), cpp (= 4:9.2.1-3.1), cpp-8 (= 8.3.0-23), cpp-9 (= 9.2.1-17), d-shlibs (= 0.88), dash (= 0.5.10.2-6), debconf (= 1.5.73), debhelper (= 12.7.1), debian-archive-keyring (= 2019.1), debianutils (= 4.9), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.6.2-1), diffutils (= 1:3.7-3), dpkg (= 1.19.7), dpkg-dev (= 1.19.7), dwz (= 0.13-2), fdisk (= 2.34-0.1), file (= 1:5.37-6), findutils (= 4.7.0-1), g++ (= 4:9.2.1-3.1), g++-9 (= 9.2.1-17), gcc (= 4:9.2.1-3.1), gcc-8 (= 8.3.0-23), gcc-8-base (= 8.3.0-23), gcc-9 (= 9.2.1-17), gcc-9-base (= 9.2.1-17), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), gpgv (= 2.2.17-3), grep (= 3.3-1), groff-base (= 1.22.4-3), gzip (= 1.9-3+b1), hostname (= 3.23), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-5), libapt-pkg5.0 (= 1.8.4), libarchive-zip-perl (= 1.67-1), libasan5 (= 9.2.1-17), libatomic1 (= 9.2.1-17), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-2), libaudit1 (= 1:2.8.5-2), libbinutils (= 2.33.1-2), libblkid1 (= 2.34-0.1), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.8-2), libc-bin (= 2.29-3), libc-dev-bin (= 2.29-3), libc6 (= 2.29-3), libc6-dev (= 2.29-3), libcap-ng0 (= 0.7.9-2.1), libcc1-0 (= 9.2.1-17), libcroco3 (= 0.6.13-1), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.250), libdebhelper-perl (= 12.7.1), libdpkg-perl (= 1.19.7), libelf1 (= 0.176-1.1), libfdisk1 (= 2.34-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.6.2-1), libgcc-8-dev (= 8.3.0-23), libgcc-9-dev (= 9.2.1-17), libgcc1 (= 1:9.2.1-17), libgcrypt20 (= 1.8.5-3), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libglib2.0-0 (= 2.62.2-3), libgmp10 (= 2:6.1.2+dfsg-4), libgnutls30 (= 3.6.10-4), libgomp1 (= 9.2.1-17), libgpg-error0 (= 1.36-7), libhogweed5 (= 3.5.1+really3.5.1-2), libicu63 (= 63.2-2), libidn2-0 (= 2.2.0-2), libisl21 (= 0.21-2), libitm1 (= 9.2.1-17), liblsan0 (= 9.2.1-17), liblz4-1 (= 1.9.2-1), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.37-6), libmagic1 (= 1:5.37-6), libmount1 (= 2.34-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-23), libncurses6 (= 6.1+20191019-1), libncursesw6 (= 6.1+20191019-1), libnettle7 (= 3.5.1+really3.5.1-2), libp11-kit0 (= 0.23.18.1-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.32-5+b1), libpcre3 (= 2:8.39-12+b1), libperl5.30 (= 5.30.0-9), libpipeline1 (= 1.5.1-2), libquadmath0 (= 9.2.1-17), libseccomp2 (= 2.4.1-2), libselinux1 (= 2.9-2+b2), libsemanage-common (= 2.9-3), libsemanage1 (= 2.9-3), libsepol1 (= 2.9-2+b2), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.34-0.1), libstdc++-9-dev (= 9.2.1-17), libstdc++6 (= 9.2.1-17), libsub-override-perl (= 0.09-2), libsystemd0 (= 242-7), libtasn1-6 (= 4.14-3), libtinfo6 (= 6.1+20191019-1), libtool (= 2.4.6-11), libtsan0 (= 9.2.1-17), libubsan1 (= 9.2.1-17), libuchardet0 (= 0.0.6-3), libudev1 (= 242-7), libunistring2 (= 0.9.10-2), libuuid1 (= 2.34-0.1), libxml2 (= 2.9.4+dfsg1-7+b3), libzstd1 (= 1.4.3+dfsg-1), linux-libc-dev (= 5.3.7-1), login (= 1:4.7-2), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.2.1-1.2), man-db (= 2.9.0-1), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20191019-1), ncurses-bin (= 6.1+20191019-1), passwd (= 1:4.7-2), patch (= 2.7.6-6), perl (= 5.30.0-9), perl-base (= 5.30.0-9), perl-modules-5.30 (= 5.30.0-9), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.96-1), tar (= 1.30+dfsg-6+b1), util-linux (= 2.34-0.1), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-1+b1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1573130150" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libgclib-dev_0.11.3-1_armhf.deb ------------------------------- new Debian package, version 2.0. size 2320888 bytes: control archive=1816 bytes. 1223 bytes, 27 lines control 1814 bytes, 28 lines md5sums Package: libgclib-dev Source: libgclib Version: 0.11.3-1 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 3245 Depends: libgclib0 (= 0.11.3-1) Section: libdevel Priority: optional Multi-Arch: same Homepage: https://github.com/gpertea/gclib Description: header files for Genome Code Lib (GCLib) This is an eclectic gathering of (mostly) C++ code which upstream used for some bioinformatics projects. The main idea is to provide lean code and efficient data structures, trying to avoid too many code dependencies of heavy libraries while minimizing production cycles (and this also implies a decent compile/build time -- looking at you, bloated configure scripts and lengthy compile times of Boost code or other heavy C++ template code..). . This code was gathered even before the C++ STL had been fully adopted as a cross-platform "standard". Since STL by itself is a bit heavier for most of the C++ needs, it is preferred to use simpler&leaner C++ classes or templates for basic strings, containers, basic algorithms etc. . Header files of Genome Code Lib. It is mainly known for being used by StringTie but with its own release cycle. drwxr-xr-x root/root 0 2019-11-07 12:35 ./ drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/ drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/include/ drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/include/gclib/ -rw-r--r-- root/root 25377 2019-11-07 12:35 ./usr/include/gclib/GAlnExtend.h -rw-r--r-- root/root 4020 2019-11-07 12:35 ./usr/include/gclib/GArgs.h -rw-r--r-- root/root 20605 2019-11-07 12:35 ./usr/include/gclib/GBase.h -rw-r--r-- root/root 13278 2019-11-07 12:35 ./usr/include/gclib/GBitVec.h -rw-r--r-- root/root 1952 2019-11-07 12:35 ./usr/include/gclib/GCdbYank.h -rw-r--r-- root/root 10695 2019-11-07 12:35 ./usr/include/gclib/GFaSeqGet.h -rw-r--r-- root/root 24292 2019-11-07 12:35 ./usr/include/gclib/GFastaFile.h -rw-r--r-- root/root 2011 2019-11-07 12:35 ./usr/include/gclib/GFastaIndex.h -rw-r--r-- root/root 20570 2019-11-07 12:35 ./usr/include/gclib/GHash.hh -rw-r--r-- root/root 12273 2019-11-07 12:35 ./usr/include/gclib/GIntHash.hh -rw-r--r-- root/root 20950 2019-11-07 12:35 ./usr/include/gclib/GList.hh -rw-r--r-- root/root 9706 2019-11-07 12:35 ./usr/include/gclib/GStr.h -rw-r--r-- root/root 24741 2019-11-07 12:35 ./usr/include/gclib/GThreads.h -rw-r--r-- root/root 26200 2019-11-07 12:35 ./usr/include/gclib/GVec.hh -rw-r--r-- root/root 15220 2019-11-07 12:35 ./usr/include/gclib/GapAssem.h -rw-r--r-- root/root 1149 2019-11-07 12:35 ./usr/include/gclib/codons.h -rw-r--r-- root/root 1789 2019-11-07 12:35 ./usr/include/gclib/config.h -rw-r--r-- root/root 13837 2019-11-07 12:35 ./usr/include/gclib/gcdb.h -rw-r--r-- root/root 435 2019-11-07 12:35 ./usr/include/gclib/gdna.h -rw-r--r-- root/root 46148 2019-11-07 12:35 ./usr/include/gclib/gff.h -rw-r--r-- root/root 9392 2019-11-07 12:35 ./usr/include/gclib/gsocket.h -rw-r--r-- root/root 632 2019-11-07 12:35 ./usr/include/gclib/gstopwatch.h -rw-r--r-- root/root 241 2019-11-07 12:35 ./usr/include/gclib/proc_mem.h drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/lib/ drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/lib/arm-linux-gnueabihf/ -rw-r--r-- root/root 2977366 2019-11-07 12:35 ./usr/lib/arm-linux-gnueabihf/libgclib.a lrwxrwxrwx root/root 0 2019-11-07 12:35 ./usr/lib/arm-linux-gnueabihf/libgclib.so -> libgclib.so.0.0.1 drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/lib/arm-linux-gnueabihf/pkgconfig/ -rw-r--r-- root/root 247 2019-11-07 12:35 ./usr/lib/arm-linux-gnueabihf/pkgconfig/libgclib.pc drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/share/ drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/share/doc/libgclib-dev/ -rw-r--r-- root/root 562 2019-11-07 12:35 ./usr/share/doc/libgclib-dev/changelog.Debian.gz -rw-r--r-- root/root 10293 2019-11-07 12:30 ./usr/share/doc/libgclib-dev/copyright drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/share/doc/libgclib-dev/examples/ -rw-r--r-- root/root 1372 2019-11-06 19:48 ./usr/share/doc/libgclib-dev/examples/mdtest.cpp libgclib0-dbgsym_0.11.3-1_armhf.deb ----------------------------------- new Debian package, version 2.0. size 478120 bytes: control archive=552 bytes. 396 bytes, 13 lines control 106 bytes, 1 lines md5sums Package: libgclib0-dbgsym Source: libgclib Version: 0.11.3-1 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 544 Depends: libgclib0 (= 0.11.3-1) Section: debug Priority: optional Multi-Arch: same Description: debug symbols for libgclib0 Build-Ids: 6fcf54226fca3dae6134db0ecf6b8e01e6cc7c58 drwxr-xr-x root/root 0 2019-11-07 12:35 ./ drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/ drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/lib/ drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/lib/debug/ drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/lib/debug/.build-id/6f/ -rw-r--r-- root/root 545852 2019-11-07 12:35 ./usr/lib/debug/.build-id/6f/cf54226fca3dae6134db0ecf6b8e01e6cc7c58.debug drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/share/ drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/share/doc/ lrwxrwxrwx root/root 0 2019-11-07 12:35 ./usr/share/doc/libgclib0-dbgsym -> libgclib0 libgclib0_0.11.3-1_armhf.deb ---------------------------- new Debian package, version 2.0. size 119888 bytes: control archive=5840 bytes. 1141 bytes, 24 lines control 226 bytes, 3 lines md5sums 33 bytes, 1 lines shlibs 23307 bytes, 614 lines symbols 67 bytes, 2 lines triggers Package: libgclib0 Source: libgclib Version: 0.11.3-1 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 252 Depends: libc6 (>= 2.7), libgcc1 (>= 1:3.5), libstdc++6 (>= 5) Section: libs Priority: optional Multi-Arch: same Homepage: https://github.com/gpertea/gclib Description: C++ library to handle biological short sequence data This is an eclectic gathering of (mostly) C++ code which upstream used for some bioinformatics projects. The main idea is to provide lean code and efficient data structures, trying to avoid too many code dependencies of heavy libraries while minimizing production cycles (and this also implies a decent compile/build time -- looking at you, bloated configure scripts and lengthy compile times of Boost code or other heavy C++ template code..). . This code was gathered even before the C++ STL had been fully adopted as a cross-platform "standard". Since STL by itself is a bit heavier for most of the C++ needs, it is preferred to use simpler&leaner C++ classes or templates for basic strings, containers, basic algorithms etc. drwxr-xr-x root/root 0 2019-11-07 12:35 ./ drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/ drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/lib/ drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/lib/arm-linux-gnueabihf/ lrwxrwxrwx root/root 0 2019-11-07 12:35 ./usr/lib/arm-linux-gnueabihf/libgclib.so.0 -> libgclib.so.0.0.1 -rw-r--r-- root/root 210448 2019-11-07 12:35 ./usr/lib/arm-linux-gnueabihf/libgclib.so.0.0.1 drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/share/ drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-11-07 12:35 ./usr/share/doc/libgclib0/ -rw-r--r-- root/root 562 2019-11-07 12:35 ./usr/share/doc/libgclib0/changelog.Debian.gz -rw-r--r-- root/root 10293 2019-11-07 12:30 ./usr/share/doc/libgclib0/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [540 B] Get:5 copy:/<>/apt_archive ./ Packages [625 B] Fetched 2128 B in 0s (115 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libdevel-callchecker-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libdata-dump-perl ca-certificates libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libfreezethaw-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libpackage-stash-xs-perl libunicode-utf8-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libdevel-callchecker-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:armhf t1utils 0 upgraded, 75 newly installed, 0 to remove and 0 not upgraded. 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[33.6 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-2 [101 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.53-1 [68.9 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b5 [63.6 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libmldbm-perl all 2.05-2 [18.4 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.003006-1 [58.7 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:66 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unstable/main amd64 lintian all 2.33.0 [1278 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 8857 kB in 0s (37.0 MB/s) Selecting previously unselected package readline-common. 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Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.29-3) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 22544 Build-Time: 54 Distribution: unstable Foreign Architectures: armhf Host Architecture: armhf Install-Time: 17 Job: libgclib_0.11.3-1 Lintian: pass Machine Architecture: amd64 Package: libgclib Package-Time: 85 Source-Version: 0.11.3-1 Space: 22544 Status: successful Version: 0.11.3-1 -------------------------------------------------------------------------------- Finished at 2019-11-08T00:32:40Z Build needed 00:01:25, 22544k disk space