sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on gcc131.bak.milne.osuosl.org +==============================================================================+ | libgkarrays 2.1.0+dfsg-2 (armel) Wed, 27 Feb 2019 14:32:47 +0000 | +==============================================================================+ Package: libgkarrays Version: 2.1.0+dfsg-2 Source Version: 2.1.0+dfsg-2 Distribution: unstable Machine Architecture: amd64 Host Architecture: armel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-1f17be7e-2037-4e7c-a365-69c6cb71d509' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [242 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-02-27-0813.20.pdiff [7513 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-02-27-0813.20.pdiff [5593 B] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-02-27-0813.20.pdiff [7513 B] Get:6 http://debian.oregonstate.edu/debian unstable/main armel Packages [8037 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-02-27-0813.20.pdiff [5593 B] Fetched 8348 kB in 2s (4707 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'libgkarrays' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libgkarrays.git Please use: git clone https://salsa.debian.org/med-team/libgkarrays.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 111 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main libgkarrays 2.1.0+dfsg-2 (dsc) [2088 B] Get:2 http://debian.oregonstate.edu/debian unstable/main libgkarrays 2.1.0+dfsg-2 (tar) [97.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main libgkarrays 2.1.0+dfsg-2 (diff) [10.6 kB] Fetched 111 kB in 0s (2215 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/libgkarrays-91e1pN/libgkarrays-2.1.0+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/libgkarrays-91e1pN' with '<>' +------------------------------------------------------------------------------+ | Install crossbuild-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64 Filtered Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64 dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-nw7kT2/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-nw7kT2/apt_archive ./ InRelease Get:2 copy:/<>/resolver-nw7kT2/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-nw7kT2/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-nw7kT2/apt_archive ./ Sources [359 B] Get:5 copy:/<>/resolver-nw7kT2/apt_archive ./ Packages [450 B] Fetched 1766 B in 0s (104 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils-arm-linux-gnueabi cpp-8-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel dpkg-cross file g++-8-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-8-arm-linux-gnueabi gcc-8-arm-linux-gnueabi-base gcc-8-cross-base gcc-arm-linux-gnueabi libasan5-armel-cross libatomic1-armel-cross libc6-armel-cross libc6-dev-armel-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-armel-cross libgcc1-armel-cross libgomp1-armel-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-armel-cross libstdc++6-armel-cross libubsan1-armel-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-armel-cross sensible-utils ucf Suggested packages: binutils-doc gcc-8-locales cpp-doc binutils-multiarch gcc-8-doc libstdc++6-8-dbg-armel-cross libgcc1-dbg-armel-cross libgomp1-dbg-armel-cross libitm1-dbg-armel-cross libatomic1-dbg-armel-cross libasan5-dbg-armel-cross liblsan0-dbg-armel-cross libtsan0-dbg-armel-cross libubsan1-dbg-armel-cross libmpx2-dbg-armel-cross libquadmath0-dbg-armel-cross manpages-dev autoconf automake libtool flex bison gdb-arm-linux-gnueabi gcc-doc libyaml-shell-perl Recommended packages: libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl The following NEW packages will be installed: binutils-arm-linux-gnueabi cpp-8-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel dpkg-cross file g++-8-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-8-arm-linux-gnueabi gcc-8-arm-linux-gnueabi-base gcc-8-cross-base gcc-arm-linux-gnueabi libasan5-armel-cross libatomic1-armel-cross libc6-armel-cross libc6-dev-armel-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-armel-cross libgcc1-armel-cross libgomp1-armel-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-armel-cross libstdc++6-armel-cross libubsan1-armel-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-armel-cross sbuild-build-depends-core-dummy:armel sensible-utils ucf 0 upgraded, 44 newly installed, 0 to remove and 0 not upgraded. Need to get 41.8 MB of archives. After this operation, 154 MB of additional disk space will be used. Get:1 copy:/<>/resolver-nw7kT2/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [876 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.35-2 [242 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.35-2 [117 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.35-2 [66.1 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabi amd64 2.31.1-14 [2832 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-arm-linux-gnueabi-base amd64 8.2.0-20cross1 [190 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-8-arm-linux-gnueabi amd64 8.2.0-20cross1 [6557 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabi amd64 4:8.2.0-2 [16.4 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-2 [39.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-cross-base all 8.2.0-20cross1 [185 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armel-cross all 2.28-4cross1 [1188 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-armel-cross all 1:8.2.0-20cross1 [38.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armel-cross all 8.2.0-20cross1 [65.5 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armel-cross all 8.2.0-20cross1 [8812 B] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armel-cross all 8.2.0-20cross1 [287 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-armel-cross all 8.2.0-20cross1 [313 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armel-cross all 8.2.0-20cross1 [103 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-8-dev-armel-cross all 8.2.0-20cross1 [605 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-arm-linux-gnueabi amd64 8.2.0-20cross1 [6976 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabi amd64 4:8.2.0-2 [1464 B] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armel-cross all 4.19.13-1cross1 [1196 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armel-cross all 2.28-4cross1 [2181 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-8-dev-armel-cross all 8.2.0-20cross1 [1539 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 g++-8-arm-linux-gnueabi amd64 8.2.0-20cross1 [7132 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabi amd64 4:8.2.0-2 [1176 B] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.1-6 [8292 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.00+dfsg-1 [58.6 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1 [344 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.27-1 [66.8 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-2 [38.5 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-2 [49.3 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armel all 12.5 [6544 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 41.8 MB in 1s (78.1 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11913 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-3+b4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-3+b4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.35-2_amd64.deb ... Unpacking libmagic-mgc (1:5.35-2) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.35-2_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-2) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.35-2_amd64.deb ... Unpacking file (1:5.35-2) ... Selecting previously unselected package ucf. Preparing to unpack .../05-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... 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Setting up sensible-utils (0.0.12) ... Setting up libc6-dev-armel-cross (2.28-4cross1) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up libgomp1-armel-cross (8.2.0-20cross1) ... Setting up libatomic1-armel-cross (8.2.0-20cross1) ... Setting up libgcc1-armel-cross (1:8.2.0-20cross1) ... Setting up ucf (3.0038+nmu1) ... Setting up libstdc++6-armel-cross (8.2.0-20cross1) ... Setting up libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libasan5-armel-cross (8.2.0-20cross1) ... Setting up libubsan1-armel-cross (8.2.0-20cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-8-dev-armel-cross (8.2.0-20cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up gcc-8-arm-linux-gnueabi (8.2.0-20cross1) ... Setting up libstdc++-8-dev-armel-cross (8.2.0-20cross1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up gcc-arm-linux-gnueabi (4:8.2.0-2) ... Setting up libdebian-dpkgcross-perl (2.6.15-2) ... Setting up g++-8-arm-linux-gnueabi (8.2.0-20cross1) ... Setting up g++-arm-linux-gnueabi (4:8.2.0-2) ... Setting up dpkg-cross (2.6.15-2) ... Setting up crossbuild-essential-armel (12.5) ... Setting up sbuild-build-depends-core-dummy:armel (0.invalid.0) ... Processing triggers for libc-bin (2.28-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armel included in any) Setup apt archive ----------------- dpkg-deb: building package 'sbuild-build-depends-essential-dummy' in '/<>/resolver-nw7kT2/apt_archive/sbuild-build-depends-essential-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-nw7kT2/apt_archive ./ InRelease Get:2 copy:/<>/resolver-nw7kT2/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-nw7kT2/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-nw7kT2/apt_archive ./ Sources [481 B] Get:5 copy:/<>/resolver-nw7kT2/apt_archive ./ Packages [569 B] Fetched 2013 B in 0s (118 kB/s) Reading package lists... Reading package lists... Install essential build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-essential-dummy:armel 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 840 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-nw7kT2/apt_archive ./ sbuild-build-depends-essential-dummy 0.invalid.0 [840 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 840 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-essential-dummy:armel. (Reading database ... 14958 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-essential-dummy_0.invalid.0_armel.deb ... Unpacking sbuild-build-depends-essential-dummy:armel (0.invalid.0) ... Setting up sbuild-build-depends-essential-dummy:armel (0.invalid.0) ... +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), d-shlibs, zlib1g-dev Filtered Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), d-shlibs, zlib1g-dev dpkg-deb: building package 'sbuild-build-depends-libgkarrays-dummy' in '/<>/resolver-nw7kT2/apt_archive/sbuild-build-depends-libgkarrays-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-libgkarrays-dummy dpkg-scanpackages: info: Wrote 3 entries to output Packages file. Ign:1 copy:/<>/resolver-nw7kT2/apt_archive ./ InRelease Get:2 copy:/<>/resolver-nw7kT2/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-nw7kT2/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-nw7kT2/apt_archive ./ Sources [648 B] Get:5 copy:/<>/resolver-nw7kT2/apt_archive ./ Packages [733 B] Fetched 2344 B in 0s (120 kB/s) Reading package lists... Reading package lists... Install libgkarrays build dependencies (apt-based resolver) ----------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:armel gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armel libatomic1:armel libbsd0 libc6:armel libc6-dev:armel libcroco3 libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:armel libgcc1:armel libglib2.0-0 libgomp1:armel libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:armel libstdc++6:armel libtool libubsan1:armel libuchardet0 linux-libc-dev:armel m4 man-db po-debconf zlib1g:armel zlib1g-dev:armel Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armel libc-l10n:armel locales:armel manpages-dev:armel libstdc++-8-doc:armel libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:armel libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpm2 libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:armel gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armel libatomic1:armel libbsd0 libc6:armel libc6-dev:armel libcroco3 libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:armel libgcc1:armel libglib2.0-0 libgomp1:armel libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:armel libstdc++6:armel libtool libubsan1:armel libuchardet0 linux-libc-dev:armel m4 man-db po-debconf sbuild-build-depends-libgkarrays-dummy:armel zlib1g:armel zlib1g-dev:armel 0 upgraded, 43 newly installed, 0 to remove and 0 not upgraded. Need to get 18.8 MB of archives. After this operation, 83.2 MB of additional disk space will be used. Get:1 copy:/<>/resolver-nw7kT2/apt_archive ./ sbuild-build-depends-libgkarrays-dummy 0.invalid.0 [892 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.9.1-2 [99.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-2 [917 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 d-shlibs all 0.84 [17.2 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-10 [547 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.1.1-1 [19.7 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.1.1-1 [13.0 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1 [160 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.12-3 [78.0 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.58.3-1 [1258 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20181013-2 [102 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.1.1 [1016 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main armel gcc-8-base armel 8.3.0-2 [190 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main armel libgcc1 armel 1:8.3.0-2 [38.5 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main armel libc6 armel 2.28-7 [2398 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main armel libstdc++6 armel 8.3.0-2 [324 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main armel libasan5 armel 8.3.0-2 [317 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main armel libatomic1 armel 8.3.0-2 [8956 B] Get:36 http://debian.oregonstate.edu/debian unstable/main armel linux-libc-dev armel 4.19.20-1 [1124 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main armel libc6-dev armel 2.28-7 [2185 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main armel libgomp1 armel 8.3.0-2 [67.2 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main armel libubsan1 armel 8.3.0-2 [103 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main armel libgcc-8-dev armel 8.3.0-2 [603 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main armel libstdc++-8-dev armel 8.3.0-2 [1570 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main armel zlib1g armel 1:1.2.11.dfsg-1 [86.5 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main armel zlib1g-dev armel 1:1.2.11.dfsg-1 [206 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 18.8 MB in 0s (72.0 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 14958 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-2_amd64.deb ... Unpacking groff-base (1.22.4-2) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.19.8.1-9_amd64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../07-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../08-m4_1.4.18-2_amd64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../09-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../10-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../11-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../12-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../13-d-shlibs_0.84_all.deb ... Unpacking d-shlibs (0.84) ... Selecting previously unselected package libtool. Preparing to unpack .../14-libtool_2.4.6-10_all.deb ... Unpacking libtool (2.4.6-10) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../15-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../16-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../17-libfile-stripnondeterminism-perl_1.1.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../18-dh-strip-nondeterminism_1.1.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.1-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../19-libelf1_0.176-1_amd64.deb ... Unpacking libelf1:amd64 (0.176-1) ... Selecting previously unselected package dwz. Preparing to unpack .../20-dwz_0.12-3_amd64.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../21-libglib2.0-0_2.58.3-1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.58.3-1) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../22-libcroco3_0.6.12-3_amd64.deb ... Unpacking libcroco3:amd64 (0.6.12-3) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../23-libncurses6_6.1+20181013-2_amd64.deb ... Unpacking libncurses6:amd64 (6.1+20181013-2) ... Selecting previously unselected package gettext. Preparing to unpack .../24-gettext_0.19.8.1-9_amd64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. 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Unpacking libstdc++6:armel (8.3.0-2) ... Selecting previously unselected package libasan5:armel. Preparing to unpack .../32-libasan5_8.3.0-2_armel.deb ... Unpacking libasan5:armel (8.3.0-2) ... Selecting previously unselected package libatomic1:armel. Preparing to unpack .../33-libatomic1_8.3.0-2_armel.deb ... Unpacking libatomic1:armel (8.3.0-2) ... Selecting previously unselected package linux-libc-dev:armel. Preparing to unpack .../34-linux-libc-dev_4.19.20-1_armel.deb ... Unpacking linux-libc-dev:armel (4.19.20-1) ... Selecting previously unselected package libc6-dev:armel. Preparing to unpack .../35-libc6-dev_2.28-7_armel.deb ... Unpacking libc6-dev:armel (2.28-7) ... Selecting previously unselected package libgomp1:armel. Preparing to unpack .../36-libgomp1_8.3.0-2_armel.deb ... Unpacking libgomp1:armel (8.3.0-2) ... Selecting previously unselected package libubsan1:armel. Preparing to unpack .../37-libubsan1_8.3.0-2_armel.deb ... Unpacking libubsan1:armel (8.3.0-2) ... Selecting previously unselected package libgcc-8-dev:armel. Preparing to unpack .../38-libgcc-8-dev_8.3.0-2_armel.deb ... Unpacking libgcc-8-dev:armel (8.3.0-2) ... Selecting previously unselected package libstdc++-8-dev:armel. Preparing to unpack .../39-libstdc++-8-dev_8.3.0-2_armel.deb ... Unpacking libstdc++-8-dev:armel (8.3.0-2) ... Selecting previously unselected package zlib1g:armel. Preparing to unpack .../40-zlib1g_1%3a1.2.11.dfsg-1_armel.deb ... Unpacking zlib1g:armel (1:1.2.11.dfsg-1) ... Selecting previously unselected package zlib1g-dev:armel. Preparing to unpack .../41-zlib1g-dev_1%3a1.2.11.dfsg-1_armel.deb ... Unpacking zlib1g-dev:armel (1:1.2.11.dfsg-1) ... Selecting previously unselected package sbuild-build-depends-libgkarrays-dummy:armel. Preparing to unpack .../42-sbuild-build-depends-libgkarrays-dummy_0.invalid.0_armel.deb ... Unpacking sbuild-build-depends-libgkarrays-dummy:armel (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:amd64 (2.58.3-1) ... No schema files found: doing nothing. Setting up linux-libc-dev:armel (4.19.20-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up autotools-dev (20180224.1) ... Setting up libncurses6:amd64 (6.1+20181013-2) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up gcc-8-base:armel (8.3.0-2) ... Setting up autopoint (0.19.8.1-9) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up d-shlibs (0.84) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libbsd0:amd64 (0.9.1-2) ... Setting up libelf1:amd64 (0.176-1) ... Setting up libfile-stripnondeterminism-perl (1.1.1-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libtool (2.4.6-10) ... Setting up m4 (1.4.18-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-2) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libc6:armel (2.28-7) ... Setting up libc6-dev:armel (2.28-7) ... Setting up libgcc1:armel (1:8.3.0-2) ... Setting up zlib1g:armel (1:1.2.11.dfsg-1) ... Setting up libgomp1:armel (8.3.0-2) ... Setting up dh-autoreconf (19) ... Setting up libatomic1:armel (8.3.0-2) ... Setting up zlib1g-dev:armel (1:1.2.11.dfsg-1) ... Setting up libstdc++6:armel (8.3.0-2) ... Setting up debhelper (12.1.1) ... Setting up libasan5:armel (8.3.0-2) ... Setting up libubsan1:armel (8.3.0-2) ... Setting up dh-strip-nondeterminism (1.1.1-1) ... Setting up libgcc-8-dev:armel (8.3.0-2) ... Setting up libstdc++-8-dev:armel (8.3.0-2) ... Setting up sbuild-build-depends-libgkarrays-dummy:armel (0.invalid.0) ... Processing triggers for libc-bin (2.28-7) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.31.1-14 dpkg-dev_1.19.5 g++-8_8.3.0-2 gcc-8_8.3.0-2 libc6-dev_2.28-7 libstdc++-8-dev_8.3.0-2 libstdc++-8-dev-armel-cross_8.2.0-20cross1 libstdc++6_8.3.0-2 libstdc++6-armel-cross_8.2.0-20cross1 linux-libc-dev_4.19.20-1 Package versions: adduser_3.118 apt_1.8.0~rc4 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1 base-passwd_3.5.46 bash_5.0-2 binutils_2.31.1-14 binutils-arm-linux-gnueabi_2.31.1-14 binutils-common_2.31.1-14 binutils-x86-64-linux-gnu_2.31.1-14 bsdmainutils_11.1.2+b1 bsdutils_1:2.33.1-0.1 build-essential_12.5 bzip2_1.0.6-9 coreutils_8.30-2 cpp_4:8.2.0-2 cpp-8_8.3.0-2 cpp-8-arm-linux-gnueabi_8.2.0-20cross1 cpp-arm-linux-gnueabi_4:8.2.0-2 cross-config_2.6.15-2 crossbuild-essential-armel_12.5 d-shlibs_0.84 dash_0.5.10.2-5 debconf_1.5.71 debhelper_12.1.1 debian-archive-keyring_2018.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-strip-nondeterminism_1.1.1-1 diffutils_1:3.7-2 dpkg_1.19.5 dpkg-cross_2.6.15-2 dpkg-dev_1.19.5 dwz_0.12-3 e2fsprogs_1.44.5-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-2 findutils_4.6.0+git+20190209-2 g++_4:8.2.0-2 g++-8_8.3.0-2 g++-8-arm-linux-gnueabi_8.2.0-20cross1 g++-arm-linux-gnueabi_4:8.2.0-2 gcc_4:8.2.0-2 gcc-8_8.3.0-2 gcc-8-arm-linux-gnueabi_8.2.0-20cross1 gcc-8-arm-linux-gnueabi-base_8.2.0-20cross1 gcc-8-base_8.3.0-2 gcc-8-cross-base_8.2.0-20cross1 gcc-arm-linux-gnueabi_4:8.2.0-2 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.12-1 grep_3.3-1 groff-base_1.22.4-2 gzip_1.9-3 hostname_3.21 init-system-helpers_1.56+nmu1 intltool-debian_0.35.0+20060710.5 libacl1_2.2.52-5 libapt-pkg5.0_1.8.0~rc4 libarchive-zip-perl_1.64-1 libasan5_8.3.0-2 libasan5-armel-cross_8.2.0-20cross1 libatomic1_8.3.0-2 libatomic1-armel-cross_8.2.0-20cross1 libattr1_1:2.4.47-4 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2 libbinutils_2.31.1-14 libblkid1_2.33.1-0.1 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9 libc-bin_2.28-7 libc-dev-bin_2.28-7 libc6_2.28-7 libc6-armel-cross_2.28-4cross1 libc6-dev_2.28-7 libc6-dev-armel-cross_2.28-4cross1 libcap-ng0_0.7.9-2 libcc1-0_8.3.0-2 libcom-err2_1.44.5-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.12-3 libdb5.3_5.3.28+dfsg1-0.5 libdebconfclient0_0.247 libdebian-dpkgcross-perl_2.6.15-2 libdpkg-perl_1.19.5 libelf1_0.176-1 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.1.1-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-2 libgcc-8-dev-armel-cross_8.2.0-20cross1 libgcc1_1:8.3.0-2 libgcc1-armel-cross_1:8.2.0-20cross1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-3 libgdbm6_1.18.1-3 libglib2.0-0_2.58.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.6-2 libgomp1_8.3.0-2 libgomp1-armel-cross_8.2.0-20cross1 libgpg-error0_1.35-1 libhogweed4_3.4.1-1 libicu63_63.1-6 libidn2-0_2.0.5-1 libio-string-perl_1.08-3 libisl19_0.20-2 libitm1_8.3.0-2 liblocale-gettext-perl_1.07-3+b4 liblsan0_8.3.0-2 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-2 libmagic1_1:5.35-2 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-2 libncurses6_6.1+20181013-2 libncursesw6_6.1+20181013-2 libnettle6_3.4.1-1 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre3_2:8.39-11 libperl5.28_5.28.1-4 libpipeline1_1.5.1-2 libquadmath0_8.3.0-2 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libss2_1.44.5-1 libstdc++-8-dev_8.3.0-2 libstdc++-8-dev-armel-cross_8.2.0-20cross1 libstdc++6_8.3.0-2 libstdc++6-armel-cross_8.2.0-20cross1 libsystemd0_241-1 libtasn1-6_4.13-3 libtinfo6_6.1+20181013-2 libtool_2.4.6-10 libtsan0_8.3.0-2 libubsan1_8.3.0-2 libubsan1-armel-cross_8.2.0-20cross1 libuchardet0_0.0.6-3 libudev1_241-1 libunistring2_0.9.10-1 libuuid1_2.33.1-0.1 libxml-libxml-perl_2.0134+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.00+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-perl_1.27-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.20-1 linux-libc-dev-armel-cross_4.19.13-1cross1 login_1:4.5-1.1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17+b3 mount_2.33.1-0.1 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-4 perl-base_5.28.1-4 perl-modules-5.28_5.28.1-4 po-debconf_1.0.21 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-essential-dummy_0.invalid.0 sbuild-build-depends-libgkarrays-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-8 tar_1.30+dfsg-5 tzdata_2018i-1 ucf_3.0038+nmu1 util-linux_2.33.1-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Tue Jul 17 19:10:58 2018 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libgkarrays_2.1.0+dfsg-2.dsc dpkg-source: info: extracting libgkarrays in /<>/libgkarrays-2.1.0+dfsg dpkg-source: info: unpacking libgkarrays_2.1.0+dfsg.orig.tar.xz dpkg-source: info: unpacking libgkarrays_2.1.0+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying proper_soname.patch dpkg-source: info: applying fix_pkg-config.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-1f17be7e-2037-4e7c-a365-69c6cb71d509 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package libgkarrays dpkg-buildpackage: info: source version 2.1.0+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabi does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armel fakeroot debian/rules clean dh clean dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a aclocal: warning: couldn't open directory 'config/m4': No such file or directory aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' aclocal: warning: couldn't open directory 'm4': No such file or directory libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:32: installing './compile' configure.in:32: installing './config.guess' configure.in:32: installing './config.sub' configure.in:31: installing './install-sh' configure.in:31: installing './missing' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' doc/Makefile.am:2: warning: suffix '.texinfo' for Texinfo files is discouraged; use '.texi' instead doc/Makefile.am:2: installing 'doc/texinfo.tex' libProgressBar/Makefile.am: installing './depcomp' libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'config'. libtoolize: copying file 'config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'config/m4'. libtoolize: copying file 'config/m4/libtool.m4' libtoolize: copying file 'config/m4/ltoptions.m4' libtoolize: copying file 'config/m4/ltsugar.m4' libtoolize: copying file 'config/m4/ltversion.m4' libtoolize: copying file 'config/m4/lt~obsolete.m4' configure.ac:213: installing 'config/compile' configure.ac:231: installing 'config/config.guess' configure.ac:231: installing 'config/config.sub' configure.ac:206: installing 'config/install-sh' configure.ac:206: installing 'config/missing' doc/Makefile.am:107: installing 'config/texinfo.tex' src/Makefile.am:117: warning: source file '$(SUX_DIR)/rank9b.cpp' is in a subdirectory, src/Makefile.am:117: but option 'subdir-objects' is disabled automake: warning: possible forward-incompatibility. automake: At least a source file is in a subdirectory, but the 'subdir-objects' automake: automake option hasn't been enabled. For now, the corresponding output automake: object file(s) will be placed in the top-level directory. However, automake: this behaviour will change in future Automake versions: they will automake: unconditionally cause object files to be placed in the same subdirectory automake: of the corresponding sources. automake: You are advised to start using 'subdir-objects' option throughout your automake: project, to avoid future incompatibilities. src/Makefile.am: installing 'config/depcomp' tests/Makefile.am:125: warning: wildcard dataset/*.fa: non-POSIX variable name tests/Makefile.am:125: (probably a GNU make extension) parallel-tests: installing 'config/test-driver' dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabi --libexecdir=\${prefix}/lib/arm-linux-gnueabi --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=arm-linux-gnueabi configure: loading site script /etc/dpkg-cross/cross-config.armel checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for arm-linux-gnueabi-strip... arm-linux-gnueabi-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for arm-linux-gnueabi-g++... arm-linux-gnueabi-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether arm-linux-gnueabi-g++ accepts -g... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of arm-linux-gnueabi-g++... none checking for gawk... (cached) mawk checking for arm-linux-gnueabi-gcc... arm-linux-gnueabi-gcc checking whether we are using the GNU C compiler... yes checking whether arm-linux-gnueabi-gcc accepts -g... yes checking for arm-linux-gnueabi-gcc option to accept ISO C89... none needed checking whether arm-linux-gnueabi-gcc understands -c and -o together... yes checking dependency style of arm-linux-gnueabi-gcc... none checking how to run the C preprocessor... arm-linux-gnueabi-gcc -E checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking for texi2dvi... no checking for pdftex... no checking for kpsewhich... no configure: WARNING: The 'texi2dvi' or 'pdftex' program could not be found. This isn't critical, but it means that you won't be able to create the documentation and thus to make releases. configure: WARNING: The 'texi2dvi' or 'pdftex' is missing a correct latex installation. This isn't critical, but it means that you won't be able to create the documentation and thus to make releases. checking build system type... x86_64-pc-linux-gnu checking host system type... arm-unknown-linux-gnueabi checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by arm-linux-gnueabi-gcc... /usr/arm-linux-gnueabi/bin/ld checking if the linker (/usr/arm-linux-gnueabi/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/arm-linux-gnueabi-nm -B checking the name lister (/usr/bin/arm-linux-gnueabi-nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to arm-unknown-linux-gnueabi format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/arm-linux-gnueabi/bin/ld option to reload object files... -r checking for arm-linux-gnueabi-objdump... arm-linux-gnueabi-objdump checking how to recognize dependent libraries... pass_all checking for arm-linux-gnueabi-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for arm-linux-gnueabi-ar... arm-linux-gnueabi-ar checking for archiver @FILE support... @ checking for arm-linux-gnueabi-strip... (cached) arm-linux-gnueabi-strip checking for arm-linux-gnueabi-ranlib... arm-linux-gnueabi-ranlib checking command to parse /usr/bin/arm-linux-gnueabi-nm -B output from arm-linux-gnueabi-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for arm-linux-gnueabi-mt... no checking for mt... no checking if : is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if arm-linux-gnueabi-gcc supports -fno-rtti -fno-exceptions... no checking for arm-linux-gnueabi-gcc option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabi-gcc PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabi-gcc static flag -static works... yes checking if arm-linux-gnueabi-gcc supports -c -o file.o... yes checking if arm-linux-gnueabi-gcc supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabi-gcc linker (/usr/arm-linux-gnueabi/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... arm-linux-gnueabi-g++ -E checking for ld used by arm-linux-gnueabi-g++... /usr/arm-linux-gnueabi/bin/ld checking if the linker (/usr/arm-linux-gnueabi/bin/ld) is GNU ld... yes checking whether the arm-linux-gnueabi-g++ linker (/usr/arm-linux-gnueabi/bin/ld) supports shared libraries... yes checking for arm-linux-gnueabi-g++ option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabi-g++ PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabi-g++ static flag -static works... yes checking if arm-linux-gnueabi-g++ supports -c -o file.o... yes checking if arm-linux-gnueabi-g++ supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabi-g++ linker (/usr/arm-linux-gnueabi/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ld used by arm-linux-gnueabi-gcc... (cached) /usr/arm-linux-gnueabi/bin/ld checking if the linker (/usr/arm-linux-gnueabi/bin/ld) is GNU ld... (cached) yes checking for dpkg... /usr/bin/dpkg checking for stdint.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for inline... inline checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... (cached) yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... (cached) yes checking for gettimeofday... yes checking for memset... yes checking for select... yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for size_t... yes checking for uint8_t... yes checking for uint32_t... yes checking for uint64_t... yes checking for unsigned long long int... yes checking for gzread in -lz... yes checking for pthread_create in -lpthread... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating postinst chmod: cannot access 'prerm': No such file or directory config.status: creating prerm config.status: creating control config.status: creating libGkArrays.pc config.status: creating Makefile config.status: creating src/Makefile config.status: creating tests/Makefile config.status: creating src/sux/Makefile config.status: creating src/kseq/Makefile config.status: creating doc/Makefile config.status: creating doc/libGkArrays.3 config.status: creating doc/package.texi config.status: creating config/config.h config.status: executing depfiles commands config.status: executing libtool commands === configuring in src/libProgressBar-1.2.0 (/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0) configure: running /bin/bash ./configure --disable-option-checking '--prefix=/usr' '--build=x86_64-linux-gnu' '--includedir=${prefix}/include' '--mandir=${prefix}/share/man' '--infodir=${prefix}/share/info' '--sysconfdir=/etc' '--localstatedir=/var' '--disable-silent-rules' '--libdir=${prefix}/lib/arm-linux-gnueabi' '--libexecdir=${prefix}/lib/arm-linux-gnueabi' '--runstatedir=/run' '--disable-maintainer-mode' '--disable-dependency-tracking' '--host=arm-linux-gnueabi' 'build_alias=x86_64-linux-gnu' 'host_alias=arm-linux-gnueabi' 'CXXFLAGS=-g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security' 'LDFLAGS=-Wl,-z,relro -Wl,-z,now' 'CPPFLAGS=-Wdate-time -D_FORTIFY_SOURCE=2' 'CFLAGS=-g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security' --cache-file=/dev/null --srcdir=. configure: loading site script /etc/dpkg-cross/cross-config.armel checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for arm-linux-gnueabi-strip... arm-linux-gnueabi-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking build system type... x86_64-pc-linux-gnu checking host system type... arm-unknown-linux-gnueabi checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for arm-linux-gnueabi-gcc... arm-linux-gnueabi-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether arm-linux-gnueabi-gcc accepts -g... yes checking for arm-linux-gnueabi-gcc option to accept ISO C89... none needed checking whether arm-linux-gnueabi-gcc understands -c and -o together... yes checking dependency style of arm-linux-gnueabi-gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by arm-linux-gnueabi-gcc... /usr/arm-linux-gnueabi/bin/ld checking if the linker (/usr/arm-linux-gnueabi/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/arm-linux-gnueabi-nm -B checking the name lister (/usr/bin/arm-linux-gnueabi-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to arm-unknown-linux-gnueabi format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/arm-linux-gnueabi/bin/ld option to reload object files... -r checking for arm-linux-gnueabi-objdump... arm-linux-gnueabi-objdump checking how to recognize dependent libraries... pass_all checking for arm-linux-gnueabi-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for arm-linux-gnueabi-ar... arm-linux-gnueabi-ar checking for archiver @FILE support... @ checking for arm-linux-gnueabi-strip... (cached) arm-linux-gnueabi-strip checking for arm-linux-gnueabi-ranlib... arm-linux-gnueabi-ranlib checking command to parse /usr/bin/arm-linux-gnueabi-nm -B output from arm-linux-gnueabi-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for arm-linux-gnueabi-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... arm-linux-gnueabi-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if arm-linux-gnueabi-gcc supports -fno-rtti -fno-exceptions... no checking for arm-linux-gnueabi-gcc option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabi-gcc PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabi-gcc static flag -static works... yes checking if arm-linux-gnueabi-gcc supports -c -o file.o... yes checking if arm-linux-gnueabi-gcc supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabi-gcc linker (/usr/arm-linux-gnueabi/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for arm-linux-gnueabi-gcc... (cached) arm-linux-gnueabi-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether arm-linux-gnueabi-gcc accepts -g... (cached) yes checking for arm-linux-gnueabi-gcc option to accept ISO C89... (cached) none needed checking whether arm-linux-gnueabi-gcc understands -c and -o together... (cached) yes checking dependency style of arm-linux-gnueabi-gcc... (cached) none checking for arm-linux-gnueabi-g++... arm-linux-gnueabi-g++ checking whether we are using the GNU C++ compiler... yes checking whether arm-linux-gnueabi-g++ accepts -g... yes checking dependency style of arm-linux-gnueabi-g++... none checking how to run the C++ preprocessor... arm-linux-gnueabi-g++ -E checking for ld used by arm-linux-gnueabi-g++... /usr/arm-linux-gnueabi/bin/ld checking if the linker (/usr/arm-linux-gnueabi/bin/ld) is GNU ld... yes checking whether the arm-linux-gnueabi-g++ linker (/usr/arm-linux-gnueabi/bin/ld) supports shared libraries... yes checking for arm-linux-gnueabi-g++ option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabi-g++ PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabi-g++ static flag -static works... yes checking if arm-linux-gnueabi-g++ supports -c -o file.o... yes checking if arm-linux-gnueabi-g++ supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabi-g++ linker (/usr/arm-linux-gnueabi/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for dpkg... /usr/bin/dpkg checking for rpmbuild... no checking for rpm... no checking for texi2dvi... no checking for pdftex... no checking for kpsewhich... no configure: WARNING: The 'texi2dvi' or 'pdftex' program could not be found. This isn't critical, but it means that you won't be able to create the documentation and thus to make releases. configure: WARNING: The 'texi2dvi' or 'pdftex' is missing a correct latex installation. This isn't critical, but it means that you won't be able to create the documentation and thus to make releases. checking for an ANSI C-conforming const... yes checking for inline... inline checking whether sys/types.h defines makedev... no checking sys/mkdev.h usability... no checking sys/mkdev.h presence... no checking for sys/mkdev.h... no checking sys/sysmacros.h usability... yes checking sys/sysmacros.h presence... yes checking for sys/sysmacros.h... yes checking for size_t... yes checking for working alloca.h... yes checking for alloca... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for struct stat.st_blocks... yes checking whether ln -s works... yes checking for ANSI C header files... (cached) yes checking for unistd.h... (cached) yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking for sys/sysmacros.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking for memory.h... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking alloca.h usability... yes checking alloca.h presence... yes checking for alloca.h... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating postinst chmod: cannot access 'prerm': No such file or directory config.status: creating prerm config.status: creating libProgressBar.lsm config.status: creating libProgressBar.spec config.status: creating control config.status: creating libProgressBar.pc config.status: creating Makefile config.status: creating libProgressBar/Makefile config.status: creating doc/Makefile config.status: creating doc/libProgressBar.3 config.status: creating libProgressBar/config.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build -a make -j1 make[1]: Entering directory '/<>/libgkarrays-2.1.0+dfsg' Making all in src make[2]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src' Making all in kseq make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/kseq' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/kseq' Making all in sux make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/sux' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/sux' Making all in libProgressBar-1.2.0 make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' Making all in libProgressBar make[4]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' make all-am make[5]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -O6 -Wall --pedantic --ansi -c -o testPB.o testPB.cpp /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -O6 -Wall --pedantic --ansi -c -o progressBar.lo progressBar.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -O6 -Wall --pedantic --ansi -c progressBar.cpp -fPIC -DPIC -o .libs/progressBar.o libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -O6 -Wall --pedantic --ansi -c progressBar.cpp -o progressBar.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link arm-linux-gnueabi-g++ -O6 -Wall --pedantic --ansi -version-info 1:2:1 -Wl,-z,relro -Wl,-z,now -o libProgressBar.la -rpath /usr/lib/arm-linux-gnueabi progressBar.lo libtool: link: arm-linux-gnueabi-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc-cross/arm-linux-gnueabi/8/../../../../arm-linux-gnueabi/lib/crti.o /usr/lib/gcc-cross/arm-linux-gnueabi/8/crtbeginS.o .libs/progressBar.o -L/usr/lib/gcc-cross/arm-linux-gnueabi/8 -L/usr/lib/gcc-cross/arm-linux-gnueabi/8/../../../../arm-linux-gnueabi/lib -L/lib/arm-linux-gnueabi -L/usr/lib/arm-linux-gnueabi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc-cross/arm-linux-gnueabi/8/crtendS.o /usr/lib/gcc-cross/arm-linux-gnueabi/8/../../../../arm-linux-gnueabi/lib/crtn.o -O6 -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libProgressBar.so.0 -o .libs/libProgressBar.so.0.1.2 libtool: link: (cd ".libs" && rm -f "libProgressBar.so.0" && ln -s "libProgressBar.so.0.1.2" "libProgressBar.so.0") libtool: link: (cd ".libs" && rm -f "libProgressBar.so" && ln -s "libProgressBar.so.0.1.2" "libProgressBar.so") libtool: link: arm-linux-gnueabi-ar cru .libs/libProgressBar.a progressBar.o arm-linux-gnueabi-ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: arm-linux-gnueabi-ranlib .libs/libProgressBar.a libtool: link: ( cd ".libs" && rm -f "libProgressBar.la" && ln -s "../libProgressBar.la" "libProgressBar.la" ) /bin/bash ../libtool --tag=CXX --mode=link arm-linux-gnueabi-g++ -O6 -Wall --pedantic --ansi -lProgressBar -Wl,-z,relro -Wl,-z,now -o testProgressBar testPB.o libProgressBar.la libtool: link: arm-linux-gnueabi-g++ -O6 -Wall --pedantic --ansi -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/testProgressBar testPB.o /<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs/libProgressBar.so ./.libs/libProgressBar.so make[5]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' make[4]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' make[4]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' cp "libProgressBar.pc" "libProgressBar-1.2.0.pc" make[4]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src' arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o buildTables.o buildTables.cpp In file included from ./readsReader.h:109, from ./gkArrays.h:115, from buildTables.cpp:111: ./kseq/kseq.h:169:14: warning: 'int kseq_read(kseq_t*)' defined but not used [-Wunused-function] static int kseq_read(kseq_t *seq) \ ^~~~~~~~~ ./kseq/kseq.h:227:3: note: in expansion of macro '__KSEQ_READ' __KSEQ_READ ^~~~~~~~~~~ ./readsReader.h:111:1: note: in expansion of macro 'KSEQ_INIT' KSEQ_INIT(gzFile, gzread) ^~~~~~~~~ /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gkArrays.lo gkArrays.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkArrays.cpp -fPIC -DPIC -o .libs/gkArrays.o In file included from readsReader.h:109, from gkArrays.h:115, from gkArrays.cpp:113: kseq/kseq.h:169:14: warning: 'int kseq_read(kseq_t*)' defined but not used [-Wunused-function] static int kseq_read(kseq_t *seq) \ ^~~~~~~~~ kseq/kseq.h:227:3: note: in expansion of macro '__KSEQ_READ' __KSEQ_READ ^~~~~~~~~~~ readsReader.h:111:1: note: in expansion of macro 'KSEQ_INIT' KSEQ_INIT(gzFile, gzread) ^~~~~~~~~ libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkArrays.cpp -o gkArrays.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o solArray.lo solArray.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c solArray.cpp -fPIC -DPIC -o .libs/solArray.o libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c solArray.cpp -o solArray.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utils.lo utils.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c utils.cpp -fPIC -DPIC -o .libs/utils.o libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c utils.cpp -o utils.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gkArraysBuilder.lo gkArraysBuilder.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkArraysBuilder.cpp -fPIC -DPIC -o .libs/gkArraysBuilder.o In file included from readsReader.h:109, from gkArrays.h:115, from gkArraysBuilder.h:105, from gkArraysBuilder.cpp:103: kseq/kseq.h:169:14: warning: 'int kseq_read(kseq_t*)' defined but not used [-Wunused-function] static int kseq_read(kseq_t *seq) \ ^~~~~~~~~ kseq/kseq.h:227:3: note: in expansion of macro '__KSEQ_READ' __KSEQ_READ ^~~~~~~~~~~ readsReader.h:111:1: note: in expansion of macro 'KSEQ_INIT' KSEQ_INIT(gzFile, gzread) ^~~~~~~~~ libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkArraysBuilder.cpp -o gkArraysBuilder.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gkSABuilder.lo gkSABuilder.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkSABuilder.cpp -fPIC -DPIC -o .libs/gkSABuilder.o gkSABuilder.cpp: In function 'int64_t gkarrays::partition(gkarrays::SolArray*, gkarrays::SolArray*, uintSA, uintSA, uintSA)': gkSABuilder.cpp:340:17: warning: suggest parentheses around '&&' within '||' [-Wparentheses] while(i <= end && values->get(i) < pivotv||((pivotv==values->get(i)) &&(pivotp>sa->get(i)))); ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from ./readsReader.h:109, from ./gkArrays.h:115, from ./gkSABuilder.h:108, from gkSABuilder.cpp:104: ./readsReader.h: At global scope: ./kseq/kseq.h:169:14: warning: 'int kseq_read(kseq_t*)' defined but not used [-Wunused-function] static int kseq_read(kseq_t *seq) \ ^~~~~~~~~ ./kseq/kseq.h:227:3: note: in expansion of macro '__KSEQ_READ' __KSEQ_READ ^~~~~~~~~~~ ./readsReader.h:111:1: note: in expansion of macro 'KSEQ_INIT' KSEQ_INIT(gzFile, gzread) ^~~~~~~~~ libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkSABuilder.cpp -o gkSABuilder.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gkCFPSBuilder.lo gkCFPSBuilder.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkCFPSBuilder.cpp -fPIC -DPIC -o .libs/gkCFPSBuilder.o In file included from readsReader.h:109, from gkArrays.h:115, from gkCFPSBuilder.cpp:110: kseq/kseq.h:169:14: warning: 'int kseq_read(kseq_t*)' defined but not used [-Wunused-function] static int kseq_read(kseq_t *seq) \ ^~~~~~~~~ kseq/kseq.h:227:3: note: in expansion of macro '__KSEQ_READ' __KSEQ_READ ^~~~~~~~~~~ readsReader.h:111:1: note: in expansion of macro 'KSEQ_INIT' KSEQ_INIT(gzFile, gzread) ^~~~~~~~~ libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkCFPSBuilder.cpp -o gkCFPSBuilder.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gkIFABuilder.lo gkIFABuilder.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkIFABuilder.cpp -fPIC -DPIC -o .libs/gkIFABuilder.o In file included from ./readsReader.h:109, from ./gkArrays.h:115, from ./gkIFABuilder.h:107, from gkIFABuilder.cpp:105: ./kseq/kseq.h:169:14: warning: 'int kseq_read(kseq_t*)' defined but not used [-Wunused-function] static int kseq_read(kseq_t *seq) \ ^~~~~~~~~ ./kseq/kseq.h:227:3: note: in expansion of macro '__KSEQ_READ' __KSEQ_READ ^~~~~~~~~~~ ./readsReader.h:111:1: note: in expansion of macro 'KSEQ_INIT' KSEQ_INIT(gzFile, gzread) ^~~~~~~~~ libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkIFABuilder.cpp -o gkIFABuilder.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o readsReader.lo readsReader.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c readsReader.cpp -fPIC -DPIC -o .libs/readsReader.o libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c readsReader.cpp -o readsReader.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o largebinvect.lo largebinvect.cxx libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c largebinvect.cxx -fPIC -DPIC -o .libs/largebinvect.o libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c largebinvect.cxx -o largebinvect.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o bitvector.lo bitvector.cxx libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c bitvector.cxx -fPIC -DPIC -o .libs/bitvector.o libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c bitvector.cxx -o bitvector.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o rank9b.lo `test -f 'sux/rank9b.cpp' || echo './'`sux/rank9b.cpp libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c sux/rank9b.cpp -fPIC -DPIC -o .libs/rank9b.o sux/rank9b.cpp: In member function 'uint64_t rank9b::rank(uint64_t)': sux/rank9b.cpp:144:93: warning: suggest parentheses around '-' inside '>>' [-Wparentheses] return counts[ block ] + ( counts[ block + 1 ] >> ( offset + ( offset >> sizeof offset * 8 - 4 & 0x8 ) ) * 9 & 0x1FF ) + count( bits[ word ] & ( ( 1ULL << k % 64 ) - 1 ) ); ~~~~~~~~~~~~~~~~~~^~~ sux/rank9b.cpp: In member function 'uint64_t rank9b::select(uint64_t)': sux/rank9b.cpp:207:81: warning: suggest parentheses around '-' in operand of '&' [-Wparentheses] const uint64_t rank_in_word = rank_in_block - ( subcounts >> ( offset_in_block - 1 & 7 ) * 9 & 0x1FF ); ~~~~~~~~~~~~~~~~^~~ libtool: compile: arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c sux/rank9b.cpp -o rank9b.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 2:0:1 -lpthread -L/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs -lProgressBar -Wl,-z,relro -Wl,-z,now -o libGkArrays.la -rpath /usr/lib/arm-linux-gnueabi gkArrays.lo solArray.lo utils.lo gkArraysBuilder.lo gkSABuilder.lo gkCFPSBuilder.lo gkIFABuilder.lo readsReader.lo largebinvect.lo bitvector.lo rank9b.lo -lpthread -lz libtool: link: arm-linux-gnueabi-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc-cross/arm-linux-gnueabi/8/../../../../arm-linux-gnueabi/lib/crti.o /usr/lib/gcc-cross/arm-linux-gnueabi/8/crtbeginS.o .libs/gkArrays.o .libs/solArray.o .libs/utils.o .libs/gkArraysBuilder.o .libs/gkSABuilder.o .libs/gkCFPSBuilder.o .libs/gkIFABuilder.o .libs/readsReader.o .libs/largebinvect.o .libs/bitvector.o .libs/rank9b.o -Wl,-rpath -Wl,/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs -L/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs /<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs/libProgressBar.so -lpthread -lz -L/usr/lib/gcc-cross/arm-linux-gnueabi/8 -L/usr/lib/gcc-cross/arm-linux-gnueabi/8/../../../../arm-linux-gnueabi/lib -L/lib/arm-linux-gnueabi -L/usr/lib/arm-linux-gnueabi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc-cross/arm-linux-gnueabi/8/crtendS.o /usr/lib/gcc-cross/arm-linux-gnueabi/8/../../../../arm-linux-gnueabi/lib/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libGkArrays.so.1 -o .libs/libGkArrays.so.1.1.0 libtool: link: (cd ".libs" && rm -f "libGkArrays.so.1" && ln -s "libGkArrays.so.1.1.0" "libGkArrays.so.1") libtool: link: (cd ".libs" && rm -f "libGkArrays.so" && ln -s "libGkArrays.so.1.1.0" "libGkArrays.so") libtool: link: arm-linux-gnueabi-ar cru .libs/libGkArrays.a gkArrays.o solArray.o utils.o gkArraysBuilder.o gkSABuilder.o gkCFPSBuilder.o gkIFABuilder.o readsReader.o largebinvect.o bitvector.o rank9b.o arm-linux-gnueabi-ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: arm-linux-gnueabi-ranlib .libs/libGkArrays.a libtool: link: ( cd ".libs" && rm -f "libGkArrays.la" && ln -s "../libGkArrays.la" "libGkArrays.la" ) /bin/bash ../libtool --tag=CXX --mode=link arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -lGkArrays -lpthread -L/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs -lProgressBar -Wl,-z,relro -Wl,-z,now -o buildTables buildTables.o libGkArrays.la -lpthread -lz libtool: link: arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/buildTables buildTables.o /<>/libgkarrays-2.1.0+dfsg/src/.libs/libGkArrays.so -L/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs /<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs/libProgressBar.so ./.libs/libGkArrays.so -lpthread -lz make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src' make[2]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src' Making all in tests make[2]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/tests' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/tests' make[2]: Entering directory '/<>/libgkarrays-2.1.0+dfsg' cp "libGkArrays.pc" "libGkArrays-2.1.0.pc" make[2]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg' make[1]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/libgkarrays-2.1.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>/libgkarrays-2.1.0+dfsg' Making install in src make[2]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src' Making install in kseq make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/kseq' make[4]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/kseq' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libGkArrays-2.1.0/kseq' /usr/bin/install -c -m 644 kseq.h '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libGkArrays-2.1.0/kseq' make[4]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/kseq' make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/kseq' Making install in sux make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/sux' make[4]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/sux' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libGkArrays-2.1.0/sux' /usr/bin/install -c -m 644 macros.h popcount.h rank9b.h '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libGkArrays-2.1.0/sux' make[4]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/sux' make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/sux' Making install in libProgressBar-1.2.0 make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' Making install in libProgressBar make[4]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' make[5]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi' /bin/bash ../libtool --mode=install /usr/bin/install -c libProgressBar.la '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/libProgressBar.so.0.1.2 /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/libProgressBar.so.0.1.2 libtool: install: (cd /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi && { ln -s -f libProgressBar.so.0.1.2 libProgressBar.so.0 || { rm -f libProgressBar.so.0 && ln -s libProgressBar.so.0.1.2 libProgressBar.so.0; }; }) libtool: install: (cd /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi && { ln -s -f libProgressBar.so.0.1.2 libProgressBar.so || { rm -f libProgressBar.so && ln -s libProgressBar.so.0.1.2 libProgressBar.so; }; }) libtool: install: /usr/bin/install -c .libs/libProgressBar.lai /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/libProgressBar.la libtool: install: /usr/bin/install -c .libs/libProgressBar.a /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/libProgressBar.a libtool: install: chmod 644 /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/libProgressBar.a libtool: install: arm-linux-gnueabi-ranlib /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/libProgressBar.a libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabi' /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/libProgressBar-1.2.0/include' /usr/bin/install -c -m 644 config.h '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/libProgressBar-1.2.0/include' /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libProgressBar-1.2.0' /usr/bin/install -c -m 644 progressBar.h '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libProgressBar-1.2.0' make install-data-hook make[6]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' ln -s -f libProgressBar-1.2.0 /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libProgressBar make[6]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' make[5]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' make[4]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' make[4]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' make[5]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/pkgconfig' /usr/bin/install -c -m 644 libProgressBar-1.2.0.pc '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/pkgconfig' make install-data-hook make[6]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' ln -s -f libProgressBar-1.2.0.pc /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/pkgconfig/libProgressBar.pc make[6]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' make[5]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' make[4]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src' make[4]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src' /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi' /bin/bash ../libtool --mode=install /usr/bin/install -c libGkArrays.la '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi' libtool: warning: relinking 'libGkArrays.la' libtool: install: (cd /<>/libgkarrays-2.1.0+dfsg/src; /bin/bash "/<>/libgkarrays-2.1.0+dfsg/libtool" --tag CXX --mode=relink arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 2:0:1 -lpthread -L/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs -lProgressBar -Wl,-z,relro -Wl,-z,now -o libGkArrays.la -rpath /usr/lib/arm-linux-gnueabi gkArrays.lo solArray.lo utils.lo gkArraysBuilder.lo gkSABuilder.lo gkCFPSBuilder.lo gkIFABuilder.lo readsReader.lo largebinvect.lo bitvector.lo rank9b.lo -lpthread -lz -inst-prefix-dir /<>/libgkarrays-2.1.0+dfsg/debian/tmp) libtool: relink: arm-linux-gnueabi-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc-cross/arm-linux-gnueabi/8/../../../../arm-linux-gnueabi/lib/crti.o /usr/lib/gcc-cross/arm-linux-gnueabi/8/crtbeginS.o .libs/gkArrays.o .libs/solArray.o .libs/utils.o .libs/gkArraysBuilder.o .libs/gkSABuilder.o .libs/gkCFPSBuilder.o .libs/gkIFABuilder.o .libs/readsReader.o .libs/largebinvect.o .libs/bitvector.o .libs/rank9b.o -L/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs -L/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi -L/usr/lib/arm-linux-gnueabi -lProgressBar -lpthread -lz -L/usr/lib/gcc-cross/arm-linux-gnueabi/8 -L/usr/lib/gcc-cross/arm-linux-gnueabi/8/../../../../arm-linux-gnueabi/lib -L/lib/arm-linux-gnueabi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc-cross/arm-linux-gnueabi/8/crtendS.o /usr/lib/gcc-cross/arm-linux-gnueabi/8/../../../../arm-linux-gnueabi/lib/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libGkArrays.so.1 -o .libs/libGkArrays.so.1.1.0 libtool: install: /usr/bin/install -c .libs/libGkArrays.so.1.1.0T /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/libGkArrays.so.1.1.0 libtool: install: (cd /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi && { ln -s -f libGkArrays.so.1.1.0 libGkArrays.so.1 || { rm -f libGkArrays.so.1 && ln -s libGkArrays.so.1.1.0 libGkArrays.so.1; }; }) libtool: install: (cd /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi && { ln -s -f libGkArrays.so.1.1.0 libGkArrays.so || { rm -f libGkArrays.so && ln -s libGkArrays.so.1.1.0 libGkArrays.so; }; }) libtool: install: /usr/bin/install -c .libs/libGkArrays.lai /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/libGkArrays.la libtool: install: /usr/bin/install -c .libs/libGkArrays.a /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/libGkArrays.a libtool: install: chmod 644 /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/libGkArrays.a libtool: install: arm-linux-gnueabi-ranlib /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/libGkArrays.a libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabi' /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libGkArrays-2.1.0' /usr/bin/install -c -m 644 gkArrays.h solArray.h gkArraysTypes.h gkArraysBuilder.h gkSABuilder.h gkCFPSBuilder.h gkIFABuilder.h readsReader.h bitvector.hxx largebinvect.hxx bitvector.cxx largebinvect.cxx binvect.hxx '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libGkArrays-2.1.0' /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/libGkArrays-2.1.0/include' /usr/bin/install -c -m 644 /<>/libgkarrays-2.1.0+dfsg/config/config.h '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/libGkArrays-2.1.0/include' make install-data-hook make[5]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src' ln -s -f libGkArrays-2.1.0 /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libGkArrays make[5]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src' make[4]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src' make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src' make[2]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src' Making install in tests make[2]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/tests' make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/tests' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/tests' make[2]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/tests' make[2]: Entering directory '/<>/libgkarrays-2.1.0+dfsg' make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg' make[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/pkgconfig' /usr/bin/install -c -m 644 libGkArrays-2.1.0.pc '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/pkgconfig' make install-data-hook make[4]: Entering directory '/<>/libgkarrays-2.1.0+dfsg' ln -s -f libGkArrays-2.1.0.pc /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/pkgconfig/libGkArrays.pc make[4]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg' make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg' make[2]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg' make[1]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg' debian/rules override_dh_install make[1]: Entering directory '/<>/libgkarrays-2.1.0+dfsg' dh_install d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --override s/libProgressBar0-dev// \ --movedev debian/tmp/usr/include usr \ --movedev debian/tmp/usr/lib/arm-linux-gnueabi/pkgconfig usr/lib/arm-linux-gnueabi \ debian/tmp/usr/lib/arm-linux-gnueabi/libGkArrays.so Library package automatic movement utility --> zlib1g-dev package exists. set -e install -d -m 755 debian/libgkarrays-dev/usr/lib/arm-linux-gnueabi install -d -m 755 debian/libgkarrays1/usr/lib/arm-linux-gnueabi mv debian/tmp/usr/lib/arm-linux-gnueabi/libGkArrays.a debian/libgkarrays-dev/usr/lib/arm-linux-gnueabi mv debian/tmp/usr/lib/arm-linux-gnueabi/libGkArrays.so debian/libgkarrays-dev/usr/lib/arm-linux-gnueabi mv /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/libGkArrays.so.1 debian/libgkarrays1/usr/lib/arm-linux-gnueabi mv /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabi/libGkArrays.so.1.1.0 debian/libgkarrays1/usr/lib/arm-linux-gnueabi PKGDEV=libgkarrays-dev PKGSHL=libgkarrays1 install -d -m 755 debian/libgkarrays-dev/usr mv debian/tmp/usr/include debian/libgkarrays-dev/usr install -d -m 755 debian/libgkarrays-dev/usr/lib/arm-linux-gnueabi mv debian/tmp/usr/lib/arm-linux-gnueabi/pkgconfig debian/libgkarrays-dev/usr/lib/arm-linux-gnueabi # now move libProgressBar manually mv debian/tmp/usr/lib/arm-linux-gnueabi/libProgressBar.so.0* debian/libgkarrays1/usr/lib/arm-linux-gnueabi chmod -x debian/libgkarrays1/usr/lib/arm-linux-gnueabi/libProgressBar.so.0.* mv debian/tmp/usr/lib/arm-linux-gnueabi/libProgressBar.so debian/libgkarrays-dev/usr/lib/arm-linux-gnueabi mv debian/tmp/usr/lib/arm-linux-gnueabi/libProgressBar.a debian/libgkarrays-dev/usr/lib/arm-linux-gnueabi make[1]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg' dh_installdocs -a dh_installchangelogs -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libgkarrays1/usr/lib/arm-linux-gnueabi/libGkArrays.so.1.1.0 found in none of the libraries dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libgkarrays1/usr/lib/arm-linux-gnueabi/libProgressBar.so.0.1.2 found in none of the libraries dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: Depends field of package libgkarrays-dev: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: package libgkarrays-dev: substitution variable ${devlibs:Depends} unused, but is defined dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'libgkarrays1' in '../libgkarrays1_2.1.0+dfsg-2_armel.deb'. dpkg-deb: building package 'libgkarrays1-dbgsym' in '../libgkarrays1-dbgsym_2.1.0+dfsg-2_armel.deb'. dpkg-deb: building package 'libgkarrays-dev' in '../libgkarrays-dev_2.1.0+dfsg-2_armel.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../libgkarrays_2.1.0+dfsg-2_armel.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-02-27T14:34:11Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/resolver-nw7kT2/apt_archive/sbuild-build-depends-lintian-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-libgkarrays-dummy sbuild-build-depends-lintian-dummy dpkg-scanpackages: info: Wrote 4 entries to output Packages file. Ign:1 copy:/<>/resolver-nw7kT2/apt_archive ./ InRelease Get:2 copy:/<>/resolver-nw7kT2/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-nw7kT2/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-nw7kT2/apt_archive ./ Sources [765 B] Get:5 copy:/<>/resolver-nw7kT2/apt_archive ./ Packages [844 B] Fetched 2572 B in 0s (145 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libdata-dump-perl ca-certificates libhtml-template-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libunicode-utf8-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:armel t1utils 0 upgraded, 48 newly installed, 0 to remove and 0 not upgraded. Need to get 7773 kB of archives. After this operation, 20.7 MB of additional disk space will be used. Get:1 copy:/<>/resolver-nw7kT2/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 5.6 [19.4 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 7.0-5 [70.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.62-1 [33.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.2-1 [49.4 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.12-1 [509 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.27.2-1 [640 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.12-1 [862 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.34+b1 [71.2 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.40-1 [222 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.21-1+b3 [13.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.41-1+b1 [14.6 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1b-1 [1531 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 3 [6782 B] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.85-2+b1 [308 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.060-3 [207 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.18-1 [88.5 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.19-1 [372 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.39-1 [74.5 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.72-1 [262 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b5 [33.7 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-1 [101 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b4 [64.2 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libparse-debianchangelog-perl all 1.2.0-13 [59.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.76+repack-1 [33.1 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2 [90.4 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.9.1 [1193 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7773 kB in 0s (37.8 MB/s) Selecting previously unselected package netbase. (Reading database ... 17709 files and directories currently installed.) Preparing to unpack .../00-netbase_5.6_all.deb ... Unpacking netbase (5.6) ... Selecting previously unselected package readline-common. Preparing to unpack .../01-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.62-1_amd64.deb ... Unpacking diffstat (1.62-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.2-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.2-1) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../04-libreadline7_7.0-5_amd64.deb ... Unpacking libreadline7:amd64 (7.0-5) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.12-1_amd64.deb ... Unpacking gpgconf (2.2.12-1) ... Selecting previously unselected package libsqlite3-0:amd64. 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I: Lintian run was successful. +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libgkarrays_2.1.0+dfsg-2_armel.changes: --------------------------------------- Format: 1.8 Date: Tue, 17 Jul 2018 21:09:29 +0200 Source: libgkarrays Binary: libgkarrays-dev libgkarrays1 libgkarrays1-dbgsym Built-For-Profiles: cross nocheck Architecture: armel Version: 2.1.0+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: libgkarrays-dev - library to query large collection of NGS sequences (development) libgkarrays1 - library to query large collection of NGS sequences Changes: libgkarrays (2.1.0+dfsg-2) unstable; urgency=medium . * debhelper 11 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.5 Checksums-Sha1: 0c7351f4a89304e1bb22f0aac04afc98728c19a6 87364 libgkarrays-dev_2.1.0+dfsg-2_armel.deb 7dd1f2a99a34aca2a83fc291caee13e46518f287 258788 libgkarrays1-dbgsym_2.1.0+dfsg-2_armel.deb ddde7eb20840293b82cd38e9bbd166a3c3b46877 58200 libgkarrays1_2.1.0+dfsg-2_armel.deb 1de6bbaf7c108548131872fa91a58a6efb79e4c5 5248 libgkarrays_2.1.0+dfsg-2_armel.buildinfo Checksums-Sha256: 2a81720a2c437504cd837b3255fe95bf6974015291ee20950959164016c78897 87364 libgkarrays-dev_2.1.0+dfsg-2_armel.deb 8046591fa19f0adb85bdf11ddb75c327cfb4915158e5879782e979ddfcac8c75 258788 libgkarrays1-dbgsym_2.1.0+dfsg-2_armel.deb 6f25fa67a73dc81886a7c6b9a374f3d8e121c9c39ab424658164358639fc1f5a 58200 libgkarrays1_2.1.0+dfsg-2_armel.deb d6d2dd9b74fb4cd8389f7f12eba6c43ec201738181b72a2ec4ad8a6a86e3c1ee 5248 libgkarrays_2.1.0+dfsg-2_armel.buildinfo Files: afd70e659959a80fc01f1cfa19d3518e 87364 libdevel optional libgkarrays-dev_2.1.0+dfsg-2_armel.deb af6e0ff0b37e4b6543112ed62c8945e6 258788 debug optional libgkarrays1-dbgsym_2.1.0+dfsg-2_armel.deb 6a1f43adb2e0d0efd19e465653269031 58200 libs optional libgkarrays1_2.1.0+dfsg-2_armel.deb b8021fcba86209cae78c5c7887344ccc 5248 science optional libgkarrays_2.1.0+dfsg-2_armel.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: libgkarrays Binary: libgkarrays1 libgkarrays-dev Architecture: armel Version: 2.1.0+dfsg-2 Checksums-Md5: afd70e659959a80fc01f1cfa19d3518e 87364 libgkarrays-dev_2.1.0+dfsg-2_armel.deb af6e0ff0b37e4b6543112ed62c8945e6 258788 libgkarrays1-dbgsym_2.1.0+dfsg-2_armel.deb 6a1f43adb2e0d0efd19e465653269031 58200 libgkarrays1_2.1.0+dfsg-2_armel.deb Checksums-Sha1: 0c7351f4a89304e1bb22f0aac04afc98728c19a6 87364 libgkarrays-dev_2.1.0+dfsg-2_armel.deb 7dd1f2a99a34aca2a83fc291caee13e46518f287 258788 libgkarrays1-dbgsym_2.1.0+dfsg-2_armel.deb ddde7eb20840293b82cd38e9bbd166a3c3b46877 58200 libgkarrays1_2.1.0+dfsg-2_armel.deb Checksums-Sha256: 2a81720a2c437504cd837b3255fe95bf6974015291ee20950959164016c78897 87364 libgkarrays-dev_2.1.0+dfsg-2_armel.deb 8046591fa19f0adb85bdf11ddb75c327cfb4915158e5879782e979ddfcac8c75 258788 libgkarrays1-dbgsym_2.1.0+dfsg-2_armel.deb 6f25fa67a73dc81886a7c6b9a374f3d8e121c9c39ab424658164358639fc1f5a 58200 libgkarrays1_2.1.0+dfsg-2_armel.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Wed, 27 Feb 2019 14:34:11 +0000 Build-Path: /<>/libgkarrays-2.1.0+dfsg Installed-Build-Depends: adduser (= 3.118), apt (= 1.8.0~rc4), autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 10.1), base-passwd (= 3.5.46), bash (= 5.0-2), binutils (= 2.31.1-14), binutils-common (= 2.31.1-14), binutils-x86-64-linux-gnu (= 2.31.1-14), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.33.1-0.1), build-essential (= 12.5), bzip2 (= 1.0.6-9), coreutils (= 8.30-2), cpp (= 4:8.2.0-2), cpp-8 (= 8.3.0-2), d-shlibs (= 0.84), dash (= 0.5.10.2-5), debconf (= 1.5.71), debhelper (= 12.1.1), debian-archive-keyring (= 2018.1), debianutils (= 4.8.6.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.1.1-1), diffutils (= 1:3.7-2), dpkg (= 1.19.5), dpkg-dev (= 1.19.5), dwz (= 0.12-3), fdisk (= 2.33.1-0.1), file (= 1:5.35-2), findutils (= 4.6.0+git+20190209-2), g++ (= 4:8.2.0-2), g++-8 (= 8.3.0-2), gcc (= 4:8.2.0-2), gcc-8 (= 8.3.0-2), gcc-8-base (= 8.3.0-2), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), gpgv (= 2.2.12-1), grep (= 3.3-1), groff-base (= 1.22.4-2), gzip (= 1.9-3), hostname (= 3.21), init-system-helpers (= 1.56+nmu1), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.52-5), libapt-pkg5.0 (= 1.8.0~rc4), libarchive-zip-perl (= 1.64-1), libasan5 (= 8.3.0-2), libatomic1 (= 8.3.0-2), libattr1 (= 1:2.4.47-4), libaudit-common (= 1:2.8.4-2), libaudit1 (= 1:2.8.4-2), libbinutils (= 2.31.1-14), libblkid1 (= 2.33.1-0.1), libbsd0 (= 0.9.1-2), libbz2-1.0 (= 1.0.6-9), libc-bin (= 2.28-7), libc-dev-bin (= 2.28-7), libc6 (= 2.28-7), libc6-dev (= 2.28-7), libcap-ng0 (= 0.7.9-2), libcc1-0 (= 8.3.0-2), libcroco3 (= 0.6.12-3), libdb5.3 (= 5.3.28+dfsg1-0.5), libdebconfclient0 (= 0.247), libdpkg-perl (= 1.19.5), libelf1 (= 0.176-1), libfdisk1 (= 2.33.1-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.1.1-1), libgcc-8-dev (= 8.3.0-2), libgcc1 (= 1:8.3.0-2), libgcrypt20 (= 1.8.4-5), libgdbm-compat4 (= 1.18.1-3), libgdbm6 (= 1.18.1-3), libglib2.0-0 (= 2.58.3-1), libgmp10 (= 2:6.1.2+dfsg-4), libgnutls30 (= 3.6.6-2), libgomp1 (= 8.3.0-2), libgpg-error0 (= 1.35-1), libhogweed4 (= 3.4.1-1), libicu63 (= 63.1-6), libidn2-0 (= 2.0.5-1), libisl19 (= 0.20-2), libitm1 (= 8.3.0-2), liblsan0 (= 8.3.0-2), liblz4-1 (= 1.8.3-1), liblzma5 (= 5.2.4-1), libmagic-mgc (= 1:5.35-2), libmagic1 (= 1:5.35-2), libmount1 (= 2.33.1-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-2), libncurses6 (= 6.1+20181013-2), libncursesw6 (= 6.1+20181013-2), libnettle6 (= 3.4.1-1), libp11-kit0 (= 0.23.15-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre3 (= 2:8.39-11), libperl5.28 (= 5.28.1-4), libpipeline1 (= 1.5.1-2), libquadmath0 (= 8.3.0-2), libseccomp2 (= 2.3.3-4), libselinux1 (= 2.8-1+b1), libsemanage-common (= 2.8-2), libsemanage1 (= 2.8-2), libsepol1 (= 2.8-1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.33.1-0.1), libstdc++-8-dev (= 8.3.0-2), libstdc++6 (= 8.3.0-2), libsystemd0 (= 241-1), libtasn1-6 (= 4.13-3), libtinfo6 (= 6.1+20181013-2), libtool (= 2.4.6-10), libtsan0 (= 8.3.0-2), libubsan1 (= 8.3.0-2), libuchardet0 (= 0.0.6-3), libudev1 (= 241-1), libunistring2 (= 0.9.10-1), libuuid1 (= 2.33.1-0.1), libxml2 (= 2.9.4+dfsg1-7+b3), libzstd1 (= 1.3.8+dfsg-3), linux-libc-dev (= 4.19.20-1), login (= 1:4.5-1.1), m4 (= 1.4.18-2), make (= 4.2.1-1.2), man-db (= 2.8.5-2), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20181013-2), ncurses-bin (= 6.1+20181013-2), passwd (= 1:4.5-1.1), patch (= 2.7.6-3), perl (= 5.28.1-4), perl-base (= 5.28.1-4), perl-modules-5.28 (= 5.28.1-4), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.93-8), tar (= 1.30+dfsg-5), util-linux (= 2.33.1-0.1), xz-utils (= 5.2.4-1), zlib1g (= 1:1.2.11.dfsg-1), zlib1g-dev (= 1:1.2.11.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="POSIX" SOURCE_DATE_EPOCH="1531854569" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libgkarrays-dev_2.1.0+dfsg-2_armel.deb -------------------------------------- new Debian package, version 2.0. size 87364 bytes: control archive=1560 bytes. 963 bytes, 23 lines control 1982 bytes, 25 lines md5sums Package: libgkarrays-dev Source: libgkarrays Version: 2.1.0+dfsg-2 Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 463 Depends: libgkarrays1 (= 2.1.0+dfsg-2) Section: libdevel Priority: optional Homepage: http://crac.gforge.inria.fr/gkarrays/ Description: library to query large collection of NGS sequences (development) Gk-arrays are provided as a simple-to-use C++ library dedicated to queries on large collection of sequences as produced by high-throughput sequencers (e.g. HiSeq 2000 from Illumina, 454 from Roche). . Gk-arrays index k-mers of reads and allows one to answer different queries on that read collection (e.g. how many reads share this k-mer? where does this k-mer occur in the read collection?). . Gk-arrays consist of a space-efficient alternative to hash tables while being similar in terms of query times. . This is the development library for libgkarrays. drwxr-xr-x root/root 0 2018-07-17 19:09 ./ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/include/ lrwxrwxrwx root/root 0 2018-07-17 19:09 ./usr/include/libGkArrays -> libGkArrays-2.1.0 drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/ -rw-r--r-- root/root 8288 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/binvect.hxx -rw-r--r-- root/root 19920 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/bitvector.cxx -rw-r--r-- root/root 9852 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/bitvector.hxx -rw-r--r-- root/root 20802 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/gkArrays.h -rw-r--r-- root/root 8854 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/gkArraysBuilder.h -rw-r--r-- root/root 8559 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/gkArraysTypes.h -rw-r--r-- root/root 9026 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/gkCFPSBuilder.h -rw-r--r-- root/root 9283 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/gkIFABuilder.h -rw-r--r-- root/root 12439 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/gkSABuilder.h drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/kseq/ -rw-r--r-- root/root 12765 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/kseq/kseq.h -rw-r--r-- root/root 49375 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/largebinvect.cxx -rw-r--r-- root/root 14569 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/largebinvect.hxx -rw-r--r-- root/root 16651 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/readsReader.h -rw-r--r-- root/root 12355 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/solArray.h drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/sux/ -rw-r--r-- root/root 1661 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/sux/macros.h -rw-r--r-- root/root 605 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/sux/popcount.h -rw-r--r-- root/root 3115 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/sux/rank9b.h lrwxrwxrwx root/root 0 2018-07-17 19:09 ./usr/include/libProgressBar -> libProgressBar-1.2.0 drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/include/libProgressBar-1.2.0/ -rw-r--r-- root/root 8886 2018-07-17 19:09 ./usr/include/libProgressBar-1.2.0/progressBar.h drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabi/ -rw-r--r-- root/root 164294 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabi/libGkArrays.a lrwxrwxrwx root/root 0 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabi/libGkArrays.so -> libGkArrays.so.1.1.0 -rw-r--r-- root/root 13292 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabi/libProgressBar.a lrwxrwxrwx root/root 0 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabi/libProgressBar.so -> libProgressBar.so.0.1.2 drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabi/pkgconfig/ -rw-r--r-- root/root 245 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabi/pkgconfig/libGkArrays-2.1.0.pc lrwxrwxrwx root/root 0 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabi/pkgconfig/libGkArrays.pc -> libGkArrays-2.1.0.pc -rw-r--r-- root/root 259 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabi/pkgconfig/libProgressBar-1.2.0.pc lrwxrwxrwx root/root 0 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabi/pkgconfig/libProgressBar.pc -> libProgressBar-1.2.0.pc drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/share/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/share/doc/libgkarrays-dev/ -rw-r--r-- root/root 250 2018-07-17 19:09 ./usr/share/doc/libgkarrays-dev/changelog.Debian.gz -rw-r--r-- root/root 5768 2013-12-11 14:49 ./usr/share/doc/libgkarrays-dev/changelog.gz -rw-r--r-- root/root 26907 2018-07-17 19:09 ./usr/share/doc/libgkarrays-dev/copyright libgkarrays1-dbgsym_2.1.0+dfsg-2_armel.deb ------------------------------------------ new Debian package, version 2.0. size 258788 bytes: control archive=600 bytes. 440 bytes, 12 lines control 212 bytes, 2 lines md5sums Package: libgkarrays1-dbgsym Source: libgkarrays Version: 2.1.0+dfsg-2 Auto-Built-Package: debug-symbols Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 288 Depends: libgkarrays1 (= 2.1.0+dfsg-2) Section: debug Priority: optional Description: debug symbols for libgkarrays1 Build-Ids: 011aa10e06ecf87502b6a63bad97c48b9ad504b1 fd87d95041cf0ab63aa5f35aa4d805241d671fe9 drwxr-xr-x root/root 0 2018-07-17 19:09 ./ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/debug/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/debug/.build-id/01/ -rw-r--r-- root/root 274936 2018-07-17 19:09 ./usr/lib/debug/.build-id/01/1aa10e06ecf87502b6a63bad97c48b9ad504b1.debug drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/debug/.build-id/fd/ -rw-r--r-- root/root 7252 2018-07-17 19:09 ./usr/lib/debug/.build-id/fd/87d95041cf0ab63aa5f35aa4d805241d671fe9.debug drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/share/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/share/doc/ lrwxrwxrwx root/root 0 2018-07-17 19:09 ./usr/share/doc/libgkarrays1-dbgsym -> libgkarrays1 libgkarrays1_2.1.0+dfsg-2_armel.deb ----------------------------------- new Debian package, version 2.0. size 58200 bytes: control archive=1112 bytes. 936 bytes, 21 lines control 391 bytes, 5 lines md5sums 57 bytes, 2 lines shlibs 67 bytes, 2 lines triggers Package: libgkarrays1 Source: libgkarrays Version: 2.1.0+dfsg-2 Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 154 Depends: libc6 (>= 2.4), libgcc1 (>= 1:3.5), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4) Section: libs Priority: optional Homepage: http://crac.gforge.inria.fr/gkarrays/ Description: library to query large collection of NGS sequences Gk-arrays are provided as a simple-to-use C++ library dedicated to queries on large collection of sequences as produced by high-throughput sequencers (e.g. HiSeq 2000 from Illumina, 454 from Roche). . Gk-arrays index k-mers of reads and allows one to answer different queries on that read collection (e.g. how many reads share this k-mer? where does this k-mer occur in the read collection?). . Gk-arrays consist of a space-efficient alternative to hash tables while being similar in terms of query times. drwxr-xr-x root/root 0 2018-07-17 19:09 ./ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabi/ lrwxrwxrwx root/root 0 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabi/libGkArrays.so.1 -> libGkArrays.so.1.1.0 -rw-r--r-- root/root 95648 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabi/libGkArrays.so.1.1.0 lrwxrwxrwx root/root 0 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabi/libProgressBar.so.0 -> libProgressBar.so.0.1.2 -rw-r--r-- root/root 13668 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabi/libProgressBar.so.0.1.2 drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/share/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/share/doc/libgkarrays1/ -rw-r--r-- root/root 250 2018-07-17 19:09 ./usr/share/doc/libgkarrays1/changelog.Debian.gz -rw-r--r-- root/root 5768 2013-12-11 14:49 ./usr/share/doc/libgkarrays1/changelog.gz -rw-r--r-- root/root 26907 2018-07-17 19:09 ./usr/share/doc/libgkarrays1/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 18164 Build-Time: 54 Distribution: unstable Foreign Architectures: armel Host Architecture: armel Install-Time: 21 Job: libgkarrays_2.1.0+dfsg-2 Lintian: pass Machine Architecture: amd64 Package: libgkarrays Package-Time: 84 Source-Version: 2.1.0+dfsg-2 Space: 18164 Status: successful Version: 2.1.0+dfsg-2 -------------------------------------------------------------------------------- Finished at 2019-02-27T14:34:11Z Build needed 00:01:24, 18164k disk space