sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on gcc131.bak.milne.osuosl.org +==============================================================================+ | libgkarrays 2.1.0+dfsg-2 (armhf) Thu, 28 Feb 2019 20:27:28 +0000 | +==============================================================================+ Package: libgkarrays Version: 2.1.0+dfsg-2 Source Version: 2.1.0+dfsg-2 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-4687721d-625c-40b4-bfd4-eee80d25cead' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [242 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-02-28-0810.19.pdiff [3271 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-02-28-1417.00.pdiff [10.2 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-02-28-0810.19.pdiff [8430 B] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-02-28-1417.00.pdiff [83.3 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-02-28-1417.00.pdiff [10.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-02-28-1417.00.pdiff [83.3 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main armhf Packages [8113 kB] Fetched 8516 kB in 2s (4665 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: libattr1 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 20.9 kB of archives. After this operation, 3072 B of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 libattr1 amd64 1:2.4.48-1 [20.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 20.9 kB in 0s (0 B/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11913 files and directories currently installed.) Preparing to unpack .../libattr1_1%3a2.4.48-1_amd64.deb ... Unpacking libattr1:amd64 (1:2.4.48-1) over (1:2.4.47-4) ... Setting up libattr1:amd64 (1:2.4.48-1) ... Processing triggers for libc-bin (2.28-7) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'libgkarrays' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libgkarrays.git Please use: git clone https://salsa.debian.org/med-team/libgkarrays.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 111 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main libgkarrays 2.1.0+dfsg-2 (dsc) [2088 B] Get:2 http://debian.oregonstate.edu/debian unstable/main libgkarrays 2.1.0+dfsg-2 (tar) [97.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main libgkarrays 2.1.0+dfsg-2 (diff) [10.6 kB] Fetched 111 kB in 0s (0 B/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/libgkarrays-FO0keD/libgkarrays-2.1.0+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/libgkarrays-FO0keD' with '<>' +------------------------------------------------------------------------------+ | Install crossbuild-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64 Filtered Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64 dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-P3Y1ha/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-P3Y1ha/apt_archive ./ InRelease Get:2 copy:/<>/resolver-P3Y1ha/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-P3Y1ha/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-P3Y1ha/apt_archive ./ Sources [363 B] Get:5 copy:/<>/resolver-P3Y1ha/apt_archive ./ Packages [451 B] Fetched 1771 B in 0s (0 B/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils-arm-linux-gnueabihf cpp-8-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf dpkg-cross file g++-8-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf-base gcc-8-cross-base gcc-arm-linux-gnueabihf libasan5-armhf-cross libatomic1-armhf-cross libc6-armhf-cross libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-armhf-cross libgcc1-armhf-cross libgomp1-armhf-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-armhf-cross libstdc++6-armhf-cross libubsan1-armhf-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-armhf-cross sensible-utils ucf Suggested packages: binutils-doc gcc-8-locales cpp-doc binutils-multiarch gcc-8-doc libstdc++6-8-dbg-armhf-cross libgcc1-dbg-armhf-cross libgomp1-dbg-armhf-cross libitm1-dbg-armhf-cross libatomic1-dbg-armhf-cross libasan5-dbg-armhf-cross liblsan0-dbg-armhf-cross libtsan0-dbg-armhf-cross libubsan1-dbg-armhf-cross libmpx2-dbg-armhf-cross libquadmath0-dbg-armhf-cross manpages-dev autoconf automake libtool flex bison gdb-arm-linux-gnueabihf gcc-doc libyaml-shell-perl Recommended packages: libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl The following NEW packages will be installed: binutils-arm-linux-gnueabihf cpp-8-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf dpkg-cross file g++-8-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf-base gcc-8-cross-base gcc-arm-linux-gnueabihf libasan5-armhf-cross libatomic1-armhf-cross libc6-armhf-cross libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-armhf-cross libgcc1-armhf-cross libgomp1-armhf-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-armhf-cross libstdc++6-armhf-cross libubsan1-armhf-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-armhf-cross sbuild-build-depends-core-dummy:armhf sensible-utils ucf 0 upgraded, 44 newly installed, 0 to remove and 0 not upgraded. Need to get 41.8 MB of archives. After this operation, 152 MB of additional disk space will be used. Get:1 copy:/<>/resolver-P3Y1ha/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [872 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.35-2 [242 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.35-2 [117 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.35-2 [66.1 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabihf amd64 2.31.1-14 [2831 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-arm-linux-gnueabihf-base amd64 8.3.0-2cross1 [190 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-8-arm-linux-gnueabihf amd64 8.3.0-2cross1 [6554 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabihf amd64 4:8.2.0-2 [16.4 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-2 [39.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-cross-base all 8.3.0-2cross1 [185 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armhf-cross all 2.28-7cross1 [1170 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-armhf-cross all 1:8.3.0-2cross1 [37.1 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armhf-cross all 8.3.0-2cross1 [63.1 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armhf-cross all 8.3.0-2cross1 [6580 B] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armhf-cross all 8.3.0-2cross1 [301 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-armhf-cross all 8.3.0-2cross1 [330 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armhf-cross all 8.3.0-2cross1 [103 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-8-dev-armhf-cross all 8.3.0-2cross1 [612 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-arm-linux-gnueabihf amd64 8.3.0-2cross1 [6974 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabihf amd64 4:8.2.0-2 [1456 B] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armhf-cross all 4.19.20-1cross1 [1212 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armhf-cross all 2.28-7cross1 [2148 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-8-dev-armhf-cross all 8.3.0-2cross1 [1556 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 g++-8-arm-linux-gnueabihf amd64 8.3.0-2cross1 [7133 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabihf amd64 4:8.2.0-2 [1180 B] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.1-6 [8292 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.00+dfsg-1 [58.6 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1 [344 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.27-1 [66.8 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-2 [38.5 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-2 [49.3 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armhf all 12.5 [6544 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 41.8 MB in 1s (58.7 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11914 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-3+b4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-3+b4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.35-2_amd64.deb ... Unpacking libmagic-mgc (1:5.35-2) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.35-2_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-2) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.35-2_amd64.deb ... Unpacking file (1:5.35-2) ... Selecting previously unselected package ucf. Preparing to unpack .../05-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package binutils-arm-linux-gnueabihf. Preparing to unpack .../06-binutils-arm-linux-gnueabihf_2.31.1-14_amd64.deb ... Unpacking binutils-arm-linux-gnueabihf (2.31.1-14) ... Selecting previously unselected package gcc-8-arm-linux-gnueabihf-base:amd64. Preparing to unpack .../07-gcc-8-arm-linux-gnueabihf-base_8.3.0-2cross1_amd64.deb ... Unpacking gcc-8-arm-linux-gnueabihf-base:amd64 (8.3.0-2cross1) ... Selecting previously unselected package cpp-8-arm-linux-gnueabihf. Preparing to unpack .../08-cpp-8-arm-linux-gnueabihf_8.3.0-2cross1_amd64.deb ... Unpacking cpp-8-arm-linux-gnueabihf (8.3.0-2cross1) ... Selecting previously unselected package cpp-arm-linux-gnueabihf. Preparing to unpack .../09-cpp-arm-linux-gnueabihf_4%3a8.2.0-2_amd64.deb ... Unpacking cpp-arm-linux-gnueabihf (4:8.2.0-2) ... Selecting previously unselected package cross-config. Preparing to unpack .../10-cross-config_2.6.15-2_all.deb ... Unpacking cross-config (2.6.15-2) ... Selecting previously unselected package gcc-8-cross-base. Preparing to unpack .../11-gcc-8-cross-base_8.3.0-2cross1_all.deb ... Unpacking gcc-8-cross-base (8.3.0-2cross1) ... Selecting previously unselected package libc6-armhf-cross. Preparing to unpack .../12-libc6-armhf-cross_2.28-7cross1_all.deb ... Unpacking libc6-armhf-cross (2.28-7cross1) ... Selecting previously unselected package libgcc1-armhf-cross. Preparing to unpack .../13-libgcc1-armhf-cross_1%3a8.3.0-2cross1_all.deb ... Unpacking libgcc1-armhf-cross (1:8.3.0-2cross1) ... Selecting previously unselected package libgomp1-armhf-cross. Preparing to unpack .../14-libgomp1-armhf-cross_8.3.0-2cross1_all.deb ... Unpacking libgomp1-armhf-cross (8.3.0-2cross1) ... Selecting previously unselected package libatomic1-armhf-cross. Preparing to unpack .../15-libatomic1-armhf-cross_8.3.0-2cross1_all.deb ... Unpacking libatomic1-armhf-cross (8.3.0-2cross1) ... Selecting previously unselected package libstdc++6-armhf-cross. Preparing to unpack .../16-libstdc++6-armhf-cross_8.3.0-2cross1_all.deb ... Unpacking libstdc++6-armhf-cross (8.3.0-2cross1) ... Selecting previously unselected package libasan5-armhf-cross. Preparing to unpack .../17-libasan5-armhf-cross_8.3.0-2cross1_all.deb ... Unpacking libasan5-armhf-cross (8.3.0-2cross1) ... Selecting previously unselected package libubsan1-armhf-cross. Preparing to unpack .../18-libubsan1-armhf-cross_8.3.0-2cross1_all.deb ... Unpacking libubsan1-armhf-cross (8.3.0-2cross1) ... Selecting previously unselected package libgcc-8-dev-armhf-cross. Preparing to unpack .../19-libgcc-8-dev-armhf-cross_8.3.0-2cross1_all.deb ... Unpacking libgcc-8-dev-armhf-cross (8.3.0-2cross1) ... Selecting previously unselected package gcc-8-arm-linux-gnueabihf. Preparing to unpack .../20-gcc-8-arm-linux-gnueabihf_8.3.0-2cross1_amd64.deb ... Unpacking gcc-8-arm-linux-gnueabihf (8.3.0-2cross1) ... Selecting previously unselected package gcc-arm-linux-gnueabihf. Preparing to unpack .../21-gcc-arm-linux-gnueabihf_4%3a8.2.0-2_amd64.deb ... Unpacking gcc-arm-linux-gnueabihf (4:8.2.0-2) ... Selecting previously unselected package linux-libc-dev-armhf-cross. Preparing to unpack .../22-linux-libc-dev-armhf-cross_4.19.20-1cross1_all.deb ... Unpacking linux-libc-dev-armhf-cross (4.19.20-1cross1) ... Selecting previously unselected package libc6-dev-armhf-cross. Preparing to unpack .../23-libc6-dev-armhf-cross_2.28-7cross1_all.deb ... Unpacking libc6-dev-armhf-cross (2.28-7cross1) ... Selecting previously unselected package libstdc++-8-dev-armhf-cross. Preparing to unpack .../24-libstdc++-8-dev-armhf-cross_8.3.0-2cross1_all.deb ... Unpacking libstdc++-8-dev-armhf-cross (8.3.0-2cross1) ... Selecting previously unselected package g++-8-arm-linux-gnueabihf. Preparing to unpack .../25-g++-8-arm-linux-gnueabihf_8.3.0-2cross1_amd64.deb ... Unpacking g++-8-arm-linux-gnueabihf (8.3.0-2cross1) ... Selecting previously unselected package g++-arm-linux-gnueabihf. Preparing to unpack .../26-g++-arm-linux-gnueabihf_4%3a8.2.0-2_amd64.deb ... Unpacking g++-arm-linux-gnueabihf (4:8.2.0-2) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../27-libconfig-inifiles-perl_3.000001-1_all.deb ... Unpacking libconfig-inifiles-perl (3.000001-1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../28-libio-string-perl_1.08-3_all.deb ... Unpacking libio-string-perl (1.08-3) ... Selecting previously unselected package libicu63:amd64. Preparing to unpack .../29-libicu63_63.1-6_amd64.deb ... Unpacking libicu63:amd64 (63.1-6) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../30-libxml2_2.9.4+dfsg1-7+b3_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../31-libxml-namespacesupport-perl_1.12-1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../32-libxml-sax-base-perl_1.09-1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../33-libxml-sax-perl_1.00+dfsg-1_all.deb ... Unpacking libxml-sax-perl (1.00+dfsg-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../34-libxml-libxml-perl_2.0134+dfsg-1_amd64.deb ... Unpacking libxml-libxml-perl (2.0134+dfsg-1) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../35-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../36-libyaml-perl_1.27-1_all.deb ... Unpacking libyaml-perl (1.27-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../37-libconfig-auto-perl_0.44-1_all.deb ... Unpacking libconfig-auto-perl (0.44-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../38-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../39-libfile-homedir-perl_1.004-1_all.deb ... Unpacking libfile-homedir-perl (1.004-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../40-libdebian-dpkgcross-perl_2.6.15-2_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-2) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../41-dpkg-cross_2.6.15-2_all.deb ... Unpacking dpkg-cross (2.6.15-2) ... Selecting previously unselected package crossbuild-essential-armhf. Preparing to unpack .../42-crossbuild-essential-armhf_12.5_all.deb ... Unpacking crossbuild-essential-armhf (12.5) ... Selecting previously unselected package sbuild-build-depends-core-dummy:armhf. Preparing to unpack .../43-sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy:armhf (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libfile-which-perl (1.23-1) ... Setting up libc6-armhf-cross (2.28-7cross1) ... Setting up libmagic-mgc (1:5.35-2) ... Setting up gcc-8-cross-base (8.3.0-2cross1) ... Setting up libmagic1:amd64 (1:5.35-2) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up file (1:5.35-2) ... Setting up libatomic1-armhf-cross (8.3.0-2cross1) ... Setting up libyaml-perl (1.27-1) ... Setting up libicu63:amd64 (63.1-6) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cross-config (2.6.15-2) ... Setting up libgcc1-armhf-cross (1:8.3.0-2cross1) ... Setting up gcc-8-arm-linux-gnueabihf-base:amd64 (8.3.0-2cross1) ... Setting up linux-libc-dev-armhf-cross (4.19.20-1cross1) ... Setting up sensible-utils (0.0.12) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up binutils-arm-linux-gnueabihf (2.31.1-14) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up cpp-8-arm-linux-gnueabihf (8.3.0-2cross1) ... Setting up libgomp1-armhf-cross (8.3.0-2cross1) ... Setting up libc6-dev-armhf-cross (2.28-7cross1) ... Setting up libstdc++6-armhf-cross (8.3.0-2cross1) ... Setting up libubsan1-armhf-cross (8.3.0-2cross1) ... Setting up ucf (3.0038+nmu1) ... Setting up cpp-arm-linux-gnueabihf (4:8.2.0-2) ... Setting up libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libasan5-armhf-cross (8.3.0-2cross1) ... Setting up libgcc-8-dev-armhf-cross (8.3.0-2cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++-8-dev-armhf-cross (8.3.0-2cross1) ... Setting up gcc-8-arm-linux-gnueabihf (8.3.0-2cross1) ... Setting up gcc-arm-linux-gnueabihf (4:8.2.0-2) ... Setting up g++-8-arm-linux-gnueabihf (8.3.0-2cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-arm-linux-gnueabihf (4:8.2.0-2) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-2) ... Setting up dpkg-cross (2.6.15-2) ... Setting up crossbuild-essential-armhf (12.5) ... Setting up sbuild-build-depends-core-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.28-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) Setup apt archive ----------------- dpkg-deb: building package 'sbuild-build-depends-essential-dummy' in '/<>/resolver-P3Y1ha/apt_archive/sbuild-build-depends-essential-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-P3Y1ha/apt_archive ./ InRelease Get:2 copy:/<>/resolver-P3Y1ha/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-P3Y1ha/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-P3Y1ha/apt_archive ./ Sources [485 B] Get:5 copy:/<>/resolver-P3Y1ha/apt_archive ./ Packages [568 B] Fetched 2016 B in 0s (138 kB/s) Reading package lists... Reading package lists... Install essential build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-essential-dummy:armhf 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 840 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-P3Y1ha/apt_archive ./ sbuild-build-depends-essential-dummy 0.invalid.0 [840 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 840 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-essential-dummy:armhf. (Reading database ... 14960 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-essential-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-essential-dummy:armhf (0.invalid.0) ... Setting up sbuild-build-depends-essential-dummy:armhf (0.invalid.0) ... +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), d-shlibs, zlib1g-dev Filtered Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), d-shlibs, zlib1g-dev dpkg-deb: building package 'sbuild-build-depends-libgkarrays-dummy' in '/<>/resolver-P3Y1ha/apt_archive/sbuild-build-depends-libgkarrays-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-libgkarrays-dummy dpkg-scanpackages: info: Wrote 3 entries to output Packages file. Ign:1 copy:/<>/resolver-P3Y1ha/apt_archive ./ InRelease Get:2 copy:/<>/resolver-P3Y1ha/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-P3Y1ha/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-P3Y1ha/apt_archive ./ Sources [651 B] Get:5 copy:/<>/resolver-P3Y1ha/apt_archive ./ Packages [731 B] Fetched 2345 B in 0s (131 kB/s) Reading package lists... Reading package lists... Install libgkarrays build dependencies (apt-based resolver) ----------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:armhf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libatomic1:armhf libbsd0 libc6:armhf libc6-dev:armhf libcroco3 libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:armhf libgcc1:armhf libglib2.0-0 libgomp1:armhf libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:armhf libstdc++6:armhf libtool libubsan1:armhf libuchardet0 linux-libc-dev:armhf m4 man-db po-debconf zlib1g:armhf zlib1g-dev:armhf Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armhf libc-l10n:armhf locales:armhf manpages-dev:armhf libstdc++-8-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:armhf libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpm2 libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:armhf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libatomic1:armhf libbsd0 libc6:armhf libc6-dev:armhf libcroco3 libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:armhf libgcc1:armhf libglib2.0-0 libgomp1:armhf libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:armhf libstdc++6:armhf libtool libubsan1:armhf libuchardet0 linux-libc-dev:armhf m4 man-db po-debconf sbuild-build-depends-libgkarrays-dummy:armhf zlib1g:armhf zlib1g-dev:armhf 0 upgraded, 43 newly installed, 0 to remove and 0 not upgraded. Need to get 18.8 MB of archives. After this operation, 79.7 MB of additional disk space will be used. Get:1 copy:/<>/resolver-P3Y1ha/apt_archive ./ sbuild-build-depends-libgkarrays-dummy 0.invalid.0 [892 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.9.1-2 [99.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-2 [917 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 d-shlibs all 0.84 [17.2 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-10 [547 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.1.1-1 [19.7 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.1.1-1 [13.0 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1 [160 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.12-3 [78.0 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.58.3-1 [1258 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20181013-2 [102 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.1.1 [1016 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main armhf gcc-8-base armhf 8.3.0-2 [190 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main armhf libgcc1 armhf 1:8.3.0-2 [37.1 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main armhf libc6 armhf 2.28-7 [2388 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++6 armhf 8.3.0-2 [337 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main armhf libasan5 armhf 8.3.0-2 [335 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main armhf libatomic1 armhf 8.3.0-2 [6752 B] Get:36 http://debian.oregonstate.edu/debian unstable/main armhf linux-libc-dev armhf 4.19.20-1 [1124 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main armhf libc6-dev armhf 2.28-7 [2150 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main armhf libgomp1 armhf 8.3.0-2 [64.7 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main armhf libubsan1 armhf 8.3.0-2 [103 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-8-dev armhf 8.3.0-2 [613 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++-8-dev armhf 8.3.0-2 [1584 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main armhf zlib1g armhf 1:1.2.11.dfsg-1 [87.9 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [207 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 18.8 MB in 0s (73.3 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 14960 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-2_amd64.deb ... Unpacking groff-base (1.22.4-2) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.19.8.1-9_amd64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../07-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../08-m4_1.4.18-2_amd64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../09-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../10-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../11-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../12-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../13-d-shlibs_0.84_all.deb ... Unpacking d-shlibs (0.84) ... Selecting previously unselected package libtool. Preparing to unpack .../14-libtool_2.4.6-10_all.deb ... Unpacking libtool (2.4.6-10) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../15-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../16-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../17-libfile-stripnondeterminism-perl_1.1.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../18-dh-strip-nondeterminism_1.1.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.1-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../19-libelf1_0.176-1_amd64.deb ... Unpacking libelf1:amd64 (0.176-1) ... Selecting previously unselected package dwz. Preparing to unpack .../20-dwz_0.12-3_amd64.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../21-libglib2.0-0_2.58.3-1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.58.3-1) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../22-libcroco3_0.6.12-3_amd64.deb ... Unpacking libcroco3:amd64 (0.6.12-3) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../23-libncurses6_6.1+20181013-2_amd64.deb ... Unpacking libncurses6:amd64 (6.1+20181013-2) ... Selecting previously unselected package gettext. Preparing to unpack .../24-gettext_0.19.8.1-9_amd64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../25-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../26-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../27-debhelper_12.1.1_all.deb ... Unpacking debhelper (12.1.1) ... Selecting previously unselected package gcc-8-base:armhf. Preparing to unpack .../28-gcc-8-base_8.3.0-2_armhf.deb ... Unpacking gcc-8-base:armhf (8.3.0-2) ... Selecting previously unselected package libgcc1:armhf. Preparing to unpack .../29-libgcc1_1%3a8.3.0-2_armhf.deb ... Unpacking libgcc1:armhf (1:8.3.0-2) ... Selecting previously unselected package libc6:armhf. Preparing to unpack .../30-libc6_2.28-7_armhf.deb ... Unpacking libc6:armhf (2.28-7) ... Selecting previously unselected package libstdc++6:armhf. Preparing to unpack .../31-libstdc++6_8.3.0-2_armhf.deb ... Unpacking libstdc++6:armhf (8.3.0-2) ... Selecting previously unselected package libasan5:armhf. Preparing to unpack .../32-libasan5_8.3.0-2_armhf.deb ... Unpacking libasan5:armhf (8.3.0-2) ... Selecting previously unselected package libatomic1:armhf. Preparing to unpack .../33-libatomic1_8.3.0-2_armhf.deb ... Unpacking libatomic1:armhf (8.3.0-2) ... Selecting previously unselected package linux-libc-dev:armhf. Preparing to unpack .../34-linux-libc-dev_4.19.20-1_armhf.deb ... Unpacking linux-libc-dev:armhf (4.19.20-1) ... Selecting previously unselected package libc6-dev:armhf. Preparing to unpack .../35-libc6-dev_2.28-7_armhf.deb ... Unpacking libc6-dev:armhf (2.28-7) ... Selecting previously unselected package libgomp1:armhf. Preparing to unpack .../36-libgomp1_8.3.0-2_armhf.deb ... Unpacking libgomp1:armhf (8.3.0-2) ... Selecting previously unselected package libubsan1:armhf. Preparing to unpack .../37-libubsan1_8.3.0-2_armhf.deb ... Unpacking libubsan1:armhf (8.3.0-2) ... Selecting previously unselected package libgcc-8-dev:armhf. Preparing to unpack .../38-libgcc-8-dev_8.3.0-2_armhf.deb ... Unpacking libgcc-8-dev:armhf (8.3.0-2) ... Selecting previously unselected package libstdc++-8-dev:armhf. Preparing to unpack .../39-libstdc++-8-dev_8.3.0-2_armhf.deb ... Unpacking libstdc++-8-dev:armhf (8.3.0-2) ... Selecting previously unselected package zlib1g:armhf. Preparing to unpack .../40-zlib1g_1%3a1.2.11.dfsg-1_armhf.deb ... Unpacking zlib1g:armhf (1:1.2.11.dfsg-1) ... Selecting previously unselected package zlib1g-dev:armhf. Preparing to unpack .../41-zlib1g-dev_1%3a1.2.11.dfsg-1_armhf.deb ... Unpacking zlib1g-dev:armhf (1:1.2.11.dfsg-1) ... Selecting previously unselected package sbuild-build-depends-libgkarrays-dummy:armhf. Preparing to unpack .../42-sbuild-build-depends-libgkarrays-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-libgkarrays-dummy:armhf (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:amd64 (2.58.3-1) ... No schema files found: doing nothing. Setting up linux-libc-dev:armhf (4.19.20-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up autotools-dev (20180224.1) ... Setting up libncurses6:amd64 (6.1+20181013-2) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up gcc-8-base:armhf (8.3.0-2) ... Setting up autopoint (0.19.8.1-9) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up d-shlibs (0.84) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libbsd0:amd64 (0.9.1-2) ... Setting up libelf1:amd64 (0.176-1) ... Setting up libfile-stripnondeterminism-perl (1.1.1-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libtool (2.4.6-10) ... Setting up m4 (1.4.18-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-2) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libc6:armhf (2.28-7) ... Setting up libc6-dev:armhf (2.28-7) ... Setting up libgcc1:armhf (1:8.3.0-2) ... Setting up zlib1g:armhf (1:1.2.11.dfsg-1) ... Setting up libgomp1:armhf (8.3.0-2) ... Setting up dh-autoreconf (19) ... Setting up libatomic1:armhf (8.3.0-2) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1) ... Setting up libstdc++6:armhf (8.3.0-2) ... Setting up debhelper (12.1.1) ... Setting up libasan5:armhf (8.3.0-2) ... Setting up libubsan1:armhf (8.3.0-2) ... Setting up dh-strip-nondeterminism (1.1.1-1) ... Setting up libgcc-8-dev:armhf (8.3.0-2) ... Setting up libstdc++-8-dev:armhf (8.3.0-2) ... Setting up sbuild-build-depends-libgkarrays-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.28-7) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.31.1-14 dpkg-dev_1.19.5 g++-8_8.3.0-2 gcc-8_8.3.0-2 libc6-dev_2.28-7 libstdc++-8-dev_8.3.0-2 libstdc++-8-dev-armhf-cross_8.3.0-2cross1 libstdc++6_8.3.0-2 libstdc++6-armhf-cross_8.3.0-2cross1 linux-libc-dev_4.19.20-1 Package versions: adduser_3.118 apt_1.8.0~rc4 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1 base-passwd_3.5.46 bash_5.0-2 binutils_2.31.1-14 binutils-arm-linux-gnueabihf_2.31.1-14 binutils-common_2.31.1-14 binutils-x86-64-linux-gnu_2.31.1-14 bsdmainutils_11.1.2+b1 bsdutils_1:2.33.1-0.1 build-essential_12.5 bzip2_1.0.6-9 coreutils_8.30-2 cpp_4:8.2.0-2 cpp-8_8.3.0-2 cpp-8-arm-linux-gnueabihf_8.3.0-2cross1 cpp-arm-linux-gnueabihf_4:8.2.0-2 cross-config_2.6.15-2 crossbuild-essential-armhf_12.5 d-shlibs_0.84 dash_0.5.10.2-5 debconf_1.5.71 debhelper_12.1.1 debian-archive-keyring_2018.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-strip-nondeterminism_1.1.1-1 diffutils_1:3.7-2 dpkg_1.19.5 dpkg-cross_2.6.15-2 dpkg-dev_1.19.5 dwz_0.12-3 e2fsprogs_1.44.5-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-2 findutils_4.6.0+git+20190209-2 g++_4:8.2.0-2 g++-8_8.3.0-2 g++-8-arm-linux-gnueabihf_8.3.0-2cross1 g++-arm-linux-gnueabihf_4:8.2.0-2 gcc_4:8.2.0-2 gcc-8_8.3.0-2 gcc-8-arm-linux-gnueabihf_8.3.0-2cross1 gcc-8-arm-linux-gnueabihf-base_8.3.0-2cross1 gcc-8-base_8.3.0-2 gcc-8-cross-base_8.3.0-2cross1 gcc-arm-linux-gnueabihf_4:8.2.0-2 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.12-1 grep_3.3-1 groff-base_1.22.4-2 gzip_1.9-3 hostname_3.21 init-system-helpers_1.56+nmu1 intltool-debian_0.35.0+20060710.5 libacl1_2.2.52-5 libapt-pkg5.0_1.8.0~rc4 libarchive-zip-perl_1.64-1 libasan5_8.3.0-2 libasan5-armhf-cross_8.3.0-2cross1 libatomic1_8.3.0-2 libatomic1-armhf-cross_8.3.0-2cross1 libattr1_1:2.4.48-1 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2 libbinutils_2.31.1-14 libblkid1_2.33.1-0.1 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9 libc-bin_2.28-7 libc-dev-bin_2.28-7 libc6_2.28-7 libc6-armhf-cross_2.28-7cross1 libc6-dev_2.28-7 libc6-dev-armhf-cross_2.28-7cross1 libcap-ng0_0.7.9-2 libcc1-0_8.3.0-2 libcom-err2_1.44.5-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.12-3 libdb5.3_5.3.28+dfsg1-0.5 libdebconfclient0_0.247 libdebian-dpkgcross-perl_2.6.15-2 libdpkg-perl_1.19.5 libelf1_0.176-1 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.1.1-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-2 libgcc-8-dev-armhf-cross_8.3.0-2cross1 libgcc1_1:8.3.0-2 libgcc1-armhf-cross_1:8.3.0-2cross1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-3 libgdbm6_1.18.1-3 libglib2.0-0_2.58.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.6-2 libgomp1_8.3.0-2 libgomp1-armhf-cross_8.3.0-2cross1 libgpg-error0_1.35-1 libhogweed4_3.4.1-1 libicu63_63.1-6 libidn2-0_2.0.5-1 libio-string-perl_1.08-3 libisl19_0.20-2 libitm1_8.3.0-2 liblocale-gettext-perl_1.07-3+b4 liblsan0_8.3.0-2 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-2 libmagic1_1:5.35-2 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-2 libncurses6_6.1+20181013-2 libncursesw6_6.1+20181013-2 libnettle6_3.4.1-1 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre3_2:8.39-11 libperl5.28_5.28.1-4 libpipeline1_1.5.1-2 libquadmath0_8.3.0-2 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libss2_1.44.5-1 libstdc++-8-dev_8.3.0-2 libstdc++-8-dev-armhf-cross_8.3.0-2cross1 libstdc++6_8.3.0-2 libstdc++6-armhf-cross_8.3.0-2cross1 libsystemd0_241-1 libtasn1-6_4.13-3 libtinfo6_6.1+20181013-2 libtool_2.4.6-10 libtsan0_8.3.0-2 libubsan1_8.3.0-2 libubsan1-armhf-cross_8.3.0-2cross1 libuchardet0_0.0.6-3 libudev1_241-1 libunistring2_0.9.10-1 libuuid1_2.33.1-0.1 libxml-libxml-perl_2.0134+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.00+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-perl_1.27-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.20-1 linux-libc-dev-armhf-cross_4.19.20-1cross1 login_1:4.5-1.1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17+b3 mount_2.33.1-0.1 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-4 perl-base_5.28.1-4 perl-modules-5.28_5.28.1-4 po-debconf_1.0.21 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-essential-dummy_0.invalid.0 sbuild-build-depends-libgkarrays-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-8 tar_1.30+dfsg-5 tzdata_2018i-1 ucf_3.0038+nmu1 util-linux_2.33.1-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Tue Jul 17 19:10:58 2018 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libgkarrays_2.1.0+dfsg-2.dsc dpkg-source: info: extracting libgkarrays in /<>/libgkarrays-2.1.0+dfsg dpkg-source: info: unpacking libgkarrays_2.1.0+dfsg.orig.tar.xz dpkg-source: info: unpacking libgkarrays_2.1.0+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying proper_soname.patch dpkg-source: info: applying fix_pkg-config.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-4687721d-625c-40b4-bfd4-eee80d25cead SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package libgkarrays dpkg-buildpackage: info: source version 2.1.0+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a aclocal: warning: couldn't open directory 'config/m4': No such file or directory aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' aclocal: warning: couldn't open directory 'm4': No such file or directory libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:32: installing './compile' configure.in:32: installing './config.guess' configure.in:32: installing './config.sub' configure.in:31: installing './install-sh' configure.in:31: installing './missing' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' doc/Makefile.am:2: warning: suffix '.texinfo' for Texinfo files is discouraged; use '.texi' instead doc/Makefile.am:2: installing 'doc/texinfo.tex' libProgressBar/Makefile.am: installing './depcomp' libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'config'. libtoolize: copying file 'config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'config/m4'. libtoolize: copying file 'config/m4/libtool.m4' libtoolize: copying file 'config/m4/ltoptions.m4' libtoolize: copying file 'config/m4/ltsugar.m4' libtoolize: copying file 'config/m4/ltversion.m4' libtoolize: copying file 'config/m4/lt~obsolete.m4' configure.ac:213: installing 'config/compile' configure.ac:231: installing 'config/config.guess' configure.ac:231: installing 'config/config.sub' configure.ac:206: installing 'config/install-sh' configure.ac:206: installing 'config/missing' doc/Makefile.am:107: installing 'config/texinfo.tex' src/Makefile.am:117: warning: source file '$(SUX_DIR)/rank9b.cpp' is in a subdirectory, src/Makefile.am:117: but option 'subdir-objects' is disabled automake: warning: possible forward-incompatibility. automake: At least a source file is in a subdirectory, but the 'subdir-objects' automake: automake option hasn't been enabled. For now, the corresponding output automake: object file(s) will be placed in the top-level directory. However, automake: this behaviour will change in future Automake versions: they will automake: unconditionally cause object files to be placed in the same subdirectory automake: of the corresponding sources. automake: You are advised to start using 'subdir-objects' option throughout your automake: project, to avoid future incompatibilities. src/Makefile.am: installing 'config/depcomp' tests/Makefile.am:125: warning: wildcard dataset/*.fa: non-POSIX variable name tests/Makefile.am:125: (probably a GNU make extension) parallel-tests: installing 'config/test-driver' dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=arm-linux-gnueabihf configure: loading site script /etc/dpkg-cross/cross-config.armhf checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for arm-linux-gnueabihf-strip... arm-linux-gnueabihf-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for arm-linux-gnueabihf-g++... arm-linux-gnueabihf-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether arm-linux-gnueabihf-g++ accepts -g... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of arm-linux-gnueabihf-g++... none checking for gawk... (cached) mawk checking for arm-linux-gnueabihf-gcc... arm-linux-gnueabihf-gcc checking whether we are using the GNU C compiler... yes checking whether arm-linux-gnueabihf-gcc accepts -g... yes checking for arm-linux-gnueabihf-gcc option to accept ISO C89... none needed checking whether arm-linux-gnueabihf-gcc understands -c and -o together... yes checking dependency style of arm-linux-gnueabihf-gcc... none checking how to run the C preprocessor... arm-linux-gnueabihf-gcc -E checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking for texi2dvi... no checking for pdftex... no checking for kpsewhich... no configure: WARNING: The 'texi2dvi' or 'pdftex' program could not be found. This isn't critical, but it means that you won't be able to create the documentation and thus to make releases. configure: WARNING: The 'texi2dvi' or 'pdftex' is missing a correct latex installation. This isn't critical, but it means that you won't be able to create the documentation and thus to make releases. checking build system type... x86_64-pc-linux-gnu checking host system type... arm-unknown-linux-gnueabihf checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by arm-linux-gnueabihf-gcc... /usr/arm-linux-gnueabihf/bin/ld checking if the linker (/usr/arm-linux-gnueabihf/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/arm-linux-gnueabihf-nm -B checking the name lister (/usr/bin/arm-linux-gnueabihf-nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/arm-linux-gnueabihf/bin/ld option to reload object files... -r checking for arm-linux-gnueabihf-objdump... arm-linux-gnueabihf-objdump checking how to recognize dependent libraries... pass_all checking for arm-linux-gnueabihf-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for arm-linux-gnueabihf-ar... arm-linux-gnueabihf-ar checking for archiver @FILE support... @ checking for arm-linux-gnueabihf-strip... (cached) arm-linux-gnueabihf-strip checking for arm-linux-gnueabihf-ranlib... arm-linux-gnueabihf-ranlib checking command to parse /usr/bin/arm-linux-gnueabihf-nm -B output from arm-linux-gnueabihf-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for arm-linux-gnueabihf-mt... no checking for mt... no checking if : is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if arm-linux-gnueabihf-gcc supports -fno-rtti -fno-exceptions... no checking for arm-linux-gnueabihf-gcc option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabihf-gcc PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabihf-gcc static flag -static works... yes checking if arm-linux-gnueabihf-gcc supports -c -o file.o... yes checking if arm-linux-gnueabihf-gcc supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabihf-gcc linker (/usr/arm-linux-gnueabihf/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... arm-linux-gnueabihf-g++ -E checking for ld used by arm-linux-gnueabihf-g++... /usr/arm-linux-gnueabihf/bin/ld checking if the linker (/usr/arm-linux-gnueabihf/bin/ld) is GNU ld... yes checking whether the arm-linux-gnueabihf-g++ linker (/usr/arm-linux-gnueabihf/bin/ld) supports shared libraries... yes checking for arm-linux-gnueabihf-g++ option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabihf-g++ PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabihf-g++ static flag -static works... yes checking if arm-linux-gnueabihf-g++ supports -c -o file.o... yes checking if arm-linux-gnueabihf-g++ supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabihf-g++ linker (/usr/arm-linux-gnueabihf/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ld used by arm-linux-gnueabihf-gcc... (cached) /usr/arm-linux-gnueabihf/bin/ld checking if the linker (/usr/arm-linux-gnueabihf/bin/ld) is GNU ld... (cached) yes checking for dpkg... /usr/bin/dpkg checking for stdint.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for inline... inline checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... (cached) yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... (cached) yes checking for gettimeofday... yes checking for memset... yes checking for select... yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for size_t... yes checking for uint8_t... yes checking for uint32_t... yes checking for uint64_t... yes checking for unsigned long long int... yes checking for gzread in -lz... yes checking for pthread_create in -lpthread... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating postinst chmod: cannot access 'prerm': No such file or directory config.status: creating prerm config.status: creating control config.status: creating libGkArrays.pc config.status: creating Makefile config.status: creating src/Makefile config.status: creating tests/Makefile config.status: creating src/sux/Makefile config.status: creating src/kseq/Makefile config.status: creating doc/Makefile config.status: creating doc/libGkArrays.3 config.status: creating doc/package.texi config.status: creating config/config.h config.status: executing depfiles commands config.status: executing libtool commands === configuring in src/libProgressBar-1.2.0 (/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0) configure: running /bin/bash ./configure --disable-option-checking '--prefix=/usr' '--build=x86_64-linux-gnu' '--includedir=${prefix}/include' '--mandir=${prefix}/share/man' '--infodir=${prefix}/share/info' '--sysconfdir=/etc' '--localstatedir=/var' '--disable-silent-rules' '--libdir=${prefix}/lib/arm-linux-gnueabihf' '--libexecdir=${prefix}/lib/arm-linux-gnueabihf' '--runstatedir=/run' '--disable-maintainer-mode' '--disable-dependency-tracking' '--host=arm-linux-gnueabihf' 'build_alias=x86_64-linux-gnu' 'host_alias=arm-linux-gnueabihf' 'CXXFLAGS=-g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security' 'LDFLAGS=-Wl,-z,relro -Wl,-z,now' 'CPPFLAGS=-Wdate-time -D_FORTIFY_SOURCE=2' 'CFLAGS=-g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security' --cache-file=/dev/null --srcdir=. configure: loading site script /etc/dpkg-cross/cross-config.armhf checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for arm-linux-gnueabihf-strip... arm-linux-gnueabihf-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking build system type... x86_64-pc-linux-gnu checking host system type... arm-unknown-linux-gnueabihf checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for arm-linux-gnueabihf-gcc... arm-linux-gnueabihf-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether arm-linux-gnueabihf-gcc accepts -g... yes checking for arm-linux-gnueabihf-gcc option to accept ISO C89... none needed checking whether arm-linux-gnueabihf-gcc understands -c and -o together... yes checking dependency style of arm-linux-gnueabihf-gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by arm-linux-gnueabihf-gcc... /usr/arm-linux-gnueabihf/bin/ld checking if the linker (/usr/arm-linux-gnueabihf/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/arm-linux-gnueabihf-nm -B checking the name lister (/usr/bin/arm-linux-gnueabihf-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/arm-linux-gnueabihf/bin/ld option to reload object files... -r checking for arm-linux-gnueabihf-objdump... arm-linux-gnueabihf-objdump checking how to recognize dependent libraries... pass_all checking for arm-linux-gnueabihf-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for arm-linux-gnueabihf-ar... arm-linux-gnueabihf-ar checking for archiver @FILE support... @ checking for arm-linux-gnueabihf-strip... (cached) arm-linux-gnueabihf-strip checking for arm-linux-gnueabihf-ranlib... arm-linux-gnueabihf-ranlib checking command to parse /usr/bin/arm-linux-gnueabihf-nm -B output from arm-linux-gnueabihf-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for arm-linux-gnueabihf-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... arm-linux-gnueabihf-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if arm-linux-gnueabihf-gcc supports -fno-rtti -fno-exceptions... no checking for arm-linux-gnueabihf-gcc option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabihf-gcc PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabihf-gcc static flag -static works... yes checking if arm-linux-gnueabihf-gcc supports -c -o file.o... yes checking if arm-linux-gnueabihf-gcc supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabihf-gcc linker (/usr/arm-linux-gnueabihf/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for arm-linux-gnueabihf-gcc... (cached) arm-linux-gnueabihf-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether arm-linux-gnueabihf-gcc accepts -g... (cached) yes checking for arm-linux-gnueabihf-gcc option to accept ISO C89... (cached) none needed checking whether arm-linux-gnueabihf-gcc understands -c and -o together... (cached) yes checking dependency style of arm-linux-gnueabihf-gcc... (cached) none checking for arm-linux-gnueabihf-g++... arm-linux-gnueabihf-g++ checking whether we are using the GNU C++ compiler... yes checking whether arm-linux-gnueabihf-g++ accepts -g... yes checking dependency style of arm-linux-gnueabihf-g++... none checking how to run the C++ preprocessor... arm-linux-gnueabihf-g++ -E checking for ld used by arm-linux-gnueabihf-g++... /usr/arm-linux-gnueabihf/bin/ld checking if the linker (/usr/arm-linux-gnueabihf/bin/ld) is GNU ld... yes checking whether the arm-linux-gnueabihf-g++ linker (/usr/arm-linux-gnueabihf/bin/ld) supports shared libraries... yes checking for arm-linux-gnueabihf-g++ option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabihf-g++ PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabihf-g++ static flag -static works... yes checking if arm-linux-gnueabihf-g++ supports -c -o file.o... yes checking if arm-linux-gnueabihf-g++ supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabihf-g++ linker (/usr/arm-linux-gnueabihf/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for dpkg... /usr/bin/dpkg checking for rpmbuild... no checking for rpm... no checking for texi2dvi... no checking for pdftex... no checking for kpsewhich... no configure: WARNING: The 'texi2dvi' or 'pdftex' program could not be found. This isn't critical, but it means that you won't be able to create the documentation and thus to make releases. configure: WARNING: The 'texi2dvi' or 'pdftex' is missing a correct latex installation. This isn't critical, but it means that you won't be able to create the documentation and thus to make releases. checking for an ANSI C-conforming const... yes checking for inline... inline checking whether sys/types.h defines makedev... no checking sys/mkdev.h usability... no checking sys/mkdev.h presence... no checking for sys/mkdev.h... no checking sys/sysmacros.h usability... yes checking sys/sysmacros.h presence... yes checking for sys/sysmacros.h... yes checking for size_t... yes checking for working alloca.h... yes checking for alloca... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for struct stat.st_blocks... yes checking whether ln -s works... yes checking for ANSI C header files... (cached) yes checking for unistd.h... (cached) yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking for sys/sysmacros.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking for memory.h... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking alloca.h usability... yes checking alloca.h presence... yes checking for alloca.h... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating postinst chmod: cannot access 'prerm': No such file or directory config.status: creating prerm config.status: creating libProgressBar.lsm config.status: creating libProgressBar.spec config.status: creating control config.status: creating libProgressBar.pc config.status: creating Makefile config.status: creating libProgressBar/Makefile config.status: creating doc/Makefile config.status: creating doc/libProgressBar.3 config.status: creating libProgressBar/config.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build -a make -j1 make[1]: Entering directory '/<>/libgkarrays-2.1.0+dfsg' Making all in src make[2]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src' Making all in kseq make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/kseq' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/kseq' Making all in sux make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/sux' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/sux' Making all in libProgressBar-1.2.0 make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' Making all in libProgressBar make[4]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' make all-am make[5]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -O6 -Wall --pedantic --ansi -c -o testPB.o testPB.cpp /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -O6 -Wall --pedantic --ansi -c -o progressBar.lo progressBar.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -O6 -Wall --pedantic --ansi -c progressBar.cpp -fPIC -DPIC -o .libs/progressBar.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -O6 -Wall --pedantic --ansi -c progressBar.cpp -o progressBar.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link arm-linux-gnueabihf-g++ -O6 -Wall --pedantic --ansi -version-info 1:2:1 -Wl,-z,relro -Wl,-z,now -o libProgressBar.la -rpath /usr/lib/arm-linux-gnueabihf progressBar.lo libtool: link: arm-linux-gnueabihf-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc-cross/arm-linux-gnueabihf/8/../../../../arm-linux-gnueabihf/lib/crti.o /usr/lib/gcc-cross/arm-linux-gnueabihf/8/crtbeginS.o .libs/progressBar.o -L/usr/lib/gcc-cross/arm-linux-gnueabihf/8 -L/usr/lib/gcc-cross/arm-linux-gnueabihf/8/../../../../arm-linux-gnueabihf/lib -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc-cross/arm-linux-gnueabihf/8/crtendS.o /usr/lib/gcc-cross/arm-linux-gnueabihf/8/../../../../arm-linux-gnueabihf/lib/crtn.o -O6 -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libProgressBar.so.0 -o .libs/libProgressBar.so.0.1.2 libtool: link: (cd ".libs" && rm -f "libProgressBar.so.0" && ln -s "libProgressBar.so.0.1.2" "libProgressBar.so.0") libtool: link: (cd ".libs" && rm -f "libProgressBar.so" && ln -s "libProgressBar.so.0.1.2" "libProgressBar.so") libtool: link: arm-linux-gnueabihf-ar cru .libs/libProgressBar.a progressBar.o arm-linux-gnueabihf-ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: arm-linux-gnueabihf-ranlib .libs/libProgressBar.a libtool: link: ( cd ".libs" && rm -f "libProgressBar.la" && ln -s "../libProgressBar.la" "libProgressBar.la" ) /bin/bash ../libtool --tag=CXX --mode=link arm-linux-gnueabihf-g++ -O6 -Wall --pedantic --ansi -lProgressBar -Wl,-z,relro -Wl,-z,now -o testProgressBar testPB.o libProgressBar.la libtool: link: arm-linux-gnueabihf-g++ -O6 -Wall --pedantic --ansi -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/testProgressBar testPB.o /<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs/libProgressBar.so ./.libs/libProgressBar.so make[5]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' make[4]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' make[4]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' cp "libProgressBar.pc" "libProgressBar-1.2.0.pc" make[4]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src' arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o buildTables.o buildTables.cpp In file included from ./readsReader.h:109, from ./gkArrays.h:115, from buildTables.cpp:111: ./kseq/kseq.h:169:14: warning: 'int kseq_read(kseq_t*)' defined but not used [-Wunused-function] static int kseq_read(kseq_t *seq) \ ^~~~~~~~~ ./kseq/kseq.h:227:3: note: in expansion of macro '__KSEQ_READ' __KSEQ_READ ^~~~~~~~~~~ ./readsReader.h:111:1: note: in expansion of macro 'KSEQ_INIT' KSEQ_INIT(gzFile, gzread) ^~~~~~~~~ /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gkArrays.lo gkArrays.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkArrays.cpp -fPIC -DPIC -o .libs/gkArrays.o In file included from readsReader.h:109, from gkArrays.h:115, from gkArrays.cpp:113: kseq/kseq.h:169:14: warning: 'int kseq_read(kseq_t*)' defined but not used [-Wunused-function] static int kseq_read(kseq_t *seq) \ ^~~~~~~~~ kseq/kseq.h:227:3: note: in expansion of macro '__KSEQ_READ' __KSEQ_READ ^~~~~~~~~~~ readsReader.h:111:1: note: in expansion of macro 'KSEQ_INIT' KSEQ_INIT(gzFile, gzread) ^~~~~~~~~ libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkArrays.cpp -o gkArrays.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o solArray.lo solArray.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c solArray.cpp -fPIC -DPIC -o .libs/solArray.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c solArray.cpp -o solArray.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utils.lo utils.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c utils.cpp -fPIC -DPIC -o .libs/utils.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c utils.cpp -o utils.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gkArraysBuilder.lo gkArraysBuilder.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkArraysBuilder.cpp -fPIC -DPIC -o .libs/gkArraysBuilder.o In file included from readsReader.h:109, from gkArrays.h:115, from gkArraysBuilder.h:105, from gkArraysBuilder.cpp:103: kseq/kseq.h:169:14: warning: 'int kseq_read(kseq_t*)' defined but not used [-Wunused-function] static int kseq_read(kseq_t *seq) \ ^~~~~~~~~ kseq/kseq.h:227:3: note: in expansion of macro '__KSEQ_READ' __KSEQ_READ ^~~~~~~~~~~ readsReader.h:111:1: note: in expansion of macro 'KSEQ_INIT' KSEQ_INIT(gzFile, gzread) ^~~~~~~~~ libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkArraysBuilder.cpp -o gkArraysBuilder.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gkSABuilder.lo gkSABuilder.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkSABuilder.cpp -fPIC -DPIC -o .libs/gkSABuilder.o gkSABuilder.cpp: In function 'int64_t gkarrays::partition(gkarrays::SolArray*, gkarrays::SolArray*, uintSA, uintSA, uintSA)': gkSABuilder.cpp:340:17: warning: suggest parentheses around '&&' within '||' [-Wparentheses] while(i <= end && values->get(i) < pivotv||((pivotv==values->get(i)) &&(pivotp>sa->get(i)))); ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from ./readsReader.h:109, from ./gkArrays.h:115, from ./gkSABuilder.h:108, from gkSABuilder.cpp:104: ./readsReader.h: At global scope: ./kseq/kseq.h:169:14: warning: 'int kseq_read(kseq_t*)' defined but not used [-Wunused-function] static int kseq_read(kseq_t *seq) \ ^~~~~~~~~ ./kseq/kseq.h:227:3: note: in expansion of macro '__KSEQ_READ' __KSEQ_READ ^~~~~~~~~~~ ./readsReader.h:111:1: note: in expansion of macro 'KSEQ_INIT' KSEQ_INIT(gzFile, gzread) ^~~~~~~~~ libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkSABuilder.cpp -o gkSABuilder.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gkCFPSBuilder.lo gkCFPSBuilder.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkCFPSBuilder.cpp -fPIC -DPIC -o .libs/gkCFPSBuilder.o In file included from readsReader.h:109, from gkArrays.h:115, from gkCFPSBuilder.cpp:110: kseq/kseq.h:169:14: warning: 'int kseq_read(kseq_t*)' defined but not used [-Wunused-function] static int kseq_read(kseq_t *seq) \ ^~~~~~~~~ kseq/kseq.h:227:3: note: in expansion of macro '__KSEQ_READ' __KSEQ_READ ^~~~~~~~~~~ readsReader.h:111:1: note: in expansion of macro 'KSEQ_INIT' KSEQ_INIT(gzFile, gzread) ^~~~~~~~~ libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkCFPSBuilder.cpp -o gkCFPSBuilder.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gkIFABuilder.lo gkIFABuilder.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkIFABuilder.cpp -fPIC -DPIC -o .libs/gkIFABuilder.o In file included from ./readsReader.h:109, from ./gkArrays.h:115, from ./gkIFABuilder.h:107, from gkIFABuilder.cpp:105: ./kseq/kseq.h:169:14: warning: 'int kseq_read(kseq_t*)' defined but not used [-Wunused-function] static int kseq_read(kseq_t *seq) \ ^~~~~~~~~ ./kseq/kseq.h:227:3: note: in expansion of macro '__KSEQ_READ' __KSEQ_READ ^~~~~~~~~~~ ./readsReader.h:111:1: note: in expansion of macro 'KSEQ_INIT' KSEQ_INIT(gzFile, gzread) ^~~~~~~~~ libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gkIFABuilder.cpp -o gkIFABuilder.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o readsReader.lo readsReader.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c readsReader.cpp -fPIC -DPIC -o .libs/readsReader.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c readsReader.cpp -o readsReader.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o largebinvect.lo largebinvect.cxx libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c largebinvect.cxx -fPIC -DPIC -o .libs/largebinvect.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c largebinvect.cxx -o largebinvect.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o bitvector.lo bitvector.cxx libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c bitvector.cxx -fPIC -DPIC -o .libs/bitvector.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c bitvector.cxx -o bitvector.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o rank9b.lo `test -f 'sux/rank9b.cpp' || echo './'`sux/rank9b.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c sux/rank9b.cpp -fPIC -DPIC -o .libs/rank9b.o sux/rank9b.cpp: In member function 'uint64_t rank9b::rank(uint64_t)': sux/rank9b.cpp:144:93: warning: suggest parentheses around '-' inside '>>' [-Wparentheses] return counts[ block ] + ( counts[ block + 1 ] >> ( offset + ( offset >> sizeof offset * 8 - 4 & 0x8 ) ) * 9 & 0x1FF ) + count( bits[ word ] & ( ( 1ULL << k % 64 ) - 1 ) ); ~~~~~~~~~~~~~~~~~~^~~ sux/rank9b.cpp: In member function 'uint64_t rank9b::select(uint64_t)': sux/rank9b.cpp:207:81: warning: suggest parentheses around '-' in operand of '&' [-Wparentheses] const uint64_t rank_in_word = rank_in_block - ( subcounts >> ( offset_in_block - 1 & 7 ) * 9 & 0x1FF ); ~~~~~~~~~~~~~~~~^~~ libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I../config -I/<>/libgkarrays-2.1.0+dfsg -I/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -ansi -funroll-loops -O4 -DNDEBUG -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c sux/rank9b.cpp -o rank9b.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link arm-linux-gnueabihf-g++ -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 2:0:1 -lpthread -L/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs -lProgressBar -Wl,-z,relro -Wl,-z,now -o libGkArrays.la -rpath /usr/lib/arm-linux-gnueabihf gkArrays.lo solArray.lo utils.lo gkArraysBuilder.lo gkSABuilder.lo gkCFPSBuilder.lo gkIFABuilder.lo readsReader.lo largebinvect.lo bitvector.lo rank9b.lo -lpthread -lz libtool: link: arm-linux-gnueabihf-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc-cross/arm-linux-gnueabihf/8/../../../../arm-linux-gnueabihf/lib/crti.o /usr/lib/gcc-cross/arm-linux-gnueabihf/8/crtbeginS.o .libs/gkArrays.o .libs/solArray.o .libs/utils.o .libs/gkArraysBuilder.o .libs/gkSABuilder.o .libs/gkCFPSBuilder.o .libs/gkIFABuilder.o .libs/readsReader.o .libs/largebinvect.o .libs/bitvector.o .libs/rank9b.o -Wl,-rpath -Wl,/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs -L/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs /<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs/libProgressBar.so -lpthread -lz -L/usr/lib/gcc-cross/arm-linux-gnueabihf/8 -L/usr/lib/gcc-cross/arm-linux-gnueabihf/8/../../../../arm-linux-gnueabihf/lib -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc-cross/arm-linux-gnueabihf/8/crtendS.o /usr/lib/gcc-cross/arm-linux-gnueabihf/8/../../../../arm-linux-gnueabihf/lib/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libGkArrays.so.1 -o .libs/libGkArrays.so.1.1.0 libtool: link: (cd ".libs" && rm -f "libGkArrays.so.1" && ln -s "libGkArrays.so.1.1.0" "libGkArrays.so.1") libtool: link: (cd ".libs" && rm -f "libGkArrays.so" && ln -s "libGkArrays.so.1.1.0" "libGkArrays.so") libtool: link: arm-linux-gnueabihf-ar cru .libs/libGkArrays.a gkArrays.o solArray.o utils.o gkArraysBuilder.o gkSABuilder.o gkCFPSBuilder.o gkIFABuilder.o readsReader.o largebinvect.o bitvector.o rank9b.o arm-linux-gnueabihf-ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: arm-linux-gnueabihf-ranlib .libs/libGkArrays.a libtool: link: ( cd ".libs" && rm -f "libGkArrays.la" && ln -s "../libGkArrays.la" "libGkArrays.la" ) /bin/bash ../libtool --tag=CXX --mode=link arm-linux-gnueabihf-g++ -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -lGkArrays -lpthread -L/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs -lProgressBar -Wl,-z,relro -Wl,-z,now -o buildTables buildTables.o libGkArrays.la -lpthread -lz libtool: link: arm-linux-gnueabihf-g++ -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/buildTables buildTables.o /<>/libgkarrays-2.1.0+dfsg/src/.libs/libGkArrays.so -L/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs /<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs/libProgressBar.so ./.libs/libGkArrays.so -lpthread -lz make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src' make[2]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src' Making all in tests make[2]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/tests' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/tests' make[2]: Entering directory '/<>/libgkarrays-2.1.0+dfsg' cp "libGkArrays.pc" "libGkArrays-2.1.0.pc" make[2]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg' make[1]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/libgkarrays-2.1.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>/libgkarrays-2.1.0+dfsg' Making install in src make[2]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src' Making install in kseq make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/kseq' make[4]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/kseq' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libGkArrays-2.1.0/kseq' /usr/bin/install -c -m 644 kseq.h '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libGkArrays-2.1.0/kseq' make[4]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/kseq' make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/kseq' Making install in sux make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/sux' make[4]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/sux' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libGkArrays-2.1.0/sux' /usr/bin/install -c -m 644 macros.h popcount.h rank9b.h '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libGkArrays-2.1.0/sux' make[4]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/sux' make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/sux' Making install in libProgressBar-1.2.0 make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' Making install in libProgressBar make[4]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' make[5]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf' /bin/bash ../libtool --mode=install /usr/bin/install -c libProgressBar.la '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/libProgressBar.so.0.1.2 /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libProgressBar.so.0.1.2 libtool: install: (cd /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libProgressBar.so.0.1.2 libProgressBar.so.0 || { rm -f libProgressBar.so.0 && ln -s libProgressBar.so.0.1.2 libProgressBar.so.0; }; }) libtool: install: (cd /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libProgressBar.so.0.1.2 libProgressBar.so || { rm -f libProgressBar.so && ln -s libProgressBar.so.0.1.2 libProgressBar.so; }; }) libtool: install: /usr/bin/install -c .libs/libProgressBar.lai /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libProgressBar.la libtool: install: /usr/bin/install -c .libs/libProgressBar.a /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libProgressBar.a libtool: install: chmod 644 /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libProgressBar.a libtool: install: arm-linux-gnueabihf-ranlib /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libProgressBar.a libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf' /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libProgressBar-1.2.0/include' /usr/bin/install -c -m 644 config.h '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libProgressBar-1.2.0/include' /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libProgressBar-1.2.0' /usr/bin/install -c -m 644 progressBar.h '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libProgressBar-1.2.0' make install-data-hook make[6]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' ln -s -f libProgressBar-1.2.0 /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libProgressBar make[6]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' make[5]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' make[4]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar' make[4]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' make[5]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig' /usr/bin/install -c -m 644 libProgressBar-1.2.0.pc '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig' make install-data-hook make[6]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' ln -s -f libProgressBar-1.2.0.pc /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig/libProgressBar.pc make[6]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' make[5]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' make[4]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0' make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src' make[4]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src' /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf' /bin/bash ../libtool --mode=install /usr/bin/install -c libGkArrays.la '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf' libtool: warning: relinking 'libGkArrays.la' libtool: install: (cd /<>/libgkarrays-2.1.0+dfsg/src; /bin/bash "/<>/libgkarrays-2.1.0+dfsg/libtool" --tag CXX --mode=relink arm-linux-gnueabihf-g++ -g -O2 -fdebug-prefix-map=/<>/libgkarrays-2.1.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 2:0:1 -lpthread -L/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs -lProgressBar -Wl,-z,relro -Wl,-z,now -o libGkArrays.la -rpath /usr/lib/arm-linux-gnueabihf gkArrays.lo solArray.lo utils.lo gkArraysBuilder.lo gkSABuilder.lo gkCFPSBuilder.lo gkIFABuilder.lo readsReader.lo largebinvect.lo bitvector.lo rank9b.lo -lpthread -lz -inst-prefix-dir /<>/libgkarrays-2.1.0+dfsg/debian/tmp) libtool: relink: arm-linux-gnueabihf-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc-cross/arm-linux-gnueabihf/8/../../../../arm-linux-gnueabihf/lib/crti.o /usr/lib/gcc-cross/arm-linux-gnueabihf/8/crtbeginS.o .libs/gkArrays.o .libs/solArray.o .libs/utils.o .libs/gkArraysBuilder.o .libs/gkSABuilder.o .libs/gkCFPSBuilder.o .libs/gkIFABuilder.o .libs/readsReader.o .libs/largebinvect.o .libs/bitvector.o .libs/rank9b.o -L/<>/libgkarrays-2.1.0+dfsg/src/libProgressBar-1.2.0/libProgressBar/.libs -L/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lProgressBar -lpthread -lz -L/usr/lib/gcc-cross/arm-linux-gnueabihf/8 -L/usr/lib/gcc-cross/arm-linux-gnueabihf/8/../../../../arm-linux-gnueabihf/lib -L/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc-cross/arm-linux-gnueabihf/8/crtendS.o /usr/lib/gcc-cross/arm-linux-gnueabihf/8/../../../../arm-linux-gnueabihf/lib/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libGkArrays.so.1 -o .libs/libGkArrays.so.1.1.0 libtool: install: /usr/bin/install -c .libs/libGkArrays.so.1.1.0T /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libGkArrays.so.1.1.0 libtool: install: (cd /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libGkArrays.so.1.1.0 libGkArrays.so.1 || { rm -f libGkArrays.so.1 && ln -s libGkArrays.so.1.1.0 libGkArrays.so.1; }; }) libtool: install: (cd /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libGkArrays.so.1.1.0 libGkArrays.so || { rm -f libGkArrays.so && ln -s libGkArrays.so.1.1.0 libGkArrays.so; }; }) libtool: install: /usr/bin/install -c .libs/libGkArrays.lai /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libGkArrays.la libtool: install: /usr/bin/install -c .libs/libGkArrays.a /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libGkArrays.a libtool: install: chmod 644 /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libGkArrays.a libtool: install: arm-linux-gnueabihf-ranlib /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libGkArrays.a libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf' /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libGkArrays-2.1.0' /usr/bin/install -c -m 644 gkArrays.h solArray.h gkArraysTypes.h gkArraysBuilder.h gkSABuilder.h gkCFPSBuilder.h gkIFABuilder.h readsReader.h bitvector.hxx largebinvect.hxx bitvector.cxx largebinvect.cxx binvect.hxx '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libGkArrays-2.1.0' /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libGkArrays-2.1.0/include' /usr/bin/install -c -m 644 /<>/libgkarrays-2.1.0+dfsg/config/config.h '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libGkArrays-2.1.0/include' make install-data-hook make[5]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/src' ln -s -f libGkArrays-2.1.0 /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/include/libGkArrays make[5]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src' make[4]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src' make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src' make[2]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/src' Making install in tests make[2]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/tests' make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg/tests' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/tests' make[2]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg/tests' make[2]: Entering directory '/<>/libgkarrays-2.1.0+dfsg' make[3]: Entering directory '/<>/libgkarrays-2.1.0+dfsg' make[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig' /usr/bin/install -c -m 644 libGkArrays-2.1.0.pc '/<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig' make install-data-hook make[4]: Entering directory '/<>/libgkarrays-2.1.0+dfsg' ln -s -f libGkArrays-2.1.0.pc /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig/libGkArrays.pc make[4]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg' make[3]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg' make[2]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg' make[1]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg' debian/rules override_dh_install make[1]: Entering directory '/<>/libgkarrays-2.1.0+dfsg' dh_install d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --override s/libProgressBar0-dev// \ --movedev debian/tmp/usr/include usr \ --movedev debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig usr/lib/arm-linux-gnueabihf \ debian/tmp/usr/lib/arm-linux-gnueabihf/libGkArrays.so Library package automatic movement utility --> zlib1g-dev package exists. set -e install -d -m 755 debian/libgkarrays-dev/usr/lib/arm-linux-gnueabihf install -d -m 755 debian/libgkarrays1/usr/lib/arm-linux-gnueabihf mv debian/tmp/usr/lib/arm-linux-gnueabihf/libGkArrays.a debian/libgkarrays-dev/usr/lib/arm-linux-gnueabihf mv debian/tmp/usr/lib/arm-linux-gnueabihf/libGkArrays.so debian/libgkarrays-dev/usr/lib/arm-linux-gnueabihf mv /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libGkArrays.so.1 debian/libgkarrays1/usr/lib/arm-linux-gnueabihf mv /<>/libgkarrays-2.1.0+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libGkArrays.so.1.1.0 debian/libgkarrays1/usr/lib/arm-linux-gnueabihf PKGDEV=libgkarrays-dev PKGSHL=libgkarrays1 install -d -m 755 debian/libgkarrays-dev/usr mv debian/tmp/usr/include debian/libgkarrays-dev/usr install -d -m 755 debian/libgkarrays-dev/usr/lib/arm-linux-gnueabihf mv debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig debian/libgkarrays-dev/usr/lib/arm-linux-gnueabihf # now move libProgressBar manually mv debian/tmp/usr/lib/arm-linux-gnueabihf/libProgressBar.so.0* debian/libgkarrays1/usr/lib/arm-linux-gnueabihf chmod -x debian/libgkarrays1/usr/lib/arm-linux-gnueabihf/libProgressBar.so.0.* mv debian/tmp/usr/lib/arm-linux-gnueabihf/libProgressBar.so debian/libgkarrays-dev/usr/lib/arm-linux-gnueabihf mv debian/tmp/usr/lib/arm-linux-gnueabihf/libProgressBar.a debian/libgkarrays-dev/usr/lib/arm-linux-gnueabihf make[1]: Leaving directory '/<>/libgkarrays-2.1.0+dfsg' dh_installdocs -a dh_installchangelogs -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libgkarrays1/usr/lib/arm-linux-gnueabihf/libGkArrays.so.1.1.0 found in none of the libraries dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libgkarrays1/usr/lib/arm-linux-gnueabihf/libProgressBar.so.0.1.2 found in none of the libraries dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: Depends field of package libgkarrays-dev: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: package libgkarrays-dev: substitution variable ${devlibs:Depends} unused, but is defined dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'libgkarrays1' in '../libgkarrays1_2.1.0+dfsg-2_armhf.deb'. dpkg-deb: building package 'libgkarrays1-dbgsym' in '../libgkarrays1-dbgsym_2.1.0+dfsg-2_armhf.deb'. dpkg-deb: building package 'libgkarrays-dev' in '../libgkarrays-dev_2.1.0+dfsg-2_armhf.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../libgkarrays_2.1.0+dfsg-2_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-02-28T20:28:54Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/resolver-P3Y1ha/apt_archive/sbuild-build-depends-lintian-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-libgkarrays-dummy sbuild-build-depends-lintian-dummy dpkg-scanpackages: info: Wrote 4 entries to output Packages file. Ign:1 copy:/<>/resolver-P3Y1ha/apt_archive ./ InRelease Get:2 copy:/<>/resolver-P3Y1ha/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-P3Y1ha/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-P3Y1ha/apt_archive ./ Sources [771 B] Get:5 copy:/<>/resolver-P3Y1ha/apt_archive ./ Packages [843 B] Fetched 2577 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libdata-dump-perl ca-certificates libhtml-template-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libunicode-utf8-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:armhf t1utils 0 upgraded, 48 newly installed, 0 to remove and 0 not upgraded. Need to get 7773 kB of archives. After this operation, 20.7 MB of additional disk space will be used. Get:1 copy:/<>/resolver-P3Y1ha/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 5.6 [19.4 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 7.0-5 [70.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.62-1 [33.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.2-1 [49.4 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.12-1 [509 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.27.2-1 [640 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.12-1 [862 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.34+b1 [71.2 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.40-1 [222 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.21-1+b3 [13.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.41-1+b1 [14.6 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1b-1 [1531 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 3 [6782 B] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.85-2+b1 [308 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.060-3 [207 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.18-1 [88.5 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.19-1 [372 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.39-1 [74.5 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.72-1 [262 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b5 [33.7 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-1 [101 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b4 [64.2 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libparse-debianchangelog-perl all 1.2.0-13 [59.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.76+repack-1 [33.1 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2 [90.4 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.9.1 [1193 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7773 kB in 0s (49.0 MB/s) Selecting previously unselected package netbase. (Reading database ... 17712 files and directories currently installed.) Preparing to unpack .../00-netbase_5.6_all.deb ... Unpacking netbase (5.6) ... Selecting previously unselected package readline-common. Preparing to unpack .../01-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.62-1_amd64.deb ... Unpacking diffstat (1.62-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.2-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.2-1) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../04-libreadline7_7.0-5_amd64.deb ... Unpacking libreadline7:amd64 (7.0-5) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.12-1_amd64.deb ... Unpacking gpgconf (2.2.12-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../06-libsqlite3-0_3.27.2-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.27.2-1) ... Selecting previously unselected package gpg. Preparing to unpack .../07-gpg_2.2.12-1_amd64.deb ... Unpacking gpg (2.2.12-1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../08-libapt-pkg-perl_0.1.34+b1_amd64.deb ... Unpacking libapt-pkg-perl (0.1.34+b1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../09-libcapture-tiny-perl_0.48-1_all.deb ... Unpacking libcapture-tiny-perl (0.48-1) ... Selecting previously unselected package libhtml-tagset-perl. Preparing to unpack .../10-libhtml-tagset-perl_3.20-3_all.deb ... Unpacking libhtml-tagset-perl (3.20-3) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../11-liburi-perl_1.76-1_all.deb ... Unpacking liburi-perl (1.76-1) ... Selecting previously unselected package libhtml-parser-perl. Preparing to unpack .../12-libhtml-parser-perl_3.72-3+b3_amd64.deb ... Unpacking libhtml-parser-perl (3.72-3+b3) ... Selecting previously unselected package libcgi-pm-perl. Preparing to unpack .../13-libcgi-pm-perl_4.40-1_all.deb ... Unpacking libcgi-pm-perl (4.40-1) ... Selecting previously unselected package libsub-name-perl. Preparing to unpack .../14-libsub-name-perl_0.21-1+b3_amd64.deb ... Unpacking libsub-name-perl (0.21-1+b3) ... Selecting previously unselected package libclass-accessor-perl. Preparing to unpack .../15-libclass-accessor-perl_0.51-1_all.deb ... Unpacking libclass-accessor-perl (0.51-1) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../16-libclone-perl_0.41-1+b1_amd64.deb ... Unpacking libclone-perl (0.41-1+b1) ... Selecting previously unselected package libdigest-hmac-perl. Preparing to unpack .../17-libdigest-hmac-perl_1.03+dfsg-2_all.deb ... Unpacking libdigest-hmac-perl (1.03+dfsg-2) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../18-libtimedate-perl_2.3000-2_all.deb ... Unpacking libtimedate-perl (2.3000-2) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../19-libssl1.1_1.1.1b-1_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1b-1) ... Selecting previously unselected package perl-openssl-defaults:amd64. Preparing to unpack .../20-perl-openssl-defaults_3_amd64.deb ... Unpacking perl-openssl-defaults:amd64 (3) ... Selecting previously unselected package libnet-ssleay-perl. Preparing to unpack .../21-libnet-ssleay-perl_1.85-2+b1_amd64.deb ... Unpacking libnet-ssleay-perl (1.85-2+b1) ... Selecting previously unselected package libio-socket-ssl-perl. Preparing to unpack .../22-libio-socket-ssl-perl_2.060-3_all.deb ... Unpacking libio-socket-ssl-perl (2.060-3) ... Selecting previously unselected package libnet-smtp-ssl-perl. Preparing to unpack .../23-libnet-smtp-ssl-perl_1.04-1_all.deb ... Unpacking libnet-smtp-ssl-perl (1.04-1) ... Selecting previously unselected package libmailtools-perl. Preparing to unpack .../24-libmailtools-perl_2.18-1_all.deb ... Unpacking libmailtools-perl (2.18-1) ... Selecting previously unselected package libnet-ip-perl. Preparing to unpack .../25-libnet-ip-perl_1.26-2_all.deb ... Unpacking libnet-ip-perl (1.26-2) ... Selecting previously unselected package libnet-dns-perl. Preparing to unpack .../26-libnet-dns-perl_1.19-1_all.deb ... Unpacking libnet-dns-perl (1.19-1) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../27-libnet-domain-tld-perl_1.75-1_all.deb ... Unpacking libnet-domain-tld-perl (1.75-1) ... Selecting previously unselected package libemail-valid-perl. Preparing to unpack .../28-libemail-valid-perl_1.202-1_all.deb ... Unpacking libemail-valid-perl (1.202-1) ... Selecting previously unselected package libexporter-tiny-perl. Preparing to unpack .../29-libexporter-tiny-perl_1.002001-1_all.deb ... Unpacking libexporter-tiny-perl (1.002001-1) ... Selecting previously unselected package libipc-system-simple-perl. Preparing to unpack .../30-libipc-system-simple-perl_1.25-4_all.deb ... Unpacking libipc-system-simple-perl (1.25-4) ... Selecting previously unselected package libfile-basedir-perl. Preparing to unpack .../31-libfile-basedir-perl_0.08-1_all.deb ... Unpacking libfile-basedir-perl (0.08-1) ... Selecting previously unselected package libfuture-perl. Preparing to unpack .../32-libfuture-perl_0.39-1_all.deb ... Unpacking libfuture-perl (0.39-1) ... Selecting previously unselected package libstruct-dumb-perl. Preparing to unpack .../33-libstruct-dumb-perl_0.09-1_all.deb ... Unpacking libstruct-dumb-perl (0.09-1) ... Selecting previously unselected package libio-async-perl. Preparing to unpack .../34-libio-async-perl_0.72-1_all.deb ... Unpacking libio-async-perl (0.72-1) ... Selecting previously unselected package libio-pty-perl. Preparing to unpack .../35-libio-pty-perl_1%3a1.08-1.1+b5_amd64.deb ... Unpacking libio-pty-perl (1:1.08-1.1+b5) ... Selecting previously unselected package libipc-run-perl. Preparing to unpack .../36-libipc-run-perl_20180523.0-1_all.deb ... Unpacking libipc-run-perl (20180523.0-1) ... Selecting previously unselected package liblist-moreutils-perl. Preparing to unpack .../37-liblist-moreutils-perl_0.416-1+b4_amd64.deb ... Unpacking liblist-moreutils-perl (0.416-1+b4) ... Selecting previously unselected package libparse-debianchangelog-perl. Preparing to unpack .../38-libparse-debianchangelog-perl_1.2.0-13_all.deb ... Unpacking libparse-debianchangelog-perl (1.2.0-13) ... Selecting previously unselected package libpath-tiny-perl. Preparing to unpack .../39-libpath-tiny-perl_0.108-1_all.deb ... Unpacking libpath-tiny-perl (0.108-1) ... Selecting previously unselected package libtext-levenshtein-perl. Preparing to unpack .../40-libtext-levenshtein-perl_0.13-1_all.deb ... Unpacking libtext-levenshtein-perl (0.13-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../41-libtry-tiny-perl_0.30-1_all.deb ... Unpacking libtry-tiny-perl (0.30-1) ... Selecting previously unselected package libyaml-0-2:amd64. Preparing to unpack .../42-libyaml-0-2_0.2.1-1_amd64.deb ... Unpacking libyaml-0-2:amd64 (0.2.1-1) ... Selecting previously unselected package libyaml-libyaml-perl. Preparing to unpack .../43-libyaml-libyaml-perl_0.76+repack-1_amd64.deb ... Unpacking libyaml-libyaml-perl (0.76+repack-1) ... Selecting previously unselected package patchutils. Preparing to unpack .../44-patchutils_0.3.4-2_amd64.deb ... Unpacking patchutils (0.3.4-2) ... Selecting previously unselected package t1utils. Preparing to unpack .../45-t1utils_1.41-3_amd64.deb ... Unpacking t1utils (1.41-3) ... Selecting previously unselected package lintian. Preparing to unpack .../46-lintian_2.9.1_all.deb ... Unpacking lintian (2.9.1) ... Selecting previously unselected package sbuild-build-depends-lintian-dummy:armhf. Preparing to unpack .../47-sbuild-build-depends-lintian-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.34+b1) ... Setting up libstruct-dumb-perl (0.09-1) ... Setting up libio-pty-perl (1:1.08-1.1+b5) ... Setting up libclone-perl (0.41-1+b1) ... Setting up libyaml-0-2:amd64 (0.2.1-1) ... Setting up libssl1.1:amd64 (1.1.1b-1) ... Setting up libhtml-tagset-perl (3.20-3) ... Setting up libsqlite3-0:amd64 (3.27.2-1) ... Setting up libfuture-perl (0.39-1) ... Setting up libyaml-libyaml-perl (0.76+repack-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up perl-openssl-defaults:amd64 (3) ... Setting up libtext-levenshtein-perl (0.13-1) ... Setting up libassuan0:amd64 (2.5.2-1) ... Setting up libio-async-perl (0.72-1) ... Setting up patchutils (0.3.4-2) ... Setting up libdigest-hmac-perl (1.03+dfsg-2) ... Setting up libipc-system-simple-perl (1.25-4) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up t1utils (1.41-3) ... Setting up diffstat (1.62-1) ... Setting up libipc-run-perl (20180523.0-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libsub-name-perl (0.21-1+b3) ... Setting up libpath-tiny-perl (0.108-1) ... Setting up netbase (5.6) ... Setting up libexporter-tiny-perl (1.002001-1) ... Setting up libclass-accessor-perl (0.51-1) ... Setting up libnet-ip-perl (1.26-2) ... Setting up readline-common (7.0-5) ... Setting up liburi-perl (1.76-1) ... Setting up libreadline7:amd64 (7.0-5) ... Setting up libnet-ssleay-perl (1.85-2+b1) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b4) ... Setting up libnet-dns-perl (1.19-1) ... Setting up libhtml-parser-perl (3.72-3+b3) ... Setting up gpgconf (2.2.12-1) ... Setting up libio-socket-ssl-perl (2.060-3) ... Setting up gpg (2.2.12-1) ... Setting up libcgi-pm-perl (4.40-1) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmailtools-perl (2.18-1) ... Setting up libparse-debianchangelog-perl (1.2.0-13) ... Setting up libemail-valid-perl (1.202-1) ... Setting up lintian (2.9.1) ... Setting up sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Processing triggers for man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.28-7) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libgkarrays_2.1.0+dfsg-2_armhf.changes: --------------------------------------- Format: 1.8 Date: Tue, 17 Jul 2018 21:09:29 +0200 Source: libgkarrays Binary: libgkarrays-dev libgkarrays1 libgkarrays1-dbgsym Built-For-Profiles: cross nocheck Architecture: armhf Version: 2.1.0+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: libgkarrays-dev - library to query large collection of NGS sequences (development) libgkarrays1 - library to query large collection of NGS sequences Changes: libgkarrays (2.1.0+dfsg-2) unstable; urgency=medium . * debhelper 11 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.5 Checksums-Sha1: 60013a591b1b48193675bb9b500d58c6af07f9dc 89988 libgkarrays-dev_2.1.0+dfsg-2_armhf.deb 26efe906fdc8134a3864098951868882786f006b 290516 libgkarrays1-dbgsym_2.1.0+dfsg-2_armhf.deb fcb7f1a1b88d64708929e12210e50cdcbcde3378 61604 libgkarrays1_2.1.0+dfsg-2_armhf.deb d82a5c7f06bceac0cbebb1199eae4a4382d3cc21 5248 libgkarrays_2.1.0+dfsg-2_armhf.buildinfo Checksums-Sha256: b33545f3d443f71c9bcf4f9b917f74bc536c3d141e7293a0845c4a1a4a421396 89988 libgkarrays-dev_2.1.0+dfsg-2_armhf.deb e1899d9cad1c4fb2a2c9d79559358dfc4fd4cb942fb8cc6bc74736a23acd291f 290516 libgkarrays1-dbgsym_2.1.0+dfsg-2_armhf.deb fcb7ca9b95062cb0f132f4ceb657cc7f51c1149c73361cdc92c47a5bcc283da3 61604 libgkarrays1_2.1.0+dfsg-2_armhf.deb 73fda79069a90a4de81e4a426d580ef7e98cdb83453dc442b9b53a3ee33ae6e3 5248 libgkarrays_2.1.0+dfsg-2_armhf.buildinfo Files: b1af90004180bf50990a5cd978f3d93a 89988 libdevel optional libgkarrays-dev_2.1.0+dfsg-2_armhf.deb cb95a332a50732cc2b99711db2e3aadd 290516 debug optional libgkarrays1-dbgsym_2.1.0+dfsg-2_armhf.deb 15e142af9ab74807ab9e33a9286c5d99 61604 libs optional libgkarrays1_2.1.0+dfsg-2_armhf.deb f33eea65169332133adca2c01f7f77d5 5248 science optional libgkarrays_2.1.0+dfsg-2_armhf.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: libgkarrays Binary: libgkarrays1 libgkarrays-dev Architecture: armhf Version: 2.1.0+dfsg-2 Checksums-Md5: b1af90004180bf50990a5cd978f3d93a 89988 libgkarrays-dev_2.1.0+dfsg-2_armhf.deb cb95a332a50732cc2b99711db2e3aadd 290516 libgkarrays1-dbgsym_2.1.0+dfsg-2_armhf.deb 15e142af9ab74807ab9e33a9286c5d99 61604 libgkarrays1_2.1.0+dfsg-2_armhf.deb Checksums-Sha1: 60013a591b1b48193675bb9b500d58c6af07f9dc 89988 libgkarrays-dev_2.1.0+dfsg-2_armhf.deb 26efe906fdc8134a3864098951868882786f006b 290516 libgkarrays1-dbgsym_2.1.0+dfsg-2_armhf.deb fcb7f1a1b88d64708929e12210e50cdcbcde3378 61604 libgkarrays1_2.1.0+dfsg-2_armhf.deb Checksums-Sha256: b33545f3d443f71c9bcf4f9b917f74bc536c3d141e7293a0845c4a1a4a421396 89988 libgkarrays-dev_2.1.0+dfsg-2_armhf.deb e1899d9cad1c4fb2a2c9d79559358dfc4fd4cb942fb8cc6bc74736a23acd291f 290516 libgkarrays1-dbgsym_2.1.0+dfsg-2_armhf.deb fcb7ca9b95062cb0f132f4ceb657cc7f51c1149c73361cdc92c47a5bcc283da3 61604 libgkarrays1_2.1.0+dfsg-2_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Thu, 28 Feb 2019 20:28:54 +0000 Build-Path: /<>/libgkarrays-2.1.0+dfsg Installed-Build-Depends: adduser (= 3.118), apt (= 1.8.0~rc4), autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 10.1), base-passwd (= 3.5.46), bash (= 5.0-2), binutils (= 2.31.1-14), binutils-common (= 2.31.1-14), binutils-x86-64-linux-gnu (= 2.31.1-14), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.33.1-0.1), build-essential (= 12.5), bzip2 (= 1.0.6-9), coreutils (= 8.30-2), cpp (= 4:8.2.0-2), cpp-8 (= 8.3.0-2), d-shlibs (= 0.84), dash (= 0.5.10.2-5), debconf (= 1.5.71), debhelper (= 12.1.1), debian-archive-keyring (= 2018.1), debianutils (= 4.8.6.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.1.1-1), diffutils (= 1:3.7-2), dpkg (= 1.19.5), dpkg-dev (= 1.19.5), dwz (= 0.12-3), fdisk (= 2.33.1-0.1), file (= 1:5.35-2), findutils (= 4.6.0+git+20190209-2), g++ (= 4:8.2.0-2), g++-8 (= 8.3.0-2), gcc (= 4:8.2.0-2), gcc-8 (= 8.3.0-2), gcc-8-base (= 8.3.0-2), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), gpgv (= 2.2.12-1), grep (= 3.3-1), groff-base (= 1.22.4-2), gzip (= 1.9-3), hostname (= 3.21), init-system-helpers (= 1.56+nmu1), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.52-5), libapt-pkg5.0 (= 1.8.0~rc4), libarchive-zip-perl (= 1.64-1), libasan5 (= 8.3.0-2), libatomic1 (= 8.3.0-2), libattr1 (= 1:2.4.48-1), libaudit-common (= 1:2.8.4-2), libaudit1 (= 1:2.8.4-2), libbinutils (= 2.31.1-14), libblkid1 (= 2.33.1-0.1), libbsd0 (= 0.9.1-2), libbz2-1.0 (= 1.0.6-9), libc-bin (= 2.28-7), libc-dev-bin (= 2.28-7), libc6 (= 2.28-7), libc6-dev (= 2.28-7), libcap-ng0 (= 0.7.9-2), libcc1-0 (= 8.3.0-2), libcroco3 (= 0.6.12-3), libdb5.3 (= 5.3.28+dfsg1-0.5), libdebconfclient0 (= 0.247), libdpkg-perl (= 1.19.5), libelf1 (= 0.176-1), libfdisk1 (= 2.33.1-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.1.1-1), libgcc-8-dev (= 8.3.0-2), libgcc1 (= 1:8.3.0-2), libgcrypt20 (= 1.8.4-5), libgdbm-compat4 (= 1.18.1-3), libgdbm6 (= 1.18.1-3), libglib2.0-0 (= 2.58.3-1), libgmp10 (= 2:6.1.2+dfsg-4), libgnutls30 (= 3.6.6-2), libgomp1 (= 8.3.0-2), libgpg-error0 (= 1.35-1), libhogweed4 (= 3.4.1-1), libicu63 (= 63.1-6), libidn2-0 (= 2.0.5-1), libisl19 (= 0.20-2), libitm1 (= 8.3.0-2), liblsan0 (= 8.3.0-2), liblz4-1 (= 1.8.3-1), liblzma5 (= 5.2.4-1), libmagic-mgc (= 1:5.35-2), libmagic1 (= 1:5.35-2), libmount1 (= 2.33.1-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-2), libncurses6 (= 6.1+20181013-2), libncursesw6 (= 6.1+20181013-2), libnettle6 (= 3.4.1-1), libp11-kit0 (= 0.23.15-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre3 (= 2:8.39-11), libperl5.28 (= 5.28.1-4), libpipeline1 (= 1.5.1-2), libquadmath0 (= 8.3.0-2), libseccomp2 (= 2.3.3-4), libselinux1 (= 2.8-1+b1), libsemanage-common (= 2.8-2), libsemanage1 (= 2.8-2), libsepol1 (= 2.8-1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.33.1-0.1), libstdc++-8-dev (= 8.3.0-2), libstdc++6 (= 8.3.0-2), libsystemd0 (= 241-1), libtasn1-6 (= 4.13-3), libtinfo6 (= 6.1+20181013-2), libtool (= 2.4.6-10), libtsan0 (= 8.3.0-2), libubsan1 (= 8.3.0-2), libuchardet0 (= 0.0.6-3), libudev1 (= 241-1), libunistring2 (= 0.9.10-1), libuuid1 (= 2.33.1-0.1), libxml2 (= 2.9.4+dfsg1-7+b3), libzstd1 (= 1.3.8+dfsg-3), linux-libc-dev (= 4.19.20-1), login (= 1:4.5-1.1), m4 (= 1.4.18-2), make (= 4.2.1-1.2), man-db (= 2.8.5-2), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20181013-2), ncurses-bin (= 6.1+20181013-2), passwd (= 1:4.5-1.1), patch (= 2.7.6-3), perl (= 5.28.1-4), perl-base (= 5.28.1-4), perl-modules-5.28 (= 5.28.1-4), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.93-8), tar (= 1.30+dfsg-5), util-linux (= 2.33.1-0.1), xz-utils (= 5.2.4-1), zlib1g (= 1:1.2.11.dfsg-1), zlib1g-dev (= 1:1.2.11.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="POSIX" SOURCE_DATE_EPOCH="1531854569" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libgkarrays-dev_2.1.0+dfsg-2_armhf.deb -------------------------------------- new Debian package, version 2.0. size 89988 bytes: control archive=1564 bytes. 963 bytes, 23 lines control 1990 bytes, 25 lines md5sums Package: libgkarrays-dev Source: libgkarrays Version: 2.1.0+dfsg-2 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 448 Depends: libgkarrays1 (= 2.1.0+dfsg-2) Section: libdevel Priority: optional Homepage: http://crac.gforge.inria.fr/gkarrays/ Description: library to query large collection of NGS sequences (development) Gk-arrays are provided as a simple-to-use C++ library dedicated to queries on large collection of sequences as produced by high-throughput sequencers (e.g. HiSeq 2000 from Illumina, 454 from Roche). . Gk-arrays index k-mers of reads and allows one to answer different queries on that read collection (e.g. how many reads share this k-mer? where does this k-mer occur in the read collection?). . Gk-arrays consist of a space-efficient alternative to hash tables while being similar in terms of query times. . This is the development library for libgkarrays. drwxr-xr-x root/root 0 2018-07-17 19:09 ./ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/include/ lrwxrwxrwx root/root 0 2018-07-17 19:09 ./usr/include/libGkArrays -> libGkArrays-2.1.0 drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/ -rw-r--r-- root/root 8288 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/binvect.hxx -rw-r--r-- root/root 19920 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/bitvector.cxx -rw-r--r-- root/root 9852 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/bitvector.hxx -rw-r--r-- root/root 20802 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/gkArrays.h -rw-r--r-- root/root 8854 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/gkArraysBuilder.h -rw-r--r-- root/root 8559 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/gkArraysTypes.h -rw-r--r-- root/root 9026 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/gkCFPSBuilder.h -rw-r--r-- root/root 9283 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/gkIFABuilder.h -rw-r--r-- root/root 12439 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/gkSABuilder.h drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/kseq/ -rw-r--r-- root/root 12765 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/kseq/kseq.h -rw-r--r-- root/root 49375 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/largebinvect.cxx -rw-r--r-- root/root 14569 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/largebinvect.hxx -rw-r--r-- root/root 16651 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/readsReader.h -rw-r--r-- root/root 12355 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/solArray.h drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/sux/ -rw-r--r-- root/root 1661 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/sux/macros.h -rw-r--r-- root/root 605 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/sux/popcount.h -rw-r--r-- root/root 3115 2018-07-17 19:09 ./usr/include/libGkArrays-2.1.0/sux/rank9b.h lrwxrwxrwx root/root 0 2018-07-17 19:09 ./usr/include/libProgressBar -> libProgressBar-1.2.0 drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/include/libProgressBar-1.2.0/ -rw-r--r-- root/root 8886 2018-07-17 19:09 ./usr/include/libProgressBar-1.2.0/progressBar.h drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabihf/ -rw-r--r-- root/root 149746 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabihf/libGkArrays.a lrwxrwxrwx root/root 0 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabihf/libGkArrays.so -> libGkArrays.so.1.1.0 -rw-r--r-- root/root 11636 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabihf/libProgressBar.a lrwxrwxrwx root/root 0 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabihf/libProgressBar.so -> libProgressBar.so.0.1.2 drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabihf/pkgconfig/ -rw-r--r-- root/root 247 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabihf/pkgconfig/libGkArrays-2.1.0.pc lrwxrwxrwx root/root 0 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabihf/pkgconfig/libGkArrays.pc -> libGkArrays-2.1.0.pc -rw-r--r-- root/root 261 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabihf/pkgconfig/libProgressBar-1.2.0.pc lrwxrwxrwx root/root 0 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabihf/pkgconfig/libProgressBar.pc -> libProgressBar-1.2.0.pc drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/share/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/share/doc/libgkarrays-dev/ -rw-r--r-- root/root 250 2018-07-17 19:09 ./usr/share/doc/libgkarrays-dev/changelog.Debian.gz -rw-r--r-- root/root 5768 2013-12-11 14:49 ./usr/share/doc/libgkarrays-dev/changelog.gz -rw-r--r-- root/root 26907 2018-07-17 19:09 ./usr/share/doc/libgkarrays-dev/copyright libgkarrays1-dbgsym_2.1.0+dfsg-2_armhf.deb ------------------------------------------ new Debian package, version 2.0. size 290516 bytes: control archive=604 bytes. 440 bytes, 12 lines control 212 bytes, 2 lines md5sums Package: libgkarrays1-dbgsym Source: libgkarrays Version: 2.1.0+dfsg-2 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 320 Depends: libgkarrays1 (= 2.1.0+dfsg-2) Section: debug Priority: optional Description: debug symbols for libgkarrays1 Build-Ids: 2e919d73514aadadefe16acc84e87a5512f7e6f2 fa16e67b026bd062e56eaa088ef33dada65b2090 drwxr-xr-x root/root 0 2018-07-17 19:09 ./ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/debug/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/debug/.build-id/2e/ -rw-r--r-- root/root 7244 2018-07-17 19:09 ./usr/lib/debug/.build-id/2e/919d73514aadadefe16acc84e87a5512f7e6f2.debug drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/debug/.build-id/fa/ -rw-r--r-- root/root 307436 2018-07-17 19:09 ./usr/lib/debug/.build-id/fa/16e67b026bd062e56eaa088ef33dada65b2090.debug drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/share/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/share/doc/ lrwxrwxrwx root/root 0 2018-07-17 19:09 ./usr/share/doc/libgkarrays1-dbgsym -> libgkarrays1 libgkarrays1_2.1.0+dfsg-2_armhf.deb ----------------------------------- new Debian package, version 2.0. size 61604 bytes: control archive=1112 bytes. 936 bytes, 21 lines control 395 bytes, 5 lines md5sums 57 bytes, 2 lines shlibs 67 bytes, 2 lines triggers Package: libgkarrays1 Source: libgkarrays Version: 2.1.0+dfsg-2 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 142 Depends: libc6 (>= 2.4), libgcc1 (>= 1:3.5), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4) Section: libs Priority: optional Homepage: http://crac.gforge.inria.fr/gkarrays/ Description: library to query large collection of NGS sequences Gk-arrays are provided as a simple-to-use C++ library dedicated to queries on large collection of sequences as produced by high-throughput sequencers (e.g. HiSeq 2000 from Illumina, 454 from Roche). . Gk-arrays index k-mers of reads and allows one to answer different queries on that read collection (e.g. how many reads share this k-mer? where does this k-mer occur in the read collection?). . Gk-arrays consist of a space-efficient alternative to hash tables while being similar in terms of query times. drwxr-xr-x root/root 0 2018-07-17 19:09 ./ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabihf/ lrwxrwxrwx root/root 0 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabihf/libGkArrays.so.1 -> libGkArrays.so.1.1.0 -rw-r--r-- root/root 83368 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabihf/libGkArrays.so.1.1.0 lrwxrwxrwx root/root 0 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabihf/libProgressBar.so.0 -> libProgressBar.so.0.1.2 -rw-r--r-- root/root 13676 2018-07-17 19:09 ./usr/lib/arm-linux-gnueabihf/libProgressBar.so.0.1.2 drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/share/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-07-17 19:09 ./usr/share/doc/libgkarrays1/ -rw-r--r-- root/root 250 2018-07-17 19:09 ./usr/share/doc/libgkarrays1/changelog.Debian.gz -rw-r--r-- root/root 5768 2013-12-11 14:49 ./usr/share/doc/libgkarrays1/changelog.gz -rw-r--r-- root/root 26907 2018-07-17 19:09 ./usr/share/doc/libgkarrays1/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 18824 Build-Time: 55 Distribution: unstable Foreign Architectures: armhf Host Architecture: armhf Install-Time: 20 Job: libgkarrays_2.1.0+dfsg-2 Lintian: pass Machine Architecture: amd64 Package: libgkarrays Package-Time: 86 Source-Version: 2.1.0+dfsg-2 Space: 18824 Status: successful Version: 2.1.0+dfsg-2 -------------------------------------------------------------------------------- Finished at 2019-02-28T20:28:54Z Build needed 00:01:26, 18824k disk space