sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | libminc 2.4.03-3 (armel) Fri, 20 Nov 2020 22:44:39 +0000 | +==============================================================================+ Package: libminc Version: 2.4.03-3 Source Version: 2.4.03-3 Distribution: unstable Machine Architecture: amd64 Host Architecture: armel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-b0b1bd52-a723-4c4e-a946-ea4dcfff5aa4' with '<>' I: NOTICE: Log filtering will replace 'build/libminc-k31t3d/resolver-HKwnG9' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [37.0 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [37.0 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-11-20-0815.41.pdiff [7100 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-11-20-1418.15.pdiff [11.2 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-11-20-2015.48.pdiff [15.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-11-20-0815.41.pdiff [19.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-11-20-1418.15.pdiff [46.5 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-11-20-2015.48.pdiff [15.2 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-11-20-2015.48.pdiff [12.4 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-11-20-2015.48.pdiff [12.4 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main armel Packages [8196 kB] Fetched 8527 kB in 2s (5401 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: cpp-10 gcc-10 gcc-10-base init-system-helpers libasan6 libatomic1 libcap-ng0 libcc1-0 libgcc-10-dev libgcc-s1 libgomp1 libitm1 liblsan0 libquadmath0 libstdc++6 libsystemd0 libtsan0 libubsan1 libudev1 19 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 139 MB of archives. After this operation, 234 kB of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 init-system-helpers all 1.59 [47.2 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libsystemd0 amd64 246.6-4 [370 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libcc1-0 amd64 10.2.0-18 [39.7 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1 amd64 10.2.0-18 [99.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1 amd64 10.2.0-18 [25.8 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1 amd64 10.2.0-18 [9028 B] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6 amd64 10.2.0-18 [340 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0 amd64 10.2.0-18 [141 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0 amd64 10.2.0-18 [313 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1 amd64 10.2.0-18 [134 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libquadmath0 amd64 10.2.0-18 [145 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-10-dev amd64 10.2.0-18 [2331 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10 amd64 10.2.0-18 [71.0 MB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-10 amd64 10.2.0-18 [62.8 MB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-base amd64 10.2.0-18 [200 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6 amd64 10.2.0-18 [492 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1 amd64 10.2.0-18 [41.4 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libcap-ng0 amd64 0.7.9-2.2+b1 [14.8 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libudev1 amd64 246.6-4 [163 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 139 MB in 1s (134 MB/s) (Reading database ... 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Setting up liblsan0:amd64 (10.2.0-18) ... Setting up cpp-10 (10.2.0-18) ... Setting up libitm1:amd64 (10.2.0-18) ... Setting up libtsan0:amd64 (10.2.0-18) ... Setting up libgcc-10-dev:amd64 (10.2.0-18) ... Setting up gcc-10 (10.2.0-18) ... Processing triggers for libc-bin (2.31-4) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'libminc' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libminc.git Please use: git clone https://salsa.debian.org/med-team/libminc.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 820 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main libminc 2.4.03-3 (dsc) [2105 B] Get:2 http://debian.oregonstate.edu/debian unstable/main libminc 2.4.03-3 (tar) [809 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main libminc 2.4.03-3 (diff) [9048 B] Fetched 820 kB in 0s (4583 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/libminc-k31t3d/libminc-2.4.03' with '<>' I: NOTICE: Log filtering will replace 'build/libminc-k31t3d' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-exec, cmake, libnetcdf-dev, libnifti-dev, zlib1g-dev, libhdf5-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel Filtered Build-Depends: debhelper-compat (= 13), dh-exec, cmake, libnetcdf-dev, libnifti-dev, zlib1g-dev, libhdf5-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [434 B] Get:5 copy:/<>/apt_archive ./ Packages [523 B] Fetched 1914 B in 0s (78.8 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdextrautils build-essential cmake cmake-data cpp-10-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-exec dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-10-arm-linux-gnueabi gcc-10-arm-linux-gnueabi-base gcc-10-base:armel gcc-10-cross-base gcc-9-base:armel gcc-arm-linux-gnueabi gettext gettext-base groff-base hdf5-helpers:armel intltool-debian libaec-dev:armel libaec0:armel libarchive-zip-perl libarchive13 libasan5:armel libasan6-armel-cross libatomic1:armel libatomic1-armel-cross libbrotli1 libbrotli1:armel libc6:armel libc6-armel-cross libc6-dev libc6-dev:armel libc6-dev-armel-cross libcom-err2:armel libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:armel libcrypt1:armel libcurl3-gnutls:armel libcurl4 libcurl4-gnutls-dev:armel libdb5.3:armel libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libexpat1 libffi7:armel libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-armel-cross libgcc-9-dev:armel libgcc-s1:armel libgcc-s1-armel-cross libgcrypt20:armel libgfortran5:armel libglib2.0-0 libgmp10:armel libgnutls30:armel libgomp1:armel libgomp1-armel-cross libgpg-error0:armel libgssapi-krb5-2:armel libhdf5-103-1:armel libhdf5-cpp-103-1:armel libhdf5-dev:armel libhdf5-fortran-102:armel libhdf5-hl-100:armel libhdf5-hl-cpp-100:armel libhdf5-hl-fortran-100:armel libhogweed6:armel libicu67 libidn2-0:armel libio-string-perl libjpeg62-turbo:armel libjpeg62-turbo-dev:armel libjsoncpp1 libk5crypto3:armel libkeyutils1:armel libkrb5-3:armel libkrb5support0:armel libldap-2.4-2 libldap-2.4-2:armel liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libnetcdf-dev:armel libnetcdf18:armel libnettle8:armel libnghttp2-14 libnghttp2-14:armel libnifti-dev:armel libnifti2:armel libnsl-dev libnsl-dev:armel libnsl2:armel libnss-nis:armel libnss-nisplus:armel libp11-kit0:armel libperl5.32 libpipeline1 libprocps8 libpsl5 libpsl5:armel librhash0 librtmp1 librtmp1:armel libsasl2-2 libsasl2-2:armel libsasl2-modules-db libsasl2-modules-db:armel libsigsegv2 libssh2-1 libssh2-1:armel libssl1.1:armel libstdc++-10-dev libstdc++-10-dev-armel-cross libstdc++-9-dev:armel libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libsz2:armel libtasn1-6:armel libtirpc-dev libtirpc-dev:armel libtirpc3:armel libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libunistring2:armel libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db perl perl-modules-5.32 po-debconf procps sensible-utils ucf zlib1g:armel zlib1g-dev:armel Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc cmake-doc ninja-build gcc-10-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-10-multilib gcc-10-doc manpages-dev flex bison gdb-arm-linux-gnueabi gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff lrzip glibc-doc:armel libc-l10n:armel locales:armel glibc-doc manpages-dev:armel libcurl4-doc:armel libgnutls28-dev:armel libidn11-dev:armel libkrb5-dev:armel libldap2-dev:armel librtmp-dev:armel libssh2-1-dev:armel pkg-config:armel gnupg git bzr rng-tools:armel gnutls-bin:armel krb5-doc:armel krb5-user:armel libhdf5-doc:armel netcdf-bin:armel netcdf-doc:armel libstdc++-10-doc libstdc++-9-doc:armel libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx ca-certificates:armel ca-certificates libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpg-error-l10n:armel krb5-locales:armel libldap-common libldap-common:armel libgpm2 pkg-config:armel publicsuffix publicsuffix:armel libsasl2-modules libsasl2-modules:armel libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdextrautils build-essential cmake cmake-data cpp-10-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-exec dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-10-arm-linux-gnueabi gcc-10-arm-linux-gnueabi-base gcc-10-base:armel gcc-10-cross-base gcc-9-base:armel gcc-arm-linux-gnueabi gettext gettext-base groff-base hdf5-helpers:armel intltool-debian libaec-dev:armel libaec0:armel libarchive-zip-perl libarchive13 libasan5:armel libasan6-armel-cross libatomic1:armel libatomic1-armel-cross libbrotli1 libbrotli1:armel libc6:armel libc6-armel-cross libc6-dev libc6-dev:armel libc6-dev-armel-cross libcom-err2:armel libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:armel libcrypt1:armel libcurl3-gnutls:armel libcurl4 libcurl4-gnutls-dev:armel libdb5.3:armel libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libexpat1 libffi7:armel libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-armel-cross libgcc-9-dev:armel libgcc-s1:armel libgcc-s1-armel-cross libgcrypt20:armel libgfortran5:armel libglib2.0-0 libgmp10:armel libgnutls30:armel libgomp1:armel libgomp1-armel-cross libgpg-error0:armel libgssapi-krb5-2:armel libhdf5-103-1:armel libhdf5-cpp-103-1:armel libhdf5-dev:armel libhdf5-fortran-102:armel libhdf5-hl-100:armel libhdf5-hl-cpp-100:armel libhdf5-hl-fortran-100:armel libhogweed6:armel libicu67 libidn2-0:armel libio-string-perl libjpeg62-turbo:armel libjpeg62-turbo-dev:armel libjsoncpp1 libk5crypto3:armel libkeyutils1:armel libkrb5-3:armel libkrb5support0:armel libldap-2.4-2 libldap-2.4-2:armel liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libnetcdf-dev:armel libnetcdf18:armel libnettle8:armel libnghttp2-14 libnghttp2-14:armel libnifti-dev:armel libnifti2:armel libnsl-dev libnsl-dev:armel libnsl2:armel libnss-nis:armel libnss-nisplus:armel libp11-kit0:armel libperl5.32 libpipeline1 libprocps8 libpsl5 libpsl5:armel librhash0 librtmp1 librtmp1:armel libsasl2-2 libsasl2-2:armel libsasl2-modules-db libsasl2-modules-db:armel libsigsegv2 libssh2-1 libssh2-1:armel libssl1.1:armel libstdc++-10-dev libstdc++-10-dev-armel-cross libstdc++-9-dev:armel libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libsz2:armel libtasn1-6:armel libtirpc-dev libtirpc-dev:armel libtirpc3:armel libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libunistring2:armel libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db perl perl-modules-5.32 po-debconf procps sbuild-build-depends-main-dummy:armel sensible-utils ucf zlib1g:armel zlib1g-dev:armel 0 upgraded, 174 newly installed, 0 to remove and 0 not upgraded. Need to get 179 MB of archives. After this operation, 788 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [952 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.36.1-1 [140 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-5 [920 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.3-2 [1314 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.32 all 5.32.0-5 [2821 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.32 amd64 5.32.0-5 [4119 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.32.0-5 [293 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4+b1 [19.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main armel gcc-10-base armel 10.2.0-18 [200 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main armel gcc-9-base armel 9.3.0-18 [197 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.2+20201114-1 [102 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libprocps8 amd64 2:3.3.16-5 [62.7 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 procps amd64 2:3.3.16-5 [262 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.39-3 [69.1 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.2-4 [801 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabi amd64 2.35.1-3 [2779 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.17-1 [104 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.2.6-3 [190 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.31-4 [2344 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev amd64 10.2.0-18 [1740 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10 amd64 10.2.0-18 [69.2 MB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:10.2.0-1 [1644 B] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.5 [1473 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.5 [1909 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 cmake-data all 3.18.4-1 [1725 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-4 [8624 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-6.2 [692 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive13 amd64 3.4.3-2 [342 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libbrotli1 amd64 1.0.9-2+b1 [282 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2 [69.0 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2 [106 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-2.4-2 amd64 2.4.56+dfsg-1 [232 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libnghttp2-14 amd64 1.41.0-3 [74.0 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libpsl5 amd64 0.21.0-1.1 [55.3 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libssh2-1 amd64 1.8.0-2.1 [140 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libcurl4 amd64 7.72.0-1 [336 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.2.10-1 [96.9 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3.1 [77.6 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 librhash0 amd64 1.4.0-1 [124 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libuv1 amd64 1.40.0-1 [132 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 cmake amd64 3.18.4-1 [5599 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-arm-linux-gnueabi-base amd64 10.2.0-9cross1 [199 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-10-arm-linux-gnueabi amd64 10.2.0-9cross1 [7526 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabi amd64 4:10.2.0-1 [16.8 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3.1 [39.9 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10.2.0-9cross1 [195 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armel-cross all 2.31-1cross2 [1136 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-armel-cross all 10.2.0-9cross1 [38.3 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armel-cross all 10.2.0-9cross1 [85.0 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armel-cross all 10.2.0-9cross1 [8800 B] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-armel-cross all 10.2.0-9cross1 [292 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armel-cross all 10.2.0-9cross1 [368 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armel-cross all 10.2.0-9cross1 [114 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-10-dev-armel-cross all 10.2.0-9cross1 [688 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-arm-linux-gnueabi amd64 10.2.0-9cross1 [15.0 MB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabi amd64 4:10.2.0-1 [1456 B] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armel-cross all 5.7.6-1cross2 [1198 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armel-cross all 2.31-1cross2 [1936 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev-armel-cross all 10.2.0-9cross1 [1746 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10-arm-linux-gnueabi amd64 10.2.0-9cross1 [8190 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabi amd64 4:10.2.0-1 [1176 B] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2+b1 [337 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3.1 [38.9 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3.1 [49.9 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armel all 12.8 [6640 B] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.2.1 [188 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.9.0-1 [15.2 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.182-1 [166 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.66.3-1 [1364 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.2.1 [1007 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main amd64 dh-exec amd64 0.23.2 [26.6 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main armel hdf5-helpers armel 1.10.6+repack-2 [40.0 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main armel libgcc-s1 armel 10.2.0-18 [38.4 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main armel libcrypt1 armel 1:4.4.17-1 [96.3 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main armel libcom-err2 armel 1.45.6-1 [71.0 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main armel libkrb5support0 armel 1.18.3-1 [61.8 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main armel libk5crypto3 armel 1.18.3-1 [109 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main armel libkeyutils1 armel 1.6.1-2 [14.5 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main armel libssl1.1 armel 1.1.1h-1 [1274 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main armel libkrb5-3 armel 1.18.3-1 [315 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main armel libgssapi-krb5-2 armel 1.18.3-1 [142 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main armel libtirpc3 armel 1.2.6-3 [71.5 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main armel libnsl2 armel 1.3.0-2 [33.0 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main armel libnss-nis armel 3.1-4 [21.8 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main armel libnss-nisplus armel 1.3-4 [18.6 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main armel libc6 armel 2.31-4 [2335 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main armel libaec0 armel 1.0.4-1 [19.8 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main armel libsz2 armel 1.0.4-1 [6692 B] Get:124 http://debian.oregonstate.edu/debian unstable/main armel libaec-dev armel 1.0.4-1 [17.8 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main armel libasan5 armel 9.3.0-18 [347 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main armel libatomic1 armel 10.2.0-18 [9048 B] Get:127 http://debian.oregonstate.edu/debian unstable/main armel libbrotli1 armel 1.0.9-2+b1 [279 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main armel linux-libc-dev armel 5.9.9-1 [1194 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main armel libcrypt-dev armel 1:4.4.17-1 [115 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main armel libtirpc-dev armel 1.2.6-3 [182 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main armel libnsl-dev armel 1.3.0-2 [61.7 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main armel libc6-dev armel 2.31-4 [1928 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main armel libgmp10 armel 2:6.2.1+dfsg-1 [509 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main armel libnettle8 armel 3.6-2 [254 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main armel libhogweed6 armel 3.6-2 [300 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main armel libunistring2 armel 0.9.10-4 [359 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main armel libidn2-0 armel 2.3.0-4 [83.6 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main armel libffi7 armel 3.3-5 [19.8 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main armel libp11-kit0 armel 0.23.21-2 [314 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main armel libtasn1-6 armel 4.16.0-2 [49.8 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main armel libgnutls30 armel 3.6.15-4 [1119 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main armel libdb5.3 armel 5.3.28+dfsg1-0.6 [572 kB] Get:143 http://debian.oregonstate.edu/debian unstable/main armel libsasl2-modules-db armel 2.1.27+dfsg-2 [67.6 kB] Get:144 http://debian.oregonstate.edu/debian unstable/main armel libsasl2-2 armel 2.1.27+dfsg-2 [98.7 kB] Get:145 http://debian.oregonstate.edu/debian unstable/main armel libldap-2.4-2 armel 2.4.56+dfsg-1 [208 kB] Get:146 http://debian.oregonstate.edu/debian unstable/main armel libnghttp2-14 armel 1.41.0-3 [63.1 kB] Get:147 http://debian.oregonstate.edu/debian unstable/main armel libpsl5 armel 0.21.0-1.1 [54.1 kB] Get:148 http://debian.oregonstate.edu/debian unstable/main armel zlib1g armel 1:1.2.11.dfsg-2 [84.7 kB] Get:149 http://debian.oregonstate.edu/debian unstable/main armel librtmp1 armel 2.4+20151223.gitfa8646d.1-2+b2 [55.1 kB] Get:150 http://debian.oregonstate.edu/debian unstable/main armel libgpg-error0 armel 1.38-2 [67.6 kB] Get:151 http://debian.oregonstate.edu/debian unstable/main armel libgcrypt20 armel 1.8.7-2 [481 kB] Get:152 http://debian.oregonstate.edu/debian unstable/main armel libssh2-1 armel 1.8.0-2.1 [126 kB] Get:153 http://debian.oregonstate.edu/debian unstable/main armel libcurl3-gnutls armel 7.72.0-1 [297 kB] Get:154 http://debian.oregonstate.edu/debian unstable/main armel libcurl4-gnutls-dev armel 7.72.0-1 [391 kB] Get:155 http://debian.oregonstate.edu/debian unstable/main armel libgomp1 armel 10.2.0-18 [87.0 kB] Get:156 http://debian.oregonstate.edu/debian unstable/main armel libstdc++6 armel 10.2.0-18 [409 kB] Get:157 http://debian.oregonstate.edu/debian unstable/main armel libubsan1 armel 10.2.0-18 [115 kB] Get:158 http://debian.oregonstate.edu/debian unstable/main armel libgcc-9-dev armel 9.3.0-18 [646 kB] Get:159 http://debian.oregonstate.edu/debian unstable/main armel libgfortran5 armel 10.2.0-18 [248 kB] Get:160 http://debian.oregonstate.edu/debian unstable/main armel libhdf5-103-1 armel 1.10.6+repack-2 [1189 kB] Get:161 http://debian.oregonstate.edu/debian unstable/main armel libhdf5-cpp-103-1 armel 1.10.6+repack-2 [127 kB] Get:162 http://debian.oregonstate.edu/debian unstable/main armel libhdf5-fortran-102 armel 1.10.6+repack-2 [92.3 kB] Get:163 http://debian.oregonstate.edu/debian unstable/main armel libhdf5-hl-100 armel 1.10.6+repack-2 [78.7 kB] Get:164 http://debian.oregonstate.edu/debian unstable/main armel libhdf5-hl-fortran-100 armel 1.10.6+repack-2 [49.6 kB] Get:165 http://debian.oregonstate.edu/debian unstable/main armel libhdf5-hl-cpp-100 armel 1.10.6+repack-2 [37.0 kB] Get:166 http://debian.oregonstate.edu/debian unstable/main armel zlib1g-dev armel 1:1.2.11.dfsg-2 [185 kB] Get:167 http://debian.oregonstate.edu/debian unstable/main armel libjpeg62-turbo armel 1:2.0.5-1.1 [122 kB] Get:168 http://debian.oregonstate.edu/debian unstable/main armel libjpeg62-turbo-dev armel 1:2.0.5-1.1 [241 kB] Get:169 http://debian.oregonstate.edu/debian unstable/main armel libhdf5-dev armel 1.10.6+repack-2 [2451 kB] Get:170 http://debian.oregonstate.edu/debian unstable/main armel libnetcdf18 armel 1:4.7.4-1 [349 kB] Get:171 http://debian.oregonstate.edu/debian unstable/main armel libnetcdf-dev armel 1:4.7.4-1 [93.6 kB] Get:172 http://debian.oregonstate.edu/debian unstable/main armel libnifti2 armel 2.0.0+git186-g84740c2-1 [144 kB] Get:173 http://debian.oregonstate.edu/debian unstable/main armel libnifti-dev armel 2.0.0+git186-g84740c2-1 [144 kB] Get:174 http://debian.oregonstate.edu/debian unstable/main armel libstdc++-9-dev armel 9.3.0-18 [1746 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 179 MB in 2s (98.9 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10508 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.36.1-1_amd64.deb ... Unpacking bsdextrautils (2.36.1-1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../001-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-5_amd64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../003-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.3-2_amd64.deb ... Unpacking man-db (2.9.3-2) ... Selecting previously unselected package perl-modules-5.32. Preparing to unpack .../005-perl-modules-5.32_5.32.0-5_all.deb ... Unpacking perl-modules-5.32 (5.32.0-5) ... 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Preparing to unpack .../172-libstdc++-9-dev_9.3.0-18_armel.deb ... Unpacking libstdc++-9-dev:armel (9.3.0-18) ... Selecting previously unselected package sbuild-build-depends-main-dummy:armel. Preparing to unpack .../173-sbuild-build-depends-main-dummy_0.invalid.0_armel.deb ... Unpacking sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libexpat1:amd64 (2.2.10-1) ... Setting up libpipeline1:amd64 (1.5.3-1) ... Setting up libpsl5:amd64 (0.21.0-1.1) ... Setting up binutils-arm-linux-gnueabi (2.35.1-3) ... Setting up bsdextrautils (2.36.1-1) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up hdf5-helpers:armel (1.10.6+repack-2) ... Setting up libicu67:amd64 (67.1-4) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libglib2.0-0:amd64 (2.66.3-1) ... No schema files found: doing nothing. Setting up perl-modules-5.32 (5.32.0-5) ... Setting up libbrotli1:amd64 (1.0.9-2+b1) ... Setting up libnghttp2-14:amd64 (1.41.0-3) ... Setting up libmagic1:amd64 (1:5.39-3) ... Setting up linux-libc-dev:armel (5.9.9-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.39-3) ... Setting up gcc-10-arm-linux-gnueabi-base:amd64 (10.2.0-9cross1) ... Setting up linux-libc-dev-armel-cross (5.7.6-1cross2) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-2) ... Setting up gcc-10-base:armel (10.2.0-18) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3.1) ... Setting up libtirpc-dev:amd64 (1.2.6-3) ... Setting up libuv1:amd64 (1.40.0-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libncurses6:amd64 (6.2+20201114-1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up autopoint (0.19.8.1-10) ... Setting up libperl5.32:amd64 (5.32.0-5) ... Setting up gcc-10-cross-base (10.2.0-9cross1) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-2) ... Setting up libc6-armel-cross (2.31-1cross2) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up librhash0:amd64 (1.4.0-1) ... Setting up libcrypt-dev:amd64 (1:4.4.17-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libc6-dev:amd64 (2.31-4) ... Setting up libssh2-1:amd64 (1.8.0-2.1) ... Setting up cmake-data (3.18.4-1) ... Setting up libc6-dev-armel-cross (2.31-1cross2) ... Setting up libelf1:amd64 (0.182-1) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.2) ... Setting up liblocale-gettext-perl (1.07-4+b1) ... Setting up libprocps8:amd64 (2:3.3.16-5) ... Setting up libjsoncpp1:amd64 (1.7.4-3.1) ... Setting up cpp-10-arm-linux-gnueabi (10.2.0-9cross1) ... Setting up gcc-9-base:armel (9.3.0-18) ... Setting up libstdc++-10-dev:amd64 (10.2.0-18) ... Setting up g++-10 (10.2.0-18) ... Setting up libgomp1-armel-cross (10.2.0-9cross1) ... Setting up libtool (2.4.6-14) ... Setting up libarchive13:amd64 (3.4.3-2) ... Setting up libgcc-s1-armel-cross (10.2.0-9cross1) ... Setting up libldap-2.4-2:amd64 (2.4.56+dfsg-1) ... Setting up m4 (1.4.18-4) ... Setting up libstdc++6-armel-cross (10.2.0-9cross1) ... Setting up libatomic1-armel-cross (10.2.0-9cross1) ... Setting up perl (5.32.0-5) ... Setting up cpp-arm-linux-gnueabi (4:10.2.0-1) ... Setting up libubsan1-armel-cross (10.2.0-9cross1) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.5) ... Setting up autoconf (2.69-11.1) ... Setting up g++ (4:10.2.0-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up procps (2:3.3.16-5) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode Setting up libcurl4:amd64 (7.72.0-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libasan6-armel-cross (10.2.0-9cross1) ... Setting up automake (1:1.16.2-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up gettext (0.19.8.1-10) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libgcc-10-dev-armel-cross (10.2.0-9cross1) ... Setting up libdebhelper-perl (13.2.1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.20.5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cmake (3.18.4-1) ... Setting up build-essential (12.8) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up gcc-10-arm-linux-gnueabi (10.2.0-9cross1) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up libstdc++-10-dev-armel-cross (10.2.0-9cross1) ... Setting up po-debconf (1.0.21) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0134+dfsg-2+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up gcc-arm-linux-gnueabi (4:10.2.0-1) ... Setting up g++-10-arm-linux-gnueabi (10.2.0-9cross1) ... Setting up g++-arm-linux-gnueabi (4:10.2.0-1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3.1) ... Setting up dpkg-cross (2.6.15-3.1) ... Setting up crossbuild-essential-armel (12.8) ... Setting up libcrypt1:armel (1:4.4.17-1) ... Setting up libgcc-s1:armel (10.2.0-18) ... Setting up libcrypt-dev:armel (1:4.4.17-1) ... Setting up libtirpc3:armel (1.2.6-3) ... Setting up dh-autoreconf (19) ... Setting up libtirpc-dev:armel (1.2.6-3) ... Setting up libnsl2:armel (1.3.0-2) ... Setting up debhelper (13.2.1) ... Setting up dh-exec (0.23.2) ... Setting up libnss-nisplus:armel (1.3-4) ... Setting up libnss-nis:armel (3.1-4) ... Setting up libc6:armel (2.31-4) ... Setting up libnsl-dev:armel (1.3.0-2) ... Setting up libtasn1-6:armel (4.16.0-2) ... Setting up libc6-dev:armel (2.31-4) ... Setting up libdb5.3:armel (5.3.28+dfsg1-0.6) ... Setting up libstdc++6:armel (10.2.0-18) ... Setting up libkeyutils1:armel (1.6.1-2) ... Setting up libgpg-error0:armel (1.38-2) ... Setting up libssl1.1:armel (1.1.1h-1) ... Setting up libbrotli1:armel (1.0.9-2+b1) ... Setting up libffi7:armel (3.3-5) ... Setting up libnghttp2-14:armel (1.41.0-3) ... Setting up libunistring2:armel (0.9.10-4) ... Setting up libgcrypt20:armel (1.8.7-2) ... Setting up zlib1g:armel (1:1.2.11.dfsg-2) ... Setting up libidn2-0:armel (2.3.0-4) ... Setting up libcom-err2:armel (1.45.6-1) ... Setting up libgomp1:armel (10.2.0-18) ... Setting up libaec0:armel (1.0.4-1) ... Setting up libkrb5support0:armel (1.18.3-1) ... Setting up libsasl2-modules-db:armel (2.1.27+dfsg-2) ... Setting up libasan5:armel (9.3.0-18) ... Setting up libjpeg62-turbo:armel (1:2.0.5-1.1) ... Setting up libnettle8:armel (3.6-2) ... Setting up libjpeg62-turbo-dev:armel (1:2.0.5-1.1) ... Setting up libgmp10:armel (2:6.2.1+dfsg-1) ... Setting up libp11-kit0:armel (0.23.21-2) ... Setting up libatomic1:armel (10.2.0-18) ... Setting up libk5crypto3:armel (1.18.3-1) ... Setting up libsasl2-2:armel (2.1.27+dfsg-2) ... Setting up libgfortran5:armel (10.2.0-18) ... Setting up libubsan1:armel (10.2.0-18) ... Setting up zlib1g-dev:armel (1:1.2.11.dfsg-2) ... Setting up libssh2-1:armel (1.8.0-2.1) ... Setting up libkrb5-3:armel (1.18.3-1) ... Setting up libsz2:armel (1.0.4-1) ... Setting up libpsl5:armel (0.21.0-1.1) ... Setting up libhogweed6:armel (3.6-2) ... Setting up libnifti2:armel (2.0.0+git186-g84740c2-1) ... Setting up libaec-dev:armel (1.0.4-1) ... Setting up libgcc-9-dev:armel (9.3.0-18) ... Setting up libgnutls30:armel (3.6.15-4) ... Setting up librtmp1:armel (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libgssapi-krb5-2:armel (1.18.3-1) ... Setting up libhdf5-103-1:armel (1.10.6+repack-2) ... Setting up libhdf5-cpp-103-1:armel (1.10.6+repack-2) ... Setting up libnifti-dev:armel (2.0.0+git186-g84740c2-1) ... Setting up libhdf5-hl-100:armel (1.10.6+repack-2) ... Setting up libstdc++-9-dev:armel (9.3.0-18) ... Setting up libldap-2.4-2:armel (2.4.56+dfsg-1) ... Setting up libcurl3-gnutls:armel (7.72.0-1) ... Setting up libcurl4-gnutls-dev:armel (7.72.0-1) ... Setting up libhdf5-hl-cpp-100:armel (1.10.6+repack-2) ... Setting up libhdf5-fortran-102:armel (1.10.6+repack-2) ... Setting up libnetcdf18:armel (1:4.7.4-1) ... Setting up libhdf5-hl-fortran-100:armel (1.10.6+repack-2) ... Setting up libhdf5-dev:armel (1.10.6+repack-2) ... update-alternatives: using /usr/lib/arm-linux-gnueabi/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabi/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libnetcdf-dev:armel (1:4.7.4-1) ... Setting up sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Processing triggers for libc-bin (2.31-4) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armel included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-12-amd64 #1 SMP Debian 4.19.152-1 (2020-10-18) amd64 (x86_64) Toolchain package versions: binutils_2.35.1-3 dpkg-dev_1.20.5 g++-10_10.2.0-18 gcc-10_10.2.0-18 libc6-dev_2.31-4 libstdc++-10-dev_10.2.0-18 libstdc++-10-dev-armel-cross_10.2.0-9cross1 libstdc++-9-dev_9.3.0-18 libstdc++6_10.2.0-18 libstdc++6-armel-cross_10.2.0-9cross1 linux-libc-dev_5.9.9-1 Package versions: adduser_3.118 apt_2.1.11 autoconf_2.69-11.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.48 bash_5.1~rc2-1 binutils_2.35.1-3 binutils-arm-linux-gnueabi_2.35.1-3 binutils-common_2.35.1-3 binutils-x86-64-linux-gnu_2.35.1-3 bsdextrautils_2.36.1-1 bsdutils_1:2.36.1-1 build-essential_12.8 bzip2_1.0.8-4 cmake_3.18.4-1 cmake-data_3.18.4-1 coreutils_8.32-4+b1 cpp_4:10.2.0-1 cpp-10_10.2.0-18 cpp-10-arm-linux-gnueabi_10.2.0-9cross1 cpp-8_8.4.0-4 cpp-arm-linux-gnueabi_4:10.2.0-1 cross-config_2.6.15-3.1 crossbuild-essential-armel_12.8 dash_0.5.11+git20200708+dd9ef66-2 debconf_1.5.74 debhelper_13.2.1 debian-archive-keyring_2019.1 debianutils_4.11.2 dh-autoreconf_19 dh-exec_0.23.2 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dpkg_1.20.5 dpkg-cross_2.6.15-3.1 dpkg-dev_1.20.5 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1.1 fdisk_2.36.1-1 file_1:5.39-3 findutils_4.7.0+git20201010-2 g++_4:10.2.0-1 g++-10_10.2.0-18 g++-10-arm-linux-gnueabi_10.2.0-9cross1 g++-arm-linux-gnueabi_4:10.2.0-1 gcc_4:10.2.0-1 gcc-10_10.2.0-18 gcc-10-arm-linux-gnueabi_10.2.0-9cross1 gcc-10-arm-linux-gnueabi-base_10.2.0-9cross1 gcc-10-base_10.2.0-18 gcc-10-cross-base_10.2.0-9cross1 gcc-8-base_8.4.0-4 gcc-9-base_9.3.0-18 gcc-arm-linux-gnueabi_4:10.2.0-1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2 hdf5-helpers_1.10.6+repack-2 hostname_3.23 init-system-helpers_1.59 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libaec-dev_1.0.4-1 libaec0_1.0.4-1 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.1.11 libarchive-zip-perl_1.68-1 libarchive13_3.4.3-2 libasan5_9.3.0-18 libasan6_10.2.0-18 libasan6-armel-cross_10.2.0-9cross1 libatomic1_10.2.0-18 libatomic1-armel-cross_10.2.0-9cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3.1 libaudit1_1:2.8.5-3.1 libbinutils_2.35.1-3 libblkid1_2.36.1-1 libbrotli1_1.0.9-2+b1 libbz2-1.0_1.0.8-4 libc-bin_2.31-4 libc-dev-bin_2.31-4 libc6_2.31-4 libc6-armel-cross_2.31-1cross2 libc6-dev_2.31-4 libc6-dev-armel-cross_2.31-1cross2 libcap-ng0_0.7.9-2.2+b1 libcc1-0_10.2.0-18 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000003-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-3 libctf0_2.35.1-3 libcurl3-gnutls_7.72.0-1 libcurl4_7.72.0-1 libcurl4-gnutls-dev_7.72.0-1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.255 libdebhelper-perl_13.2.1 libdebian-dpkgcross-perl_2.6.15-3.1 libdpkg-perl_1.20.5 libelf1_0.182-1 libexpat1_2.2.10-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1.1 libfdisk1_2.36.1-1 libffi6_3.2.1-9 libffi7_3.3-5 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.9.0-1 libfile-which-perl_1.23-1 libgcc-10-dev_10.2.0-18 libgcc-10-dev-armel-cross_10.2.0-9cross1 libgcc-9-dev_9.3.0-18 libgcc-s1_10.2.0-18 libgcc-s1-armel-cross_10.2.0-9cross1 libgcrypt20_1.8.7-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libgfortran5_10.2.0-18 libglib2.0-0_2.66.3-1 libgmp10_2:6.2.1+dfsg-1 libgnutls30_3.6.15-4 libgomp1_10.2.0-18 libgomp1-armel-cross_10.2.0-9cross1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.18.3-1 libhdf5-103-1_1.10.6+repack-2 libhdf5-cpp-103-1_1.10.6+repack-2 libhdf5-dev_1.10.6+repack-2 libhdf5-fortran-102_1.10.6+repack-2 libhdf5-hl-100_1.10.6+repack-2 libhdf5-hl-cpp-100_1.10.6+repack-2 libhdf5-hl-fortran-100_1.10.6+repack-2 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.6-2 libicu67_67.1-4 libidn2-0_2.3.0-4 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 libitm1_10.2.0-18 libjpeg62-turbo_1:2.0.5-1.1 libjpeg62-turbo-dev_1:2.0.5-1.1 libjsoncpp1_1.7.4-3.1 libk5crypto3_1.18.3-1 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-1 libkrb5support0_1.18.3-1 libldap-2.4-2_2.4.56+dfsg-1 liblocale-gettext-perl_1.07-4+b1 liblsan0_10.2.0-18 liblz4-1_1.9.2-2 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmount1_2.36.1-1 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libmpx2_8.4.0-4 libncurses6_6.2+20201114-1 libncursesw6_6.2+20201114-1 libnetcdf-dev_1:4.7.4-1 libnetcdf18_1:4.7.4-1 libnettle6_3.5.1+really3.4.1-1 libnettle8_3.6-2 libnghttp2-14_1.41.0-3 libnifti-dev_2.0.0+git186-g84740c2-1 libnifti2_2.0.0+git186-g84740c2-1 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnss-nis_3.1-4 libnss-nisplus_1.3-4 libp11-kit0_0.23.21-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.28_5.28.1-6 libperl5.32_5.32.0-5 libpipeline1_1.5.3-1 libprocps8_2:3.3.16-5 libpsl5_0.21.0-1.1 libquadmath0_10.2.0-18 librhash0_1.4.0-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.5.0-3 libselinux1_3.1-2+b1 libsemanage-common_3.1-1 libsemanage1_3.1-1+b1 libsepol1_3.1-1 libsigsegv2_2.12-2 libsmartcols1_2.36.1-1 libss2_1.45.6-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1h-1 libstdc++-10-dev_10.2.0-18 libstdc++-10-dev-armel-cross_10.2.0-9cross1 libstdc++-9-dev_9.3.0-18 libstdc++6_10.2.0-18 libstdc++6-armel-cross_10.2.0-9cross1 libsub-override-perl_0.09-2 libsystemd0_246.6-4 libsz2_1.0.4-1 libtasn1-6_4.16.0-2 libtinfo6_6.2+20201114-1 libtirpc-common_1.2.6-3 libtirpc-dev_1.2.6-3 libtirpc3_1.2.6-3 libtool_2.4.6-14 libtsan0_10.2.0-18 libubsan1_10.2.0-18 libubsan1-armel-cross_10.2.0-9cross1 libuchardet0_0.0.7-1 libudev1_246.6-4 libunistring2_0.9.10-4 libuuid1_2.36.1-1 libuv1_1.40.0-1 libxml-libxml-perl_2.0134+dfsg-2+b1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-6.2 libyaml-perl_1.30-1 libzstd1_1.4.5+dfsg-4 linux-libc-dev_5.9.9-1 linux-libc-dev-armel-cross_5.7.6-1cross2 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.36.1-1 ncurses-base_6.2+20201114-1 ncurses-bin_6.2+20201114-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.32.0-5 perl-base_5.32.0-5 perl-modules-5.28_5.28.1-6 perl-modules-5.32_5.32.0-5 po-debconf_1.0.21 procps_2:3.3.16-5 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-5 tar_1.30+dfsg-7 tzdata_2020d-1 ucf_3.0043 util-linux_2.36.1-1 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libminc Binary: libminc2-5.2.0, libminc-dev Architecture: any Version: 2.4.03-3 Maintainer: Debian Med Packaging Team Uploaders: Steve M. Robbins , Andreas Tille Homepage: https://github.com/BIC-MNI/libminc Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/libminc Vcs-Git: https://salsa.debian.org/med-team/libminc.git Build-Depends: debhelper-compat (= 13), dh-exec, cmake, libnetcdf-dev, libnifti-dev, zlib1g-dev, libhdf5-dev Package-List: libminc-dev deb libdevel optional arch=any libminc2-5.2.0 deb libs optional arch=any Checksums-Sha1: 2cd8caad45d49cac77137e03ea584be76f32f923 809098 libminc_2.4.03.orig.tar.gz ec233ca6729bdada100788bed5a73203554319d7 9048 libminc_2.4.03-3.debian.tar.xz Checksums-Sha256: 7ee57846641d92988e96eb6d2c88ff2d922cd2b42a9e6256cf4213953ca896e4 809098 libminc_2.4.03.orig.tar.gz 796a72d00aec6b4af9f5e529fba90ba61f3e072d76c7af694d33482fa299ce92 9048 libminc_2.4.03-3.debian.tar.xz Files: 98b270f1ce536346662c34ee85e3e22a 809098 libminc_2.4.03.orig.tar.gz 52483d186c1d300ddc1e9fb9988106e7 9048 libminc_2.4.03-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- 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09:56:41 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libminc_2.4.03-3.dsc dpkg-source: info: extracting libminc in /<> dpkg-source: info: unpacking libminc_2.4.03.orig.tar.gz dpkg-source: info: unpacking libminc_2.4.03-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying build-using-system-find-dot-cmake dpkg-source: info: applying fix-uselibminc-cmake dpkg-source: info: applying netcdf-4.6.patch dpkg-source: info: applying remove-rpath.patch dpkg-source: info: applying initialize_arrays_in_tests.patch dpkg-source: info: applying disable-dimension-test.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-b0b1bd52-a723-4c4e-a946-ea4dcfff5aa4 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarmel -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package libminc dpkg-buildpackage: info: source version 2.4.03-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabi does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armel debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' rm -f cmake-modules/*HDF5* dh_auto_configure -- -DLIB_SUFFIX=/arm-linux-gnueabi -DBUILD_TESTING:BOOL=ON -DLIBMINC_BUILD_EZMINC_EXAMPLES:BOOL=ON -DLIBMINC_BUILD_SHARED_LIBS:BOOL=ON -DLIBMINC_MINC1_SUPPORT:BOOL=ON -DLIBMINC_USE_SYSTEM_NIFTI:BOOL=ON cd obj-arm-linux-gnueabi && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=armv7l -DCMAKE_C_COMPILER=arm-linux-gnueabi-gcc -DCMAKE_CXX_COMPILER=arm-linux-gnueabi-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/arm-linux-gnueabi-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/arm-linux-gnueabi-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/arm-linux-gnueabi-qmake -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabi -DLIB_SUFFIX=/arm-linux-gnueabi -DBUILD_TESTING:BOOL=ON -DLIBMINC_BUILD_EZMINC_EXAMPLES:BOOL=ON -DLIBMINC_BUILD_SHARED_LIBS:BOOL=ON -DLIBMINC_MINC1_SUPPORT:BOOL=ON -DLIBMINC_USE_SYSTEM_NIFTI:BOOL=ON .. -- The C compiler identification is GNU 10.2.0 -- The CXX compiler identification is GNU 10.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/arm-linux-gnueabi-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/arm-linux-gnueabi-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found NetCDF headers: /usr/include -- Found NetCDF library: /usr/lib/arm-linux-gnueabi/libnetcdf.so -- Found ZLIB: /usr/lib/arm-linux-gnueabi/libz.so (found version "1.2.11") -- Found HDF5: /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so;/usr/lib/arm-linux-gnueabi/libpthread.so;/usr/lib/arm-linux-gnueabi/libsz.so;/usr/lib/arm-linux-gnueabi/libz.so;/usr/lib/arm-linux-gnueabi/libdl.so;/usr/lib/arm-linux-gnueabi/libm.so (found version "1.10.6") found components: C -- Looking for mkstemp -- Looking for mkstemp - found -- Looking for tmpnam -- Looking for tmpnam - found -- Looking for tempnam -- Looking for tempnam - found -- Looking for strerror -- Looking for strerror - found -- Looking for popen -- Looking for popen - found -- Looking for fork -- Looking for fork - found -- Looking for vfork -- Looking for vfork - found -- Looking for fdopen -- Looking for fdopen - found -- Looking for strdup -- Looking for strdup - found -- Looking for getpwnam -- Looking for getpwnam - found -- Looking for select -- Looking for select - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for system -- Looking for system - found -- Looking for rint -- Looking for rint - found -- Looking for copysign -- Looking for copysign - found -- Looking for round -- Looking for round - found -- Looking for srand48 -- Looking for srand48 - found -- Looking for drand48 -- Looking for drand48 - found -- Looking for sleep -- Looking for sleep - found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for include file float.h -- Looking for include file float.h - found -- Looking for include file sys/dir.h -- Looking for include file sys/dir.h - found -- Looking for include file sys/ndir.h -- Looking for include file sys/ndir.h - not found -- Looking for include file sys/stat.h -- Looking for include file sys/stat.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file sys/wait.h -- Looking for include file sys/wait.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file time.h -- Looking for include file time.h - found -- Looking for include file values.h -- Looking for include file values.h - found -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file memory.h -- Looking for include file memory.h - found -- Looking for include file stdlib.h -- Looking for include file stdlib.h - found -- Looking for include file fcntl.h -- Looking for include file fcntl.h - found -- Looking for include file dlfcn.h -- Looking for include file dlfcn.h - found -- Looking for include file vfork.h -- Looking for include file vfork.h - not found -- Looking for include file inttypes.h -- Looking for include file inttypes.h - found -- Looking for include file string.h -- Looking for include file string.h - found -- Looking for include file strings.h -- Looking for include file strings.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Looking for include file sys/select.h -- Looking for include file sys/select.h - found -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR PKGCONFIG_EXECUTABLE PKG_CONFIG_EXECUTABLE QMAKE_EXECUTABLE -- Build files have been written to: /<>/obj-arm-linux-gnueabi make[1]: Leaving directory '/<>' dh_auto_build -a cd obj-arm-linux-gnueabi && make -j1 "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/obj-arm-linux-gnueabi' /usr/bin/cmake -S/<> -B/<>/obj-arm-linux-gnueabi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-arm-linux-gnueabi/CMakeFiles /<>/obj-arm-linux-gnueabi//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-arm-linux-gnueabi' make -f CMakeFiles/minc2_static.dir/build.make CMakeFiles/minc2_static.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/CMakeFiles/minc2_static.dir/DependInfo.cmake --color= Scanning dependencies of target minc2_static make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f CMakeFiles/minc2_static.dir/build.make CMakeFiles/minc2_static.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 0%] Building C object CMakeFiles/minc2_static.dir/libsrc2/convert.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/convert.c.o -c /<>/libsrc2/convert.c /<>/libsrc2/convert.c: In function ‘miconvert_voxel_to_real’: /<>/libsrc2/convert.c:107:39: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 107 | miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); | ^~~~~~~ /<>/libsrc2/convert.c: In function ‘miset_real_value’: /<>/libsrc2/convert.c:256:45: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 256 | miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); | ^~~~~ /<>/libsrc2/convert.c: In function ‘miget_volume_real_range’: /<>/libsrc2/convert.c:528:23: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 528 | buffer = malloc(n * sizeof(double)); | ^ /<>/libsrc2/convert.c:554:23: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 554 | buffer = malloc(n * sizeof(double)); | ^ [ 1%] Building C object CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o -c /<>/libsrc2/datatype.c [ 1%] Building C object CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o -c /<>/libsrc2/dimension.c /<>/libsrc2/dimension.c: In function ‘micopy_dimension’: /<>/libsrc2/dimension.c:99:61: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 99 | handle->offsets = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/libsrc2/dimension.c:135:60: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 135 | handle->widths = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/libsrc2/dimension.c: In function ‘micreate_dimension’: /<>/libsrc2/dimension.c:288:51: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 288 | handle->widths = ( double * ) malloc ( length * sizeof ( double ) ); | ~~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/libsrc2/dimension.c: In function ‘miget_volume_dimensions’: /<>/libsrc2/dimension.c:417:20: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 417 | number_of_dims = volume->number_of_dims; | ^~~~~~ /<>/libsrc2/dimension.c:422:16: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 422 | max_dims = array_length; | ^~~~~~~~~~~~ /<>/libsrc2/dimension.c: In function ‘miset_apparent_dimension_order’: /<>/libsrc2/dimension.c:486:69: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 486 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); | ^ /<>/libsrc2/dimension.c: In function ‘miset_apparent_dimension_order_by_name’: /<>/libsrc2/dimension.c:580:69: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 580 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); | ^ /<>/libsrc2/dimension.c: In function ‘miget_dimension_offsets’: /<>/libsrc2/dimension.c:1036:43: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 1036 | offsets[j] = dimension->start + ( i * dimension->step ); | ^ /<>/libsrc2/dimension.c: In function ‘miset_dimension_offsets’: /<>/libsrc2/dimension.c:1083:47: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1083 | ( double * ) malloc ( dimension->length * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/libsrc2/dimension.c: In function ‘miset_dimension_sampling_flag’: /<>/libsrc2/dimension.c:1136:21: warning: unsigned conversion from ‘int’ to ‘midimattr_t’ {aka ‘unsigned int’} changes value from ‘-2’ to ‘4294967294’ [-Wsign-conversion] 1136 | dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; | ^~ /<>/libsrc2/dimension.c:1138:21: warning: unsigned conversion from ‘int’ to ‘midimattr_t’ {aka ‘unsigned int’} changes value from ‘-3’ to ‘4294967293’ [-Wsign-conversion] 1138 | dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; | ^~ /<>/libsrc2/dimension.c: In function ‘miget_dimension_start’: /<>/libsrc2/dimension.c:1356:57: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 1356 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /<>/libsrc2/dimension.c:1362:61: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 1362 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /<>/libsrc2/dimension.c:1369:63: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 1369 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /<>/libsrc2/dimension.c: In function ‘miset_dimension_widths’: /<>/libsrc2/dimension.c:1651:65: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1651 | dimension->widths = ( double * ) malloc ( dimension->length * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ [ 2%] Building C object CMakeFiles/minc2_static.dir/libsrc2/free.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/free.c.o -c /<>/libsrc2/free.c [ 2%] Building C object CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o -c /<>/libsrc2/grpattr.c /<>/libsrc2/grpattr.c: In function ‘full_path_for_attr’: /<>/libsrc2/grpattr.c:41:24: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 41 | snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", | ^~~~~~ /<>/libsrc2/grpattr.c:48:46: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 48 | strncpy ( fullpath, MI_ROOT_PATH "/" , length ); | ^~~~~~ /<>/libsrc2/grpattr.c:50:58: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 50 | strncpy ( fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length ); | ^~~~~~ /<>/libsrc2/grpattr.c:55:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 55 | strncat(fullpath, "/", length - strlen(fullpath) - 1); | ^ /<>/libsrc2/grpattr.c:58:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 58 | strncat(fullpath, path, length - strlen(fullpath) - 1); | ^ /<>/libsrc2/grpattr.c: In function ‘full_path_for_group’: /<>/libsrc2/grpattr.c:64:52: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 64 | strncpy(fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length); | ^~~~~~ /<>/libsrc2/grpattr.c:67:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 67 | strncat(fullpath, "/", length - strlen(fullpath) - 1); | ^ /<>/libsrc2/grpattr.c:70:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 70 | strncat(fullpath, path, length - strlen(fullpath) - 1); | ^ /<>/libsrc2/grpattr.c: In function ‘milist_recursion’: /<>/libsrc2/grpattr.c:124:22: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 124 | data->frame_ptr->grp_idx ); | ~~~~~~~~~~~~~~~^~~~~~~~~ /<>/libsrc2/grpattr.c:157:58: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 157 | data->frame_ptr->grp_idx - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /<>/libsrc2/grpattr.c: In function ‘milist_attr_op’: /<>/libsrc2/grpattr.c:198:44: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 198 | strncpy ( data->name_ptr, attr_name, data->name_len ); | ~~~~^~~~~~~~~~ /<>/libsrc2/grpattr.c: In function ‘milist_attr_next’: /<>/libsrc2/grpattr.c:223:49: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 223 | strncpy ( path, data->frame_ptr->relpath, maxpath ); | ^~~~~~~ /<>/libsrc2/grpattr.c: In function ‘milist_grp_next’: /<>/libsrc2/grpattr.c:314:49: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 314 | strncpy ( path, data->frame_ptr->relpath, maxpath ); | ^~~~~~~ /<>/libsrc2/grpattr.c:315:48: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 315 | strncpy ( data->frame_ptr->relpath, tmp, maxpath ); | ^~~~~~~ /<>/libsrc2/grpattr.c: In function ‘miget_attr_length’: /<>/libsrc2/grpattr.c:551:15: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 551 | *length = hdf_dims[0]; | ^~~~~~~~ /<>/libsrc2/grpattr.c: In function ‘miset_attr_values’: /<>/libsrc2/grpattr.c:906:31: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 906 | slength = strlen ( path ) - ( pch - path ); | ^ /<>/libsrc2/grpattr.c:910:41: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 910 | std_name[i] = path[pch - path + 1 + i]; | ^ [ 3%] Building C object CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o -c /<>/libsrc2/hyper.c /<>/libsrc2/hyper.c: In function ‘mirw_hyperslab_raw’: /<>/libsrc2/hyper.c:256:21: warning: conversion from ‘misize_t’ {aka ‘const long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 256 | icount[i] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:258:25: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 258 | restructure_array(ndims, buffer, icount, H5Tget_size(type_id), | ^~~~~ /<>/libsrc2/hyper.c:276:42: warning: conversion from ‘misize_t’ {aka ‘const long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 276 | icount[volume->dim_indices[i]] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:286:26: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 286 | temp_buffer=malloc(buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:294:33: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 294 | memcpy(temp_buffer,buffer,buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:296:25: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 296 | restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id), | ^~~~~ /<>/libsrc2/hyper.c: In function ‘mirw_hyperslab_icv’: /<>/libsrc2/hyper.c:433:11: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 433 | ndims = volume->number_of_dims; | ^~~~~~ /<>/libsrc2/hyper.c:445:32: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 445 | mspc_id = H5Screate_simple(ndims, hdf_count, NULL); | ^~~~~ /<>/libsrc2/hyper.c:453:44: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 453 | miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size); | ^~~~~ /<>/libsrc2/hyper.c:496:21: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 496 | slice_ndims = ndims; | ^~~~~ /<>/libsrc2/hyper.c:507:14: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 507 | for (i = slice_ndims; i < ndims; i++ ) { | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:515:57: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 515 | image_slice_max_buffer=malloc(total_number_of_slices*sizeof(double)); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:523:57: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 523 | image_slice_min_buffer=malloc(total_number_of_slices*sizeof(double)); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:661:21: warning: conversion from ‘misize_t’ {aka ‘const long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 661 | icount[i] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:663:25: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 663 | restructure_array(ndims, buffer, icount, H5Tget_size(buffer_type_id),volume->dim_indices, dir); | ^~~~~ /<>/libsrc2/hyper.c:674:42: warning: conversion from ‘misize_t’ {aka ‘const long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 674 | icount[volume->dim_indices[i]] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:677:40: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 677 | imap[volume->dim_indices[i]] = i; | ^ /<>/libsrc2/hyper.c:684:26: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 684 | temp_buffer=malloc(buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:691:33: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 691 | memcpy(temp_buffer,buffer,buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:694:27: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 694 | restructure_array(ndims, temp_buffer, icount, H5Tget_size(buffer_type_id), imap, idir); | ^~~~~ /<>/libsrc2/hyper.c: In function ‘mirw_hyperslab_normalized’: /<>/libsrc2/hyper.c:922:11: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 922 | ndims = volume->number_of_dims; | ^~~~~~ In file included from /<>/libcommon/minc2_error.h:38, from /<>/libsrc2/minc2.h:11, from /<>/libsrc2/hyper.c:16: /<>/libsrc2/hyper.c:933:50: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 933 | MI_CHECK_HDF_CALL(mspc_id = H5Screate_simple(ndims, hdf_count, NULL),"H5Screate_simple"); | ^~~~~ /<>/libcommon/minc_error.h:188:42: note: in definition of macro ‘MI_CHECK_HDF_CALL’ 188 | #define MI_CHECK_HDF_CALL(var,call) {if((var)<0) MI_LOG_ERROR(MI2_MSG_HDF5,call);} | ^~~ /<>/libsrc2/hyper.c:940:43: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 940 | miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size); | ^~~~~ /<>/libsrc2/hyper.c:941:43: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 941 | miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size); | ^~~~~ /<>/libsrc2/hyper.c:980:21: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 980 | slice_ndims = ndims; | ^~~~~ /<>/libsrc2/hyper.c:991:14: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 991 | for (i = slice_ndims; i < ndims; i++ ) { | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:999:57: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 999 | image_slice_max_buffer=malloc(total_number_of_slices*sizeof(double)); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:1000:57: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1000 | image_slice_min_buffer=malloc(total_number_of_slices*sizeof(double)); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:1052:31: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1052 | temp_buffer=(double*)malloc(buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:1103:22: warning: conversion from ‘misize_t’ {aka ‘const long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1103 | icount[i] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:1105:25: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1105 | restructure_array(ndims, buffer, icount, H5Tget_size(buffer_type_id),volume->dim_indices, dir); | ^~~~~ /<>/libsrc2/hyper.c:1116:42: warning: conversion from ‘misize_t’ {aka ‘const long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1116 | icount[volume->dim_indices[i]] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:1119:40: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 1119 | imap[volume->dim_indices[i]] = i; | ^ /<>/libsrc2/hyper.c:1125:25: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1125 | temp_buffer2=malloc(input_buffer_size); | ^~~~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:1132:32: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1132 | memcpy(temp_buffer2,buffer,input_buffer_size); | ^~~~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:1135:25: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1135 | restructure_array(ndims, temp_buffer2, icount, H5Tget_size(buffer_type_id), imap, idir); | ^~~~~ [ 3%] Building C object CMakeFiles/minc2_static.dir/libsrc2/label.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/label.c.o -c /<>/libsrc2/label.c /<>/libsrc2/label.c: In function ‘miswap4’: /<>/libsrc2/label.c:40:12: warning: conversion to ‘int’ from ‘unsigned int’ may change the sign of the result [-Wsign-conversion] 40 | return (tmp); | ^ /<>/libsrc2/label.c: In function ‘miget_label_value_by_index’: /<>/libsrc2/label.c:199:51: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 199 | result = H5Tget_member_value(volume->mtype_id,idx,value); | ^~~ [ 3%] Building C object CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o -c /<>/libsrc2/m2util.c /<>/libsrc2/m2util.c: In function ‘midownsample_slice’: /<>/libsrc2/m2util.c:1491:18: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1491 | x1 = x; | ^ /<>/libsrc2/m2util.c:1492:26: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1492 | y1 = y + ( j * scale ); | ^ /<>/libsrc2/m2util.c:1492:20: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1492 | y1 = y + ( j * scale ); | ^ /<>/libsrc2/m2util.c:1492:18: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1492 | y1 = y + ( j * scale ); | ^ /<>/libsrc2/m2util.c:1493:26: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1493 | z1 = z + ( k * scale ); | ^ /<>/libsrc2/m2util.c:1493:20: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1493 | z1 = z + ( k * scale ); | ^ /<>/libsrc2/m2util.c:1493:18: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1493 | z1 = z + ( k * scale ); | ^ /<>/libsrc2/m2util.c: In function ‘miconvert_hyperslab_to_real’: /<>/libsrc2/m2util.c:1602:46: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1602 | r = miget_slice_range ( volume, pos, volume->number_of_dims, | ~~~~~~^~~~~~~~~~~~~~~~ /<>/libsrc2/m2util.c:1627:52: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1627 | r = miget_slice_range ( volume, pos, volume->number_of_dims, | ~~~~~~^~~~~~~~~~~~~~~~ /<>/libsrc2/m2util.c: In function ‘minc_update_thumbnail’: /<>/libsrc2/m2util.c:1719:25: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1719 | osize[i] = isize[i] / scale; | ^ /<>/libsrc2/m2util.c:1779:20: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); | ^ /<>/libsrc2/m2util.c:1779:14: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); | ^~~~~ /<>/libsrc2/m2util.c:1782:15: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1782 | out_bytes = osize[1] * osize[2] * sizeof ( double ); | ^~~~~ /<>/libsrc2/m2util.c:1785:14: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1785 | count[0] = scale; | ^~~~~ /<>/libsrc2/m2util.c:1800:22: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1800 | start[0] = slice * scale; | ^ /<>/libsrc2/m2util.c:1803:16: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1803 | count[0] = scale; | ^~~~~ /<>/libsrc2/m2util.c: In function ‘alloc1d’: /<>/libsrc2/m2util.c:1914:52: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1914 | return ( ( double * ) malloc ( sizeof ( double ) * n ) ); | ^ /<>/libsrc2/m2util.c: In function ‘alloc2d’: /<>/libsrc2/m2util.c:1923:34: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1923 | mat = ( double ** ) malloc ( n * sizeof ( double * ) ); | ^ /<>/libsrc2/m2util.c:1930:38: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1930 | mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); | ^ [ 4%] Building C object CMakeFiles/minc2_static.dir/libsrc2/record.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/record.c.o -c /<>/libsrc2/record.c /<>/libsrc2/record.c: In function ‘miget_record_field_name’: /<>/libsrc2/record.c:57:50: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 57 | *name = H5Tget_member_name(volume->ftype_id, index); | ^~~~~ /<>/libsrc2/record.c: In function ‘miset_record_field_name’: /<>/libsrc2/record.c:91:20: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 91 | offset = index * H5Tget_size(ftype_id); | ^ [ 4%] Building C object CMakeFiles/minc2_static.dir/libsrc2/slice.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -c /<>/libsrc2/slice.c /<>/libsrc2/slice.c: In function ‘mirw_slice_minmax’: /<>/libsrc2/slice.c:72:11: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 72 | ndims = H5Sget_simple_extent_ndims ( fspc_id ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 5%] Building C object CMakeFiles/minc2_static.dir/libsrc2/valid.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -c /<>/libsrc2/valid.c [ 5%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -c /<>/libsrc2/volprops.c /<>/libsrc2/volprops.c: In function ‘miget_volume_props’: /<>/libsrc2/volprops.c:133:60: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 133 | handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); | ^ /<>/libsrc2/volprops.c:139:33: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 139 | handle->edge_lengths[i] = dims[i]; | ^~~~ /<>/libsrc2/volprops.c:151:43: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 151 | fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, | ^ /<>/libsrc2/volprops.c:156:34: warning: conversion to ‘int’ from ‘unsigned int’ may change the sign of the result [-Wsign-conversion] 156 | handle->zlib_level = cd_values[0]; | ^~~~~~~~~ /<>/libsrc2/volprops.c: In function ‘miset_props_blocking’: /<>/libsrc2/volprops.c:432:52: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 432 | props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); | ^ [ 6%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volume.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -c /<>/libsrc2/volume.c /<>/libsrc2/volume.c: In function ‘_hdf_open’: /<>/libsrc2/volume.c:120:117: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 120 | H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc2/volume.c:132:24: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 132 | fd = H5Fopen(path, mode, prp_id); | ^~~~ /<>/libsrc2/volume.c: In function ‘_hdf_create’: /<>/libsrc2/volume.c:224:115: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 224 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*100, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc2/volume.c:227:26: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 227 | fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ /<>/libsrc2/volume.c: In function ‘micreate_volume’: /<>/libsrc2/volume.c:634:23: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 634 | hdf_size[i] = create_props->edge_lengths[i]; | ^~~~~~~~~~~~ In file included from /<>/libcommon/minc2_error.h:38, from /<>/libsrc2/minc2.h:11, from /<>/libsrc2/volume.c:32: /<>/libsrc2/volume.c:664:72: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 664 | MI_CHECK_HDF_CALL_RET(stat = H5Pset_deflate(hdf_plist, create_props->zlib_level),"H5Pset_deflate") | ~~~~~~~~~~~~^~~~~~~~~~~~ /<>/libcommon/minc_error.h:189:46: note: in definition of macro ‘MI_CHECK_HDF_CALL_RET’ 189 | #define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);} | ^~~ /<>/libsrc2/volume.c:896:70: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 896 | handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions * | ^ In file included from /<>/libcommon/minc2_error.h:38, from /<>/libsrc2/minc2.h:11, from /<>/libsrc2/volume.c:32: /<>/libsrc2/volume.c:900:63: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 900 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM,number_of_dimensions * sizeof(midimhandle_t)); | ^ /<>/libcommon/minc_error.h:187:75: note: in definition of macro ‘MI_LOG_ERROR’ 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /<>/libsrc2/volume.c:988:73: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 988 | props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int)); | ^ /<>/libsrc2/volume.c: In function ‘_miget_irregular_spacing’: /<>/libsrc2/volume.c:1171:35: warning: conversion from ‘hssize_t’ {aka ‘long long int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1171 | hdim->offsets = malloc(n_points * sizeof(double)); | ~~~~~~~~~^~~~~~~~~~~~~~~~ /<>/libsrc2/volume.c:1195:34: warning: conversion from ‘hssize_t’ {aka ‘long long int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1195 | hdim->widths = malloc(n_points * sizeof(double)); | ~~~~~~~~~^~~~~~~~~~~~~~~~ /<>/libsrc2/volume.c: In function ‘miopen_volume’: /<>/libsrc2/volume.c:1421:62: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1421 | handle->dim_handles = (midimhandle_t *)malloc(n_dimensions * | ^ In file included from /<>/libcommon/minc2_error.h:38, from /<>/libsrc2/minc2.h:11, from /<>/libsrc2/volume.c:32: /<>/libsrc2/volume.c:1426:56: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1426 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_dimensions * sizeof(midimhandle_t)); | ^ /<>/libcommon/minc_error.h:187:75: note: in definition of macro ‘MI_LOG_ERROR’ 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /<>/libsrc2/volume.c:1509:59: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1509 | hid_t tmp_id = H5Tget_member_type(handle->ftype_id, i); | ^ /<>/libsrc2/volume.c:1510:63: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1510 | size_t tmp_off = H5Tget_member_offset(handle->ftype_id, i); | ^ /<>/libsrc2/volume.c:1511:59: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1511 | char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); | ^ In file included from /<>/libsrc2/volume.c:33: /<>/libsrc2/minc2_private.h:14:22: warning: ‘%s’ directive writing up to 127 bytes into a region of size 107 [-Wformat-overflow=] 14 | #define MI_ROOT_PATH "/minc-2.0" | ^~~~~~~~~~~ /<>/libsrc2/volume.c:1216:17: note: in expansion of macro ‘MI_ROOT_PATH’ 1216 | sprintf(path, MI_ROOT_PATH "/dimensions/%s", dimname); | ^~~~~~~~~~~~ /<>/libsrc2/volume.c:1749:53: note: format string is defined here 1749 | miset_attribute(volume, MI_ROOT_PATH "/image/0/image", "valid_range", | ^~ In file included from /usr/arm-linux-gnueabi/include/stdio.h:867, from /usr/include/hdf5/serial/H5Epublic.h:20, from /usr/include/hdf5/serial/hdf5.h:26, from /<>/libsrc2/volume.c:8: /usr/arm-linux-gnueabi/include/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 22 and 149 bytes into a destination of size 128 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 6%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -c /<>/libcommon/minc2_error.c [ 6%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -c /<>/libcommon/minc_config.c /<>/libcommon/minc_config.c: In function ‘miread_cfg’: /<>/libcommon/minc_config.c:84:42: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 84 | strncpy(buffer, tmp, maxlen); | ^~~~~~ [ 7%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -c /<>/libcommon/minc_error.c [ 7%] Building C object CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o -c /<>/libcommon/ParseArgv.c /<>/libcommon/ParseArgv.c: In function ‘PrintUsage’: /<>/libcommon/ParseArgv.c:439:32: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 439 | numSpaces = width + 1 - strlen(infoPtr->key); | ^ /<>/libcommon/ParseArgv.c:439:22: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 439 | numSpaces = width + 1 - strlen(infoPtr->key); | ^~~~~ [ 8%] Building C object CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o -c /<>/libcommon/read_file_names.c /<>/libcommon/read_file_names.c: In function ‘read_file_names’: /<>/libcommon/read_file_names.c:53:34: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 53 | files = malloc(sizeof(*files) * array_size); | ^ /<>/libcommon/read_file_names.c:76:48: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 76 | files = realloc(files, sizeof(*files) * array_size); | ^ [ 8%] Building C object CMakeFiles/minc2_static.dir/libcommon/restructure.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/restructure.c.o -c /<>/libcommon/restructure.c /<>/libcommon/restructure.c: In function ‘restructure_array’: /<>/libcommon/restructure.c:134:21: warning: unsigned conversion from ‘int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘-1’ to ‘4294967295’ [-Wsign-conversion] 134 | offset_next = -1; /* Initialize. */ | ^ /<>/libcommon/restructure.c:64:40: warning: conversion from ‘int’ to ‘unsigned char’ may change value [-Wconversion] 64 | #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) | ^ /<>/libcommon/restructure.c:150:7: note: in expansion of macro ‘BIT_SET’ 150 | BIT_SET(bitmap, offset_start); | ^~~~~~~ /<>/libcommon/restructure.c:64:40: warning: conversion from ‘int’ to ‘unsigned char’ may change value [-Wconversion] 64 | #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) | ^ /<>/libcommon/restructure.c:204:11: note: in expansion of macro ‘BIT_SET’ 204 | BIT_SET(bitmap, offset_next); | ^~~~~~~ [ 9%] Building C object CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o -c /<>/libcommon/time_stamp.c [ 9%] Building C object CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o -c /<>/libsrc/dim_conversion.c In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/dim_conversion.c:93: /<>/libsrc/dim_conversion.c: In function ‘MI_icv_dimconvert’: /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:161:37: note: in expansion of macro ‘ROUND’ 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:166:35: note: in expansion of macro ‘ROUND’ 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:175:38: note: in expansion of macro ‘ROUND’ 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:180:36: note: in expansion of macro ‘ROUND’ 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:189:36: note: in expansion of macro ‘ROUND’ 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:194:34: note: in expansion of macro ‘ROUND’ 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:123:23: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/minc_basic.h:200:26: note: in expansion of macro ‘MIN’ 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:161:37: note: in expansion of macro ‘ROUND’ 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:166:35: note: in expansion of macro ‘ROUND’ 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:175:38: note: in expansion of macro ‘ROUND’ 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:180:36: note: in expansion of macro ‘ROUND’ 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:189:36: note: in expansion of macro ‘ROUND’ 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:194:34: note: in expansion of macro ‘ROUND’ 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:123:23: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/minc_basic.h:200:26: note: in expansion of macro ‘MIN’ 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ [ 10%] Building C object CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -c /<>/libsrc/image_conversion.c /<>/libsrc/image_conversion.c: In function ‘miicv_setdbl’: /<>/libsrc/image_conversion.c:399:29: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 399 | icvp->user_do_range = value; | ^~~~~ /<>/libsrc/image_conversion.c:408:28: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 408 | icvp->user_do_norm = value; | ^~~~~ /<>/libsrc/image_conversion.c:411:30: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 411 | icvp->user_user_norm = value; | ^~~~~ /<>/libsrc/image_conversion.c:420:33: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 420 | icvp->user_do_fillvalue = value; | ^~~~~ /<>/libsrc/image_conversion.c:426:31: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 426 | icvp->user_do_dimconv = value; | ^~~~~ /<>/libsrc/image_conversion.c:429:30: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 429 | icvp->user_do_scalar = value; | ^~~~~ /<>/libsrc/image_conversion.c:432:14: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 432 | ival = value; | ^~~~~ /<>/libsrc/image_conversion.c:437:14: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 437 | ival = value; | ^~~~~ /<>/libsrc/image_conversion.c:442:14: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 442 | ival = value; | ^~~~~ /<>/libsrc/image_conversion.c:447:14: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 447 | ival = value; | ^~~~~ /<>/libsrc/image_conversion.c:455:32: warning: conversion from ‘double’ to ‘long int’ may change value [-Wfloat-conversion] 455 | icvp->user_dim_size[0] = value; | ^~~~~ /<>/libsrc/image_conversion.c:458:32: warning: conversion from ‘double’ to ‘long int’ may change value [-Wfloat-conversion] 458 | icvp->user_dim_size[1] = value; | ^~~~~ /<>/libsrc/image_conversion.c:461:32: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 461 | icvp->user_keep_aspect = value; | ^~~~~ /<>/libsrc/image_conversion.c:475:38: warning: conversion from ‘double’ to ‘long int’ may change value [-Wfloat-conversion] 475 | icvp->user_dim_size[idim] = value; | ^~~~~ /<>/libsrc/image_conversion.c: In function ‘miicv_inqint’: /<>/libsrc/image_conversion.c:774:13: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 774 | *value = dvalue; | ^~~~~~ /<>/libsrc/image_conversion.c: In function ‘miicv_inqlong’: /<>/libsrc/image_conversion.c:803:13: warning: conversion from ‘double’ to ‘long int’ may change value [-Wfloat-conversion] 803 | *value = dvalue; | ^~~~~~ In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/image_conversion.c:173: /<>/libsrc/image_conversion.c: In function ‘MI_icv_zero_buffer’: /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:161:37: note: in expansion of macro ‘ROUND’ 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:166:35: note: in expansion of macro ‘ROUND’ 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:175:38: note: in expansion of macro ‘ROUND’ 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:180:36: note: in expansion of macro ‘ROUND’ 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:189:36: note: in expansion of macro ‘ROUND’ 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:194:34: note: in expansion of macro ‘ROUND’ 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:123:23: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/minc_basic.h:200:26: note: in expansion of macro ‘MIN’ 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ [ 10%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o -c /<>/libsrc/minc_convenience.c /<>/libsrc/minc_convenience.c: In function ‘miset_valid_range’: /<>/libsrc/minc_convenience.c:430:17: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 430 | fval[0] = valid_range[0]; | ^~~~~~~~~~~ /<>/libsrc/minc_convenience.c:431:17: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 431 | fval[1] = valid_range[1]; | ^~~~~~~~~~~ /<>/libsrc/minc_convenience.c: In function ‘miattput_pointer’: /<>/libsrc/minc_convenience.c:638:10: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 638 | index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX)); | ^~~~~~ In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/minc_convenience.c:152: /<>/libsrc/minc_convenience.c: In function ‘miadd_child’: /<>/libsrc/minc_convenience.c:743:56: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 743 | if ((child_list = MALLOC(child_list_size+MAX_NC_NAME+ | ^ /<>/libsrc/minc_useful.h:138:39: note: in definition of macro ‘MALLOC’ 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) | ^~~~~~~ In file included from /<>/libsrc/minc_private.h:89, from /<>/libsrc/minc_convenience.c:152: /<>/libsrc/minc_convenience.c:746:49: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 746 | child_list_size+MAX_NC_NAME+strlen(MI_CHILD_SEPARATOR)); | ^ /<>/libcommon/minc_error.h:187:75: note: in definition of macro ‘MI_LOG_ERROR’ 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /<>/libsrc/minc_convenience.c:765:23: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 765 | child_list_size += strlen(MI_CHILD_SEPARATOR); | ^~ /<>/libsrc/minc_convenience.c:765:26: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 765 | child_list_size += strlen(MI_CHILD_SEPARATOR); | ^~~~~~ /<>/libsrc/minc_convenience.c:780:23: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); | ^~ /<>/libsrc/minc_convenience.c:780:26: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); | ^~~~~~ /<>/libsrc/minc_convenience.c: In function ‘miappend_history’: /<>/libsrc/minc_convenience.c:1378:30: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1378 | att_val = malloc(att_len + strlen(tm_stamp) + 2); | ^ [ 10%] Building C object CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -c /<>/libsrc/nd_loop.c [ 11%] Building C object CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -c /<>/libsrc/netcdf_convenience.c In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/netcdf_convenience.c:182: /<>/libsrc/netcdf_convenience.c: In function ‘miexpand_file’: /<>/libsrc/netcdf_convenience.c:380:38: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 380 | compfile = MALLOC(strlen(path) + max_compression_code_length + 2, char); | ^ /<>/libsrc/minc_useful.h:138:39: note: in definition of macro ‘MALLOC’ 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) | ^~~~~~~ /<>/libsrc/netcdf_convenience.c: In function ‘miattputstr’: /<>/libsrc/netcdf_convenience.c:1033:38: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 1033 | strlen(value) + 1, value); | ~~~~~~~~~~~~~~^~~ [ 11%] Building C object CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -c /<>/libsrc/value_conversion.c /<>/libsrc/value_conversion.c: In function ‘MI_convert_type’: /<>/libsrc/value_conversion.c:622:49: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 622 | (size_t) number_of_values*inincr); | ^ In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/value_conversion.c:98: /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:161:37: note: in expansion of macro ‘ROUND’ 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:166:35: note: in expansion of macro ‘ROUND’ 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:175:38: note: in expansion of macro ‘ROUND’ 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:180:36: note: in expansion of macro ‘ROUND’ 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:189:36: note: in expansion of macro ‘ROUND’ 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:194:34: note: in expansion of macro ‘ROUND’ 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:123:23: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/minc_basic.h:200:26: note: in expansion of macro ‘MIN’ 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ [ 12%] Building C object CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o -c /<>/libsrc/voxel_loop.c /<>/libsrc/voxel_loop.c: In function ‘update_history’: /<>/libsrc/voxel_loop.c:1182:15: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1182 | att_length += strlen(arg_string) + 1; | ^~ /<>/libsrc/voxel_loop.c:1182:18: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 1182 | att_length += strlen(arg_string) + 1; | ^~~~~~ [ 12%] Building C object CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -c /<>/libsrc/hdf_convenience.c /<>/libsrc/hdf_convenience.c: In function ‘hdf_var_add’: /<>/libsrc/hdf_convenience.c:202:59: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 202 | new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims); | ^ In file included from /<>/libsrc/minc_private.h:89, from /<>/libsrc/hdf_convenience.c:8: /<>/libsrc/hdf_convenience.c:209:59: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 209 | MI_LOG_ERROR(MI_MSG_OUTOFMEM, sizeof(hsize_t) * ndims); | ^ /<>/libcommon/minc_error.h:187:75: note: in definition of macro ‘MI_LOG_ERROR’ 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_size’: /<>/libsrc/hdf_convenience.c:370:20: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 370 | int typ_size = H5Tget_size(typ_id); | ^~~~~~~~~~~ /<>/libsrc/hdf_convenience.c:371:20: warning: conversion from ‘hssize_t’ {aka ‘long long int’} to ‘int’ may change value [-Wconversion] 371 | int spc_size = H5Sget_simple_extent_npoints(spc_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_attname’: /<>/libsrc/hdf_convenience.c:455:38: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 455 | att_id = H5Aopen_idx(loc_id, attnum); | ^~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_attinq’: /<>/libsrc/hdf_convenience.c:578:25: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 578 | *length_ptr = typ_size; | ^~~~~~~~ /<>/libsrc/hdf_convenience.c:581:25: warning: conversion from ‘hssize_t’ {aka ‘long long int’} to ‘int’ may change value [-Wconversion] 581 | *length_ptr = H5Sget_simple_extent_npoints(spc_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_get_dimorder’: /<>/libsrc/hdf_convenience.c:667:14: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 667 | length = H5Tget_size(typ_id); | ^~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_dimdef’: /<>/libsrc/hdf_convenience.c:958:49: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 958 | hdf_set_length(var->dset_id, dimnm, length); | ^~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_attput’: /<>/libsrc/hdf_convenience.c:1147:30: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1147 | H5Tset_size(ftyp_id, val_len); | ^~~~~~~ /<>/libsrc/hdf_convenience.c:1185:33: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1185 | hsize_t temp_size = val_len; | ^~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_vardef’: /<>/libsrc/hdf_convenience.c:1322:19: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1322 | dims[i] = length; | ^~~~~~ /<>/libsrc/hdf_convenience.c:1369:60: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1369 | if( MI_MAX_VAR_BUFFER_SIZE > dims[i] * val * unit_size ) { | ^ In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/hdf_convenience.c:8: /<>/libsrc/hdf_convenience.c:1373:81: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1373 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); | ^ /<>/libsrc/minc_useful.h:123:34: note: in definition of macro ‘MIN’ 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/hdf_convenience.c:1373:81: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1373 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); | ^ /<>/libsrc/minc_useful.h:123:47: note: in definition of macro ‘MIN’ 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/hdf_convenience.c:1381:38: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1381 | chkdims[i] = chunk_length; | ^~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c:1386:36: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1386 | H5Pset_deflate(prp_id, comp_level); | ^~~~~~~~~~ /<>/libsrc/hdf_convenience.c:1418:42: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 1418 | hdf_set_length(dst_id, varnm, dim->length); | ~~~^~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_varget’: /<>/libsrc/hdf_convenience.c:1534:19: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1534 | fstart[i] = start_ptr[i]; | ^~~~~~~~~ /<>/libsrc/hdf_convenience.c:1535:18: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1535 | count[i] = length_ptr[i]; | ^~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_varputg’: /<>/libsrc/hdf_convenience.c:1633:45: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1633 | mystart = (hsize_t *)calloc(varp->ndims * 7, sizeof(hsize_t)); | ~~~~~~~~~~~~^~~ /<>/libsrc/hdf_convenience.c:1649:18: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1649 | mystart[idim] = start != NULL ? start[idim] : 0; | ^~~~~ /<>/libsrc/hdf_convenience.c:1658:22: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1658 | myedges[idim] = edges[idim]; | ^~~~~ /<>/libsrc/hdf_convenience.c:1682:29: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘ptrdiff_t’ {aka ‘int’} may change the sign of the result [-Wsign-conversion] 1682 | length[idim] = mymap[idim] * myedges[idim]; | ^ /<>/libsrc/hdf_convenience.c:1683:45: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘ptrdiff_t’ {aka ‘int’} may change the sign of the result [-Wsign-conversion] 1683 | stop[idim] = mystart[idim] + myedges[idim] * mystride[idim]; | ^ /<>/libsrc/hdf_convenience.c:1740:16: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘ptrdiff_t’ {aka ‘int’} may change the sign of the result [-Wsign-conversion] 1740 | mystart[idim] += mystride[idim]; | ^~ /<>/libsrc/hdf_convenience.c:1742:22: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1742 | mystart[idim] = start[idim]; | ^~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_vargetg’: /<>/libsrc/hdf_convenience.c:1810:42: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1810 | mystart = (long *)calloc(varp->ndims * 7, sizeof(long)); | ~~~~~~~~~~~~^~~ /<>/libsrc/hdf_convenience.c:1837:39: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1837 | myedges[idim] = varp->dims[idim] - mystart[idim]; | ^ /<>/libsrc/hdf_convenience.c:1837:22: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘long int’ may change value [-Wconversion] 1837 | myedges[idim] = varp->dims[idim] - mystart[idim]; | ^~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_varput’: /<>/libsrc/hdf_convenience.c:1957:19: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1957 | fstart[i] = start_ptr[i]; | ^~~~~~~~~ /<>/libsrc/hdf_convenience.c:1958:18: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1958 | count[i] = length_ptr[i]; | ^~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_varsize’: /<>/libsrc/hdf_convenience.c:2069:23: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘long int’ may change value [-Wconversion] 2069 | size_ptr[i] = dims[i]; | ^~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_copy_attr’: /<>/libsrc/hdf_convenience.c:2103:26: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2103 | if ((val_ptr = malloc(hdf_size(spc_id, typ_id))) == NULL) | ^~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_open’: /<>/libsrc/hdf_convenience.c:2223:117: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2223 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c:2239:33: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2239 | file_id = H5Fopen(path, mode, fpid); | ^~~~ /<>/libsrc/hdf_convenience.c:2249:25: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2249 | file->wr_ok = (mode & H5F_ACC_RDWR) != 0; | ^ /<>/libsrc/hdf_convenience.c:2271:37: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2271 | dims[ndims++] = H5Tget_nmembers(type_id); | ^~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_create’: /<>/libsrc/hdf_convenience.c:2331:117: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2331 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c:2347:35: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2347 | file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ [ 13%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o -c /<>/libsrc/minc_compat.c /<>/libsrc/minc_compat.c: In function ‘MI2attcopy’: /<>/libsrc/minc_compat.c:307:51: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 307 | val_ptr = malloc(MI2typelen(att_type) * att_length); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 13%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o -c /<>/libsrc/minc_simple.c /<>/libsrc/minc_simple.c: In function ‘minc_load_data’: /<>/libsrc/minc_simple.c:393:27: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 393 | ucount[j++] = dim_len[i]; | ^~~~~~~ /<>/libsrc/minc_simple.c:397:23: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), | ^~~~~~~~~ In file included from /<>/libsrc/minc.h:172, from /<>/libsrc/minc_private.h:83, from /<>/libsrc/minc_simple.c:38: /<>/libsrc/minc_compat.h:67:19: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 67 | #define nctypelen MI2typelen /<>/libsrc/minc_simple.c:397:51: note: in expansion of macro ‘nctypelen’ 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), | ^~~~~~~~~ /<>/libsrc/minc_simple.c:416:77: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 416 | p_file->file_atts = (struct att_info *) malloc(sizeof (struct att_info) * | ^ /<>/libsrc/minc_simple.c:419:77: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 419 | p_file->file_vars = (struct var_info *) malloc(sizeof (struct var_info) * | ^ /<>/libsrc/minc_simple.c:431:48: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 431 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/minc_simple.c:446:51: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 446 | p_var->var_atts = malloc(p_var->var_natts * | ^ /<>/libsrc/minc_simple.c:462:52: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 462 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 14%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -c /<>/libsrc/minc_format_convert.c [ 14%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o -c /<>/volume_io/Geometry/colour.c [ 14%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -c /<>/volume_io/Geometry/colour_def.c [ 15%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -c /<>/volume_io/Geometry/gaussian.c [ 15%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o -c /<>/volume_io/Geometry/inverse.c [ 16%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o -c /<>/volume_io/Geometry/newton.c [ 16%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -c /<>/volume_io/Geometry/points.c [ 17%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -c /<>/volume_io/Geometry/splines.c [ 17%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -c /<>/volume_io/Geometry/tensors.c [ 18%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o -c /<>/volume_io/Geometry/transforms.c [ 18%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /<>/volume_io/MNI_formats/gen_xf_io.c /<>/volume_io/MNI_formats/gen_xf_io.c: In function ‘output_one_transform’: /<>/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 184 | volume_filename = alloc_string( string_length(prefix_filename) + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 185 | 100 ); | ~~~ [ 18%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o -c /<>/volume_io/MNI_formats/gen_xfs.c [ 19%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o -c /<>/volume_io/MNI_formats/grid_transforms.c [ 19%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -c /<>/volume_io/MNI_formats/mni_io.c [ 20%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -c /<>/volume_io/MNI_formats/tag_points.c [ 20%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /<>/volume_io/MNI_formats/thin_plate_spline.c [ 21%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o -c /<>/volume_io/Prog_utils/alloc.c /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_in_bytes’: /<>/volume_io/Prog_utils/alloc.c:247:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 247 | print_error( "Cannot alloc 1D array of %lu bytes.\n", n_bytes ); | ~~^ ~~~~~~~ | | | | | size_t {aka unsigned int} | long unsigned int | %u /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_1d’: /<>/volume_io/Prog_utils/alloc.c:286:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 286 | print_error( "Cannot alloc 1D array of %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 287 | n_elements, type_size ); | ~~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:286:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 286 | print_error( "Cannot alloc 1D array of %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 287 | n_elements, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_2d’: /<>/volume_io/Prog_utils/alloc.c:329:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 329 | print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 330 | n1, n2, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:329:57: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 329 | print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 330 | n1, n2, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:329:73: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 329 | print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 330 | n1, n2, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_3d’: /<>/volume_io/Prog_utils/alloc.c:377:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 377 | print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 378 | n1, n2, n3, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:377:57: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 377 | print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 378 | n1, n2, n3, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:377:64: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 377 | print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 378 | n1, n2, n3, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:377:80: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 377 | print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 378 | n1, n2, n3, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_4d’: /<>/volume_io/Prog_utils/alloc.c:430:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:430:57: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:430:64: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:430:71: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:430:87: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_5d’: /<>/volume_io/Prog_utils/alloc.c:486:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:57: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:64: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:71: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:78: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:94: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘realloc_memory’: /<>/volume_io/Prog_utils/alloc.c:544:46: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 544 | print_error( "Error reallocing %lu elements of size %lu.\n", | ~~^ | | | long unsigned int | %u 545 | n_elements, type_size ); | ~~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:544:67: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 544 | print_error( "Error reallocing %lu elements of size %lu.\n", | ~~^ | | | long unsigned int | %u 545 | n_elements, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:558:76: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 558 | print_error("Error: tried to realloc invalid number of elements, %lu.\n", | ~~^ | | | long unsigned int | %u 559 | n_elements ); | ~~~~~~~~~~ | | | size_t {aka unsigned int} [ 21%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -c /<>/volume_io/Prog_utils/alloc_check.c [ 21%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o -c /<>/volume_io/Prog_utils/arrays.c [ 22%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -c /<>/volume_io/Prog_utils/files.c /<>/volume_io/Prog_utils/files.c: In function ‘extract_directory’: /<>/volume_io/Prog_utils/files.c:1249:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1249 | directory = alloc_string( slash_index ); | ^~~~~~~~~~~ /<>/volume_io/Prog_utils/files.c: In function ‘input_binary_data’: /<>/volume_io/Prog_utils/files.c:1746:58: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 1746 | print_error( " (%d out of %d items of size %ld). ", n_done, n, | ~~^ | | | long int | %d 1747 | element_size ); | ~~~~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/files.c: In function ‘output_binary_data’: /<>/volume_io/Prog_utils/files.c:1786:58: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 1786 | print_error( " (%d out of %d items of size %ld). ", n_done, n, | ~~^ | | | long int | %d 1787 | element_size ); | ~~~~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/files.c: In function ‘io_quoted_string’: /<>/volume_io/Prog_utils/files.c:2445:34: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2445 | *str = alloc_string( length ); | ^~~~~~ [ 22%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o -c /<>/volume_io/Prog_utils/print.c [ 23%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o -c /<>/volume_io/Prog_utils/progress.c [ 23%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o -c /<>/volume_io/Prog_utils/string.c /<>/volume_io/Prog_utils/string.c: In function ‘create_string’: /<>/volume_io/Prog_utils/string.c:40:25: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 40 | str = alloc_string( string_length(initial) ); | ^~~~~~~~~~~~~~~~~~~~~~ /<>/volume_io/Prog_utils/string.c: In function ‘strip_outer_blanks’: /<>/volume_io/Prog_utils/string.c:235:63: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 235 | stripped = alloc_string( last_non_blank - first_non_blank + 1 ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ [ 24%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -c /<>/volume_io/Prog_utils/time.c [ 24%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -c /<>/volume_io/Volumes/evaluate.c /<>/volume_io/Volumes/evaluate.c: In function ‘trilinear_interpolate_rgb’: /<>/volume_io/Volumes/evaluate.c:257:24: warning: conversion from ‘VIO_Real’ {aka ‘double’} to ‘unsigned int’ may change value [-Wfloat-conversion] 257 | coefs[c] = outside_value; | ^~~~~~~~~~~~~ /<>/volume_io/Volumes/evaluate.c:305:20: warning: conversion from ‘VIO_Real’ {aka ‘double’} to ‘int’ may change value [-Wfloat-conversion] 305 | out_rgb[i] = c0 + w * dw; | ^~ [ 25%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o -c /<>/volume_io/Volumes/get_hyperslab.c [ 25%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -c /<>/volume_io/Volumes/input_free.c [ 25%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -c /<>/volume_io/Volumes/input_mnc.c /<>/volume_io/Volumes/input_mnc.c: In function ‘initialize_minc_input_from_minc_id’: /<>/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 373 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /<>/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 374 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ [ 26%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -c /<>/volume_io/Volumes/input_volume.c [ 26%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -c /<>/volume_io/Volumes/multidim_arrays.c [ 27%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -c /<>/volume_io/Volumes/output_mnc.c /<>/volume_io/Volumes/output_mnc.c: In function ‘add_minc_history’: /<>/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 779 | new_history = alloc_string( old_att_length ); | ^~~~~~~~~~~~~~ [ 27%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -c /<>/volume_io/Volumes/output_volume.c [ 28%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -c /<>/volume_io/Volumes/set_hyperslab.c [ 28%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o -c /<>/volume_io/Volumes/volume_cache.c [ 29%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o -c /<>/volume_io/Volumes/volumes.c /<>/volume_io/Volumes/volumes.c: In function ‘copy_volume_definition_no_alloc’: /<>/volume_io/Volumes/volumes.c:2630:60: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2630 | VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); | ^ /<>/volume_io/Volumes/volumes.c:2631:60: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2631 | VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]); | ^ /<>/volume_io/Volumes/volumes.c: In function ‘copy_volume_new_type’: /<>/volume_io/Volumes/volumes.c:2819:44: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 2819 | ((signed char *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2823:46: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 2823 | ((unsigned char *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2829:45: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 2829 | ((signed short *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2833:47: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 2833 | ((unsigned short *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2839:43: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 2839 | ((signed int *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2843:45: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 2843 | ((unsigned int *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2847:34: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 2847 | ((float *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c: In function ‘set_volume_irregular_starts’: /<>/volume_io/Volumes/volumes.c:2942:51: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 2942 | volume->irregular_starts[idim] = malloc(count * sizeof (VIO_Real)); | ^ /<>/volume_io/Volumes/volumes.c: In function ‘set_volume_irregular_widths’: /<>/volume_io/Volumes/volumes.c:2975:51: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 2975 | volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); | ^ [ 29%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -c /<>/volume_io/Volumes/input_mnc2.c /<>/volume_io/Volumes/input_mnc2.c: In function ‘initialize_minc_input_from_minc2_id’: /<>/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 144 | miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:145:63: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 145 | miget_dimension_separations(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_step); | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:146:58: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 146 | miget_dimension_starts(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_start); | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:153:32: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘long int’ may change value [-Wconversion] 153 | file->sizes_in_file[d] = dimension_size[d]; | ^~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:179:21: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 179 | slices_count*=dimension_size[d]; | ^~ /<>/volume_io/Volumes/input_mnc2.c:179:23: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 179 | slices_count*=dimension_size[d]; | ^~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:181:38: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 181 | slice_start=(misize_t *)calloc(n_slice_dimensions,sizeof(misize_t)); | ^~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:182:51: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 182 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&volume_max,&volume_min); | ^~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:203:55: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 203 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&slice_max,&slice_min); | ^~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:372:51: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 372 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /<>/volume_io/Volumes/input_mnc2.c:373:51: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 373 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /<>/volume_io/Volumes/input_mnc2.c: In function ‘input_minc2_hyperslab’: /<>/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 707 | used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; | ^~~~ [ 29%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -c /<>/volume_io/Volumes/output_mnc2.c /<>/volume_io/Volumes/output_mnc2.c: In function ‘output_minc2_hyperslab’: /<>/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 875 | long_file_start[file_ind] = (long) file_start[file_ind]; | ^ /<>/volume_io/Volumes/output_mnc2.c:876:37: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 876 | long_file_count[file_ind] = (long) file_count[file_ind]; | ^ /<>/volume_io/Volumes/output_mnc2.c: In function ‘output_the_volume2’: /<>/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1246 | miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); | ~~~~^~~~~~~~~~~~~~~~~~~ [ 30%] Linking C static library libminc2_static.a /usr/bin/cmake -P CMakeFiles/minc2_static.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2_static.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-ar qc libminc2_static.a CMakeFiles/minc2_static.dir/libsrc2/convert.c.o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o CMakeFiles/minc2_static.dir/libsrc2/free.c.o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o CMakeFiles/minc2_static.dir/libsrc2/label.c.o CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o CMakeFiles/minc2_static.dir/libsrc2/record.c.o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o CMakeFiles/minc2_static.dir/libcommon/restructure.c.o CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o /usr/bin/arm-linux-gnueabi-ranlib libminc2_static.a make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 30%] Built target minc2_static make -f CMakeFiles/minc2.dir/build.make CMakeFiles/minc2.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/CMakeFiles/minc2.dir/DependInfo.cmake --color= Scanning dependencies of target minc2 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f CMakeFiles/minc2.dir/build.make CMakeFiles/minc2.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 31%] Building C object CMakeFiles/minc2.dir/libsrc2/convert.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/convert.c.o -c /<>/libsrc2/convert.c /<>/libsrc2/convert.c: In function ‘miconvert_voxel_to_real’: /<>/libsrc2/convert.c:107:39: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 107 | miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); | ^~~~~~~ /<>/libsrc2/convert.c: In function ‘miset_real_value’: /<>/libsrc2/convert.c:256:45: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 256 | miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); | ^~~~~ /<>/libsrc2/convert.c: In function ‘miget_volume_real_range’: /<>/libsrc2/convert.c:528:23: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 528 | buffer = malloc(n * sizeof(double)); | ^ /<>/libsrc2/convert.c:554:23: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 554 | buffer = malloc(n * sizeof(double)); | ^ [ 31%] Building C object CMakeFiles/minc2.dir/libsrc2/datatype.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/datatype.c.o -c /<>/libsrc2/datatype.c [ 32%] Building C object CMakeFiles/minc2.dir/libsrc2/dimension.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/dimension.c.o -c /<>/libsrc2/dimension.c /<>/libsrc2/dimension.c: In function ‘micopy_dimension’: /<>/libsrc2/dimension.c:99:61: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 99 | handle->offsets = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/libsrc2/dimension.c:135:60: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 135 | handle->widths = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/libsrc2/dimension.c: In function ‘micreate_dimension’: /<>/libsrc2/dimension.c:288:51: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 288 | handle->widths = ( double * ) malloc ( length * sizeof ( double ) ); | ~~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/libsrc2/dimension.c: In function ‘miget_volume_dimensions’: /<>/libsrc2/dimension.c:417:20: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 417 | number_of_dims = volume->number_of_dims; | ^~~~~~ /<>/libsrc2/dimension.c:422:16: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 422 | max_dims = array_length; | ^~~~~~~~~~~~ /<>/libsrc2/dimension.c: In function ‘miset_apparent_dimension_order’: /<>/libsrc2/dimension.c:486:69: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 486 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); | ^ /<>/libsrc2/dimension.c: In function ‘miset_apparent_dimension_order_by_name’: /<>/libsrc2/dimension.c:580:69: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 580 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); | ^ /<>/libsrc2/dimension.c: In function ‘miget_dimension_offsets’: /<>/libsrc2/dimension.c:1036:43: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 1036 | offsets[j] = dimension->start + ( i * dimension->step ); | ^ /<>/libsrc2/dimension.c: In function ‘miset_dimension_offsets’: /<>/libsrc2/dimension.c:1083:47: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1083 | ( double * ) malloc ( dimension->length * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/libsrc2/dimension.c: In function ‘miset_dimension_sampling_flag’: /<>/libsrc2/dimension.c:1136:21: warning: unsigned conversion from ‘int’ to ‘midimattr_t’ {aka ‘unsigned int’} changes value from ‘-2’ to ‘4294967294’ [-Wsign-conversion] 1136 | dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; | ^~ /<>/libsrc2/dimension.c:1138:21: warning: unsigned conversion from ‘int’ to ‘midimattr_t’ {aka ‘unsigned int’} changes value from ‘-3’ to ‘4294967293’ [-Wsign-conversion] 1138 | dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; | ^~ /<>/libsrc2/dimension.c: In function ‘miget_dimension_start’: /<>/libsrc2/dimension.c:1356:57: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 1356 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /<>/libsrc2/dimension.c:1362:61: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 1362 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /<>/libsrc2/dimension.c:1369:63: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 1369 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /<>/libsrc2/dimension.c: In function ‘miset_dimension_widths’: /<>/libsrc2/dimension.c:1651:65: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1651 | dimension->widths = ( double * ) malloc ( dimension->length * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ [ 32%] Building C object CMakeFiles/minc2.dir/libsrc2/free.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/free.c.o -c /<>/libsrc2/free.c [ 32%] Building C object CMakeFiles/minc2.dir/libsrc2/grpattr.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/grpattr.c.o -c /<>/libsrc2/grpattr.c /<>/libsrc2/grpattr.c: In function ‘full_path_for_attr’: /<>/libsrc2/grpattr.c:41:24: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 41 | snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", | ^~~~~~ /<>/libsrc2/grpattr.c:48:46: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 48 | strncpy ( fullpath, MI_ROOT_PATH "/" , length ); | ^~~~~~ /<>/libsrc2/grpattr.c:50:58: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 50 | strncpy ( fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length ); | ^~~~~~ /<>/libsrc2/grpattr.c:55:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 55 | strncat(fullpath, "/", length - strlen(fullpath) - 1); | ^ /<>/libsrc2/grpattr.c:58:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 58 | strncat(fullpath, path, length - strlen(fullpath) - 1); | ^ /<>/libsrc2/grpattr.c: In function ‘full_path_for_group’: /<>/libsrc2/grpattr.c:64:52: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 64 | strncpy(fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length); | ^~~~~~ /<>/libsrc2/grpattr.c:67:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 67 | strncat(fullpath, "/", length - strlen(fullpath) - 1); | ^ /<>/libsrc2/grpattr.c:70:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 70 | strncat(fullpath, path, length - strlen(fullpath) - 1); | ^ /<>/libsrc2/grpattr.c: In function ‘milist_recursion’: /<>/libsrc2/grpattr.c:124:22: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 124 | data->frame_ptr->grp_idx ); | ~~~~~~~~~~~~~~~^~~~~~~~~ /<>/libsrc2/grpattr.c:157:58: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 157 | data->frame_ptr->grp_idx - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /<>/libsrc2/grpattr.c: In function ‘milist_attr_op’: /<>/libsrc2/grpattr.c:198:44: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 198 | strncpy ( data->name_ptr, attr_name, data->name_len ); | ~~~~^~~~~~~~~~ /<>/libsrc2/grpattr.c: In function ‘milist_attr_next’: /<>/libsrc2/grpattr.c:223:49: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 223 | strncpy ( path, data->frame_ptr->relpath, maxpath ); | ^~~~~~~ /<>/libsrc2/grpattr.c: In function ‘milist_grp_next’: /<>/libsrc2/grpattr.c:314:49: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 314 | strncpy ( path, data->frame_ptr->relpath, maxpath ); | ^~~~~~~ /<>/libsrc2/grpattr.c:315:48: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 315 | strncpy ( data->frame_ptr->relpath, tmp, maxpath ); | ^~~~~~~ /<>/libsrc2/grpattr.c: In function ‘miget_attr_length’: /<>/libsrc2/grpattr.c:551:15: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 551 | *length = hdf_dims[0]; | ^~~~~~~~ /<>/libsrc2/grpattr.c: In function ‘miset_attr_values’: /<>/libsrc2/grpattr.c:906:31: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 906 | slength = strlen ( path ) - ( pch - path ); | ^ /<>/libsrc2/grpattr.c:910:41: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 910 | std_name[i] = path[pch - path + 1 + i]; | ^ [ 33%] Building C object CMakeFiles/minc2.dir/libsrc2/hyper.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/hyper.c.o -c /<>/libsrc2/hyper.c /<>/libsrc2/hyper.c: In function ‘mirw_hyperslab_raw’: /<>/libsrc2/hyper.c:256:21: warning: conversion from ‘misize_t’ {aka ‘const long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 256 | icount[i] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:258:25: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 258 | restructure_array(ndims, buffer, icount, H5Tget_size(type_id), | ^~~~~ /<>/libsrc2/hyper.c:276:42: warning: conversion from ‘misize_t’ {aka ‘const long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 276 | icount[volume->dim_indices[i]] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:286:26: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 286 | temp_buffer=malloc(buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:294:33: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 294 | memcpy(temp_buffer,buffer,buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:296:25: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 296 | restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id), | ^~~~~ /<>/libsrc2/hyper.c: In function ‘mirw_hyperslab_icv’: /<>/libsrc2/hyper.c:433:11: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 433 | ndims = volume->number_of_dims; | ^~~~~~ /<>/libsrc2/hyper.c:445:32: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 445 | mspc_id = H5Screate_simple(ndims, hdf_count, NULL); | ^~~~~ /<>/libsrc2/hyper.c:453:44: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 453 | miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size); | ^~~~~ /<>/libsrc2/hyper.c:496:21: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 496 | slice_ndims = ndims; | ^~~~~ /<>/libsrc2/hyper.c:507:14: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 507 | for (i = slice_ndims; i < ndims; i++ ) { | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:515:57: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 515 | image_slice_max_buffer=malloc(total_number_of_slices*sizeof(double)); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:523:57: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 523 | image_slice_min_buffer=malloc(total_number_of_slices*sizeof(double)); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:661:21: warning: conversion from ‘misize_t’ {aka ‘const long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 661 | icount[i] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:663:25: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 663 | restructure_array(ndims, buffer, icount, H5Tget_size(buffer_type_id),volume->dim_indices, dir); | ^~~~~ /<>/libsrc2/hyper.c:674:42: warning: conversion from ‘misize_t’ {aka ‘const long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 674 | icount[volume->dim_indices[i]] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:677:40: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 677 | imap[volume->dim_indices[i]] = i; | ^ /<>/libsrc2/hyper.c:684:26: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 684 | temp_buffer=malloc(buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:691:33: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 691 | memcpy(temp_buffer,buffer,buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:694:27: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 694 | restructure_array(ndims, temp_buffer, icount, H5Tget_size(buffer_type_id), imap, idir); | ^~~~~ /<>/libsrc2/hyper.c: In function ‘mirw_hyperslab_normalized’: /<>/libsrc2/hyper.c:922:11: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 922 | ndims = volume->number_of_dims; | ^~~~~~ In file included from /<>/libcommon/minc2_error.h:38, from /<>/libsrc2/minc2.h:11, from /<>/libsrc2/hyper.c:16: /<>/libsrc2/hyper.c:933:50: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 933 | MI_CHECK_HDF_CALL(mspc_id = H5Screate_simple(ndims, hdf_count, NULL),"H5Screate_simple"); | ^~~~~ /<>/libcommon/minc_error.h:188:42: note: in definition of macro ‘MI_CHECK_HDF_CALL’ 188 | #define MI_CHECK_HDF_CALL(var,call) {if((var)<0) MI_LOG_ERROR(MI2_MSG_HDF5,call);} | ^~~ /<>/libsrc2/hyper.c:940:43: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 940 | miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size); | ^~~~~ /<>/libsrc2/hyper.c:941:43: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 941 | miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size); | ^~~~~ /<>/libsrc2/hyper.c:980:21: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 980 | slice_ndims = ndims; | ^~~~~ /<>/libsrc2/hyper.c:991:14: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 991 | for (i = slice_ndims; i < ndims; i++ ) { | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:999:57: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 999 | image_slice_max_buffer=malloc(total_number_of_slices*sizeof(double)); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:1000:57: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1000 | image_slice_min_buffer=malloc(total_number_of_slices*sizeof(double)); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:1052:31: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1052 | temp_buffer=(double*)malloc(buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:1103:22: warning: conversion from ‘misize_t’ {aka ‘const long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1103 | icount[i] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:1105:25: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1105 | restructure_array(ndims, buffer, icount, H5Tget_size(buffer_type_id),volume->dim_indices, dir); | ^~~~~ /<>/libsrc2/hyper.c:1116:42: warning: conversion from ‘misize_t’ {aka ‘const long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1116 | icount[volume->dim_indices[i]] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:1119:40: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 1119 | imap[volume->dim_indices[i]] = i; | ^ /<>/libsrc2/hyper.c:1125:25: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1125 | temp_buffer2=malloc(input_buffer_size); | ^~~~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:1132:32: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1132 | memcpy(temp_buffer2,buffer,input_buffer_size); | ^~~~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:1135:25: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1135 | restructure_array(ndims, temp_buffer2, icount, H5Tget_size(buffer_type_id), imap, idir); | ^~~~~ [ 33%] Building C object CMakeFiles/minc2.dir/libsrc2/label.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/label.c.o -c /<>/libsrc2/label.c /<>/libsrc2/label.c: In function ‘miswap4’: /<>/libsrc2/label.c:40:12: warning: conversion to ‘int’ from ‘unsigned int’ may change the sign of the result [-Wsign-conversion] 40 | return (tmp); | ^ /<>/libsrc2/label.c: In function ‘miget_label_value_by_index’: /<>/libsrc2/label.c:199:51: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 199 | result = H5Tget_member_value(volume->mtype_id,idx,value); | ^~~ [ 34%] Building C object CMakeFiles/minc2.dir/libsrc2/m2util.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/m2util.c.o -c /<>/libsrc2/m2util.c /<>/libsrc2/m2util.c: In function ‘midownsample_slice’: /<>/libsrc2/m2util.c:1491:18: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1491 | x1 = x; | ^ /<>/libsrc2/m2util.c:1492:26: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1492 | y1 = y + ( j * scale ); | ^ /<>/libsrc2/m2util.c:1492:20: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1492 | y1 = y + ( j * scale ); | ^ /<>/libsrc2/m2util.c:1492:18: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1492 | y1 = y + ( j * scale ); | ^ /<>/libsrc2/m2util.c:1493:26: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1493 | z1 = z + ( k * scale ); | ^ /<>/libsrc2/m2util.c:1493:20: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1493 | z1 = z + ( k * scale ); | ^ /<>/libsrc2/m2util.c:1493:18: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1493 | z1 = z + ( k * scale ); | ^ /<>/libsrc2/m2util.c: In function ‘miconvert_hyperslab_to_real’: /<>/libsrc2/m2util.c:1602:46: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1602 | r = miget_slice_range ( volume, pos, volume->number_of_dims, | ~~~~~~^~~~~~~~~~~~~~~~ /<>/libsrc2/m2util.c:1627:52: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1627 | r = miget_slice_range ( volume, pos, volume->number_of_dims, | ~~~~~~^~~~~~~~~~~~~~~~ /<>/libsrc2/m2util.c: In function ‘minc_update_thumbnail’: /<>/libsrc2/m2util.c:1719:25: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1719 | osize[i] = isize[i] / scale; | ^ /<>/libsrc2/m2util.c:1779:20: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); | ^ /<>/libsrc2/m2util.c:1779:14: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); | ^~~~~ /<>/libsrc2/m2util.c:1782:15: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1782 | out_bytes = osize[1] * osize[2] * sizeof ( double ); | ^~~~~ /<>/libsrc2/m2util.c:1785:14: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1785 | count[0] = scale; | ^~~~~ /<>/libsrc2/m2util.c:1800:22: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1800 | start[0] = slice * scale; | ^ /<>/libsrc2/m2util.c:1803:16: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1803 | count[0] = scale; | ^~~~~ /<>/libsrc2/m2util.c: In function ‘alloc1d’: /<>/libsrc2/m2util.c:1914:52: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1914 | return ( ( double * ) malloc ( sizeof ( double ) * n ) ); | ^ /<>/libsrc2/m2util.c: In function ‘alloc2d’: /<>/libsrc2/m2util.c:1923:34: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1923 | mat = ( double ** ) malloc ( n * sizeof ( double * ) ); | ^ /<>/libsrc2/m2util.c:1930:38: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1930 | mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); | ^ [ 34%] Building C object CMakeFiles/minc2.dir/libsrc2/record.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/record.c.o -c /<>/libsrc2/record.c /<>/libsrc2/record.c: In function ‘miget_record_field_name’: /<>/libsrc2/record.c:57:50: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 57 | *name = H5Tget_member_name(volume->ftype_id, index); | ^~~~~ /<>/libsrc2/record.c: In function ‘miset_record_field_name’: /<>/libsrc2/record.c:91:20: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 91 | offset = index * H5Tget_size(ftype_id); | ^ [ 35%] Building C object CMakeFiles/minc2.dir/libsrc2/slice.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/slice.c.o -c /<>/libsrc2/slice.c /<>/libsrc2/slice.c: In function ‘mirw_slice_minmax’: /<>/libsrc2/slice.c:72:11: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 72 | ndims = H5Sget_simple_extent_ndims ( fspc_id ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 35%] Building C object CMakeFiles/minc2.dir/libsrc2/valid.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/valid.c.o -c /<>/libsrc2/valid.c [ 35%] Building C object CMakeFiles/minc2.dir/libsrc2/volprops.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volprops.c.o -c /<>/libsrc2/volprops.c /<>/libsrc2/volprops.c: In function ‘miget_volume_props’: /<>/libsrc2/volprops.c:133:60: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 133 | handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); | ^ /<>/libsrc2/volprops.c:139:33: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 139 | handle->edge_lengths[i] = dims[i]; | ^~~~ /<>/libsrc2/volprops.c:151:43: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 151 | fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, | ^ /<>/libsrc2/volprops.c:156:34: warning: conversion to ‘int’ from ‘unsigned int’ may change the sign of the result [-Wsign-conversion] 156 | handle->zlib_level = cd_values[0]; | ^~~~~~~~~ /<>/libsrc2/volprops.c: In function ‘miset_props_blocking’: /<>/libsrc2/volprops.c:432:52: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 432 | props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); | ^ [ 36%] Building C object CMakeFiles/minc2.dir/libsrc2/volume.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volume.c.o -c /<>/libsrc2/volume.c /<>/libsrc2/volume.c: In function ‘_hdf_open’: /<>/libsrc2/volume.c:120:117: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 120 | H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc2/volume.c:132:24: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 132 | fd = H5Fopen(path, mode, prp_id); | ^~~~ /<>/libsrc2/volume.c: In function ‘_hdf_create’: /<>/libsrc2/volume.c:224:115: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 224 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*100, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc2/volume.c:227:26: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 227 | fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ /<>/libsrc2/volume.c: In function ‘micreate_volume’: /<>/libsrc2/volume.c:634:23: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 634 | hdf_size[i] = create_props->edge_lengths[i]; | ^~~~~~~~~~~~ In file included from /<>/libcommon/minc2_error.h:38, from /<>/libsrc2/minc2.h:11, from /<>/libsrc2/volume.c:32: /<>/libsrc2/volume.c:664:72: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 664 | MI_CHECK_HDF_CALL_RET(stat = H5Pset_deflate(hdf_plist, create_props->zlib_level),"H5Pset_deflate") | ~~~~~~~~~~~~^~~~~~~~~~~~ /<>/libcommon/minc_error.h:189:46: note: in definition of macro ‘MI_CHECK_HDF_CALL_RET’ 189 | #define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);} | ^~~ /<>/libsrc2/volume.c:896:70: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 896 | handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions * | ^ In file included from /<>/libcommon/minc2_error.h:38, from /<>/libsrc2/minc2.h:11, from /<>/libsrc2/volume.c:32: /<>/libsrc2/volume.c:900:63: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 900 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM,number_of_dimensions * sizeof(midimhandle_t)); | ^ /<>/libcommon/minc_error.h:187:75: note: in definition of macro ‘MI_LOG_ERROR’ 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /<>/libsrc2/volume.c:988:73: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 988 | props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int)); | ^ /<>/libsrc2/volume.c: In function ‘_miget_irregular_spacing’: /<>/libsrc2/volume.c:1171:35: warning: conversion from ‘hssize_t’ {aka ‘long long int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1171 | hdim->offsets = malloc(n_points * sizeof(double)); | ~~~~~~~~~^~~~~~~~~~~~~~~~ /<>/libsrc2/volume.c:1195:34: warning: conversion from ‘hssize_t’ {aka ‘long long int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1195 | hdim->widths = malloc(n_points * sizeof(double)); | ~~~~~~~~~^~~~~~~~~~~~~~~~ /<>/libsrc2/volume.c: In function ‘miopen_volume’: /<>/libsrc2/volume.c:1421:62: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1421 | handle->dim_handles = (midimhandle_t *)malloc(n_dimensions * | ^ In file included from /<>/libcommon/minc2_error.h:38, from /<>/libsrc2/minc2.h:11, from /<>/libsrc2/volume.c:32: /<>/libsrc2/volume.c:1426:56: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1426 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_dimensions * sizeof(midimhandle_t)); | ^ /<>/libcommon/minc_error.h:187:75: note: in definition of macro ‘MI_LOG_ERROR’ 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /<>/libsrc2/volume.c:1509:59: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1509 | hid_t tmp_id = H5Tget_member_type(handle->ftype_id, i); | ^ /<>/libsrc2/volume.c:1510:63: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1510 | size_t tmp_off = H5Tget_member_offset(handle->ftype_id, i); | ^ /<>/libsrc2/volume.c:1511:59: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1511 | char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); | ^ In file included from /<>/libsrc2/volume.c:33: /<>/libsrc2/minc2_private.h:14:22: warning: ‘%s’ directive writing up to 127 bytes into a region of size 107 [-Wformat-overflow=] 14 | #define MI_ROOT_PATH "/minc-2.0" | ^~~~~~~~~~~ /<>/libsrc2/volume.c:1216:17: note: in expansion of macro ‘MI_ROOT_PATH’ 1216 | sprintf(path, MI_ROOT_PATH "/dimensions/%s", dimname); | ^~~~~~~~~~~~ /<>/libsrc2/volume.c:1749:53: note: format string is defined here 1749 | miset_attribute(volume, MI_ROOT_PATH "/image/0/image", "valid_range", | ^~ In file included from /usr/arm-linux-gnueabi/include/stdio.h:867, from /usr/include/hdf5/serial/H5Epublic.h:20, from /usr/include/hdf5/serial/hdf5.h:26, from /<>/libsrc2/volume.c:8: /usr/arm-linux-gnueabi/include/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 22 and 149 bytes into a destination of size 128 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 36%] Building C object CMakeFiles/minc2.dir/libcommon/minc2_error.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc2_error.c.o -c /<>/libcommon/minc2_error.c [ 37%] Building C object CMakeFiles/minc2.dir/libcommon/minc_config.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc_config.c.o -c /<>/libcommon/minc_config.c /<>/libcommon/minc_config.c: In function ‘miread_cfg’: /<>/libcommon/minc_config.c:84:42: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 84 | strncpy(buffer, tmp, maxlen); | ^~~~~~ [ 37%] Building C object CMakeFiles/minc2.dir/libcommon/minc_error.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc_error.c.o -c /<>/libcommon/minc_error.c [ 38%] Building C object CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -c /<>/libcommon/ParseArgv.c /<>/libcommon/ParseArgv.c: In function ‘PrintUsage’: /<>/libcommon/ParseArgv.c:439:32: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 439 | numSpaces = width + 1 - strlen(infoPtr->key); | ^ /<>/libcommon/ParseArgv.c:439:22: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 439 | numSpaces = width + 1 - strlen(infoPtr->key); | ^~~~~ [ 38%] Building C object CMakeFiles/minc2.dir/libcommon/read_file_names.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -c /<>/libcommon/read_file_names.c /<>/libcommon/read_file_names.c: In function ‘read_file_names’: /<>/libcommon/read_file_names.c:53:34: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 53 | files = malloc(sizeof(*files) * array_size); | ^ /<>/libcommon/read_file_names.c:76:48: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 76 | files = realloc(files, sizeof(*files) * array_size); | ^ [ 39%] Building C object CMakeFiles/minc2.dir/libcommon/restructure.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/restructure.c.o -c /<>/libcommon/restructure.c /<>/libcommon/restructure.c: In function ‘restructure_array’: /<>/libcommon/restructure.c:134:21: warning: unsigned conversion from ‘int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘-1’ to ‘4294967295’ [-Wsign-conversion] 134 | offset_next = -1; /* Initialize. */ | ^ /<>/libcommon/restructure.c:64:40: warning: conversion from ‘int’ to ‘unsigned char’ may change value [-Wconversion] 64 | #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) | ^ /<>/libcommon/restructure.c:150:7: note: in expansion of macro ‘BIT_SET’ 150 | BIT_SET(bitmap, offset_start); | ^~~~~~~ /<>/libcommon/restructure.c:64:40: warning: conversion from ‘int’ to ‘unsigned char’ may change value [-Wconversion] 64 | #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) | ^ /<>/libcommon/restructure.c:204:11: note: in expansion of macro ‘BIT_SET’ 204 | BIT_SET(bitmap, offset_next); | ^~~~~~~ [ 39%] Building C object CMakeFiles/minc2.dir/libcommon/time_stamp.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -c /<>/libcommon/time_stamp.c [ 39%] Building C object CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -c /<>/libsrc/dim_conversion.c In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/dim_conversion.c:93: /<>/libsrc/dim_conversion.c: In function ‘MI_icv_dimconvert’: /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:161:37: note: in expansion of macro ‘ROUND’ 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:166:35: note: in expansion of macro ‘ROUND’ 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:175:38: note: in expansion of macro ‘ROUND’ 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:180:36: note: in expansion of macro ‘ROUND’ 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:189:36: note: in expansion of macro ‘ROUND’ 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:194:34: note: in expansion of macro ‘ROUND’ 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:123:23: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/minc_basic.h:200:26: note: in expansion of macro ‘MIN’ 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:161:37: note: in expansion of macro ‘ROUND’ 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:166:35: note: in expansion of macro ‘ROUND’ 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:175:38: note: in expansion of macro ‘ROUND’ 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:180:36: note: in expansion of macro ‘ROUND’ 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:189:36: note: in expansion of macro ‘ROUND’ 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:194:34: note: in expansion of macro ‘ROUND’ 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:123:23: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/minc_basic.h:200:26: note: in expansion of macro ‘MIN’ 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ [ 40%] Building C object CMakeFiles/minc2.dir/libsrc/image_conversion.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -c /<>/libsrc/image_conversion.c /<>/libsrc/image_conversion.c: In function ‘miicv_setdbl’: /<>/libsrc/image_conversion.c:399:29: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 399 | icvp->user_do_range = value; | ^~~~~ /<>/libsrc/image_conversion.c:408:28: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 408 | icvp->user_do_norm = value; | ^~~~~ /<>/libsrc/image_conversion.c:411:30: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 411 | icvp->user_user_norm = value; | ^~~~~ /<>/libsrc/image_conversion.c:420:33: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 420 | icvp->user_do_fillvalue = value; | ^~~~~ /<>/libsrc/image_conversion.c:426:31: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 426 | icvp->user_do_dimconv = value; | ^~~~~ /<>/libsrc/image_conversion.c:429:30: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 429 | icvp->user_do_scalar = value; | ^~~~~ /<>/libsrc/image_conversion.c:432:14: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 432 | ival = value; | ^~~~~ /<>/libsrc/image_conversion.c:437:14: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 437 | ival = value; | ^~~~~ /<>/libsrc/image_conversion.c:442:14: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 442 | ival = value; | ^~~~~ /<>/libsrc/image_conversion.c:447:14: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 447 | ival = value; | ^~~~~ /<>/libsrc/image_conversion.c:455:32: warning: conversion from ‘double’ to ‘long int’ may change value [-Wfloat-conversion] 455 | icvp->user_dim_size[0] = value; | ^~~~~ /<>/libsrc/image_conversion.c:458:32: warning: conversion from ‘double’ to ‘long int’ may change value [-Wfloat-conversion] 458 | icvp->user_dim_size[1] = value; | ^~~~~ /<>/libsrc/image_conversion.c:461:32: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 461 | icvp->user_keep_aspect = value; | ^~~~~ /<>/libsrc/image_conversion.c:475:38: warning: conversion from ‘double’ to ‘long int’ may change value [-Wfloat-conversion] 475 | icvp->user_dim_size[idim] = value; | ^~~~~ /<>/libsrc/image_conversion.c: In function ‘miicv_inqint’: /<>/libsrc/image_conversion.c:774:13: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 774 | *value = dvalue; | ^~~~~~ /<>/libsrc/image_conversion.c: In function ‘miicv_inqlong’: /<>/libsrc/image_conversion.c:803:13: warning: conversion from ‘double’ to ‘long int’ may change value [-Wfloat-conversion] 803 | *value = dvalue; | ^~~~~~ In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/image_conversion.c:173: /<>/libsrc/image_conversion.c: In function ‘MI_icv_zero_buffer’: /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:161:37: note: in expansion of macro ‘ROUND’ 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:166:35: note: in expansion of macro ‘ROUND’ 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:175:38: note: in expansion of macro ‘ROUND’ 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:180:36: note: in expansion of macro ‘ROUND’ 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:189:36: note: in expansion of macro ‘ROUND’ 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:194:34: note: in expansion of macro ‘ROUND’ 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:123:23: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/minc_basic.h:200:26: note: in expansion of macro ‘MIN’ 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ [ 40%] Building C object CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -c /<>/libsrc/minc_convenience.c /<>/libsrc/minc_convenience.c: In function ‘miset_valid_range’: /<>/libsrc/minc_convenience.c:430:17: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 430 | fval[0] = valid_range[0]; | ^~~~~~~~~~~ /<>/libsrc/minc_convenience.c:431:17: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 431 | fval[1] = valid_range[1]; | ^~~~~~~~~~~ /<>/libsrc/minc_convenience.c: In function ‘miattput_pointer’: /<>/libsrc/minc_convenience.c:638:10: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 638 | index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX)); | ^~~~~~ In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/minc_convenience.c:152: /<>/libsrc/minc_convenience.c: In function ‘miadd_child’: /<>/libsrc/minc_convenience.c:743:56: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 743 | if ((child_list = MALLOC(child_list_size+MAX_NC_NAME+ | ^ /<>/libsrc/minc_useful.h:138:39: note: in definition of macro ‘MALLOC’ 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) | ^~~~~~~ In file included from /<>/libsrc/minc_private.h:89, from /<>/libsrc/minc_convenience.c:152: /<>/libsrc/minc_convenience.c:746:49: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 746 | child_list_size+MAX_NC_NAME+strlen(MI_CHILD_SEPARATOR)); | ^ /<>/libcommon/minc_error.h:187:75: note: in definition of macro ‘MI_LOG_ERROR’ 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /<>/libsrc/minc_convenience.c:765:23: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 765 | child_list_size += strlen(MI_CHILD_SEPARATOR); | ^~ /<>/libsrc/minc_convenience.c:765:26: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 765 | child_list_size += strlen(MI_CHILD_SEPARATOR); | ^~~~~~ /<>/libsrc/minc_convenience.c:780:23: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); | ^~ /<>/libsrc/minc_convenience.c:780:26: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); | ^~~~~~ /<>/libsrc/minc_convenience.c: In function ‘miappend_history’: /<>/libsrc/minc_convenience.c:1378:30: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1378 | att_val = malloc(att_len + strlen(tm_stamp) + 2); | ^ [ 41%] Building C object CMakeFiles/minc2.dir/libsrc/nd_loop.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -c /<>/libsrc/nd_loop.c [ 41%] Building C object CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -c /<>/libsrc/netcdf_convenience.c In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/netcdf_convenience.c:182: /<>/libsrc/netcdf_convenience.c: In function ‘miexpand_file’: /<>/libsrc/netcdf_convenience.c:380:38: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 380 | compfile = MALLOC(strlen(path) + max_compression_code_length + 2, char); | ^ /<>/libsrc/minc_useful.h:138:39: note: in definition of macro ‘MALLOC’ 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) | ^~~~~~~ /<>/libsrc/netcdf_convenience.c: In function ‘miattputstr’: /<>/libsrc/netcdf_convenience.c:1033:38: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 1033 | strlen(value) + 1, value); | ~~~~~~~~~~~~~~^~~ [ 42%] Building C object CMakeFiles/minc2.dir/libsrc/value_conversion.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o -c /<>/libsrc/value_conversion.c /<>/libsrc/value_conversion.c: In function ‘MI_convert_type’: /<>/libsrc/value_conversion.c:622:49: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 622 | (size_t) number_of_values*inincr); | ^ In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/value_conversion.c:98: /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:161:37: note: in expansion of macro ‘ROUND’ 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:166:35: note: in expansion of macro ‘ROUND’ 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:175:38: note: in expansion of macro ‘ROUND’ 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:180:36: note: in expansion of macro ‘ROUND’ 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:189:36: note: in expansion of macro ‘ROUND’ 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:194:34: note: in expansion of macro ‘ROUND’ 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:123:23: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/minc_basic.h:200:26: note: in expansion of macro ‘MIN’ 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ [ 42%] Building C object CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -c /<>/libsrc/voxel_loop.c /<>/libsrc/voxel_loop.c: In function ‘update_history’: /<>/libsrc/voxel_loop.c:1182:15: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1182 | att_length += strlen(arg_string) + 1; | ^~ /<>/libsrc/voxel_loop.c:1182:18: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 1182 | att_length += strlen(arg_string) + 1; | ^~~~~~ [ 43%] Building C object CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -c /<>/libsrc/hdf_convenience.c /<>/libsrc/hdf_convenience.c: In function ‘hdf_var_add’: /<>/libsrc/hdf_convenience.c:202:59: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 202 | new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims); | ^ In file included from /<>/libsrc/minc_private.h:89, from /<>/libsrc/hdf_convenience.c:8: /<>/libsrc/hdf_convenience.c:209:59: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 209 | MI_LOG_ERROR(MI_MSG_OUTOFMEM, sizeof(hsize_t) * ndims); | ^ /<>/libcommon/minc_error.h:187:75: note: in definition of macro ‘MI_LOG_ERROR’ 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_size’: /<>/libsrc/hdf_convenience.c:370:20: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 370 | int typ_size = H5Tget_size(typ_id); | ^~~~~~~~~~~ /<>/libsrc/hdf_convenience.c:371:20: warning: conversion from ‘hssize_t’ {aka ‘long long int’} to ‘int’ may change value [-Wconversion] 371 | int spc_size = H5Sget_simple_extent_npoints(spc_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_attname’: /<>/libsrc/hdf_convenience.c:455:38: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 455 | att_id = H5Aopen_idx(loc_id, attnum); | ^~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_attinq’: /<>/libsrc/hdf_convenience.c:578:25: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 578 | *length_ptr = typ_size; | ^~~~~~~~ /<>/libsrc/hdf_convenience.c:581:25: warning: conversion from ‘hssize_t’ {aka ‘long long int’} to ‘int’ may change value [-Wconversion] 581 | *length_ptr = H5Sget_simple_extent_npoints(spc_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_get_dimorder’: /<>/libsrc/hdf_convenience.c:667:14: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 667 | length = H5Tget_size(typ_id); | ^~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_dimdef’: /<>/libsrc/hdf_convenience.c:958:49: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 958 | hdf_set_length(var->dset_id, dimnm, length); | ^~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_attput’: /<>/libsrc/hdf_convenience.c:1147:30: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1147 | H5Tset_size(ftyp_id, val_len); | ^~~~~~~ /<>/libsrc/hdf_convenience.c:1185:33: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1185 | hsize_t temp_size = val_len; | ^~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_vardef’: /<>/libsrc/hdf_convenience.c:1322:19: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1322 | dims[i] = length; | ^~~~~~ /<>/libsrc/hdf_convenience.c:1369:60: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1369 | if( MI_MAX_VAR_BUFFER_SIZE > dims[i] * val * unit_size ) { | ^ In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/hdf_convenience.c:8: /<>/libsrc/hdf_convenience.c:1373:81: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1373 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); | ^ /<>/libsrc/minc_useful.h:123:34: note: in definition of macro ‘MIN’ 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/hdf_convenience.c:1373:81: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1373 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); | ^ /<>/libsrc/minc_useful.h:123:47: note: in definition of macro ‘MIN’ 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/hdf_convenience.c:1381:38: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1381 | chkdims[i] = chunk_length; | ^~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c:1386:36: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1386 | H5Pset_deflate(prp_id, comp_level); | ^~~~~~~~~~ /<>/libsrc/hdf_convenience.c:1418:42: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 1418 | hdf_set_length(dst_id, varnm, dim->length); | ~~~^~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_varget’: /<>/libsrc/hdf_convenience.c:1534:19: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1534 | fstart[i] = start_ptr[i]; | ^~~~~~~~~ /<>/libsrc/hdf_convenience.c:1535:18: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1535 | count[i] = length_ptr[i]; | ^~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_varputg’: /<>/libsrc/hdf_convenience.c:1633:45: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1633 | mystart = (hsize_t *)calloc(varp->ndims * 7, sizeof(hsize_t)); | ~~~~~~~~~~~~^~~ /<>/libsrc/hdf_convenience.c:1649:18: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1649 | mystart[idim] = start != NULL ? start[idim] : 0; | ^~~~~ /<>/libsrc/hdf_convenience.c:1658:22: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1658 | myedges[idim] = edges[idim]; | ^~~~~ /<>/libsrc/hdf_convenience.c:1682:29: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘ptrdiff_t’ {aka ‘int’} may change the sign of the result [-Wsign-conversion] 1682 | length[idim] = mymap[idim] * myedges[idim]; | ^ /<>/libsrc/hdf_convenience.c:1683:45: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘ptrdiff_t’ {aka ‘int’} may change the sign of the result [-Wsign-conversion] 1683 | stop[idim] = mystart[idim] + myedges[idim] * mystride[idim]; | ^ /<>/libsrc/hdf_convenience.c:1740:16: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘ptrdiff_t’ {aka ‘int’} may change the sign of the result [-Wsign-conversion] 1740 | mystart[idim] += mystride[idim]; | ^~ /<>/libsrc/hdf_convenience.c:1742:22: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1742 | mystart[idim] = start[idim]; | ^~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_vargetg’: /<>/libsrc/hdf_convenience.c:1810:42: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1810 | mystart = (long *)calloc(varp->ndims * 7, sizeof(long)); | ~~~~~~~~~~~~^~~ /<>/libsrc/hdf_convenience.c:1837:39: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1837 | myedges[idim] = varp->dims[idim] - mystart[idim]; | ^ /<>/libsrc/hdf_convenience.c:1837:22: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘long int’ may change value [-Wconversion] 1837 | myedges[idim] = varp->dims[idim] - mystart[idim]; | ^~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_varput’: /<>/libsrc/hdf_convenience.c:1957:19: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1957 | fstart[i] = start_ptr[i]; | ^~~~~~~~~ /<>/libsrc/hdf_convenience.c:1958:18: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1958 | count[i] = length_ptr[i]; | ^~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_varsize’: /<>/libsrc/hdf_convenience.c:2069:23: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘long int’ may change value [-Wconversion] 2069 | size_ptr[i] = dims[i]; | ^~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_copy_attr’: /<>/libsrc/hdf_convenience.c:2103:26: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2103 | if ((val_ptr = malloc(hdf_size(spc_id, typ_id))) == NULL) | ^~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_open’: /<>/libsrc/hdf_convenience.c:2223:117: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2223 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c:2239:33: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2239 | file_id = H5Fopen(path, mode, fpid); | ^~~~ /<>/libsrc/hdf_convenience.c:2249:25: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2249 | file->wr_ok = (mode & H5F_ACC_RDWR) != 0; | ^ /<>/libsrc/hdf_convenience.c:2271:37: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2271 | dims[ndims++] = H5Tget_nmembers(type_id); | ^~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_create’: /<>/libsrc/hdf_convenience.c:2331:117: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2331 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c:2347:35: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2347 | file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ [ 43%] Building C object CMakeFiles/minc2.dir/libsrc/minc_compat.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -c /<>/libsrc/minc_compat.c /<>/libsrc/minc_compat.c: In function ‘MI2attcopy’: /<>/libsrc/minc_compat.c:307:51: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 307 | val_ptr = malloc(MI2typelen(att_type) * att_length); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 43%] Building C object CMakeFiles/minc2.dir/libsrc/minc_simple.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -c /<>/libsrc/minc_simple.c /<>/libsrc/minc_simple.c: In function ‘minc_load_data’: /<>/libsrc/minc_simple.c:393:27: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 393 | ucount[j++] = dim_len[i]; | ^~~~~~~ /<>/libsrc/minc_simple.c:397:23: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), | ^~~~~~~~~ In file included from /<>/libsrc/minc.h:172, from /<>/libsrc/minc_private.h:83, from /<>/libsrc/minc_simple.c:38: /<>/libsrc/minc_compat.h:67:19: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 67 | #define nctypelen MI2typelen /<>/libsrc/minc_simple.c:397:51: note: in expansion of macro ‘nctypelen’ 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), | ^~~~~~~~~ /<>/libsrc/minc_simple.c:416:77: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 416 | p_file->file_atts = (struct att_info *) malloc(sizeof (struct att_info) * | ^ /<>/libsrc/minc_simple.c:419:77: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 419 | p_file->file_vars = (struct var_info *) malloc(sizeof (struct var_info) * | ^ /<>/libsrc/minc_simple.c:431:48: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 431 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/minc_simple.c:446:51: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 446 | p_var->var_atts = malloc(p_var->var_natts * | ^ /<>/libsrc/minc_simple.c:462:52: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 462 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 44%] Building C object CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -c /<>/libsrc/minc_format_convert.c [ 44%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o -c /<>/volume_io/Geometry/colour.c [ 45%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -c /<>/volume_io/Geometry/colour_def.c [ 45%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o -c /<>/volume_io/Geometry/gaussian.c [ 46%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o -c /<>/volume_io/Geometry/inverse.c [ 46%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o -c /<>/volume_io/Geometry/newton.c [ 46%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o -c /<>/volume_io/Geometry/points.c [ 47%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o -c /<>/volume_io/Geometry/splines.c [ 47%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o -c /<>/volume_io/Geometry/tensors.c [ 48%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o -c /<>/volume_io/Geometry/transforms.c [ 48%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /<>/volume_io/MNI_formats/gen_xf_io.c /<>/volume_io/MNI_formats/gen_xf_io.c: In function ‘output_one_transform’: /<>/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 184 | volume_filename = alloc_string( string_length(prefix_filename) + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 185 | 100 ); | ~~~ [ 49%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -c /<>/volume_io/MNI_formats/gen_xfs.c [ 49%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -c /<>/volume_io/MNI_formats/grid_transforms.c [ 50%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -c /<>/volume_io/MNI_formats/mni_io.c [ 50%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -c /<>/volume_io/MNI_formats/tag_points.c [ 50%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /<>/volume_io/MNI_formats/thin_plate_spline.c [ 51%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -c /<>/volume_io/Prog_utils/alloc.c /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_in_bytes’: /<>/volume_io/Prog_utils/alloc.c:247:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 247 | print_error( "Cannot alloc 1D array of %lu bytes.\n", n_bytes ); | ~~^ ~~~~~~~ | | | | | size_t {aka unsigned int} | long unsigned int | %u /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_1d’: /<>/volume_io/Prog_utils/alloc.c:286:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 286 | print_error( "Cannot alloc 1D array of %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 287 | n_elements, type_size ); | ~~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:286:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 286 | print_error( "Cannot alloc 1D array of %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 287 | n_elements, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_2d’: /<>/volume_io/Prog_utils/alloc.c:329:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 329 | print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 330 | n1, n2, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:329:57: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 329 | print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 330 | n1, n2, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:329:73: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 329 | print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 330 | n1, n2, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_3d’: /<>/volume_io/Prog_utils/alloc.c:377:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 377 | print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 378 | n1, n2, n3, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:377:57: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 377 | print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 378 | n1, n2, n3, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:377:64: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 377 | print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 378 | n1, n2, n3, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:377:80: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 377 | print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 378 | n1, n2, n3, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_4d’: /<>/volume_io/Prog_utils/alloc.c:430:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:430:57: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:430:64: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:430:71: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:430:87: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_5d’: /<>/volume_io/Prog_utils/alloc.c:486:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:57: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:64: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:71: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:78: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:94: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘realloc_memory’: /<>/volume_io/Prog_utils/alloc.c:544:46: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 544 | print_error( "Error reallocing %lu elements of size %lu.\n", | ~~^ | | | long unsigned int | %u 545 | n_elements, type_size ); | ~~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:544:67: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 544 | print_error( "Error reallocing %lu elements of size %lu.\n", | ~~^ | | | long unsigned int | %u 545 | n_elements, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:558:76: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 558 | print_error("Error: tried to realloc invalid number of elements, %lu.\n", | ~~^ | | | long unsigned int | %u 559 | n_elements ); | ~~~~~~~~~~ | | | size_t {aka unsigned int} [ 51%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o -c /<>/volume_io/Prog_utils/alloc_check.c [ 52%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o -c /<>/volume_io/Prog_utils/arrays.c [ 52%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -c /<>/volume_io/Prog_utils/files.c /<>/volume_io/Prog_utils/files.c: In function ‘extract_directory’: /<>/volume_io/Prog_utils/files.c:1249:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1249 | directory = alloc_string( slash_index ); | ^~~~~~~~~~~ /<>/volume_io/Prog_utils/files.c: In function ‘input_binary_data’: /<>/volume_io/Prog_utils/files.c:1746:58: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 1746 | print_error( " (%d out of %d items of size %ld). ", n_done, n, | ~~^ | | | long int | %d 1747 | element_size ); | ~~~~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/files.c: In function ‘output_binary_data’: /<>/volume_io/Prog_utils/files.c:1786:58: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 1786 | print_error( " (%d out of %d items of size %ld). ", n_done, n, | ~~^ | | | long int | %d 1787 | element_size ); | ~~~~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/files.c: In function ‘io_quoted_string’: /<>/volume_io/Prog_utils/files.c:2445:34: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2445 | *str = alloc_string( length ); | ^~~~~~ [ 53%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -c /<>/volume_io/Prog_utils/print.c [ 53%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -c /<>/volume_io/Prog_utils/progress.c [ 54%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -c /<>/volume_io/Prog_utils/string.c /<>/volume_io/Prog_utils/string.c: In function ‘create_string’: /<>/volume_io/Prog_utils/string.c:40:25: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 40 | str = alloc_string( string_length(initial) ); | ^~~~~~~~~~~~~~~~~~~~~~ /<>/volume_io/Prog_utils/string.c: In function ‘strip_outer_blanks’: /<>/volume_io/Prog_utils/string.c:235:63: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 235 | stripped = alloc_string( last_non_blank - first_non_blank + 1 ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ [ 54%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -c /<>/volume_io/Prog_utils/time.c [ 54%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -c /<>/volume_io/Volumes/evaluate.c /<>/volume_io/Volumes/evaluate.c: In function ‘trilinear_interpolate_rgb’: /<>/volume_io/Volumes/evaluate.c:257:24: warning: conversion from ‘VIO_Real’ {aka ‘double’} to ‘unsigned int’ may change value [-Wfloat-conversion] 257 | coefs[c] = outside_value; | ^~~~~~~~~~~~~ /<>/volume_io/Volumes/evaluate.c:305:20: warning: conversion from ‘VIO_Real’ {aka ‘double’} to ‘int’ may change value [-Wfloat-conversion] 305 | out_rgb[i] = c0 + w * dw; | ^~ [ 55%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -c /<>/volume_io/Volumes/get_hyperslab.c [ 55%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -c /<>/volume_io/Volumes/input_free.c [ 56%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -c /<>/volume_io/Volumes/input_mnc.c /<>/volume_io/Volumes/input_mnc.c: In function ‘initialize_minc_input_from_minc_id’: /<>/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 373 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /<>/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 374 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ [ 56%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -c /<>/volume_io/Volumes/input_volume.c [ 57%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -c /<>/volume_io/Volumes/multidim_arrays.c [ 57%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -c /<>/volume_io/Volumes/output_mnc.c /<>/volume_io/Volumes/output_mnc.c: In function ‘add_minc_history’: /<>/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 779 | new_history = alloc_string( old_att_length ); | ^~~~~~~~~~~~~~ [ 58%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -c /<>/volume_io/Volumes/output_volume.c [ 58%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -c /<>/volume_io/Volumes/set_hyperslab.c [ 58%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -c /<>/volume_io/Volumes/volume_cache.c [ 59%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -c /<>/volume_io/Volumes/volumes.c /<>/volume_io/Volumes/volumes.c: In function ‘copy_volume_definition_no_alloc’: /<>/volume_io/Volumes/volumes.c:2630:60: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2630 | VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); | ^ /<>/volume_io/Volumes/volumes.c:2631:60: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2631 | VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]); | ^ /<>/volume_io/Volumes/volumes.c: In function ‘copy_volume_new_type’: /<>/volume_io/Volumes/volumes.c:2819:44: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 2819 | ((signed char *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2823:46: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 2823 | ((unsigned char *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2829:45: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 2829 | ((signed short *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2833:47: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 2833 | ((unsigned short *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2839:43: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 2839 | ((signed int *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2843:45: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 2843 | ((unsigned int *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2847:34: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 2847 | ((float *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c: In function ‘set_volume_irregular_starts’: /<>/volume_io/Volumes/volumes.c:2942:51: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 2942 | volume->irregular_starts[idim] = malloc(count * sizeof (VIO_Real)); | ^ /<>/volume_io/Volumes/volumes.c: In function ‘set_volume_irregular_widths’: /<>/volume_io/Volumes/volumes.c:2975:51: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 2975 | volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); | ^ [ 59%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -c /<>/volume_io/Volumes/input_mnc2.c /<>/volume_io/Volumes/input_mnc2.c: In function ‘initialize_minc_input_from_minc2_id’: /<>/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 144 | miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:145:63: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 145 | miget_dimension_separations(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_step); | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:146:58: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 146 | miget_dimension_starts(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_start); | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:153:32: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘long int’ may change value [-Wconversion] 153 | file->sizes_in_file[d] = dimension_size[d]; | ^~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:179:21: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 179 | slices_count*=dimension_size[d]; | ^~ /<>/volume_io/Volumes/input_mnc2.c:179:23: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 179 | slices_count*=dimension_size[d]; | ^~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:181:38: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 181 | slice_start=(misize_t *)calloc(n_slice_dimensions,sizeof(misize_t)); | ^~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:182:51: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 182 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&volume_max,&volume_min); | ^~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:203:55: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 203 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&slice_max,&slice_min); | ^~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:372:51: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 372 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /<>/volume_io/Volumes/input_mnc2.c:373:51: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 373 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /<>/volume_io/Volumes/input_mnc2.c: In function ‘input_minc2_hyperslab’: /<>/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 707 | used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; | ^~~~ [ 60%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -c /<>/volume_io/Volumes/output_mnc2.c /<>/volume_io/Volumes/output_mnc2.c: In function ‘output_minc2_hyperslab’: /<>/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 875 | long_file_start[file_ind] = (long) file_start[file_ind]; | ^ /<>/volume_io/Volumes/output_mnc2.c:876:37: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 876 | long_file_count[file_ind] = (long) file_count[file_ind]; | ^ /<>/volume_io/Volumes/output_mnc2.c: In function ‘output_the_volume2’: /<>/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1246 | miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); | ~~~~^~~~~~~~~~~~~~~~~~~ [ 60%] Linking C shared library libminc2.so /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc2.so.5.2.0 -o libminc2.so.5.2.0 CMakeFiles/minc2.dir/libsrc2/convert.c.o CMakeFiles/minc2.dir/libsrc2/datatype.c.o CMakeFiles/minc2.dir/libsrc2/dimension.c.o CMakeFiles/minc2.dir/libsrc2/free.c.o CMakeFiles/minc2.dir/libsrc2/grpattr.c.o CMakeFiles/minc2.dir/libsrc2/hyper.c.o CMakeFiles/minc2.dir/libsrc2/label.c.o CMakeFiles/minc2.dir/libsrc2/m2util.c.o CMakeFiles/minc2.dir/libsrc2/record.c.o CMakeFiles/minc2.dir/libsrc2/slice.c.o CMakeFiles/minc2.dir/libsrc2/valid.c.o CMakeFiles/minc2.dir/libsrc2/volprops.c.o CMakeFiles/minc2.dir/libsrc2/volume.c.o CMakeFiles/minc2.dir/libcommon/minc2_error.c.o CMakeFiles/minc2.dir/libcommon/minc_config.c.o CMakeFiles/minc2.dir/libcommon/minc_error.c.o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o CMakeFiles/minc2.dir/libcommon/restructure.c.o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -Wl,-rpath,/usr/lib/arm-linux-gnueabi/hdf5/serial: /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lnetcdf -lm -ldl -lnetcdf -ldl -lm -lrt -lnetcdf -lm -ldl -lnetcdf -lm -ldl /usr/bin/cmake -E cmake_symlink_library libminc2.so.5.2.0 libminc2.so.5.2.0 libminc2.so make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 60%] Built target minc2 make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/ezminc /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/ezminc /<>/obj-arm-linux-gnueabi/ezminc/CMakeFiles/minc_io.dir/DependInfo.cmake --color= Scanning dependencies of target minc_io make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 60%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_rw.cpp.o cd /<>/obj-arm-linux-gnueabi/ezminc && /usr/bin/arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -c /<>/ezminc/minc_1_rw.cpp In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:72, from /<>/ezminc/minc_1_rw.h:18, from /<>/ezminc/minc_1_rw.cpp:23: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 509 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:67, from /<>/ezminc/minc_1_rw.h:18, from /<>/ezminc/minc_1_rw.cpp:23: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h: In member function ‘void minc::minc_1_reader::open(const char*, bool, bool, bool)’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 960 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o cd /<>/obj-arm-linux-gnueabi/ezminc && /usr/bin/arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -c /<>/ezminc/minc_1_simple_rw.cpp [ 61%] Linking CXX shared library libminc_io.so cd /<>/obj-arm-linux-gnueabi/ezminc && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_io.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-g++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc_io.so.5.2.0 -o libminc_io.so.5.2.0 CMakeFiles/minc_io.dir/minc_1_rw.cpp.o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial: ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf cd /<>/obj-arm-linux-gnueabi/ezminc && /usr/bin/cmake -E cmake_symlink_library libminc_io.so.5.2.0 libminc_io.so.5.2.0 libminc_io.so make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 61%] Built target minc_io make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/ezminc/examples /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/ezminc/examples /<>/obj-arm-linux-gnueabi/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake --color= Scanning dependencies of target create_grid_file make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 62%] Building CXX object ezminc/examples/CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o cd /<>/obj-arm-linux-gnueabi/ezminc/examples && /usr/bin/arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -c /<>/ezminc/examples/create_grid_file.cpp /<>/ezminc/examples/create_grid_file.cpp: In function ‘int main(int, char**)’: /<>/ezminc/examples/create_grid_file.cpp:115:17: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 115 | def[0]=amp*sin(M_PI*pos[0]/100.0); | ~~~^~~~~~~~~~~~~~~~~~~~~~~ /<>/ezminc/examples/create_grid_file.cpp:116:17: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 116 | def[1]=amp*sin(2*M_PI*pos[1]/100.0); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/ezminc/examples/create_grid_file.cpp:117:17: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 117 | def[2]=amp*cos(3*M_PI*pos[2]/100.0); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:72, from /<>/ezminc/minc_1_rw.h:18, from /<>/ezminc/minc_1_simple.h:18, from /<>/ezminc/examples/create_grid_file.cpp:5: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {minc::dim_info}; _Tp = minc::dim_info; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {minc::dim_info}; _Tp = minc::dim_info; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Linking CXX executable create_grid_file cd /<>/obj-arm-linux-gnueabi/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_file.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -o create_grid_file -Wl,-rpath,/<>/obj-arm-linux-gnueabi/ezminc:/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 62%] Built target create_grid_file make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/ezminc/examples /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/ezminc/examples /<>/obj-arm-linux-gnueabi/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake --color= Scanning dependencies of target volume_msq_dist make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 62%] Building CXX object ezminc/examples/CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o cd /<>/obj-arm-linux-gnueabi/ezminc/examples && /usr/bin/arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -c /<>/ezminc/examples/volume_msq_dist.cpp [ 63%] Linking CXX executable volume_msq_dist cd /<>/obj-arm-linux-gnueabi/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_msq_dist.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -o volume_msq_dist -Wl,-rpath,/<>/obj-arm-linux-gnueabi/ezminc:/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 63%] Built target volume_msq_dist make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/ezminc/examples /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/ezminc/examples /<>/obj-arm-linux-gnueabi/ezminc/examples/CMakeFiles/volume_avg.dir/DependInfo.cmake --color= Scanning dependencies of target volume_avg make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 63%] Building CXX object ezminc/examples/CMakeFiles/volume_avg.dir/volume_avg.cpp.o cd /<>/obj-arm-linux-gnueabi/ezminc/examples && /usr/bin/arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_avg.dir/volume_avg.cpp.o -c /<>/ezminc/examples/volume_avg.cpp /<>/ezminc/examples/volume_avg.cpp: In function ‘int main(int, char**)’: /<>/ezminc/examples/volume_avg.cpp:128:47: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 128 | _sd.c_buf()[i]=sqrt(_sd.c_buf()[i]/(argc-1) - _avg.c_buf()[i]*_avg.c_buf()[i] ); | ~~~~~^~~ [ 64%] Linking CXX executable volume_avg cd /<>/obj-arm-linux-gnueabi/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_avg.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_avg.dir/volume_avg.cpp.o -o volume_avg -Wl,-rpath,/<>/obj-arm-linux-gnueabi/ezminc:/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 64%] Built target volume_avg make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/ezminc/examples /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/ezminc/examples /<>/obj-arm-linux-gnueabi/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake --color= Scanning dependencies of target trilinear_resample make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 65%] Building CXX object ezminc/examples/CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o cd /<>/obj-arm-linux-gnueabi/ezminc/examples && /usr/bin/arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -c /<>/ezminc/examples/trilinear_resample.cpp /<>/ezminc/examples/trilinear_resample.cpp: In function ‘int main(int, char**)’: /<>/ezminc/examples/trilinear_resample.cpp:90:48: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 90 | old_step[i-1]=new_info[rdr.map_space(i)].step; /<>/ezminc/examples/trilinear_resample.cpp:91:49: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 91 | old_start[i-1]=new_info[rdr.map_space(i)].start; /<>/ezminc/examples/trilinear_resample.cpp:93:45: warning: conversion from ‘size_t’ {aka ‘unsigned int’} to ‘float’ may change value [-Wconversion] 93 | float len=(new_info[rdr.map_space(i)].length)*old_step[i-1]; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /<>/ezminc/examples/trilinear_resample.cpp:98:49: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 98 | new_start[i-1]=new_info[rdr.map_space(i)].start; /<>/ezminc/examples/trilinear_resample.cpp:100:58: warning: conversion from ‘double’ to ‘size_t’ {aka ‘unsigned int’} may change value [-Wfloat-conversion] 100 | new_len[i-1]=new_info[rdr.map_space(i)].length=ceil(fabs(len/_step)); | ~~~~^~~~~~~~~~~~~~~~~ /<>/ezminc/examples/trilinear_resample.cpp:109:51: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); | ~^~~~~~ /<>/ezminc/examples/trilinear_resample.cpp:109:59: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); | ~^~~~~~ /<>/ezminc/examples/trilinear_resample.cpp:109:67: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); | ~^~~~~~ /<>/ezminc/examples/trilinear_resample.cpp:115:53: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 115 | output_vol.set(x,y,z,input_vol.interpolate(cc[0],cc[1],cc[2])); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ In file included from /<>/ezminc/minc_1_simple_rw.h:19, from /<>/ezminc/examples/trilinear_resample.cpp:18: /<>/ezminc/minc_io_simple_volume.h: In instantiation of ‘double minc::simple_volume::interpolate(float, float, float) const [with T = float]’: /<>/ezminc/examples/trilinear_resample.cpp:115:71: required from here /<>/ezminc/minc_io_simple_volume.h:327:23: warning: conversion from ‘float’ to ‘size_t’ {aka ‘unsigned int’} may change value [-Wfloat-conversion] 327 | size_t x=floor(_x); | ~~~~~^~~~ /<>/ezminc/minc_io_simple_volume.h:328:23: warning: conversion from ‘float’ to ‘size_t’ {aka ‘unsigned int’} may change value [-Wfloat-conversion] 328 | size_t y=floor(_y); | ~~~~~^~~~ /<>/ezminc/minc_io_simple_volume.h:329:23: warning: conversion from ‘float’ to ‘size_t’ {aka ‘unsigned int’} may change value [-Wfloat-conversion] 329 | size_t z=floor(_z); | ~~~~~^~~~ /<>/ezminc/minc_io_simple_volume.h:331:21: warning: conversion from ‘size_t’ {aka ‘unsigned int’} to ‘float’ may change value [-Wconversion] 331 | float dx=_x-x; | ^ /<>/ezminc/minc_io_simple_volume.h:332:21: warning: conversion from ‘size_t’ {aka ‘unsigned int’} to ‘float’ may change value [-Wconversion] 332 | float dy=_y-y; | ^ /<>/ezminc/minc_io_simple_volume.h:333:21: warning: conversion from ‘size_t’ {aka ‘unsigned int’} to ‘float’ may change value [-Wconversion] 333 | float dz=_z-z; | ^ [ 65%] Linking CXX executable trilinear_resample cd /<>/obj-arm-linux-gnueabi/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/trilinear_resample.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -o trilinear_resample -Wl,-rpath,/<>/obj-arm-linux-gnueabi/ezminc:/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 65%] Built target trilinear_resample make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/ezminc/tests /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/ezminc/tests /<>/obj-arm-linux-gnueabi/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/DependInfo.cmake --color= Scanning dependencies of target ezminc_rw_test2 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 65%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o cd /<>/obj-arm-linux-gnueabi/ezminc/tests && /usr/bin/arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -c /<>/ezminc/tests/minc_rw_test2.cpp /<>/ezminc/tests/minc_rw_test2.cpp: In function ‘int main(int, char**)’: /<>/ezminc/tests/minc_rw_test2.cpp:27:25: warning: conversion from ‘size_t’ {aka ‘unsigned int’} to ‘float’ may change value [-Wconversion] 27 | vol(x,y,z)=x+y+z; | ~~~^~ [ 66%] Linking CXX executable ezminc_rw_test2 cd /<>/obj-arm-linux-gnueabi/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test2.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -o ezminc_rw_test2 -Wl,-rpath,/<>/obj-arm-linux-gnueabi/ezminc:/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 66%] Built target ezminc_rw_test2 make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/ezminc/tests /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/ezminc/tests /<>/obj-arm-linux-gnueabi/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/DependInfo.cmake --color= Scanning dependencies of target ezminc_rw_test make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 67%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o cd /<>/obj-arm-linux-gnueabi/ezminc/tests && /usr/bin/arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -c /<>/ezminc/tests/ezminc_rw_test.cpp /<>/ezminc/tests/ezminc_rw_test.cpp: In instantiation of ‘void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]’: /<>/ezminc/tests/ezminc_rw_test.cpp:181:68: required from here /<>/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from ‘double’ to ‘__gnu_cxx::__alloc_traits, unsigned char>::value_type’ {aka ‘unsigned char’} may change value [-Wfloat-conversion] 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; | ^ /<>/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from ‘int’ to ‘__gnu_cxx::__alloc_traits, short int>::value_type’ {aka ‘short int’} may change value [-Wconversion] 59 | short_attr[i]=i; | ^ /<>/ezminc/tests/ezminc_rw_test.cpp: In instantiation of ‘void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]’: /<>/ezminc/tests/ezminc_rw_test.cpp:184:55: required from here /<>/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from ‘double’ to ‘__gnu_cxx::__alloc_traits, int>::value_type’ {aka ‘int’} may change value [-Wfloat-conversion] 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; | ^ /<>/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from ‘int’ to ‘__gnu_cxx::__alloc_traits, short int>::value_type’ {aka ‘short int’} may change value [-Wconversion] 59 | short_attr[i]=i; | ^ /<>/ezminc/tests/ezminc_rw_test.cpp: In instantiation of ‘void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = float; nc_type = int]’: /<>/ezminc/tests/ezminc_rw_test.cpp:187:61: required from here /<>/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from ‘double’ to ‘__gnu_cxx::__alloc_traits, float>::value_type’ {aka ‘float’} may change value [-Wfloat-conversion] 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; | ^ /<>/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from ‘int’ to ‘__gnu_cxx::__alloc_traits, short int>::value_type’ {aka ‘short int’} may change value [-Wconversion] 59 | short_attr[i]=i; | ^ /<>/ezminc/tests/ezminc_rw_test.cpp: In instantiation of ‘void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]’: /<>/ezminc/tests/ezminc_rw_test.cpp:190:64: required from here /<>/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from ‘int’ to ‘__gnu_cxx::__alloc_traits, short int>::value_type’ {aka ‘short int’} may change value [-Wconversion] [ 67%] Linking CXX executable ezminc_rw_test cd /<>/obj-arm-linux-gnueabi/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -o ezminc_rw_test -Wl,-rpath,/<>/obj-arm-linux-gnueabi/ezminc:/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 67%] Built target ezminc_rw_test make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc2-leak-test.dir/DependInfo.cmake --color= Scanning dependencies of target minc2-leak-test make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 67%] Building C object testdir/CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -c /<>/testdir/minc2-leak-test.c /<>/testdir/minc2-leak-test.c: In function ‘hdf5_check_objects’: /<>/testdir/minc2-leak-test.c:58:21: warning: conversion to ‘unsigned int’ from ‘ssize_t’ {aka ‘int’} may change the sign of the result [-Wsign-conversion] 58 | objs = malloc(cnt * sizeof(hid_t)); | ^ /<>/testdir/minc2-leak-test.c:60:46: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘ssize_t’ {aka ‘int’} may change the sign of the result [-Wsign-conversion] 60 | howmany = H5Fget_obj_ids(fid, H5F_OBJ_ALL, cnt, objs); | ^~~ /<>/testdir/minc2-leak-test.c: In function ‘leak_loop’: /<>/testdir/minc2-leak-test.c:113:40: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 113 | buffer = (double *) malloc( n_voxels * sizeof(double)); | ^ /<>/testdir/minc2-leak-test.c: In function ‘create_test_image’: /<>/testdir/minc2-leak-test.c:235:41: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 235 | buf = ( uint16_t * ) malloc ( nvoxels * sizeof ( uint16_t ) ); | ^ /<>/testdir/minc2-leak-test.c:253:16: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 253 | start[0] = i; | ^ /<>/testdir/minc2-leak-test.c: In function ‘main’: /<>/testdir/minc2-leak-test.c:306:46: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 306 | result = miget_dimension_sizes(dimensions, ndims, sizes); | ^~~~~ [ 68%] Linking C executable minc2-leak-test cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-leak-test.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -o minc2-leak-test -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 68%] Built target minc2-leak-test make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake --color= Scanning dependencies of target minc2-read-metadata make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 68%] Building C object testdir/CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -c /<>/testdir/minc2-read-metadata.c [ 69%] Linking C executable minc2-read-metadata cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-metadata.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -o minc2-read-metadata -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 69%] Built target minc2-read-metadata make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake --color= Scanning dependencies of target minc2-vector_dimension-test make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 70%] Building C object testdir/CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -c /<>/testdir/minc2-vector_dimension-test.c /<>/testdir/minc2-vector_dimension-test.c: In function ‘main’: /<>/testdir/minc2-vector_dimension-test.c:131:17: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 131 | coords[3] = i; | ^ /<>/testdir/minc2-vector_dimension-test.c:166:17: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 166 | coords[0] = i; | ^ [ 70%] Linking C executable minc2-vector_dimension-test cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-vector_dimension-test.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -o minc2-vector_dimension-test -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 70%] Built target minc2-vector_dimension-test make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc2-slice-test.dir/DependInfo.cmake --color= Scanning dependencies of target minc2-slice-test make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 71%] Building C object testdir/CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -c /<>/testdir/minc2-slice-test.c /<>/testdir/minc2-slice-test.c: In function ‘main’: /<>/testdir/minc2-slice-test.c:29:21: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 29 | coords[0] = i; /*Z*/ | ^ /<>/testdir/minc2-slice-test.c:30:21: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 30 | coords[1] = rand()%CX; /*X*/ | ^~~~ /<>/testdir/minc2-slice-test.c:31:21: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 31 | coords[2] = rand()%CY; /*Y*/ | ^~~~ [ 71%] Linking C executable minc2-slice-test cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-slice-test.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -o minc2-slice-test -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 71%] Built target minc2-slice-test make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake --color= Scanning dependencies of target minc2-record-test make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 72%] Building C object testdir/CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -c /<>/testdir/minc2-record-test.c /<>/testdir/minc2-record-test.c: In function ‘main’: /<>/testdir/minc2-record-test.c:85:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 85 | coords[0] = i; | ^ /<>/testdir/minc2-record-test.c:86:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 86 | coords[1] = j; | ^ /<>/testdir/minc2-record-test.c:87:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 87 | coords[2] = k; | ^ /<>/testdir/minc2-record-test.c:105:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 105 | coords[0] = i; | ^ /<>/testdir/minc2-record-test.c:106:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 106 | coords[1] = j; | ^ /<>/testdir/minc2-record-test.c:107:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 107 | coords[2] = k; | ^ [ 72%] Linking C executable minc2-record-test cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-record-test.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -o minc2-record-test -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 72%] Built target minc2-record-test make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/test_mconv.dir/DependInfo.cmake --color= Scanning dependencies of target test_mconv make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 73%] Building C object testdir/CMakeFiles/test_mconv.dir/test_mconv.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_mconv.dir/test_mconv.c.o -c /<>/testdir/test_mconv.c [ 73%] Linking C executable test_mconv cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_mconv.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_mconv.dir/test_mconv.c.o -o test_mconv -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 73%] Built target test_mconv make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake --color= Scanning dependencies of target minc_types make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 73%] Building C object testdir/CMakeFiles/minc_types.dir/minc_types.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_types.dir/minc_types.c.o -c /<>/testdir/minc_types.c [ 74%] Linking C executable minc_types cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_types.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_types.dir/minc_types.c.o -o minc_types -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 74%] Built target minc_types make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/icv_dim.dir/DependInfo.cmake --color= Scanning dependencies of target icv_dim make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 74%] Building C object testdir/CMakeFiles/icv_dim.dir/icv_dim.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim.dir/icv_dim.c.o -c /<>/testdir/icv_dim.c [ 75%] Linking C executable icv_dim cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim.dir/icv_dim.c.o -o icv_dim -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 75%] Built target icv_dim make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake --color= Scanning dependencies of target minc2-datatype-test make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 75%] Building C object testdir/CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -c /<>/testdir/minc2-datatype-test.c [ 76%] Linking C executable minc2-datatype-test cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-datatype-test.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -o minc2-datatype-test -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 76%] Built target minc2-datatype-test make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc2-volprops-test.dir/DependInfo.cmake --color= Scanning dependencies of target minc2-volprops-test make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 76%] Building C object testdir/CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -c /<>/testdir/minc2-volprops-test.c [ 77%] Linking C executable minc2-volprops-test cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-volprops-test.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -o minc2-volprops-test -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 77%] Built target minc2-volprops-test make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc_conversion.dir/DependInfo.cmake --color= Scanning dependencies of target minc_conversion make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 77%] Building C object testdir/CMakeFiles/minc_conversion.dir/minc_conversion.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_conversion.dir/minc_conversion.c.o -c /<>/testdir/minc_conversion.c /<>/testdir/minc_conversion.c: In function ‘test2’: /<>/testdir/minc_conversion.c:156:24: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 156 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /<>/testdir/minc_conversion.c:156:41: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 156 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /<>/testdir/minc_conversion.c:156:51: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 156 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /<>/testdir/minc_conversion.c: In function ‘test3’: /<>/testdir/minc_conversion.c:192:11: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 192 | total *= dims[i].length; | ^~ /<>/testdir/minc_conversion.c:263:24: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 263 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /<>/testdir/minc_conversion.c:263:41: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 263 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /<>/testdir/minc_conversion.c:263:51: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 263 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /<>/testdir/minc_conversion.c: In function ‘test4’: /<>/testdir/minc_conversion.c:351:62: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 351 | buffer=flt_ptr=malloc(sizeof(float)*my_sizes[0]*my_sizes[1]*my_sizes[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc_conversion.c:368:21: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘float’ may change value [-Wconversion] 368 | float tmp = (i * 10000) + (j * 100) + k; | ^ [ 78%] Linking C executable minc_conversion cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_conversion.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_conversion.dir/minc_conversion.c.o -o minc_conversion -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 78%] Built target minc_conversion make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc2-read-rgb.dir/DependInfo.cmake --color= Scanning dependencies of target minc2-read-rgb make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 78%] Building C object testdir/CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -c /<>/testdir/minc2-read-rgb.c /<>/testdir/minc2-read-rgb.c: In function ‘calculate_mean_f’: /<>/testdir/minc2-read-rgb.c:23:13: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 23 | return avg/length; | ^ /<>/testdir/minc2-read-rgb.c: In function ‘calculate_mean_s’: /<>/testdir/minc2-read-rgb.c:33:13: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 33 | return avg/length; | ^ /<>/testdir/minc2-read-rgb.c: In function ‘calculate_mean_d’: /<>/testdir/minc2-read-rgb.c:43:13: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 43 | return avg/length; | ^ /<>/testdir/minc2-read-rgb.c: In function ‘main’: /<>/testdir/minc2-read-rgb.c:116:37: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 116 | dim= malloc(sizeof(midimhandle_t)*ndim); | ^ /<>/testdir/minc2-read-rgb.c:117:32: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 117 | sizes=malloc(sizeof(misize_t)*ndim); | ^ /<>/testdir/minc2-read-rgb.c:118:31: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 118 | origin=malloc(sizeof(double)*ndim); | ^ /<>/testdir/minc2-read-rgb.c:119:29: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 119 | step=malloc(sizeof(double)*ndim); | ^ /<>/testdir/minc2-read-rgb.c:129:36: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 129 | r = miget_dimension_sizes ( dim, ndim, sizes ); | ^~~~ /<>/testdir/minc2-read-rgb.c:134:53: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 134 | r = miget_dimension_separations(dim,MI_ORDER_FILE,ndim,step); | ^~~~ /<>/testdir/minc2-read-rgb.c:197:68: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 197 | f_full=malloc(sizeof(float)*my_sizes[0]*my_sizes[1]*my_sizes[2]*my_sizes[3]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:224:69: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 224 | f_axial=malloc(sizeof(float)*my_count[0]*my_count[1]*my_count[2]*my_count[3]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:238:72: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 238 | f_sagittal=malloc(sizeof(float)*my_count[0]*my_count[1]*my_count[2]*my_count[3]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:250:71: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 250 | f_coronal=malloc(sizeof(float)*my_count[0]*my_count[1]*my_count[2]*my_count[3]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:262:68: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 262 | s_full=malloc(sizeof(short)*my_sizes[0]*my_sizes[1]*my_sizes[2]*my_sizes[3]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:280:69: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 280 | s_axial=malloc(sizeof(short)*my_count[0]*my_count[1]*my_count[2]*my_count[3]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:292:72: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 292 | s_sagittal=malloc(sizeof(short)*my_count[0]*my_count[1]*my_count[2]*my_count[3]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:305:71: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 305 | s_coronal=malloc(sizeof(short)*my_count[0]*my_count[1]*my_count[2]*my_count[3]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:316:69: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 316 | d_full=malloc(sizeof(double)*my_sizes[0]*my_sizes[1]*my_sizes[2]*my_sizes[3]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:366:56: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 366 | f_full=malloc(sizeof(float)*my_sizes[0]*my_sizes[1]*my_sizes[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:384:57: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 384 | f_axial=malloc(sizeof(float)*my_count[0]*my_count[1]*my_count[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:398:60: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 398 | f_sagittal=malloc(sizeof(float)*my_count[0]*my_count[1]*my_count[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:410:59: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 410 | f_coronal=malloc(sizeof(float)*my_count[0]*my_count[1]*my_count[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:429:57: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 429 | s_axial=malloc(sizeof(short)*my_count[0]*my_count[1]*my_count[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:432:56: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 432 | s_full=malloc(sizeof(short)*my_sizes[0]*my_sizes[1]*my_sizes[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:451:60: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 451 | s_sagittal=malloc(sizeof(short)*my_count[0]*my_count[1]*my_count[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:464:59: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 464 | s_coronal=malloc(sizeof(short)*my_count[0]*my_count[1]*my_count[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:475:57: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 475 | d_full=malloc(sizeof(double)*my_sizes[0]*my_sizes[1]*my_sizes[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 78%] Linking C executable minc2-read-rgb cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-rgb.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -o minc2-read-rgb -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 78%] Built target minc2-read-rgb make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake --color= Scanning dependencies of target minc_long_attr make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 78%] Building C object testdir/CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -c /<>/testdir/minc_long_attr.c /<>/testdir/minc_long_attr.c: In function ‘test1’: /<>/testdir/minc_long_attr.c:125:32: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 125 | ip->large_attribute=calloc(ip->attribute_size,sizeof(char)); | ~~^~~~~~~~~~~~~~~~ /<>/testdir/minc_long_attr.c:126:52: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 126 | memset(ip->large_attribute,'X',ip->attribute_size-1); | ~~~~~~~~~~~~~~~~~~^~ /<>/testdir/minc_long_attr.c: In function ‘test3’: /<>/testdir/minc_long_attr.c:207:11: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 207 | total *= dims[i].length; | ^~ /<>/testdir/minc_long_attr.c:257:14: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 257 | att=malloc(att_length); | ^~~~~~~~~~ /<>/testdir/minc_long_attr.c:262:37: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 262 | if(memcmp(att,ip->large_attribute,att_length)!=0) | ^~~~~~~~~~ [ 79%] Linking C executable minc_long_attr cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_long_attr.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -o minc_long_attr -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 79%] Built target minc_long_attr make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake --color= Scanning dependencies of target mincapi make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 79%] Building C object testdir/CMakeFiles/mincapi.dir/mincapi.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/mincapi.dir/mincapi.c.o -c /<>/testdir/mincapi.c /<>/testdir/mincapi.c: In function ‘test3’: /<>/testdir/mincapi.c:209:11: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 209 | total *= dims[i].length; | ^~ /<>/testdir/mincapi.c: In function ‘test4’: /<>/testdir/mincapi.c:269:11: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 269 | total *= dims[i].length; | ^~ /<>/testdir/mincapi.c:352:14: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 352 | float tmp = (i * 10000) + (j * 100) + k; | ^ /<>/testdir/mincapi.c: In function ‘test5’: /<>/testdir/mincapi.c:409:9: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 409 | total *= dims[TST_X].length; | ^~ /<>/testdir/mincapi.c:410:9: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 410 | total *= dims[TST_Y].length + YBOOST; | ^~ /<>/testdir/mincapi.c:411:9: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 411 | total *= dims[TST_Z].length + ZBOOST; | ^~ /<>/testdir/mincapi.c: In function ‘test7’: /<>/testdir/mincapi.c:644:11: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 644 | total *= dims[i].length; | ^~ [ 80%] Linking C executable mincapi cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincapi.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/mincapi.dir/mincapi.c.o -o mincapi -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 80%] Built target mincapi make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake --color= Scanning dependencies of target test_xfm make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 81%] Building C object testdir/CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -c /<>/testdir/vio_xfm_test/test-xfm.c [ 81%] Linking C executable test_xfm cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_xfm.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -o test_xfm -Wl,-rpath,/usr/lib/arm-linux-gnueabi/hdf5/serial:/<>/obj-arm-linux-gnueabi /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 81%] Built target test_xfm make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/icv_range.dir/DependInfo.cmake --color= Scanning dependencies of target icv_range make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 82%] Building C object testdir/CMakeFiles/icv_range.dir/icv_range.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_range.dir/icv_range.c.o -c /<>/testdir/icv_range.c [ 82%] Linking C executable icv_range cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_range.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_range.dir/icv_range.c.o -o icv_range -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 82%] Built target icv_range make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/icv_vec.dir/DependInfo.cmake --color= Scanning dependencies of target icv_vec make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 83%] Building C object testdir/CMakeFiles/icv_vec.dir/icv_vec.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_vec.dir/icv_vec.c.o -c /<>/testdir/icv_vec.c /<>/testdir/icv_vec.c: In function ‘test_icv_vector’: /<>/testdir/icv_vec.c:65:41: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 65 | short int *ivalue = malloc(N_ELEMENTS * sizeof(short int)); | ^ /<>/testdir/icv_vec.c:66:38: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 66 | double *dvalue = malloc(N_ELEMENTS * sizeof(double)); | ^ /<>/testdir/icv_vec.c:41:24: warning: conversion from ‘int’ to ‘short int’ may change value [-Wconversion] 41 | #define TVAL(z,y,x,v) ((z)*1000+(y)*100+(x)*10+(v)) | ^ /<>/testdir/icv_vec.c:126:23: note: in expansion of macro ‘TVAL’ 126 | ivalue[c] = TVAL(i, j, k, v); | ^~~~ [ 83%] Linking C executable icv_vec cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_vec.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_vec.dir/icv_vec.c.o -o icv_vec -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 83%] Built target icv_vec make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/icv_fillvalue.dir/DependInfo.cmake --color= Scanning dependencies of target icv_fillvalue make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 83%] Building C object testdir/CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -c /<>/testdir/icv_fillvalue.c [ 83%] Linking C executable icv_fillvalue cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_fillvalue.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -o icv_fillvalue -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 83%] Built target icv_fillvalue make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake --color= Scanning dependencies of target minc2-grpattr-test make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 83%] Building C object testdir/CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -c /<>/testdir/minc2-grpattr-test.c [ 83%] Linking C executable minc2-grpattr-test cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-grpattr-test.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -o minc2-grpattr-test -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 83%] Built target minc2-grpattr-test make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc_tst.dir/DependInfo.cmake --color= Scanning dependencies of target minc_tst make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 83%] Building C object testdir/CMakeFiles/minc_tst.dir/minc.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_tst.dir/minc.c.o -c /<>/testdir/minc.c [ 84%] Linking C executable minc_tst cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_tst.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_tst.dir/minc.c.o -o minc_tst -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 84%] Built target minc_tst make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/multidim_test.dir/DependInfo.cmake --color= Scanning dependencies of target multidim_test make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 84%] Building C object testdir/CMakeFiles/multidim_test.dir/multidim_test.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/multidim_test.dir/multidim_test.c.o -c /<>/testdir/multidim_test.c [ 84%] Linking C executable multidim_test cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/multidim_test.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/multidim_test.dir/multidim_test.c.o -o multidim_test -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 84%] Built target multidim_test make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake --color= Scanning dependencies of target minc2-label-test make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 85%] Building C object testdir/CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -c /<>/testdir/minc2-label-test.c /<>/testdir/minc2-label-test.c: In function ‘create_label_image’: /<>/testdir/minc2-label-test.c:110:21: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 110 | coords[0] = i; | ^ /<>/testdir/minc2-label-test.c:111:21: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 111 | coords[1] = j; | ^ /<>/testdir/minc2-label-test.c:112:21: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 112 | coords[2] = k; | ^ [ 85%] Linking C executable minc2-label-test cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-label-test.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -o minc2-label-test -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 85%] Built target minc2-label-test make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake --color= Scanning dependencies of target create_grid_xfm make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 86%] Building C object testdir/CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -c /<>/testdir/create_grid_xfm.c [ 86%] Linking C executable create_grid_xfm cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_xfm.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -o create_grid_xfm -Wl,-rpath,/usr/lib/arm-linux-gnueabi/hdf5/serial:/<>/obj-arm-linux-gnueabi /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 86%] Built target create_grid_xfm make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/icv.dir/DependInfo.cmake --color= Scanning dependencies of target icv make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 86%] Building C object testdir/CMakeFiles/icv.dir/icv.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv.dir/icv.c.o -c /<>/testdir/icv.c [ 87%] Linking C executable icv cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv.dir/icv.c.o -o icv -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 87%] Built target icv make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake --color= Scanning dependencies of target verify_xfm make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 87%] Building C object testdir/CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -c /<>/testdir/vio_xfm_test/verify_xfm.c [ 88%] Linking C executable verify_xfm cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/verify_xfm.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -o verify_xfm -Wl,-rpath,/usr/lib/arm-linux-gnueabi/hdf5/serial:/<>/obj-arm-linux-gnueabi /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 88%] Built target verify_xfm make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/icv_dim1.dir/DependInfo.cmake --color= Scanning dependencies of target icv_dim1 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 88%] Building C object testdir/CMakeFiles/icv_dim1.dir/icv_dim1.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim1.dir/icv_dim1.c.o -c /<>/testdir/icv_dim1.c [ 89%] Linking C executable icv_dim1 cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim1.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim1.dir/icv_dim1.c.o -o icv_dim1 -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 89%] Built target icv_dim1 make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc2-convert-test.dir/DependInfo.cmake --color= Scanning dependencies of target minc2-convert-test make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 90%] Building C object testdir/CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -c /<>/testdir/minc2-convert-test.c /<>/testdir/minc2-convert-test.c: In function ‘main’: /<>/testdir/minc2-convert-test.c:97:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 97 | coords[0] = i; | ^ /<>/testdir/minc2-convert-test.c:98:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 98 | coords[1] = j; | ^ /<>/testdir/minc2-convert-test.c:99:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 99 | coords[2] = k; | ^ /<>/testdir/minc2-convert-test.c:101:28: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 101 | voxel[0] = coords[0]; | ^~~~~~ /<>/testdir/minc2-convert-test.c:102:28: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 102 | voxel[1] = coords[1]; | ^~~~~~ /<>/testdir/minc2-convert-test.c:103:28: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 103 | voxel[2] = coords[2]; | ^~~~~~ [ 90%] Linking C executable minc2-convert-test cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-convert-test.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -o minc2-convert-test -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 90%] Built target minc2-convert-test make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake --color= Scanning dependencies of target minc2-multires-test make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 90%] Building C object testdir/CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -c /<>/testdir/minc2-multires-test.c /<>/testdir/minc2-multires-test.c: In function ‘main’: /<>/testdir/minc2-multires-test.c:79:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 79 | coords[0] = i; | ^ /<>/testdir/minc2-multires-test.c:80:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 80 | coords[1] = j; | ^ /<>/testdir/minc2-multires-test.c:81:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 81 | coords[2] = k; | ^ /<>/testdir/minc2-multires-test.c:83:25: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 83 | voxel = i*10000 + j*100 + k; | ^ [ 91%] Linking C executable minc2-multires-test cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-multires-test.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -o minc2-multires-test -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 91%] Built target minc2-multires-test make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake --color= Scanning dependencies of target minc2-create-test-images-2 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 91%] Building C object testdir/CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -c /<>/testdir/minc2-create-test-images-2.c /<>/testdir/minc2-create-test-images-2.c: In function ‘create_real_as_int_image’: /<>/testdir/minc2-create-test-images-2.c:78:16: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 78 | start[0] = i; | ^ /<>/testdir/minc2-create-test-images-2.c: In function ‘create_real_as_float_image’: /<>/testdir/minc2-create-test-images-2.c:143:17: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 143 | buf[i] = i * 0.001f; | ^ /<>/testdir/minc2-create-test-images-2.c:154:16: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 154 | start[0] = i; | ^ [ 92%] Linking C executable minc2-create-test-images-2 cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images-2.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -o minc2-create-test-images-2 -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 92%] Built target minc2-create-test-images-2 make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake --color= Scanning dependencies of target minc2-create-test-images make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 92%] Building C object testdir/CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -c /<>/testdir/minc2-create-test-images.c /<>/testdir/minc2-create-test-images.c: In function ‘create_3D_image’: /<>/testdir/minc2-create-test-images.c:137:16: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 137 | start[0] = i; | ^ /<>/testdir/minc2-create-test-images.c: In function ‘create_4D_image’: /<>/testdir/minc2-create-test-images.c:210:16: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 210 | start[0] = i; | ^ /<>/testdir/minc2-create-test-images.c:212:18: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 212 | start[1] = j; | ^ [ 93%] Linking C executable minc2-create-test-images cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -o minc2-create-test-images -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 93%] Built target minc2-create-test-images make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake --color= Scanning dependencies of target test_arg_parse make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 94%] Building C object testdir/CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -c /<>/testdir/test_arg_parse.c [ 94%] Linking C executable test_arg_parse cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_arg_parse.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -o test_arg_parse -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 94%] Built target test_arg_parse make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake --color= Scanning dependencies of target minc2-large-attribute make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 95%] Building C object testdir/CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -c /<>/testdir/minc2-large-attribute.c /<>/testdir/minc2-large-attribute.c: In function ‘create_3D_image’: /<>/testdir/minc2-large-attribute.c:84:16: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 84 | start[0] = i; | ^ /<>/testdir/minc2-large-attribute.c:90:20: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 90 | attribute=malloc(attribute_size); | ^~~~~~~~~~~~~~ /<>/testdir/minc2-large-attribute.c:91:38: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 91 | memset(attribute,'Z',attribute_size-1); | ~~~~~~~~~~~~~~^~ /<>/testdir/minc2-large-attribute.c:94:55: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 94 | miset_attr_values(hvol,MI_TYPE_STRING,"test","test",attribute_size,attribute); | ^~~~~~~~~~~~~~ [ 95%] Linking C executable minc2-large-attribute cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-large-attribute.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -o minc2-large-attribute -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 95%] Built target minc2-large-attribute make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc2-valid-test.dir/DependInfo.cmake --color= Scanning dependencies of target minc2-valid-test make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 96%] Building C object testdir/CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -c /<>/testdir/minc2-valid-test.c [ 96%] Linking C executable minc2-valid-test cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-valid-test.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -o minc2-valid-test -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 96%] Built target minc2-valid-test make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake --color= Scanning dependencies of target minc2-full-test make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 96%] Building C object testdir/CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -c /<>/testdir/minc2-full-test.c /<>/testdir/minc2-full-test.c: In function ‘test1’: /<>/testdir/minc2-full-test.c:111:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 111 | coords[0] = i; | ^ /<>/testdir/minc2-full-test.c:112:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 112 | coords[1] = j; | ^ /<>/testdir/minc2-full-test.c:113:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 113 | coords[2] = k; | ^ /<>/testdir/minc2-full-test.c: In function ‘test2’: /<>/testdir/minc2-full-test.c:227:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 227 | coords[0] = i; | ^ /<>/testdir/minc2-full-test.c:228:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 228 | coords[1] = j; | ^ /<>/testdir/minc2-full-test.c:229:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 229 | coords[2] = k; | ^ /<>/testdir/minc2-full-test.c:231:30: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 231 | fcmpl.real = (i * 100) + j; | ^ /<>/testdir/minc2-full-test.c:232:30: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 232 | fcmpl.imag = k; | ^ /<>/testdir/minc2-full-test.c:249:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 249 | coords[0] = i; | ^ /<>/testdir/minc2-full-test.c:250:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 250 | coords[1] = j; | ^ /<>/testdir/minc2-full-test.c:251:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 251 | coords[2] = k; | ^ [ 97%] Linking C executable minc2-full-test cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-full-test.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -o minc2-full-test -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 97%] Built target minc2-full-test make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake --color= Scanning dependencies of target volume_test make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 97%] Building C object testdir/CMakeFiles/volume_test.dir/volume_test.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_test.dir/volume_test.c.o -c /<>/testdir/volume_test.c [ 98%] Linking C executable volume_test cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_test.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_test.dir/volume_test.c.o -o volume_test -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 98%] Built target volume_test make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/copy_xfm.dir/DependInfo.cmake --color= Scanning dependencies of target copy_xfm make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 98%] Building C object testdir/CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -c /<>/testdir/vio_xfm_test/copy-xfm.c [ 98%] Linking C executable copy_xfm cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/copy_xfm.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -o copy_xfm -Wl,-rpath,/usr/lib/arm-linux-gnueabi/hdf5/serial:/<>/obj-arm-linux-gnueabi /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 98%] Built target copy_xfm make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake --color= Scanning dependencies of target minc2-hyper-test-2 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 99%] Building C object testdir/CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -c /<>/testdir/minc2-hyper-test-2.c /<>/testdir/minc2-hyper-test-2.c: In function ‘create_test_file’: /<>/testdir/minc2-hyper-test-2.c:72:16: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 72 | start[0] = i; | ^ /<>/testdir/minc2-hyper-test-2.c: In function ‘main’: /<>/testdir/minc2-hyper-test-2.c:145:65: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 145 | buffer = ( double * ) malloc ( count[0] * count[1] * count[2] * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ [ 99%] Linking C executable minc2-hyper-test-2 cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test-2.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -o minc2-hyper-test-2 -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 99%] Built target minc2-hyper-test-2 make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/testdir /<>/obj-arm-linux-gnueabi/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake --color= Scanning dependencies of target minc2-hyper-test make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [100%] Building C object testdir/CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-arm-linux-gnueabi -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -c /<>/testdir/minc2-hyper-test.c /<>/testdir/minc2-hyper-test.c: In function ‘create_and_test_image’: /<>/testdir/minc2-hyper-test.c:89:26: warning: conversion to ‘short unsigned int’ from ‘short int’ may change the sign of the result [-Wsign-conversion] 89 | stmp2[i][j][k] = (short)((i*XP)+(j*YP)+(k*ZP)); | ^ /<>/testdir/minc2-hyper-test.c:261:20: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 261 | start[0] = i; | ^ /<>/testdir/minc2-hyper-test.c:262:20: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 262 | start[1] = j; | ^ /<>/testdir/minc2-hyper-test.c:263:20: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 263 | start[2] = k; | ^ /<>/testdir/minc2-hyper-test.c: In function ‘test1’: /<>/testdir/minc2-hyper-test.c:393:31: warning: conversion to ‘short int’ from ‘short unsigned int’ may change the sign of the result [-Wsign-conversion] 393 | short t = stemp[i][j][k]; | ^~~~~ /<>/testdir/minc2-hyper-test.c:418:31: warning: conversion to ‘short int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 418 | short t = stemp[i][j][k] ^ 0x5555; | ^~~~~ /<>/testdir/minc2-hyper-test.c:424:38: warning: conversion to ‘short unsigned int’ from ‘short int’ may change the sign of the result [-Wsign-conversion] 424 | stemp[i][j][k] = t; | ^ /<>/testdir/minc2-hyper-test.c:458:31: warning: conversion to ‘short int’ from ‘short unsigned int’ may change the sign of the result [-Wsign-conversion] 458 | short t = stmp2[i][j][k]; | ^~~~~ /<>/testdir/minc2-hyper-test.c: In function ‘test3’: /<>/testdir/minc2-hyper-test.c:814:28: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 814 | start[0] = i; | ^ /<>/testdir/minc2-hyper-test.c:815:28: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 815 | start[1] = j; | ^ /<>/testdir/minc2-hyper-test.c:816:28: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 816 | start[2] = k; | ^ [100%] Linking C executable minc2-hyper-test cd /<>/obj-arm-linux-gnueabi/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -o minc2-hyper-test -Wl,-rpath,/<>/obj-arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabi/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [100%] Built target minc2-hyper-test make[2]: Leaving directory '/<>/obj-arm-linux-gnueabi' /usr/bin/cmake -E cmake_progress_start /<>/obj-arm-linux-gnueabi/CMakeFiles 0 make[1]: Leaving directory '/<>/obj-arm-linux-gnueabi' create-stamp debian/debhelper-build-stamp dh_testroot -a dh_prep -a dh_auto_install -a cd obj-arm-linux-gnueabi && make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/obj-arm-linux-gnueabi' /usr/bin/cmake -S/<> -B/<>/obj-arm-linux-gnueabi --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/obj-arm-linux-gnueabi' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/obj-arm-linux-gnueabi' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /<>/debian/tmp/usr/lib/arm-linux-gnueabi/libminc2.so.5.2.0 -- Set runtime path of "/<>/debian/tmp/usr/lib/arm-linux-gnueabi/libminc2.so.5.2.0" to "" -- Installing: /<>/debian/tmp/usr/lib/arm-linux-gnueabi/libminc2.so -- Installing: /<>/debian/tmp/usr/include/minc2.h -- Installing: /<>/debian/tmp/usr/include/minc2_defs.h -- Installing: /<>/debian/tmp/usr/include/minc2_structs.h -- Installing: /<>/debian/tmp/usr/include/minc2_api.h -- Installing: /<>/debian/tmp/usr/include/minc2_error.h -- Installing: /<>/debian/tmp/usr/include/minc_config.h -- Installing: /<>/debian/tmp/usr/include/minc_error.h -- Installing: /<>/debian/tmp/usr/include/ParseArgv.h -- Installing: /<>/debian/tmp/usr/include/read_file_names.h -- Installing: /<>/debian/tmp/usr/include/restructure.h -- Installing: /<>/debian/tmp/usr/include/time_stamp.h -- Installing: /<>/debian/tmp/usr/include/minc_common_defs.h -- Installing: /<>/debian/tmp/usr/include/volume_io.h -- Installing: /<>/debian/tmp/usr/include/minc.h -- Installing: /<>/debian/tmp/usr/include/voxel_loop.h -- Installing: /<>/debian/tmp/usr/include/nd_loop.h -- Installing: /<>/debian/tmp/usr/include/minc_compat.h -- Installing: /<>/debian/tmp/usr/include/minc_simple.h -- Installing: /<>/debian/tmp/usr/include/minc_format_convert.h -- Installing: /<>/debian/tmp/usr/include/volume_io/alloc.h -- Installing: /<>/debian/tmp/usr/include/volume_io/arrays.h -- Installing: /<>/debian/tmp/usr/include/volume_io/basic.h -- Installing: /<>/debian/tmp/usr/include/volume_io/def_math.h -- Installing: /<>/debian/tmp/usr/include/volume_io/files.h -- Installing: /<>/debian/tmp/usr/include/volume_io/geom_structs.h -- Installing: /<>/debian/tmp/usr/include/volume_io/geometry.h -- Installing: /<>/debian/tmp/usr/include/volume_io/multidim.h -- Installing: /<>/debian/tmp/usr/include/volume_io/progress.h -- Installing: /<>/debian/tmp/usr/include/volume_io/string_funcs.h -- Installing: /<>/debian/tmp/usr/include/volume_io/system_dependent.h -- Installing: /<>/debian/tmp/usr/include/volume_io/transforms.h -- Installing: /<>/debian/tmp/usr/include/volume_io/vol_io_prototypes.h -- Installing: /<>/debian/tmp/usr/include/volume_io/volume.h -- Installing: /<>/debian/tmp/usr/include/volume_io/volume_cache.h -- Installing: /<>/debian/tmp/usr/lib/arm-linux-gnueabi/cmake/UseLIBMINC.cmake -- Installing: /<>/debian/tmp/usr/lib/arm-linux-gnueabi/cmake/LIBMINCConfig.cmake -- Installing: /<>/debian/tmp/usr/lib/arm-linux-gnueabi/libminc_io.so.5.2.0 -- Set runtime path of "/<>/debian/tmp/usr/lib/arm-linux-gnueabi/libminc_io.so.5.2.0" to "" -- Installing: /<>/debian/tmp/usr/lib/arm-linux-gnueabi/libminc_io.so -- Installing: /<>/debian/tmp/usr/include/minc_io_exceptions.h -- Installing: /<>/debian/tmp/usr/include/minc_io_fixed_vector.h -- Installing: /<>/debian/tmp/usr/include/minc_io_simple_volume.h -- Installing: /<>/debian/tmp/usr/include/minc_1_rw.h -- Installing: /<>/debian/tmp/usr/include/minc_1_simple.h -- Installing: /<>/debian/tmp/usr/include/minc_1_simple_rw.h -- Installing: /<>/debian/tmp/usr/include/minc_io_4d_volume.h make[1]: Leaving directory '/<>/obj-arm-linux-gnueabi' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a -a dwz: debian/libminc2-5.2.0/usr/lib/arm-linux-gnueabi/libminc2.so.5.2.0: DWARF compression not beneficial - old size 434149 new size 451719 dwz: debian/libminc2-5.2.0/usr/lib/arm-linux-gnueabi/libminc_io.so.5.2.0: DWARF compression not beneficial - old size 340838 new size 341878 dh_strip -a -a dh_makeshlibs -a -a dh_shlibdeps -a -a dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libminc2-5.2.0/usr/lib/arm-linux-gnueabi/libminc_io.so.5.2.0 found in none of the libraries dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'libminc2-5.2.0' in '../libminc2-5.2.0_2.4.03-3_armel.deb'. dpkg-deb: building package 'libminc2-5.2.0-dbgsym' in '../libminc2-5.2.0-dbgsym_2.4.03-3_armel.deb'. dpkg-deb: building package 'libminc-dev' in '../libminc-dev_2.4.03-3_armel.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../libminc_2.4.03-3_armel.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-11-20T22:47:16Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libminc_2.4.03-3_armel.changes: ------------------------------- Format: 1.8 Date: Wed, 18 Nov 2020 09:07:03 +0100 Source: libminc Binary: libminc-dev libminc2-5.2.0 libminc2-5.2.0-dbgsym Built-For-Profiles: cross nocheck Architecture: armel Version: 2.4.03-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: libminc-dev - MNI medical image format development environment libminc2-5.2.0 - MNI medical image format library Changes: libminc (2.4.03-3) unstable; urgency=medium . * Standards-Version: 4.5.1 (routine-update) * debhelper-compat 13 (routine-update) * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target (routine- update) * Remove trailing whitespace in debian/changelog (routine-update) * Remove trailing whitespace in debian/control (routine-update) * Remove trailing whitespace in debian/copyright (routine-update) * Remove trailing whitespace in debian/rules (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * No tab in license text (routine-update) * watch file standard 4 (routine-update) Checksums-Sha1: d82fad247a9d1c6d80540f1743adaf6be778bdb9 73772 libminc-dev_2.4.03-3_armel.deb c5ab146fe2819d3310d32598dfc5af99e07be374 683612 libminc2-5.2.0-dbgsym_2.4.03-3_armel.deb 329f18dbca67fd3474e33c6c2db915ae3e211fa2 205456 libminc2-5.2.0_2.4.03-3_armel.deb e5a296c20e2d231ce6b0aa0ac9548e83c316d91d 6761 libminc_2.4.03-3_armel.buildinfo Checksums-Sha256: b723f2345586ab938ee9dca714f237e5479dfed325ddab8ae71295fbf411f3f6 73772 libminc-dev_2.4.03-3_armel.deb 04d6ccc6af162629af5d19a9b1522be9add975ada28ca7c492f55f8f547b5430 683612 libminc2-5.2.0-dbgsym_2.4.03-3_armel.deb 8531d7624d27ff8597de7fc2e440b0ebe69ce5bb774b032b2d44be1321157526 205456 libminc2-5.2.0_2.4.03-3_armel.deb fe5ddfa6e672ca4b7d40b37b8897b6bc927709ac7ec52898b25238e009fd1194 6761 libminc_2.4.03-3_armel.buildinfo Files: a2772b49f0c61267b8133cc5d95af390 73772 libdevel optional libminc-dev_2.4.03-3_armel.deb 10bc582483ef9214e234dc6333c47282 683612 debug optional libminc2-5.2.0-dbgsym_2.4.03-3_armel.deb 0a7c9ecd6f495d2b811889c6ae13ed1b 205456 libs optional libminc2-5.2.0_2.4.03-3_armel.deb 55e29cb712ba65babbb4dceaf322186c 6761 science optional libminc_2.4.03-3_armel.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: libminc Binary: libminc-dev libminc2-5.2.0 libminc2-5.2.0-dbgsym Architecture: armel Version: 2.4.03-3 Checksums-Md5: a2772b49f0c61267b8133cc5d95af390 73772 libminc-dev_2.4.03-3_armel.deb 10bc582483ef9214e234dc6333c47282 683612 libminc2-5.2.0-dbgsym_2.4.03-3_armel.deb 0a7c9ecd6f495d2b811889c6ae13ed1b 205456 libminc2-5.2.0_2.4.03-3_armel.deb Checksums-Sha1: d82fad247a9d1c6d80540f1743adaf6be778bdb9 73772 libminc-dev_2.4.03-3_armel.deb c5ab146fe2819d3310d32598dfc5af99e07be374 683612 libminc2-5.2.0-dbgsym_2.4.03-3_armel.deb 329f18dbca67fd3474e33c6c2db915ae3e211fa2 205456 libminc2-5.2.0_2.4.03-3_armel.deb Checksums-Sha256: b723f2345586ab938ee9dca714f237e5479dfed325ddab8ae71295fbf411f3f6 73772 libminc-dev_2.4.03-3_armel.deb 04d6ccc6af162629af5d19a9b1522be9add975ada28ca7c492f55f8f547b5430 683612 libminc2-5.2.0-dbgsym_2.4.03-3_armel.deb 8531d7624d27ff8597de7fc2e440b0ebe69ce5bb774b032b2d44be1321157526 205456 libminc2-5.2.0_2.4.03-3_armel.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Fri, 20 Nov 2020 22:47:15 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11.1), automake (= 1:1.16.2-4), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.48), bash (= 5.1~rc2-1), binutils (= 2.35.1-3), binutils-common (= 2.35.1-3), binutils-x86-64-linux-gnu (= 2.35.1-3), bsdextrautils (= 2.36.1-1), bsdutils (= 1:2.36.1-1), build-essential (= 12.8), bzip2 (= 1.0.8-4), cmake (= 3.18.4-1), cmake-data (= 3.18.4-1), coreutils (= 8.32-4+b1), cpp (= 4:10.2.0-1), cpp-10 (= 10.2.0-18), dash (= 0.5.11+git20200708+dd9ef66-2), debconf (= 1.5.74), debhelper (= 13.2.1), debianutils (= 4.11.2), dh-autoreconf (= 19), dh-exec (= 0.23.2), dh-strip-nondeterminism (= 1.9.0-1), diffutils (= 1:3.7-3), dpkg (= 1.20.5), dpkg-dev (= 1.20.5), dwz (= 0.13-5), file (= 1:5.39-3), findutils (= 4.7.0+git20201010-2), g++ (= 4:10.2.0-1), g++-10 (= 10.2.0-18), gcc (= 4:10.2.0-1), gcc-10 (= 10.2.0-18), gcc-10-base (= 10.2.0-18), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), grep (= 3.6-1), groff-base (= 1.22.4-5), gzip (= 1.10-2), hdf5-helpers (= 1.10.6+repack-2), hostname (= 3.23), init-system-helpers (= 1.59), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libaec-dev (= 1.0.4-1), libaec0 (= 1.0.4-1), libarchive-zip-perl (= 1.68-1), libarchive13 (= 3.4.3-2), libasan6 (= 10.2.0-18), libatomic1 (= 10.2.0-18), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3.1), libaudit1 (= 1:2.8.5-3.1), libbinutils (= 2.35.1-3), libblkid1 (= 2.36.1-1), libbrotli1 (= 1.0.9-2+b1), libbz2-1.0 (= 1.0.8-4), libc-bin (= 2.31-4), libc-dev-bin (= 2.31-4), libc6 (= 2.31-4), libc6-dev (= 2.31-4), libcap-ng0 (= 0.7.9-2.2+b1), libcc1-0 (= 10.2.0-18), libcom-err2 (= 1.45.6-1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.17-1), libcrypt1 (= 1:4.4.17-1), libctf-nobfd0 (= 2.35.1-3), libctf0 (= 2.35.1-3), libcurl3-gnutls (= 7.72.0-1), libcurl4 (= 7.72.0-1), libcurl4-gnutls-dev (= 7.72.0-1), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.255), libdebhelper-perl (= 13.2.1), libdpkg-perl (= 1.20.5), libelf1 (= 0.182-1), libexpat1 (= 2.2.10-1), libffi7 (= 3.3-5), libfile-stripnondeterminism-perl (= 1.9.0-1), libgcc-10-dev (= 10.2.0-18), libgcc-s1 (= 10.2.0-18), libgcrypt20 (= 1.8.7-2), libgdbm-compat4 (= 1.18.1-5.1), libgdbm6 (= 1.18.1-5.1), libgfortran5 (= 10.2.0-18), libglib2.0-0 (= 2.66.3-1), libgmp10 (= 2:6.2.1+dfsg-1), libgnutls30 (= 3.6.15-4), libgomp1 (= 10.2.0-18), libgpg-error0 (= 1.38-2), libgssapi-krb5-2 (= 1.18.3-1), libhdf5-103-1 (= 1.10.6+repack-2), libhdf5-cpp-103-1 (= 1.10.6+repack-2), libhdf5-dev (= 1.10.6+repack-2), libhdf5-fortran-102 (= 1.10.6+repack-2), libhdf5-hl-100 (= 1.10.6+repack-2), libhdf5-hl-cpp-100 (= 1.10.6+repack-2), libhdf5-hl-fortran-100 (= 1.10.6+repack-2), libhogweed6 (= 3.6-2), libicu67 (= 67.1-4), libidn2-0 (= 2.3.0-4), libisl22 (= 0.22.1-1), libitm1 (= 10.2.0-18), libjpeg62-turbo (= 1:2.0.5-1.1), libjpeg62-turbo-dev (= 1:2.0.5-1.1), libjsoncpp1 (= 1.7.4-3.1), libk5crypto3 (= 1.18.3-1), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.18.3-1), libkrb5support0 (= 1.18.3-1), libldap-2.4-2 (= 2.4.56+dfsg-1), liblsan0 (= 10.2.0-18), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.39-3), libmagic1 (= 1:5.39-3), libmount1 (= 2.36.1-1), libmpc3 (= 1.2.0-1), libmpfr6 (= 4.1.0-3), libncurses6 (= 6.2+20201114-1), libncursesw6 (= 6.2+20201114-1), libnetcdf-dev (= 1:4.7.4-1), libnetcdf18 (= 1:4.7.4-1), libnettle8 (= 3.6-2), libnghttp2-14 (= 1.41.0-3), libnifti-dev (= 2.0.0+git186-g84740c2-1), libnifti2 (= 2.0.0+git186-g84740c2-1), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libnss-nis (= 3.1-4), libnss-nisplus (= 1.3-4), libp11-kit0 (= 0.23.21-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-13), libperl5.32 (= 5.32.0-5), libpipeline1 (= 1.5.3-1), libprocps8 (= 2:3.3.16-5), libpsl5 (= 0.21.0-1.1), libquadmath0 (= 10.2.0-18), librhash0 (= 1.4.0-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2), libsasl2-2 (= 2.1.27+dfsg-2), libsasl2-modules-db (= 2.1.27+dfsg-2), libseccomp2 (= 2.5.0-3), libselinux1 (= 3.1-2+b1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.36.1-1), libssh2-1 (= 1.8.0-2.1), libssl1.1 (= 1.1.1h-1), libstdc++-10-dev (= 10.2.0-18), libstdc++6 (= 10.2.0-18), libsub-override-perl (= 0.09-2), libsystemd0 (= 246.6-4), libsz2 (= 1.0.4-1), libtasn1-6 (= 4.16.0-2), libtinfo6 (= 6.2+20201114-1), libtirpc-common (= 1.2.6-3), libtirpc-dev (= 1.2.6-3), libtirpc3 (= 1.2.6-3), libtool (= 2.4.6-14), libtsan0 (= 10.2.0-18), libubsan1 (= 10.2.0-18), libuchardet0 (= 0.0.7-1), libudev1 (= 246.6-4), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36.1-1), libuv1 (= 1.40.0-1), libxml2 (= 2.9.10+dfsg-6.2), libzstd1 (= 1.4.5+dfsg-4), linux-libc-dev (= 5.9.9-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.3-4), man-db (= 2.9.3-2), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2+20201114-1), ncurses-bin (= 6.2+20201114-1), patch (= 2.7.6-6), perl (= 5.32.0-5), perl-base (= 5.32.0-5), perl-modules-5.32 (= 5.32.0-5), po-debconf (= 1.0.21), procps (= 2:3.3.16-5), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-5), tar (= 1.30+dfsg-7), util-linux (= 2.36.1-1), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1605686823" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libminc-dev_2.4.03-3_armel.deb ------------------------------ new Debian package, version 2.0. size 73772 bytes: control archive=2220 bytes. 1208 bytes, 27 lines control 3020 bytes, 46 lines md5sums Package: libminc-dev Source: libminc Version: 2.4.03-3 Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 397 Depends: libminc2-5.2.0 (= 2.4.03-3), libnetcdf-dev, libhdf5-dev Conflicts: libminc0-dev Replaces: libminc0-dev Section: libdevel Priority: optional Homepage: https://github.com/BIC-MNI/libminc Description: MNI medical image format development environment This package contains the library and headers for libminc2 and libminc_io. . The Minc file format is a highly flexible medical image file format. Minc version 1 is built on top of the NetCDF generalized data format. Minc version 2 is built on top of the HDF data format. This library handles both formats. In each case the format is simple, self-describing, extensible, portable and N-dimensional, with programming interfaces for both low-level data access and high-level volume manipulation. On top of the libraries is a suite of generic image-file manipulation tools. The format, libraries and tools are designed for use in a medical-imaging research environment : they are simple and powerful and make no attempt to provide a pretty interface to users. drwxr-xr-x root/root 0 2020-11-18 08:07 ./ drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/ drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/include/ -rw-r--r-- root/root 2494 2018-05-19 18:27 ./usr/include/ParseArgv.h -rw-r--r-- root/root 25408 2018-05-19 18:27 ./usr/include/minc.h -rw-r--r-- root/root 257 2018-05-19 18:27 ./usr/include/minc2.h -rw-r--r-- root/root 55236 2018-05-19 18:27 ./usr/include/minc2_api.h -rw-r--r-- root/root 187 2018-05-19 18:27 ./usr/include/minc2_defs.h -rw-r--r-- root/root 1511 2018-05-19 18:27 ./usr/include/minc2_error.h -rw-r--r-- root/root 7139 2018-05-19 18:27 ./usr/include/minc2_structs.h -rw-r--r-- root/root 13997 2018-05-19 18:27 ./usr/include/minc_1_rw.h -rw-r--r-- root/root 7736 2018-05-19 18:27 ./usr/include/minc_1_simple.h -rw-r--r-- root/root 10048 2018-05-19 18:27 ./usr/include/minc_1_simple_rw.h -rw-r--r-- root/root 15111 2018-05-19 18:27 ./usr/include/minc_common_defs.h -rw-r--r-- root/root 2978 2018-05-19 18:27 ./usr/include/minc_compat.h -rw-r--r-- root/root 495 2018-05-19 18:27 ./usr/include/minc_config.h -rw-r--r-- root/root 6095 2018-05-19 18:27 ./usr/include/minc_error.h -rw-r--r-- root/root 988 2018-05-19 18:27 ./usr/include/minc_format_convert.h -rw-r--r-- root/root 3814 2018-05-19 18:27 ./usr/include/minc_io_4d_volume.h -rw-r--r-- root/root 1758 2018-05-19 18:27 ./usr/include/minc_io_exceptions.h -rw-r--r-- root/root 8993 2018-05-19 18:27 ./usr/include/minc_io_fixed_vector.h -rw-r--r-- root/root 16161 2018-05-19 18:27 ./usr/include/minc_io_simple_volume.h -rw-r--r-- root/root 3323 2018-05-19 18:27 ./usr/include/minc_simple.h -rw-r--r-- root/root 2942 2018-05-19 18:27 ./usr/include/nd_loop.h -rw-r--r-- root/root 785 2018-05-19 18:27 ./usr/include/read_file_names.h -rw-r--r-- root/root 531 2018-05-19 18:27 ./usr/include/restructure.h -rw-r--r-- root/root 2122 2018-05-19 18:27 ./usr/include/time_stamp.h -rw-r--r-- root/root 2062 2018-05-19 18:27 ./usr/include/volume_io.h drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/include/volume_io/ -rw-r--r-- root/root 10972 2018-05-19 18:27 ./usr/include/volume_io/alloc.h -rw-r--r-- root/root 6763 2018-05-19 18:27 ./usr/include/volume_io/arrays.h -rw-r--r-- root/root 5006 2018-05-19 18:27 ./usr/include/volume_io/basic.h -rw-r--r-- root/root 1007 2018-05-19 18:27 ./usr/include/volume_io/def_math.h -rw-r--r-- root/root 1617 2018-05-19 18:27 ./usr/include/volume_io/files.h -rw-r--r-- root/root 8342 2018-05-19 18:27 ./usr/include/volume_io/geom_structs.h -rw-r--r-- root/root 8978 2018-05-19 18:27 ./usr/include/volume_io/geometry.h -rw-r--r-- root/root 11723 2018-05-19 18:27 ./usr/include/volume_io/multidim.h -rw-r--r-- root/root 1945 2018-05-19 18:27 ./usr/include/volume_io/progress.h -rw-r--r-- root/root 1761 2018-05-19 18:27 ./usr/include/volume_io/string_funcs.h -rw-r--r-- root/root 1614 2018-05-19 18:27 ./usr/include/volume_io/system_dependent.h -rw-r--r-- root/root 3299 2018-05-19 18:27 ./usr/include/volume_io/transforms.h -rw-r--r-- root/root 56832 2018-05-19 18:27 ./usr/include/volume_io/vol_io_prototypes.h -rw-r--r-- root/root 19145 2018-05-19 18:27 ./usr/include/volume_io/volume.h -rw-r--r-- root/root 3870 2018-05-19 18:27 ./usr/include/volume_io/volume_cache.h -rw-r--r-- root/root 15151 2018-05-19 18:27 ./usr/include/voxel_loop.h drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/lib/ drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/lib/arm-linux-gnueabi/ drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/lib/arm-linux-gnueabi/cmake/ drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/lib/arm-linux-gnueabi/cmake/LIBMINC/ -rw-r--r-- root/root 2118 2020-11-18 08:07 ./usr/lib/arm-linux-gnueabi/cmake/LIBMINC/LIBMINCConfig.cmake -rw-r--r-- root/root 343 2020-11-18 08:07 ./usr/lib/arm-linux-gnueabi/cmake/LIBMINC/UseLIBMINC.cmake lrwxrwxrwx root/root 0 2020-11-18 08:07 ./usr/lib/arm-linux-gnueabi/libminc2.so -> libminc2.so.5.2.0 lrwxrwxrwx root/root 0 2020-11-18 08:07 ./usr/lib/arm-linux-gnueabi/libminc_io.so -> libminc_io.so.5.2.0 drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/share/ drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/share/doc/libminc-dev/ -rw-r--r-- root/root 5155 2020-11-18 08:07 ./usr/share/doc/libminc-dev/changelog.Debian.gz -rw-r--r-- root/root 13424 2018-05-19 18:27 ./usr/share/doc/libminc-dev/changelog.gz -rw-r--r-- root/root 1085 2020-11-18 08:07 ./usr/share/doc/libminc-dev/copyright libminc2-5.2.0-dbgsym_2.4.03-3_armel.deb ---------------------------------------- new Debian package, version 2.0. size 683612 bytes: control archive=664 bytes. 451 bytes, 13 lines control 304 bytes, 3 lines md5sums Package: libminc2-5.2.0-dbgsym Source: libminc Version: 2.4.03-3 Auto-Built-Package: debug-symbols Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 744 Depends: libminc2-5.2.0 (= 2.4.03-3) Section: debug Priority: optional Multi-Arch: same Description: debug symbols for libminc2-5.2.0 Build-Ids: 048da9c0b5644129b7785f0e63405c3701cf5c5f 9e6041629abe0a4a74fad401f8a85e082be1dcde drwxr-xr-x root/root 0 2020-11-18 08:07 ./ drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/ drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/lib/ drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/lib/debug/.build-id/04/ -rw-r--r-- root/root 543660 2020-11-18 08:07 ./usr/lib/debug/.build-id/04/8da9c0b5644129b7785f0e63405c3701cf5c5f.debug drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/lib/debug/.build-id/9e/ -rw-r--r-- root/root 201136 2020-11-18 08:07 ./usr/lib/debug/.build-id/9e/6041629abe0a4a74fad401f8a85e082be1dcde.debug drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/lib/debug/.dwz/arm-linux-gnueabi/ -rw-r--r-- root/root 2376 2020-11-18 08:07 ./usr/lib/debug/.dwz/arm-linux-gnueabi/libminc2-5.2.0.debug drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/share/ drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-11-18 08:07 ./usr/share/doc/libminc2-5.2.0-dbgsym -> libminc2-5.2.0 libminc2-5.2.0_2.4.03-3_armel.deb --------------------------------- new Debian package, version 2.0. size 205456 bytes: control archive=1208 bytes. 1186 bytes, 25 lines control 390 bytes, 5 lines md5sums 86 bytes, 2 lines shlibs 67 bytes, 2 lines triggers Package: libminc2-5.2.0 Source: libminc Version: 2.4.03-3 Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 537 Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.5), libhdf5-103-1, libnetcdf18 (>= 3.6.1), libstdc++6 (>= 5.2) Section: libs Priority: optional Multi-Arch: same Homepage: https://github.com/BIC-MNI/libminc Description: MNI medical image format library This package contains the libraries libminc2 and libminc_io. . The Minc file format is a highly flexible medical image file format. Minc version 1 is built on top of the NetCDF generalized data format. Minc version 2 is built on top of the HDF data format. This library handles both formats. In each case the format is simple, self-describing, extensible, portable and N-dimensional, with programming interfaces for both low-level data access and high-level volume manipulation. On top of the libraries is a suite of generic image-file manipulation tools. The format, libraries and tools are designed for use in a medical-imaging research environment : they are simple and powerful and make no attempt to provide a pretty interface to users. drwxr-xr-x root/root 0 2020-11-18 08:07 ./ drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/ drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/lib/ drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/lib/arm-linux-gnueabi/ -rw-r--r-- root/root 457044 2020-11-18 08:07 ./usr/lib/arm-linux-gnueabi/libminc2.so.5.2.0 -rw-r--r-- root/root 58780 2020-11-18 08:07 ./usr/lib/arm-linux-gnueabi/libminc_io.so.5.2.0 drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/share/ drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-11-18 08:07 ./usr/share/doc/libminc2-5.2.0/ -rw-r--r-- root/root 5155 2020-11-18 08:07 ./usr/share/doc/libminc2-5.2.0/changelog.Debian.gz -rw-r--r-- root/root 13424 2018-05-19 18:27 ./usr/share/doc/libminc2-5.2.0/changelog.gz -rw-r--r-- root/root 1085 2020-11-18 08:07 ./usr/share/doc/libminc2-5.2.0/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [566 B] Get:5 copy:/<>/apt_archive ./ Packages [651 B] Fetched 2180 B in 0s (89.0 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common sbuild-build-depends-lintian-dummy:armel t1utils unzip 0 upgraded, 89 newly installed, 0 to remove and 0 not upgraded. Need to get 7544 kB of archives. After this operation, 22.0 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.1~rc2-2 [73.7 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.1~rc2-2 [168 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.63-1 [35.6 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.3-7.1 [50.5 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.20-1 [532 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.33.0-1 [790 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.20-1 [894 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libaliased-perl all 0.34-1 [13.8 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b4 [71.9 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b3 [11.3 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1 [12.6 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b2 [15.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b3 [25.7 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1 [12.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b3 [45.7 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.24-1 [18.6 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b6 [38.1 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1+b1 [15.4 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-tiny-perl all 2.24-1 [16.2 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.25-1+b1 [129 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libexception-class-perl all 1.44-1 [32.3 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-perl all 0.03+ds1-1 [18.9 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-1 [14.2 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002002-1 [37.8 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b6 [63.3 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-util-perl amd64 1.102-1+b1 [25.6 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-install-perl all 0.928-1 [11.4 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-optlist-perl all 0.110-1 [10.6 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-perl all 0.987-1 [47.2 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-messagepack-perl amd64 1.00-4+b1 [38.8 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-domain-perl all 0.10-1 [12.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b2 [26.1 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-address-xs-perl amd64 1.04-1+b3 [28.0 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1 [7642 B] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.11-1 [8888 B] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1 [317 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-html5-entities-perl all 0.004-1 [21.8 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004003-1 [13.1 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-utilsby-perl all 0.11-1 [15.4 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libmarkdown2 amd64 2.2.6-1 [36.8 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.004000-1 [59.4 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1 [10.2 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libmouse-perl amd64 2.5.10-1+b1 [172 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b3 [12.0 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1+b1 [13.8 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.114-1 [53.6 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-gzip-perl amd64 0.19-1+b7 [17.4 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libproc-processtable-perl amd64 0.59-2+b1 [45.9 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.018+ds-1+b1 [99.3 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.018+ds-1+b1 [103 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-4+b8 [8724 B] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.12-1+b1 [13.0 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.8-1+b1 [197 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b3 [75.8 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-1 [39.2 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.012000-1 [348 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b2 [20.3 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 5.05-1 [90.3 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.82+repack-1+b1 [35.8 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.21-8 [84.3 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-25 [172 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.102.0 [1271 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7544 kB in 0s (31.1 MB/s) Selecting previously unselected package readline-common. (Reading database ... 24535 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.1~rc2-2_all.deb ... Unpacking readline-common (8.1~rc2-2) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.1~rc2-2_amd64.deb ... Unpacking libreadline8:amd64 (8.1~rc2-2) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.3-7.1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7.1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../04-gpgconf_2.2.20-1_amd64.deb ... Unpacking gpgconf (2.2.20-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../05-libsqlite3-0_3.33.0-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.33.0-1) ... Selecting previously unselected package gpg. Preparing to unpack .../06-gpg_2.2.20-1_amd64.deb ... Unpacking gpg (2.2.20-1) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../07-libaliased-perl_0.34-1_all.deb ... Unpacking libaliased-perl (0.34-1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../08-libapt-pkg-perl_0.1.36+b4_amd64.deb ... Unpacking libapt-pkg-perl (0.1.36+b4) ... Selecting previously unselected package libb-hooks-op-check-perl. Preparing to unpack .../09-libb-hooks-op-check-perl_0.22-1+b3_amd64.deb ... Unpacking libb-hooks-op-check-perl (0.22-1+b3) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../10-libdynaloader-functions-perl_0.003-1_all.deb ... Unpacking libdynaloader-functions-perl (0.003-1) ... Selecting previously unselected package libdevel-callchecker-perl. Preparing to unpack .../11-libdevel-callchecker-perl_0.008-1+b2_amd64.deb ... Unpacking libdevel-callchecker-perl (0.008-1+b2) ... Selecting previously unselected package libparams-classify-perl. Preparing to unpack .../12-libparams-classify-perl_0.015-1+b3_amd64.deb ... Unpacking libparams-classify-perl (0.015-1+b3) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../13-libmodule-runtime-perl_0.016-1_all.deb ... Unpacking libmodule-runtime-perl (0.016-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../14-libtry-tiny-perl_0.30-1_all.deb ... Unpacking libtry-tiny-perl (0.30-1) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../15-libmodule-implementation-perl_0.09-1_all.deb ... Unpacking libmodule-implementation-perl (0.09-1) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../16-libsub-exporter-progressive-perl_0.001013-1_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-1) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../17-libvariable-magic-perl_0.62-1+b3_amd64.deb ... Unpacking libvariable-magic-perl (0.62-1+b3) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../18-libb-hooks-endofscope-perl_0.24-1_all.deb ... Unpacking libb-hooks-endofscope-perl (0.24-1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../19-libcapture-tiny-perl_0.48-1_all.deb ... Unpacking libcapture-tiny-perl (0.48-1) ... Selecting previously unselected package libclass-data-inheritable-perl. Preparing to unpack .../20-libclass-data-inheritable-perl_0.08-3_all.deb ... Unpacking libclass-data-inheritable-perl (0.08-3) ... Selecting previously unselected package libclass-method-modifiers-perl. Preparing to unpack .../21-libclass-method-modifiers-perl_2.13-1_all.deb ... Unpacking libclass-method-modifiers-perl (2.13-1) ... Selecting previously unselected package libclass-xsaccessor-perl. Preparing to unpack .../22-libclass-xsaccessor-perl_1.19-3+b6_amd64.deb ... Unpacking libclass-xsaccessor-perl (1.19-3+b6) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../23-libclone-perl_0.45-1+b1_amd64.deb ... Unpacking libclone-perl (0.45-1+b1) ... Selecting previously unselected package libconfig-tiny-perl. Preparing to unpack .../24-libconfig-tiny-perl_2.24-1_all.deb ... Unpacking libconfig-tiny-perl (2.24-1) ... Selecting previously unselected package libcpanel-json-xs-perl. Preparing to unpack .../25-libcpanel-json-xs-perl_4.25-1+b1_amd64.deb ... Unpacking libcpanel-json-xs-perl (4.25-1+b1) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../26-libdevel-stacktrace-perl_2.0400-1_all.deb ... Unpacking libdevel-stacktrace-perl (2.0400-1) ... 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Setting up liburi-perl (5.05-1) ... Setting up libemail-address-xs-perl (1.04-1+b3) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b6) ... Setting up libreadline8:amd64 (8.1~rc2-2) ... Setting up libtype-tiny-perl (1.012000-1) ... Setting up libtext-markdown-discount-perl:amd64 (0.12-1+b1) ... Setting up libexception-class-perl (1.44-1) ... Setting up libdevel-callchecker-perl (0.008-1+b2) ... Setting up libdata-optlist-perl (0.110-1) ... Setting up gpgconf (2.2.20-1) ... Setting up gpg (2.2.20-1) ... Setting up libsub-exporter-perl (0.987-1) ... Setting up libiterator-perl (0.03+ds1-1) ... Setting up libiterator-util-perl (0.02+ds1-1) ... Setting up libparams-classify-perl (0.015-1+b3) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.004000-1) ... Setting up libmoox-aliases-perl (0.001006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.102.0) ... Setting up sbuild-build-depends-lintian-dummy:armel (0.invalid.0) ... Processing triggers for man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.31-4) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 37904 Build-Time: 92 Distribution: unstable Foreign Architectures: armel Host Architecture: armel Install-Time: 31 Job: libminc_2.4.03-3 Lintian: pass Machine Architecture: amd64 Package: libminc Package-Time: 157 Source-Version: 2.4.03-3 Space: 37904 Status: successful Version: 2.4.03-3 -------------------------------------------------------------------------------- Finished at 2020-11-20T22:47:16Z Build needed 00:02:37, 37904k disk space