sbuild (Debian sbuild) 0.78.1 (09 February 2019) on mjolnir +==============================================================================+ | libminc 2.4.03-5 (i386) Sun, 13 Feb 2022 15:47:10 +0000 | +==============================================================================+ Package: libminc Version: 2.4.03-5 Source Version: 2.4.03-5 Distribution: unstable Machine Architecture: arm64 Host Architecture: i386 Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/crossqa-sid-2e40b8d0-91c7-44b1-acdb-3e93d5d73c11' with '<>' I: NOTICE: Log filtering will replace 'build/libminc-9Z019g/resolver-CZGXUF' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://mirror.einval.org/debian sid InRelease [165 kB] Ign:2 http://mirror.einval.org/debian sid/main Sources.diff/Index Ign:3 http://mirror.einval.org/debian sid/main arm64 Packages.diff/Index Get:2 http://mirror.einval.org/debian sid/main Sources.diff/Index [63.6 kB] Ign:2 http://mirror.einval.org/debian sid/main Sources.diff/Index Ign:3 http://mirror.einval.org/debian sid/main arm64 Packages.diff/Index Get:4 http://mirror.einval.org/debian sid/main i386 Packages [8840 kB] Get:5 http://mirror.einval.org/debian sid/main Sources [9522 kB] Get:6 http://mirror.einval.org/debian sid/main arm64 Packages [8788 kB] Fetched 27.3 MB in 7s (3798 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'libminc' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libminc.git Please use: git clone https://salsa.debian.org/med-team/libminc.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 820 kB of source archives. Get:1 http://mirror.einval.org/debian sid/main libminc 2.4.03-5 (dsc) [2105 B] Get:2 http://mirror.einval.org/debian sid/main libminc 2.4.03-5 (tar) [809 kB] Get:3 http://mirror.einval.org/debian sid/main libminc 2.4.03-5 (diff) [9108 B] Fetched 820 kB in 0s (10.5 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/libminc-9Z019g/libminc-2.4.03' with '<>' I: NOTICE: Log filtering will replace 'build/libminc-9Z019g' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-exec, cmake, libnetcdf-dev, libnifti-dev, zlib1g-dev, libhdf5-dev, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-i386:arm64, libc-dev:i386, libstdc++-dev:i386 Filtered Build-Depends: debhelper-compat (= 13), dh-exec, cmake, libnetcdf-dev, libnifti-dev, zlib1g-dev, libhdf5-dev, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-i386:arm64, libc-dev:i386, libstdc++-dev:i386 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [433 B] Get:5 copy:/<>/apt_archive ./ Packages [525 B] Fetched 1915 B in 0s (45.0 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-i686-linux-gnu bsdextrautils cmake cmake-data cpp-11-i686-linux-gnu cpp-i686-linux-gnu cross-config crossbuild-essential-i386 debhelper dh-autoreconf dh-elpa-helper dh-exec dh-strip-nondeterminism dpkg-cross dwz emacsen-common file g++-11-i686-linux-gnu g++-i686-linux-gnu gcc-11-base:i386 gcc-11-cross-base gcc-11-i686-linux-gnu gcc-11-i686-linux-gnu-base gcc-i686-linux-gnu gettext gettext-base groff-base hdf5-helpers:i386 intltool-debian libaec-dev:i386 libaec0:i386 libarchive-zip-perl libarchive13 libasan6:i386 libasan6-i386-cross libatomic1:i386 libatomic1-i386-cross libbrotli1 libbrotli1:i386 libc6:i386 libc6-dev:i386 libc6-dev-i386-cross libc6-i386-cross libcom-err2:i386 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:i386 libcrypt1:i386 libcurl3-gnutls:i386 libcurl4 libcurl4:i386 libcurl4-openssl-dev:i386 libdb5.3:i386 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libexpat1 libffi8:i386 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:i386 libgcc-11-dev-i386-cross libgcc-s1:i386 libgcc-s1-i386-cross libgfortran5:i386 libgmp10:i386 libgnutls30:i386 libgomp1:i386 libgomp1-i386-cross libgssapi-krb5-2:i386 libhdf5-103-1:i386 libhdf5-cpp-103-1:i386 libhdf5-dev:i386 libhdf5-fortran-102:i386 libhdf5-hl-100:i386 libhdf5-hl-cpp-100:i386 libhdf5-hl-fortran-100:i386 libhogweed6:i386 libicu67 libidn2-0:i386 libio-string-perl libitm1:i386 libitm1-i386-cross libjpeg-dev:i386 libjpeg62-turbo:i386 libjpeg62-turbo-dev:i386 libjsoncpp25 libk5crypto3:i386 libkeyutils1:i386 libkrb5-3:i386 libkrb5support0:i386 libldap-2.4-2 libldap-2.4-2:i386 liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libncursesw6 libnetcdf-dev:i386 libnetcdf19:i386 libnettle8:i386 libnghttp2-14 libnghttp2-14:i386 libnifti2-2:i386 libnifti2-dev:i386 libnifticdf-dev:i386 libnifticdf2:i386 libniftiio-dev:i386 libniftiio2:i386 libnsl-dev:i386 libnsl2:i386 libp11-kit0:i386 libpipeline1 libprocps8 libpsl5 libpsl5:i386 libquadmath0:i386 libquadmath0-i386-cross librhash0 librtmp1 librtmp1:i386 libsasl2-2 libsasl2-2:i386 libsasl2-modules-db libsasl2-modules-db:i386 libsigsegv2 libssh2-1 libssh2-1:i386 libssl-dev:i386 libssl1.1:i386 libstdc++-11-dev:i386 libstdc++-11-dev-i386-cross libstdc++6:i386 libstdc++6-i386-cross libsub-override-perl libsz2:i386 libtasn1-6:i386 libtirpc-dev:i386 libtirpc3:i386 libtool libubsan1:i386 libubsan1-i386-cross libuchardet0 libunistring2:i386 libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libznz-dev:i386 libznz3:i386 libzstd1:i386 linux-libc-dev:i386 linux-libc-dev-i386-cross m4 man-db po-debconf procps sensible-utils ucf zlib1g:i386 zlib1g-dev:i386 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc cmake-doc ninja-build cmake-format gcc-11-locales cpp-doc dh-make binutils-multiarch g++-11-multilib-i686-linux-gnu gcc-11-doc gcc-11-multilib-i686-linux-gnu manpages-dev flex bison gdb-i686-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff lrzip glibc-doc:i386 libc-l10n:i386 locales:i386 libnss-nis:i386 libnss-nisplus:i386 manpages-dev:i386 libcurl4-doc:i386 libidn11-dev:i386 libkrb5-dev:i386 libldap2-dev:i386 librtmp-dev:i386 libssh2-1-dev:i386 pkg-config:i386 gnutls-bin:i386 krb5-doc:i386 krb5-user:i386 libhdf5-doc:i386 netcdf-bin:i386 netcdf-doc:i386 libssl-doc:i386 libstdc++-11-doc:i386 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx ca-certificates:i386 ca-certificates libarchive-cpio-perl krb5-locales:i386 libldap-common libldap-common:i386 libgpm2 pkg-config:i386 publicsuffix publicsuffix:i386 libsasl2-modules libsasl2-modules:i386 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-i686-linux-gnu bsdextrautils cmake cmake-data cpp-11-i686-linux-gnu cpp-i686-linux-gnu cross-config crossbuild-essential-i386 debhelper dh-autoreconf dh-elpa-helper dh-exec dh-strip-nondeterminism dpkg-cross dwz emacsen-common file g++-11-i686-linux-gnu g++-i686-linux-gnu gcc-11-base:i386 gcc-11-cross-base gcc-11-i686-linux-gnu gcc-11-i686-linux-gnu-base gcc-i686-linux-gnu gettext gettext-base groff-base hdf5-helpers:i386 intltool-debian libaec-dev:i386 libaec0:i386 libarchive-zip-perl libarchive13 libasan6:i386 libasan6-i386-cross libatomic1:i386 libatomic1-i386-cross libbrotli1 libbrotli1:i386 libc6:i386 libc6-dev:i386 libc6-dev-i386-cross libc6-i386-cross libcom-err2:i386 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:i386 libcrypt1:i386 libcurl3-gnutls:i386 libcurl4 libcurl4:i386 libcurl4-openssl-dev:i386 libdb5.3:i386 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libexpat1 libffi8:i386 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:i386 libgcc-11-dev-i386-cross libgcc-s1:i386 libgcc-s1-i386-cross libgfortran5:i386 libgmp10:i386 libgnutls30:i386 libgomp1:i386 libgomp1-i386-cross libgssapi-krb5-2:i386 libhdf5-103-1:i386 libhdf5-cpp-103-1:i386 libhdf5-dev:i386 libhdf5-fortran-102:i386 libhdf5-hl-100:i386 libhdf5-hl-cpp-100:i386 libhdf5-hl-fortran-100:i386 libhogweed6:i386 libicu67 libidn2-0:i386 libio-string-perl libitm1:i386 libitm1-i386-cross libjpeg-dev:i386 libjpeg62-turbo:i386 libjpeg62-turbo-dev:i386 libjsoncpp25 libk5crypto3:i386 libkeyutils1:i386 libkrb5-3:i386 libkrb5support0:i386 libldap-2.4-2 libldap-2.4-2:i386 liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libncursesw6 libnetcdf-dev:i386 libnetcdf19:i386 libnettle8:i386 libnghttp2-14 libnghttp2-14:i386 libnifti2-2:i386 libnifti2-dev:i386 libnifticdf-dev:i386 libnifticdf2:i386 libniftiio-dev:i386 libniftiio2:i386 libnsl-dev:i386 libnsl2:i386 libp11-kit0:i386 libpipeline1 libprocps8 libpsl5 libpsl5:i386 libquadmath0:i386 libquadmath0-i386-cross librhash0 librtmp1 librtmp1:i386 libsasl2-2 libsasl2-2:i386 libsasl2-modules-db libsasl2-modules-db:i386 libsigsegv2 libssh2-1 libssh2-1:i386 libssl-dev:i386 libssl1.1:i386 libstdc++-11-dev:i386 libstdc++-11-dev-i386-cross libstdc++6:i386 libstdc++6-i386-cross libsub-override-perl libsz2:i386 libtasn1-6:i386 libtirpc-dev:i386 libtirpc3:i386 libtool libubsan1:i386 libubsan1-i386-cross libuchardet0 libunistring2:i386 libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libznz-dev:i386 libznz3:i386 libzstd1:i386 linux-libc-dev:i386 linux-libc-dev-i386-cross m4 man-db po-debconf procps sbuild-build-depends-main-dummy:i386 sensible-utils ucf zlib1g:i386 zlib1g-dev:i386 0 upgraded, 171 newly installed, 0 to remove and 0 not upgraded. Need to get 111 MB of archives. After this operation, 421 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [948 B] Get:2 http://mirror.einval.org/debian sid/main arm64 liblocale-gettext-perl arm64 1.07-4+b2 [18.9 kB] Get:3 http://mirror.einval.org/debian sid/main arm64 libncurses6 arm64 6.3-2 [92.9 kB] Get:4 http://mirror.einval.org/debian sid/main arm64 libncursesw6 arm64 6.3-2 [120 kB] Get:5 http://mirror.einval.org/debian sid/main arm64 libprocps8 arm64 2:3.3.17-6 [62.1 kB] Get:6 http://mirror.einval.org/debian sid/main arm64 procps arm64 2:3.3.17-6 [500 kB] Get:7 http://mirror.einval.org/debian sid/main arm64 sensible-utils all 0.0.17 [21.5 kB] Get:8 http://mirror.einval.org/debian sid/main arm64 libmagic-mgc arm64 1:5.41-2 [295 kB] Get:9 http://mirror.einval.org/debian sid/main arm64 libmagic1 arm64 1:5.41-2 [124 kB] Get:10 http://mirror.einval.org/debian sid/main arm64 file arm64 1:5.41-2 [66.8 kB] Get:11 http://mirror.einval.org/debian sid/main arm64 gettext-base arm64 0.21-4 [173 kB] Get:12 http://mirror.einval.org/debian sid/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get:13 http://mirror.einval.org/debian sid/main arm64 groff-base arm64 1.22.4-8 [882 kB] Get:14 http://mirror.einval.org/debian sid/main arm64 bsdextrautils arm64 2.37.3-1+b1 [145 kB] Get:15 http://mirror.einval.org/debian sid/main arm64 libpipeline1 arm64 1.5.5-1 [35.8 kB] Get:16 http://mirror.einval.org/debian sid/main arm64 man-db arm64 2.10.1-1 [1387 kB] Get:17 http://mirror.einval.org/debian sid/main arm64 ucf all 3.0043 [74.0 kB] Get:18 http://mirror.einval.org/debian sid/main arm64 libsigsegv2 arm64 2.14-1 [37.0 kB] Get:19 http://mirror.einval.org/debian sid/main arm64 m4 arm64 1.4.18-5 [199 kB] Get:20 http://mirror.einval.org/debian sid/main arm64 autoconf all 2.71-2 [343 kB] Get:21 http://mirror.einval.org/debian sid/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get:22 http://mirror.einval.org/debian sid/main arm64 automake all 1:1.16.5-1.1 [823 kB] Get:23 http://mirror.einval.org/debian sid/main arm64 autopoint all 0.21-4 [510 kB] Get:24 http://mirror.einval.org/debian sid/main arm64 libicu67 arm64 67.1-7 [8467 kB] Get:25 http://mirror.einval.org/debian sid/main arm64 libxml2 arm64 2.9.12+dfsg-5+b1 [633 kB] Get:26 http://mirror.einval.org/debian sid/main arm64 libarchive13 arm64 3.5.2-1 [322 kB] Get:27 http://mirror.einval.org/debian sid/main arm64 libbrotli1 arm64 1.0.9-2+b3 [270 kB] Get:28 http://mirror.einval.org/debian sid/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg2-3 [74.4 kB] Get:29 http://mirror.einval.org/debian sid/main arm64 libsasl2-2 arm64 2.1.27+dfsg2-3 [110 kB] Get:30 http://mirror.einval.org/debian sid/main arm64 libldap-2.4-2 arm64 2.4.59+dfsg-1+b1 [223 kB] Get:31 http://mirror.einval.org/debian sid/main arm64 libnghttp2-14 arm64 1.43.0-1 [73.8 kB] Get:32 http://mirror.einval.org/debian sid/main arm64 libpsl5 arm64 0.21.0-1.2 [57.1 kB] Get:33 http://mirror.einval.org/debian sid/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b2 [59.4 kB] Get:34 http://mirror.einval.org/debian sid/main arm64 libssh2-1 arm64 1.10.0-2 [172 kB] Get:35 http://mirror.einval.org/debian sid/main arm64 libcurl4 arm64 7.81.0-1 [336 kB] Get:36 http://mirror.einval.org/debian sid/main arm64 libexpat1 arm64 2.4.4-1 [92.5 kB] Get:37 http://mirror.einval.org/debian sid/main arm64 libjsoncpp25 arm64 1.9.5-3 [72.5 kB] Get:38 http://mirror.einval.org/debian sid/main arm64 librhash0 arm64 1.4.2-1 [127 kB] Get:39 http://mirror.einval.org/debian sid/main arm64 libuv1 arm64 1.43.0-1 [131 kB] Get:40 http://mirror.einval.org/debian sid/main arm64 dh-elpa-helper all 2.0.10 [11.3 kB] Get:41 http://mirror.einval.org/debian sid/main arm64 emacsen-common all 3.0.4 [19.3 kB] Get:42 http://mirror.einval.org/debian sid/main arm64 cmake-data all 3.22.1-1 [1905 kB] Get:43 http://mirror.einval.org/debian sid/main arm64 cmake arm64 3.22.1-1+b1 [5437 kB] Get:44 http://mirror.einval.org/debian sid/main arm64 gcc-11-i686-linux-gnu-base arm64 11.2.0-16cross1 [207 kB] Get:45 http://mirror.einval.org/debian sid/main arm64 cpp-11-i686-linux-gnu arm64 11.2.0-16cross1 [7860 kB] Get:46 http://mirror.einval.org/debian sid/main arm64 cpp-i686-linux-gnu arm64 4:11.2.0-2 [17.0 kB] Get:47 http://mirror.einval.org/debian sid/main arm64 cross-config all 2.6.18+nmu2 [31.7 kB] Get:48 http://mirror.einval.org/debian sid/main arm64 binutils-i686-linux-gnu arm64 2.38-1 [2324 kB] Get:49 http://mirror.einval.org/debian sid/main arm64 gcc-11-cross-base all 11.2.0-16cross1 [203 kB] Get:50 http://mirror.einval.org/debian sid/main arm64 libc6-i386-cross all 2.33-1cross1 [1526 kB] Get:51 http://mirror.einval.org/debian sid/main arm64 libgcc-s1-i386-cross all 11.2.0-16cross1 [49.9 kB] Get:52 http://mirror.einval.org/debian sid/main arm64 libgomp1-i386-cross all 11.2.0-16cross1 [108 kB] Get:53 http://mirror.einval.org/debian sid/main arm64 libitm1-i386-cross all 11.2.0-16cross1 [27.3 kB] Get:54 http://mirror.einval.org/debian sid/main arm64 libatomic1-i386-cross all 11.2.0-16cross1 [7552 B] Get:55 http://mirror.einval.org/debian sid/main arm64 libasan6-i386-cross all 11.2.0-16cross1 [1926 kB] Get:56 http://mirror.einval.org/debian sid/main arm64 libstdc++6-i386-cross all 11.2.0-16cross1 [575 kB] Get:57 http://mirror.einval.org/debian sid/main arm64 libubsan1-i386-cross all 11.2.0-16cross1 [812 kB] Get:58 http://mirror.einval.org/debian sid/main arm64 libquadmath0-i386-cross all 11.2.0-16cross1 [226 kB] Get:59 http://mirror.einval.org/debian sid/main arm64 libgcc-11-dev-i386-cross all 11.2.0-16cross1 [2331 kB] Get:60 http://mirror.einval.org/debian sid/main arm64 gcc-11-i686-linux-gnu arm64 11.2.0-16cross1 [15.6 MB] Get:61 http://mirror.einval.org/debian sid/main arm64 gcc-i686-linux-gnu arm64 4:11.2.0-2 [1452 B] Get:62 http://mirror.einval.org/debian sid/main arm64 linux-libc-dev-i386-cross all 5.15.5-1cross1 [1576 kB] Get:63 http://mirror.einval.org/debian sid/main arm64 libc6-dev-i386-cross all 2.33-1cross1 [2170 kB] Get:64 http://mirror.einval.org/debian sid/main arm64 libstdc++-11-dev-i386-cross all 11.2.0-16cross1 [2012 kB] Get:65 http://mirror.einval.org/debian sid/main arm64 g++-11-i686-linux-gnu arm64 11.2.0-16cross1 [8676 kB] Get:66 http://mirror.einval.org/debian sid/main arm64 g++-i686-linux-gnu arm64 4:11.2.0-2 [1168 B] Get:67 http://mirror.einval.org/debian sid/main arm64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:68 http://mirror.einval.org/debian sid/main arm64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:69 http://mirror.einval.org/debian sid/main arm64 libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get:70 http://mirror.einval.org/debian sid/main arm64 libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get:71 http://mirror.einval.org/debian sid/main arm64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:72 http://mirror.einval.org/debian sid/main arm64 libxml-libxml-perl arm64 2.0207+dfsg+really+2.0134-1 [326 kB] Get:73 http://mirror.einval.org/debian sid/main arm64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:74 http://mirror.einval.org/debian sid/main arm64 libyaml-perl all 1.30-1 [67.7 kB] Get:75 http://mirror.einval.org/debian sid/main arm64 libconfig-auto-perl all 0.44-1.1 [19.0 kB] Get:76 http://mirror.einval.org/debian sid/main arm64 libfile-which-perl all 1.23-1 [16.6 kB] Get:77 http://mirror.einval.org/debian sid/main arm64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:78 http://mirror.einval.org/debian sid/main arm64 libdebian-dpkgcross-perl all 2.6.18+nmu2 [30.6 kB] Get:79 http://mirror.einval.org/debian sid/main arm64 dpkg-cross all 2.6.18+nmu2 [40.9 kB] Get:80 http://mirror.einval.org/debian sid/main arm64 crossbuild-essential-i386 all 12.9 [6704 B] Get:81 http://mirror.einval.org/debian sid/main arm64 libdebhelper-perl all 13.6 [193 kB] Get:82 http://mirror.einval.org/debian sid/main arm64 libtool all 2.4.6-15 [513 kB] Get:83 http://mirror.einval.org/debian sid/main arm64 dh-autoreconf all 20 [17.1 kB] Get:84 http://mirror.einval.org/debian sid/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get:85 http://mirror.einval.org/debian sid/main arm64 libsub-override-perl all 0.09-2 [10.2 kB] Get:86 http://mirror.einval.org/debian sid/main arm64 libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB] Get:87 http://mirror.einval.org/debian sid/main arm64 dh-strip-nondeterminism all 1.13.0-1 [15.8 kB] Get:88 http://mirror.einval.org/debian sid/main arm64 libelf1 arm64 0.186-1 [177 kB] Get:89 http://mirror.einval.org/debian sid/main arm64 dwz arm64 0.14-1 [90.0 kB] Get:90 http://mirror.einval.org/debian sid/main arm64 gettext arm64 0.21-4 [1261 kB] Get:91 http://mirror.einval.org/debian sid/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:92 http://mirror.einval.org/debian sid/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get:93 http://mirror.einval.org/debian sid/main arm64 debhelper all 13.6 [1054 kB] Get:94 http://mirror.einval.org/debian sid/main arm64 dh-exec arm64 0.23.4 [26.5 kB] Get:95 http://mirror.einval.org/debian sid/main i386 gcc-11-base i386 11.2.0-16 [207 kB] Get:96 http://mirror.einval.org/debian sid/main i386 hdf5-helpers i386 1.10.7+repack-4 [42.9 kB] Get:97 http://mirror.einval.org/debian sid/main i386 libgcc-s1 i386 11.2.0-16 [49.9 kB] Get:98 http://mirror.einval.org/debian sid/main i386 libc6 i386 2.33-5 [2788 kB] Get:99 http://mirror.einval.org/debian sid/main i386 libaec0 i386 1.0.6-1 [21.7 kB] Get:100 http://mirror.einval.org/debian sid/main i386 libsz2 i386 1.0.6-1 [7500 B] Get:101 http://mirror.einval.org/debian sid/main i386 libaec-dev i386 1.0.6-1 [20.7 kB] Get:102 http://mirror.einval.org/debian sid/main i386 libasan6 i386 11.2.0-16 [1933 kB] Get:103 http://mirror.einval.org/debian sid/main i386 libatomic1 i386 11.2.0-16 [7760 B] Get:104 http://mirror.einval.org/debian sid/main i386 libbrotli1 i386 1.0.9-2+b3 [273 kB] Get:105 http://mirror.einval.org/debian sid/main i386 linux-libc-dev i386 5.16.7-2 [1495 kB] Get:106 http://mirror.einval.org/debian sid/main i386 libcrypt1 i386 1:4.4.27-1.1 [99.5 kB] Get:107 http://mirror.einval.org/debian sid/main i386 libcrypt-dev i386 1:4.4.27-1.1 [129 kB] Get:108 http://mirror.einval.org/debian sid/main i386 libcom-err2 i386 1.46.5-2 [76.1 kB] Get:109 http://mirror.einval.org/debian sid/main i386 libkrb5support0 i386 1.18.3-7 [68.6 kB] Get:110 http://mirror.einval.org/debian sid/main i386 libk5crypto3 i386 1.18.3-7 [117 kB] Get:111 http://mirror.einval.org/debian sid/main i386 libkeyutils1 i386 1.6.1-2 [15.9 kB] Get:112 http://mirror.einval.org/debian sid/main i386 libssl1.1 i386 1.1.1m-1 [1550 kB] Get:113 http://mirror.einval.org/debian sid/main i386 libkrb5-3 i386 1.18.3-7 [390 kB] Get:114 http://mirror.einval.org/debian sid/main i386 libgssapi-krb5-2 i386 1.18.3-7 [176 kB] Get:115 http://mirror.einval.org/debian sid/main i386 libtirpc3 i386 1.3.2-2 [91.3 kB] Get:116 http://mirror.einval.org/debian sid/main i386 libnsl2 i386 1.3.0-2 [42.2 kB] Get:117 http://mirror.einval.org/debian sid/main i386 libtirpc-dev i386 1.3.2-2 [201 kB] Get:118 http://mirror.einval.org/debian sid/main i386 libnsl-dev i386 1.3.0-2 [70.6 kB] Get:119 http://mirror.einval.org/debian sid/main i386 libc6-dev i386 2.33-5 [2173 kB] Get:120 http://mirror.einval.org/debian sid/main i386 libgmp10 i386 2:6.2.1+dfsg-3 [570 kB] Get:121 http://mirror.einval.org/debian sid/main i386 libnettle8 i386 3.7.3-1 [286 kB] Get:122 http://mirror.einval.org/debian sid/main i386 libhogweed6 i386 3.7.3-1 [323 kB] Get:123 http://mirror.einval.org/debian sid/main i386 libunistring2 i386 1.0-1 [436 kB] Get:124 http://mirror.einval.org/debian sid/main i386 libidn2-0 i386 2.3.2-2 [96.4 kB] Get:125 http://mirror.einval.org/debian sid/main i386 libffi8 i386 3.4.2-4 [22.7 kB] Get:126 http://mirror.einval.org/debian sid/main i386 libp11-kit0 i386 0.24.0-6 [344 kB] Get:127 http://mirror.einval.org/debian sid/main i386 libtasn1-6 i386 4.18.0-4 [58.2 kB] Get:128 http://mirror.einval.org/debian sid/main i386 libgnutls30 i386 3.7.3-4+b1 [1382 kB] Get:129 http://mirror.einval.org/debian sid/main i386 libdb5.3 i386 5.3.28+dfsg1-0.8 [752 kB] Get:130 http://mirror.einval.org/debian sid/main i386 libsasl2-modules-db i386 2.1.27+dfsg2-3 [75.1 kB] Get:131 http://mirror.einval.org/debian sid/main i386 libsasl2-2 i386 2.1.27+dfsg2-3 [114 kB] Get:132 http://mirror.einval.org/debian sid/main i386 libldap-2.4-2 i386 2.4.59+dfsg-1+b1 [245 kB] Get:133 http://mirror.einval.org/debian sid/main i386 libnghttp2-14 i386 1.43.0-1 [85.7 kB] Get:134 http://mirror.einval.org/debian sid/main i386 libpsl5 i386 0.21.0-1.2 [57.9 kB] Get:135 http://mirror.einval.org/debian sid/main i386 zlib1g i386 1:1.2.11.dfsg-2 [93.1 kB] Get:136 http://mirror.einval.org/debian sid/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB] Get:137 http://mirror.einval.org/debian sid/main i386 libssh2-1 i386 1.10.0-2 [187 kB] Get:138 http://mirror.einval.org/debian sid/main i386 libzstd1 i386 1.4.8+dfsg-3 [307 kB] Get:139 http://mirror.einval.org/debian sid/main i386 libcurl3-gnutls i386 7.81.0-1 [383 kB] Get:140 http://mirror.einval.org/debian sid/main i386 libcurl4 i386 7.81.0-1 [389 kB] Get:141 http://mirror.einval.org/debian sid/main i386 libcurl4-openssl-dev i386 7.81.0-1 [494 kB] Get:142 http://mirror.einval.org/debian sid/main i386 libgomp1 i386 11.2.0-16 [111 kB] Get:143 http://mirror.einval.org/debian sid/main i386 libitm1 i386 11.2.0-16 [27.8 kB] Get:144 http://mirror.einval.org/debian sid/main i386 libstdc++6 i386 11.2.0-16 [617 kB] Get:145 http://mirror.einval.org/debian sid/main i386 libubsan1 i386 11.2.0-16 [813 kB] Get:146 http://mirror.einval.org/debian sid/main i386 libquadmath0 i386 11.2.0-16 [226 kB] Get:147 http://mirror.einval.org/debian sid/main i386 libgcc-11-dev i386 11.2.0-16 [2334 kB] Get:148 http://mirror.einval.org/debian sid/main i386 libgfortran5 i386 11.2.0-16 [651 kB] Get:149 http://mirror.einval.org/debian sid/main i386 libhdf5-103-1 i386 1.10.7+repack-4 [1189 kB] Get:150 http://mirror.einval.org/debian sid/main i386 libhdf5-cpp-103-1 i386 1.10.7+repack-4 [152 kB] Get:151 http://mirror.einval.org/debian sid/main i386 libhdf5-fortran-102 i386 1.10.7+repack-4 [117 kB] Get:152 http://mirror.einval.org/debian sid/main i386 libhdf5-hl-100 i386 1.10.7+repack-4 [95.7 kB] Get:153 http://mirror.einval.org/debian sid/main i386 libhdf5-hl-fortran-100 i386 1.10.7+repack-4 [61.1 kB] Get:154 http://mirror.einval.org/debian sid/main i386 libhdf5-hl-cpp-100 i386 1.10.7+repack-4 [40.7 kB] Get:155 http://mirror.einval.org/debian sid/main i386 zlib1g-dev i386 1:1.2.11.dfsg-2 [194 kB] Get:156 http://mirror.einval.org/debian sid/main i386 libjpeg62-turbo i386 1:2.1.2-1 [170 kB] Get:157 http://mirror.einval.org/debian sid/main i386 libjpeg62-turbo-dev i386 1:2.1.2-1 [306 kB] Get:158 http://mirror.einval.org/debian sid/main i386 libjpeg-dev i386 1:2.1.2-1 [74.7 kB] Get:159 http://mirror.einval.org/debian sid/main i386 libssl-dev i386 1.1.1m-1 [1841 kB] Get:160 http://mirror.einval.org/debian sid/main i386 libhdf5-dev i386 1.10.7+repack-4 [2630 kB] Get:161 http://mirror.einval.org/debian sid/main i386 libnetcdf19 i386 1:4.8.1-1 [502 kB] Get:162 http://mirror.einval.org/debian sid/main i386 libnetcdf-dev i386 1:4.8.1-1 [99.6 kB] Get:163 http://mirror.einval.org/debian sid/main i386 libznz3 i386 3.0.1-8 [14.0 kB] Get:164 http://mirror.einval.org/debian sid/main i386 libnifti2-2 i386 3.0.1-8 [79.6 kB] Get:165 http://mirror.einval.org/debian sid/main i386 libnifticdf2 i386 3.0.1-8 [51.8 kB] Get:166 http://mirror.einval.org/debian sid/main i386 libnifticdf-dev i386 3.0.1-8 [63.9 kB] Get:167 http://mirror.einval.org/debian sid/main i386 libniftiio2 i386 3.0.1-8 [62.3 kB] Get:168 http://mirror.einval.org/debian sid/main i386 libniftiio-dev i386 3.0.1-8 [74.0 kB] Get:169 http://mirror.einval.org/debian sid/main i386 libznz-dev i386 3.0.1-8 [14.3 kB] Get:170 http://mirror.einval.org/debian sid/main i386 libnifti2-dev i386 3.0.1-8 [107 kB] Get:171 http://mirror.einval.org/debian sid/main i386 libstdc++-11-dev i386 11.2.0-16 [2028 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 111 MB in 2s (65.4 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 12377 files and directories currently installed.) Preparing to unpack .../000-liblocale-gettext-perl_1.07-4+b2_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b2) ... Selecting previously unselected package libncurses6:arm64. Preparing to unpack .../001-libncurses6_6.3-2_arm64.deb ... Unpacking libncurses6:arm64 (6.3-2) ... Selecting previously unselected package libncursesw6:arm64. Preparing to unpack .../002-libncursesw6_6.3-2_arm64.deb ... Unpacking libncursesw6:arm64 (6.3-2) ... Selecting previously unselected package libprocps8:arm64. Preparing to unpack .../003-libprocps8_2%3a3.3.17-6_arm64.deb ... Unpacking libprocps8:arm64 (2:3.3.17-6) ... Selecting previously unselected package procps. Preparing to unpack .../004-procps_2%3a3.3.17-6_arm64.deb ... Unpacking procps (2:3.3.17-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../005-sensible-utils_0.0.17_all.deb ... Unpacking sensible-utils (0.0.17) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../006-libmagic-mgc_1%3a5.41-2_arm64.deb ... Unpacking libmagic-mgc (1:5.41-2) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../007-libmagic1_1%3a5.41-2_arm64.deb ... Unpacking libmagic1:arm64 (1:5.41-2) ... Selecting previously unselected package file. Preparing to unpack .../008-file_1%3a5.41-2_arm64.deb ... Unpacking file (1:5.41-2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../009-gettext-base_0.21-4_arm64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../010-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../011-groff-base_1.22.4-8_arm64.deb ... Unpacking groff-base (1.22.4-8) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../012-bsdextrautils_2.37.3-1+b1_arm64.deb ... Unpacking bsdextrautils (2.37.3-1+b1) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../013-libpipeline1_1.5.5-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.5-1) ... Selecting previously unselected package man-db. Preparing to unpack .../014-man-db_2.10.1-1_arm64.deb ... Unpacking man-db (2.10.1-1) ... Selecting previously unselected package ucf. Preparing to unpack .../015-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:arm64. Preparing to unpack .../016-libsigsegv2_2.14-1_arm64.deb ... Unpacking libsigsegv2:arm64 (2.14-1) ... Selecting previously unselected package m4. Preparing to unpack .../017-m4_1.4.18-5_arm64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../018-autoconf_2.71-2_all.deb ... Unpacking autoconf (2.71-2) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../019-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../020-automake_1%3a1.16.5-1.1_all.deb ... Unpacking automake (1:1.16.5-1.1) ... Selecting previously unselected package autopoint. Preparing to unpack .../021-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package libicu67:arm64. Preparing to unpack .../022-libicu67_67.1-7_arm64.deb ... Unpacking libicu67:arm64 (67.1-7) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../023-libxml2_2.9.12+dfsg-5+b1_arm64.deb ... Unpacking libxml2:arm64 (2.9.12+dfsg-5+b1) ... Selecting previously unselected package libarchive13:arm64. Preparing to unpack .../024-libarchive13_3.5.2-1_arm64.deb ... Unpacking libarchive13:arm64 (3.5.2-1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../025-libbrotli1_1.0.9-2+b3_arm64.deb ... Unpacking libbrotli1:arm64 (1.0.9-2+b3) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../026-libsasl2-modules-db_2.1.27+dfsg2-3_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.27+dfsg2-3) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../027-libsasl2-2_2.1.27+dfsg2-3_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.27+dfsg2-3) ... Selecting previously unselected package libldap-2.4-2:arm64. Preparing to unpack .../028-libldap-2.4-2_2.4.59+dfsg-1+b1_arm64.deb ... Unpacking libldap-2.4-2:arm64 (2.4.59+dfsg-1+b1) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../029-libnghttp2-14_1.43.0-1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.43.0-1) ... Selecting previously unselected package libpsl5:arm64. Preparing to unpack .../030-libpsl5_0.21.0-1.2_arm64.deb ... Unpacking libpsl5:arm64 (0.21.0-1.2) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../031-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:arm64. Preparing to unpack .../032-libssh2-1_1.10.0-2_arm64.deb ... Unpacking libssh2-1:arm64 (1.10.0-2) ... Selecting previously unselected package libcurl4:arm64. Preparing to unpack .../033-libcurl4_7.81.0-1_arm64.deb ... Unpacking libcurl4:arm64 (7.81.0-1) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../034-libexpat1_2.4.4-1_arm64.deb ... Unpacking libexpat1:arm64 (2.4.4-1) ... Selecting previously unselected package libjsoncpp25:arm64. Preparing to unpack .../035-libjsoncpp25_1.9.5-3_arm64.deb ... Unpacking libjsoncpp25:arm64 (1.9.5-3) ... Selecting previously unselected package librhash0:arm64. Preparing to unpack .../036-librhash0_1.4.2-1_arm64.deb ... Unpacking librhash0:arm64 (1.4.2-1) ... Selecting previously unselected package libuv1:arm64. Preparing to unpack .../037-libuv1_1.43.0-1_arm64.deb ... Unpacking libuv1:arm64 (1.43.0-1) ... Selecting previously unselected package dh-elpa-helper. Preparing to unpack .../038-dh-elpa-helper_2.0.10_all.deb ... Unpacking dh-elpa-helper (2.0.10) ... Selecting previously unselected package emacsen-common. Preparing to unpack .../039-emacsen-common_3.0.4_all.deb ... Unpacking emacsen-common (3.0.4) ... Selecting previously unselected package cmake-data. Preparing to unpack .../040-cmake-data_3.22.1-1_all.deb ... Unpacking cmake-data (3.22.1-1) ... Selecting previously unselected package cmake. Preparing to unpack .../041-cmake_3.22.1-1+b1_arm64.deb ... Unpacking cmake (3.22.1-1+b1) ... Selecting previously unselected package gcc-11-i686-linux-gnu-base:arm64. Preparing to unpack .../042-gcc-11-i686-linux-gnu-base_11.2.0-16cross1_arm64.deb ... Unpacking gcc-11-i686-linux-gnu-base:arm64 (11.2.0-16cross1) ... Selecting previously unselected package cpp-11-i686-linux-gnu. Preparing to unpack .../043-cpp-11-i686-linux-gnu_11.2.0-16cross1_arm64.deb ... Unpacking cpp-11-i686-linux-gnu (11.2.0-16cross1) ... Selecting previously unselected package cpp-i686-linux-gnu. Preparing to unpack .../044-cpp-i686-linux-gnu_4%3a11.2.0-2_arm64.deb ... Unpacking cpp-i686-linux-gnu (4:11.2.0-2) ... Selecting previously unselected package cross-config. Preparing to unpack .../045-cross-config_2.6.18+nmu2_all.deb ... Unpacking cross-config (2.6.18+nmu2) ... Selecting previously unselected package binutils-i686-linux-gnu. Preparing to unpack .../046-binutils-i686-linux-gnu_2.38-1_arm64.deb ... Unpacking binutils-i686-linux-gnu (2.38-1) ... Selecting previously unselected package gcc-11-cross-base. Preparing to unpack .../047-gcc-11-cross-base_11.2.0-16cross1_all.deb ... Unpacking gcc-11-cross-base (11.2.0-16cross1) ... Selecting previously unselected package libc6-i386-cross. Preparing to unpack .../048-libc6-i386-cross_2.33-1cross1_all.deb ... Unpacking libc6-i386-cross (2.33-1cross1) ... Selecting previously unselected package libgcc-s1-i386-cross. Preparing to unpack .../049-libgcc-s1-i386-cross_11.2.0-16cross1_all.deb ... Unpacking libgcc-s1-i386-cross (11.2.0-16cross1) ... Selecting previously unselected package libgomp1-i386-cross. Preparing to unpack .../050-libgomp1-i386-cross_11.2.0-16cross1_all.deb ... Unpacking libgomp1-i386-cross (11.2.0-16cross1) ... Selecting previously unselected package libitm1-i386-cross. Preparing to unpack .../051-libitm1-i386-cross_11.2.0-16cross1_all.deb ... Unpacking libitm1-i386-cross (11.2.0-16cross1) ... Selecting previously unselected package libatomic1-i386-cross. Preparing to unpack .../052-libatomic1-i386-cross_11.2.0-16cross1_all.deb ... Unpacking libatomic1-i386-cross (11.2.0-16cross1) ... Selecting previously unselected package libasan6-i386-cross. Preparing to unpack .../053-libasan6-i386-cross_11.2.0-16cross1_all.deb ... Unpacking libasan6-i386-cross (11.2.0-16cross1) ... Selecting previously unselected package libstdc++6-i386-cross. Preparing to unpack .../054-libstdc++6-i386-cross_11.2.0-16cross1_all.deb ... Unpacking libstdc++6-i386-cross (11.2.0-16cross1) ... Selecting previously unselected package libubsan1-i386-cross. Preparing to unpack .../055-libubsan1-i386-cross_11.2.0-16cross1_all.deb ... Unpacking libubsan1-i386-cross (11.2.0-16cross1) ... Selecting previously unselected package libquadmath0-i386-cross. Preparing to unpack .../056-libquadmath0-i386-cross_11.2.0-16cross1_all.deb ... Unpacking libquadmath0-i386-cross (11.2.0-16cross1) ... Selecting previously unselected package libgcc-11-dev-i386-cross. Preparing to unpack .../057-libgcc-11-dev-i386-cross_11.2.0-16cross1_all.deb ... Unpacking libgcc-11-dev-i386-cross (11.2.0-16cross1) ... Selecting previously unselected package gcc-11-i686-linux-gnu. Preparing to unpack .../058-gcc-11-i686-linux-gnu_11.2.0-16cross1_arm64.deb ... Unpacking gcc-11-i686-linux-gnu (11.2.0-16cross1) ... Selecting previously unselected package gcc-i686-linux-gnu. Preparing to unpack .../059-gcc-i686-linux-gnu_4%3a11.2.0-2_arm64.deb ... Unpacking gcc-i686-linux-gnu (4:11.2.0-2) ... Selecting previously unselected package linux-libc-dev-i386-cross. Preparing to unpack .../060-linux-libc-dev-i386-cross_5.15.5-1cross1_all.deb ... Unpacking linux-libc-dev-i386-cross (5.15.5-1cross1) ... Selecting previously unselected package libc6-dev-i386-cross. Preparing to unpack .../061-libc6-dev-i386-cross_2.33-1cross1_all.deb ... Unpacking libc6-dev-i386-cross (2.33-1cross1) ... Selecting previously unselected package libstdc++-11-dev-i386-cross. Preparing to unpack .../062-libstdc++-11-dev-i386-cross_11.2.0-16cross1_all.deb ... Unpacking libstdc++-11-dev-i386-cross (11.2.0-16cross1) ... Selecting previously unselected package g++-11-i686-linux-gnu. 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Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up cmake (3.22.1-1+b1) ... Setting up debhelper (13.6) ... Setting up dh-exec (0.23.4) ... Setting up libubsan1-i386-cross (11.2.0-16cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libgcc-11-dev-i386-cross (11.2.0-16cross1) ... Setting up libconfig-auto-perl (0.44-1.1) ... Setting up gcc-11-i686-linux-gnu (11.2.0-16cross1) ... Setting up gcc-i686-linux-gnu (4:11.2.0-2) ... Setting up libstdc++-11-dev-i386-cross (11.2.0-16cross1) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu2) ... Setting up g++-11-i686-linux-gnu (11.2.0-16cross1) ... 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Processing triggers for libc-bin (2.33-5) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (i386 included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.9.0-0.bpo.2-arm64 #1 SMP Debian 5.9.6-1~bpo10+1 (2020-11-19) arm64 (aarch64) Toolchain package versions: binutils_2.38-1 dpkg-dev_1.21.1 g++-11_11.2.0-16 gcc-11_11.2.0-16 libc6-dev_2.33-5 libstdc++-11-dev_11.2.0-16 libstdc++-11-dev-i386-cross_11.2.0-16cross1 libstdc++6_11.2.0-16 libstdc++6-i386-cross_11.2.0-16cross1 linux-libc-dev_5.16.7-2 Package versions: adduser_3.118 apt_2.3.15 autoconf_2.71-2 automake_1:1.16.5-1.1 autopoint_0.21-4 autotools-dev_20220109.1 base-files_12.2 base-passwd_3.5.52 bash_5.1-6 binutils_2.38-1 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libhwasan0_11.2.0-16 libicu67_67.1-7 libidn2-0_2.3.2-2 libio-string-perl_1.08-3.1 libisl23_0.24-2 libitm1_11.2.0-16 libitm1-i386-cross_11.2.0-16cross1 libjpeg-dev_1:2.1.2-1 libjpeg62-turbo_1:2.1.2-1 libjpeg62-turbo-dev_1:2.1.2-1 libjsoncpp25_1.9.5-3 libk5crypto3_1.18.3-7 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-7 libkrb5support0_1.18.3-7 libldap-2.4-2_2.4.59+dfsg-1+b1 liblocale-gettext-perl_1.07-4+b2 liblsan0_11.2.0-16 liblz4-1_1.9.3-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.41-2 libmagic1_1:5.41-2 libmount1_2.37.3-1+b1 libmpc3_1.2.1-1 libmpfr6_4.1.0-3 libncurses6_6.3-2 libncursesw6_6.3-2 libnetcdf-dev_1:4.8.1-1 libnetcdf19_1:4.8.1-1 libnettle8_3.7.3-1 libnghttp2-14_1.43.0-1 libnifti2-2_3.0.1-8 libnifti2-dev_3.0.1-8 libnifticdf-dev_3.0.1-8 libnifticdf2_3.0.1-8 libniftiio-dev_3.0.1-8 libniftiio2_3.0.1-8 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.24.0-6 libpam-modules_1.4.0-11 libpam-modules-bin_1.4.0-11 libpam-runtime_1.4.0-11 libpam0g_1.4.0-11 libpcre2-8-0_10.39-3 libpcre3_2:8.39-13 libperl5.34_5.34.0-3 libpipeline1_1.5.5-1 libprocps8_2:3.3.17-6 libpsl5_0.21.0-1.2 libquadmath0_11.2.0-16 libquadmath0-i386-cross_11.2.0-16cross1 librhash0_1.4.2-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.27+dfsg2-3 libsasl2-modules-db_2.1.27+dfsg2-3 libseccomp2_2.5.3-2 libselinux1_3.3-1+b1 libsemanage-common_3.3-1 libsemanage2_3.3-1+b1 libsepol2_3.3-1 libsigsegv2_2.14-1 libsmartcols1_2.37.3-1+b1 libssh2-1_1.10.0-2 libssl-dev_1.1.1m-1 libssl1.1_1.1.1m-1 libstdc++-11-dev_11.2.0-16 libstdc++-11-dev-i386-cross_11.2.0-16cross1 libstdc++6_11.2.0-16 libstdc++6-i386-cross_11.2.0-16cross1 libsub-override-perl_0.09-2 libsystemd0_250.3-2 libsz2_1.0.6-1 libtasn1-6_4.18.0-4 libtinfo6_6.3-2 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.6-15 libtsan0_11.2.0-16 libubsan1_11.2.0-16 libubsan1-i386-cross_11.2.0-16cross1 libuchardet0_0.0.7-1 libudev1_250.3-2 libunistring2_1.0-1 libuuid1_2.37.3-1+b1 libuv1_1.43.0-1 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1 libxml-namespacesupport-perl_1.12-1.1 libxml-sax-base-perl_1.09-1.1 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-1 libxml2_2.9.12+dfsg-5+b1 libxxhash0_0.8.1-1 libyaml-perl_1.30-1 libznz-dev_3.0.1-8 libznz3_3.0.1-8 libzstd1_1.4.8+dfsg-3 linux-libc-dev_5.16.7-2 linux-libc-dev-i386-cross_5.15.5-1cross1 login_1:4.11.1+dfsg1-1 lsb-base_11.1.0 m4_1.4.18-5 make_4.3-4.1 man-db_2.10.1-1 mawk_1.3.4.20200120-3 mount_2.37.3-1+b1 ncurses-base_6.3-2 ncurses-bin_6.3-2 passwd_1:4.11.1+dfsg1-1 patch_2.7.6-7 perl_5.34.0-3 perl-base_5.34.0-3 perl-modules-5.34_5.34.0-3 po-debconf_1.0.21+nmu1 procps_2:3.3.17-6 rpcsvc-proto_1.4.2-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.01-1 tar_1.34+dfsg-1 tzdata_2021e-1 ucf_3.0043 util-linux_2.37.3-1+b1 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: libminc Binary: libminc2-5.2.0, libminc-dev Architecture: any Version: 2.4.03-5 Maintainer: Debian Med Packaging Team Uploaders: Steve M. Robbins , Andreas Tille Homepage: https://github.com/BIC-MNI/libminc Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/libminc Vcs-Git: https://salsa.debian.org/med-team/libminc.git Build-Depends: debhelper-compat (= 13), dh-exec, cmake, libnetcdf-dev, libnifti-dev, zlib1g-dev, libhdf5-dev Package-List: libminc-dev deb libdevel optional arch=any libminc2-5.2.0 deb libs optional arch=any Checksums-Sha1: 2cd8caad45d49cac77137e03ea584be76f32f923 809098 libminc_2.4.03.orig.tar.gz a3b1549c57a8c3ce3e8297d4bda0546c17712e0c 9108 libminc_2.4.03-5.debian.tar.xz Checksums-Sha256: 7ee57846641d92988e96eb6d2c88ff2d922cd2b42a9e6256cf4213953ca896e4 809098 libminc_2.4.03.orig.tar.gz 65d6a719c7057f68c05d91e217baea515327d1216bbd467001c9cdb743ef26b4 9108 libminc_2.4.03-5.debian.tar.xz Files: 98b270f1ce536346662c34ee85e3e22a 809098 libminc_2.4.03.orig.tar.gz 33686aeb0cc325fbcdc61ca1ec5c2376 9108 libminc_2.4.03-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmHy/tQRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtH4Tw//QhZNVBobHyfzCC0iEnv18MKWrqDNWspo kX9ZgG+LqtnDj4bkCOzpDJm4VhjC6zERyVo0jQXAFIbFaePRfbiIQTR+Zv6zgCuS UrAm58M5FfIvHpwaMMzPLn5gOsa0/3wpkqe4YW6IFsr43rP6OSR6gW86sNqS/nPy lvXqoB9nqMLgmqD7yMRSFwR55V/9TJnv6tBjRTQ20G5KsmEvtIEECkITAnlLdZGj LSdERjT+GwSEz4mL/AH+54kceAShzInFCxOVNZG2sUIgzdGT86OLgUaMmXnCNyFe xb0YPzWNFlE/hTgn2g1Vtg5BJiBnnz+W3GPnnv0fSNZjpKe9me5J7xkWB6CDqUmC rgAiffnlKrmvU1bNAwSSsAPZIxU80mw9TUB7DdLFj2rIDbJjHr65hnotLepl9LcZ Aaqgc86HFKfUEnPfyErUolaSGn1jw4r3jAXgxlL5RjZEZQv0QLM9Yli5oqS5oS9g mkDSw/x6fJ4a3PDk2XCrDUEHJv4O+kwSySsYrZMcwfXmno6fuOy0vr0zbrD2M53W CvQmkeUcgkpWa1MsR7X1y0RAC4UIfmrLb8PJ9dfWOJ8HraL1BG3j8TQUWsKkwHrj 11FLoQyuLq+woJmVLY/Vm4DZ/X0IQoTmxEhBbszeboFy6LT1GZ/pUxU99Qq1Oaca TgEUWc1Yliw= =65kO -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.OWk2aup8/trustedkeys.kbx': General error gpgv: Signature made Thu Jan 27 20:21:40 2022 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify signature ./libminc_2.4.03-5.dsc dpkg-source: info: extracting libminc in /<> dpkg-source: info: unpacking libminc_2.4.03.orig.tar.gz dpkg-source: info: unpacking libminc_2.4.03-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying build-using-system-find-dot-cmake dpkg-source: info: applying fix-uselibminc-cmake dpkg-source: info: applying netcdf-4.6.patch dpkg-source: info: applying remove-rpath.patch dpkg-source: info: applying initialize_arrays_in_tests.patch dpkg-source: info: applying disable-dimension-test.patch Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Timed Build Commands | +------------------------------------------------------------------------------+ ulimit -c --------- 0 I: Finished running 'ulimit -c'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.i386 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_GB.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmutg PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=crossqa-sid SCHROOT_CHROOT_NAME=crossqa-sid SCHROOT_COMMAND=env SCHROOT_GID=1002 SCHROOT_GROUP=helmutg SCHROOT_SESSION_ID=crossqa-sid-2e40b8d0-91c7-44b1-acdb-3e93d5d73c11 SCHROOT_UID=1002 SCHROOT_USER=helmutg SHELL=/bin/sh USER=helmutg dpkg-buildpackage ----------------- Command: dpkg-buildpackage -ai386 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package libminc dpkg-buildpackage: info: source version 2.4.03-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type i686-linux-gnu does not match CC system type aarch64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' rm -f cmake-modules/*HDF5* dh_auto_configure -- -DLIB_SUFFIX=/i386-linux-gnu -DBUILD_TESTING:BOOL=ON -DLIBMINC_BUILD_EZMINC_EXAMPLES:BOOL=ON -DLIBMINC_BUILD_SHARED_LIBS:BOOL=ON -DLIBMINC_MINC1_SUPPORT:BOOL=ON -DLIBMINC_USE_SYSTEM_NIFTI:BOOL=ON cd obj-i686-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=i686 -DCMAKE_C_COMPILER=i686-linux-gnu-gcc -DCMAKE_CXX_COMPILER=i686-linux-gnu-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/i686-linux-gnu-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/i686-linux-gnu-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/i686-linux-gnu-qmake -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu -DLIB_SUFFIX=/i386-linux-gnu -DBUILD_TESTING:BOOL=ON -DLIBMINC_BUILD_EZMINC_EXAMPLES:BOOL=ON -DLIBMINC_BUILD_SHARED_LIBS:BOOL=ON -DLIBMINC_MINC1_SUPPORT:BOOL=ON -DLIBMINC_USE_SYSTEM_NIFTI:BOOL=ON .. -- The C compiler identification is GNU 11.2.0 -- The CXX compiler identification is GNU 11.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/i686-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/i686-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Deprecation Warning at CMakeLists.txt:25 (CMAKE_MINIMUM_REQUIRED): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found NetCDF headers: /usr/include -- Found NetCDF library: /usr/lib/i386-linux-gnu/libnetcdf.so -- Found ZLIB: /usr/lib/i386-linux-gnu/libz.so (found version "1.2.11") -- HDF5 C compiler wrapper is unable to compile a minimal HDF5 program. -- Found HDF5: /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so (found version "1.10.7") found components: C -- Looking for mkstemp -- Looking for mkstemp - found -- Looking for tmpnam -- Looking for tmpnam - found -- Looking for tempnam -- Looking for tempnam - found -- Looking for strerror -- Looking for strerror - found -- Looking for popen -- Looking for popen - found -- Looking for fork -- Looking for fork - found -- Looking for vfork -- Looking for vfork - found -- Looking for fdopen -- Looking for fdopen - found -- Looking for strdup -- Looking for strdup - found -- Looking for getpwnam -- Looking for getpwnam - found -- Looking for select -- Looking for select - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for system -- Looking for system - found -- Looking for rint -- Looking for rint - found -- Looking for copysign -- Looking for copysign - found -- Looking for round -- Looking for round - found -- Looking for srand48 -- Looking for srand48 - found -- Looking for drand48 -- Looking for drand48 - found -- Looking for sleep -- Looking for sleep - found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for include file float.h -- Looking for include file float.h - found -- Looking for include file sys/dir.h -- Looking for include file sys/dir.h - found -- Looking for include file sys/ndir.h -- Looking for include file sys/ndir.h - not found -- Looking for include file sys/stat.h -- Looking for include file sys/stat.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file sys/wait.h -- Looking for include file sys/wait.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file time.h -- Looking for include file time.h - found -- Looking for include file values.h -- Looking for include file values.h - found -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file memory.h -- Looking for include file memory.h - found -- Looking for include file stdlib.h -- Looking for include file stdlib.h - found -- Looking for include file fcntl.h -- Looking for include file fcntl.h - found -- Looking for include file dlfcn.h -- Looking for include file dlfcn.h - found -- Looking for include file vfork.h -- Looking for include file vfork.h - not found -- Looking for include file inttypes.h -- Looking for include file inttypes.h - found -- Looking for include file string.h -- Looking for include file string.h - found -- Looking for include file strings.h -- Looking for include file strings.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Looking for include file sys/select.h -- Looking for include file sys/select.h - found -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR PKGCONFIG_EXECUTABLE PKG_CONFIG_EXECUTABLE QMAKE_EXECUTABLE -- Build files have been written to: /<>/obj-i686-linux-gnu make[1]: Leaving directory '/<>' dh_auto_build -a cd obj-i686-linux-gnu && make -j1 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/<>/obj-i686-linux-gnu' /usr/bin/cmake -S/<> -B/<>/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-i686-linux-gnu/CMakeFiles /<>/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-i686-linux-gnu' make -f CMakeFiles/minc2.dir/build.make CMakeFiles/minc2.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/CMakeFiles/minc2.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f CMakeFiles/minc2.dir/build.make CMakeFiles/minc2.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 1%] Building C object CMakeFiles/minc2.dir/libsrc2/convert.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/convert.c.o -MF CMakeFiles/minc2.dir/libsrc2/convert.c.o.d -o CMakeFiles/minc2.dir/libsrc2/convert.c.o -c /<>/libsrc2/convert.c /<>/libsrc2/convert.c: In function ‘miconvert_voxel_to_real’: /<>/libsrc2/convert.c:107:39: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 107 | miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); | ^~~~~~~ /<>/libsrc2/convert.c: In function ‘miset_real_value’: /<>/libsrc2/convert.c:256:45: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 256 | miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); | ^~~~~ /<>/libsrc2/convert.c: In function ‘miget_volume_real_range’: /<>/libsrc2/convert.c:528:23: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 528 | buffer = malloc(n * sizeof(double)); | ^ /<>/libsrc2/convert.c:554:23: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 554 | buffer = malloc(n * sizeof(double)); | ^ [ 1%] Building C object CMakeFiles/minc2.dir/libsrc2/datatype.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/datatype.c.o -MF CMakeFiles/minc2.dir/libsrc2/datatype.c.o.d -o CMakeFiles/minc2.dir/libsrc2/datatype.c.o -c /<>/libsrc2/datatype.c [ 2%] Building C object CMakeFiles/minc2.dir/libsrc2/dimension.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/dimension.c.o -MF CMakeFiles/minc2.dir/libsrc2/dimension.c.o.d -o CMakeFiles/minc2.dir/libsrc2/dimension.c.o -c /<>/libsrc2/dimension.c /<>/libsrc2/dimension.c: In function ‘micopy_dimension’: /<>/libsrc2/dimension.c:99:61: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 99 | handle->offsets = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/libsrc2/dimension.c:135:60: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 135 | handle->widths = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/libsrc2/dimension.c: In function ‘micreate_dimension’: /<>/libsrc2/dimension.c:288:51: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 288 | handle->widths = ( double * ) malloc ( length * sizeof ( double ) ); | ~~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/libsrc2/dimension.c: In function ‘miget_volume_dimensions’: /<>/libsrc2/dimension.c:417:20: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 417 | number_of_dims = volume->number_of_dims; | ^~~~~~ /<>/libsrc2/dimension.c:422:16: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 422 | max_dims = array_length; | ^~~~~~~~~~~~ /<>/libsrc2/dimension.c: In function ‘miset_apparent_dimension_order’: /<>/libsrc2/dimension.c:486:69: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 486 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); | ^ /<>/libsrc2/dimension.c: In function ‘miset_apparent_dimension_order_by_name’: /<>/libsrc2/dimension.c:580:69: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 580 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); | ^ /<>/libsrc2/dimension.c: In function ‘miget_dimension_offsets’: /<>/libsrc2/dimension.c:1036:43: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 1036 | offsets[j] = dimension->start + ( i * dimension->step ); | ^ /<>/libsrc2/dimension.c: In function ‘miset_dimension_offsets’: /<>/libsrc2/dimension.c:1083:47: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1083 | ( double * ) malloc ( dimension->length * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/libsrc2/dimension.c: In function ‘miset_dimension_sampling_flag’: /<>/libsrc2/dimension.c:1136:21: warning: unsigned conversion from ‘int’ to ‘midimattr_t’ {aka ‘unsigned int’} changes value from ‘-2’ to ‘4294967294’ [-Wsign-conversion] 1136 | dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; | ^~ /<>/libsrc2/dimension.c:1138:21: warning: unsigned conversion from ‘int’ to ‘midimattr_t’ {aka ‘unsigned int’} changes value from ‘-3’ to ‘4294967293’ [-Wsign-conversion] 1138 | dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; | ^~ /<>/libsrc2/dimension.c: In function ‘miget_dimension_start’: /<>/libsrc2/dimension.c:1356:57: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 1356 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /<>/libsrc2/dimension.c:1362:61: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 1362 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /<>/libsrc2/dimension.c:1369:63: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 1369 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /<>/libsrc2/dimension.c: In function ‘miset_dimension_widths’: /<>/libsrc2/dimension.c:1651:65: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1651 | dimension->widths = ( double * ) malloc ( dimension->length * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ [ 2%] Building C object CMakeFiles/minc2.dir/libsrc2/free.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/free.c.o -MF CMakeFiles/minc2.dir/libsrc2/free.c.o.d -o CMakeFiles/minc2.dir/libsrc2/free.c.o -c /<>/libsrc2/free.c [ 2%] Building C object CMakeFiles/minc2.dir/libsrc2/grpattr.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/grpattr.c.o -MF CMakeFiles/minc2.dir/libsrc2/grpattr.c.o.d -o CMakeFiles/minc2.dir/libsrc2/grpattr.c.o -c /<>/libsrc2/grpattr.c /<>/libsrc2/grpattr.c: In function ‘full_path_for_attr’: /<>/libsrc2/grpattr.c:41:24: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 41 | snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", | ^~~~~~ /<>/libsrc2/grpattr.c:48:46: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 48 | strncpy ( fullpath, MI_ROOT_PATH "/" , length ); | ^~~~~~ /<>/libsrc2/grpattr.c:50:58: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 50 | strncpy ( fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length ); | ^~~~~~ /<>/libsrc2/grpattr.c:55:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 55 | strncat(fullpath, "/", length - strlen(fullpath) - 1); | ^ /<>/libsrc2/grpattr.c:58:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 58 | strncat(fullpath, path, length - strlen(fullpath) - 1); | ^ /<>/libsrc2/grpattr.c: In function ‘full_path_for_group’: /<>/libsrc2/grpattr.c:64:52: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 64 | strncpy(fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length); | ^~~~~~ /<>/libsrc2/grpattr.c:67:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 67 | strncat(fullpath, "/", length - strlen(fullpath) - 1); | ^ /<>/libsrc2/grpattr.c:70:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 70 | strncat(fullpath, path, length - strlen(fullpath) - 1); | ^ /<>/libsrc2/grpattr.c: In function ‘milist_recursion’: /<>/libsrc2/grpattr.c:124:22: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 124 | data->frame_ptr->grp_idx ); | ~~~~~~~~~~~~~~~^~~~~~~~~ /<>/libsrc2/grpattr.c:157:58: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 157 | data->frame_ptr->grp_idx - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /<>/libsrc2/grpattr.c: In function ‘milist_attr_op’: /<>/libsrc2/grpattr.c:198:44: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 198 | strncpy ( data->name_ptr, attr_name, data->name_len ); | ~~~~^~~~~~~~~~ /<>/libsrc2/grpattr.c: In function ‘milist_attr_next’: /<>/libsrc2/grpattr.c:223:49: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 223 | strncpy ( path, data->frame_ptr->relpath, maxpath ); | ^~~~~~~ /<>/libsrc2/grpattr.c: In function ‘milist_grp_next’: /<>/libsrc2/grpattr.c:314:49: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 314 | strncpy ( path, data->frame_ptr->relpath, maxpath ); | ^~~~~~~ /<>/libsrc2/grpattr.c:315:48: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 315 | strncpy ( data->frame_ptr->relpath, tmp, maxpath ); | ^~~~~~~ /<>/libsrc2/grpattr.c: In function ‘miget_attr_length’: /<>/libsrc2/grpattr.c:551:15: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 551 | *length = hdf_dims[0]; | ^~~~~~~~ /<>/libsrc2/grpattr.c: In function ‘miset_attr_values’: /<>/libsrc2/grpattr.c:906:31: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 906 | slength = strlen ( path ) - ( pch - path ); | ^ /<>/libsrc2/grpattr.c:910:41: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 910 | std_name[i] = path[pch - path + 1 + i]; | ^ [ 3%] Building C object CMakeFiles/minc2.dir/libsrc2/hyper.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/hyper.c.o -MF CMakeFiles/minc2.dir/libsrc2/hyper.c.o.d -o CMakeFiles/minc2.dir/libsrc2/hyper.c.o -c /<>/libsrc2/hyper.c /<>/libsrc2/hyper.c: In function ‘mirw_hyperslab_raw’: /<>/libsrc2/hyper.c:256:21: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 256 | icount[i] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:258:25: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 258 | restructure_array(ndims, buffer, icount, H5Tget_size(type_id), | ^~~~~ /<>/libsrc2/hyper.c:276:42: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 276 | icount[volume->dim_indices[i]] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:286:26: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 286 | temp_buffer=malloc(buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:294:33: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 294 | memcpy(temp_buffer,buffer,buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:296:25: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 296 | restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id), | ^~~~~ /<>/libsrc2/hyper.c: In function ‘mirw_hyperslab_icv’: /<>/libsrc2/hyper.c:433:11: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 433 | ndims = volume->number_of_dims; | ^~~~~~ /<>/libsrc2/hyper.c:445:32: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 445 | mspc_id = H5Screate_simple(ndims, hdf_count, NULL); | ^~~~~ /<>/libsrc2/hyper.c:453:44: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 453 | miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size); | ^~~~~ /<>/libsrc2/hyper.c:496:21: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 496 | slice_ndims = ndims; | ^~~~~ /<>/libsrc2/hyper.c:507:14: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 507 | for (i = slice_ndims; i < ndims; i++ ) { | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:515:57: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 515 | image_slice_max_buffer=malloc(total_number_of_slices*sizeof(double)); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:523:57: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 523 | image_slice_min_buffer=malloc(total_number_of_slices*sizeof(double)); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:661:21: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 661 | icount[i] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:663:25: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 663 | restructure_array(ndims, buffer, icount, H5Tget_size(buffer_type_id),volume->dim_indices, dir); | ^~~~~ /<>/libsrc2/hyper.c:674:42: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 674 | icount[volume->dim_indices[i]] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:677:40: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 677 | imap[volume->dim_indices[i]] = i; | ^ /<>/libsrc2/hyper.c:684:26: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 684 | temp_buffer=malloc(buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:691:33: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 691 | memcpy(temp_buffer,buffer,buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:694:27: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 694 | restructure_array(ndims, temp_buffer, icount, H5Tget_size(buffer_type_id), imap, idir); | ^~~~~ /<>/libsrc2/hyper.c: In function ‘mirw_hyperslab_normalized’: /<>/libsrc2/hyper.c:922:11: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 922 | ndims = volume->number_of_dims; | ^~~~~~ In file included from /<>/libcommon/minc2_error.h:38, from /<>/libsrc2/minc2.h:11, from /<>/libsrc2/hyper.c:16: /<>/libsrc2/hyper.c:933:50: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 933 | MI_CHECK_HDF_CALL(mspc_id = H5Screate_simple(ndims, hdf_count, NULL),"H5Screate_simple"); | ^~~~~ /<>/libcommon/minc_error.h:188:42: note: in definition of macro ‘MI_CHECK_HDF_CALL’ 188 | #define MI_CHECK_HDF_CALL(var,call) {if((var)<0) MI_LOG_ERROR(MI2_MSG_HDF5,call);} | ^~~ /<>/libsrc2/hyper.c:940:43: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 940 | miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size); | ^~~~~ /<>/libsrc2/hyper.c:941:43: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 941 | miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size); | ^~~~~ /<>/libsrc2/hyper.c:980:21: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 980 | slice_ndims = ndims; | ^~~~~ /<>/libsrc2/hyper.c:991:14: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 991 | for (i = slice_ndims; i < ndims; i++ ) { | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:999:57: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 999 | image_slice_max_buffer=malloc(total_number_of_slices*sizeof(double)); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:1000:57: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1000 | image_slice_min_buffer=malloc(total_number_of_slices*sizeof(double)); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:1052:31: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1052 | temp_buffer=(double*)malloc(buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:1103:22: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1103 | icount[i] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:1105:25: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1105 | restructure_array(ndims, buffer, icount, H5Tget_size(buffer_type_id),volume->dim_indices, dir); | ^~~~~ /<>/libsrc2/hyper.c:1116:42: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1116 | icount[volume->dim_indices[i]] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:1119:40: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 1119 | imap[volume->dim_indices[i]] = i; | ^ /<>/libsrc2/hyper.c:1125:25: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1125 | temp_buffer2=malloc(input_buffer_size); | ^~~~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:1132:32: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1132 | memcpy(temp_buffer2,buffer,input_buffer_size); | ^~~~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:1135:25: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1135 | restructure_array(ndims, temp_buffer2, icount, H5Tget_size(buffer_type_id), imap, idir); | ^~~~~ [ 3%] Building C object CMakeFiles/minc2.dir/libsrc2/label.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/label.c.o -MF CMakeFiles/minc2.dir/libsrc2/label.c.o.d -o CMakeFiles/minc2.dir/libsrc2/label.c.o -c /<>/libsrc2/label.c /<>/libsrc2/label.c: In function ‘miswap4’: /<>/libsrc2/label.c:40:12: warning: conversion to ‘int’ from ‘unsigned int’ may change the sign of the result [-Wsign-conversion] 40 | return (tmp); | ^ /<>/libsrc2/label.c: In function ‘miget_label_value_by_index’: /<>/libsrc2/label.c:199:51: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 199 | result = H5Tget_member_value(volume->mtype_id,idx,value); | ^~~ [ 4%] Building C object CMakeFiles/minc2.dir/libsrc2/m2util.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/m2util.c.o -MF CMakeFiles/minc2.dir/libsrc2/m2util.c.o.d -o CMakeFiles/minc2.dir/libsrc2/m2util.c.o -c /<>/libsrc2/m2util.c /<>/libsrc2/m2util.c: In function ‘midownsample_slice’: /<>/libsrc2/m2util.c:1491:18: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1491 | x1 = x; | ^ /<>/libsrc2/m2util.c:1492:26: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1492 | y1 = y + ( j * scale ); | ^ /<>/libsrc2/m2util.c:1492:20: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1492 | y1 = y + ( j * scale ); | ^ /<>/libsrc2/m2util.c:1492:18: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1492 | y1 = y + ( j * scale ); | ^ /<>/libsrc2/m2util.c:1493:26: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1493 | z1 = z + ( k * scale ); | ^ /<>/libsrc2/m2util.c:1493:20: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1493 | z1 = z + ( k * scale ); | ^ /<>/libsrc2/m2util.c:1493:18: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1493 | z1 = z + ( k * scale ); | ^ /<>/libsrc2/m2util.c: In function ‘miconvert_hyperslab_to_real’: /<>/libsrc2/m2util.c:1602:46: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1602 | r = miget_slice_range ( volume, pos, volume->number_of_dims, | ~~~~~~^~~~~~~~~~~~~~~~ /<>/libsrc2/m2util.c:1627:52: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1627 | r = miget_slice_range ( volume, pos, volume->number_of_dims, | ~~~~~~^~~~~~~~~~~~~~~~ /<>/libsrc2/m2util.c: In function ‘minc_update_thumbnail’: /<>/libsrc2/m2util.c:1719:25: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1719 | osize[i] = isize[i] / scale; | ^ /<>/libsrc2/m2util.c:1779:20: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); | ^ /<>/libsrc2/m2util.c:1779:14: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); | ^~~~~ /<>/libsrc2/m2util.c:1782:15: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1782 | out_bytes = osize[1] * osize[2] * sizeof ( double ); | ^~~~~ /<>/libsrc2/m2util.c:1785:14: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1785 | count[0] = scale; | ^~~~~ /<>/libsrc2/m2util.c:1800:22: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1800 | start[0] = slice * scale; | ^ /<>/libsrc2/m2util.c:1803:16: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1803 | count[0] = scale; | ^~~~~ /<>/libsrc2/m2util.c: In function ‘alloc1d’: /<>/libsrc2/m2util.c:1914:52: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1914 | return ( ( double * ) malloc ( sizeof ( double ) * n ) ); | ^ /<>/libsrc2/m2util.c: In function ‘alloc2d’: /<>/libsrc2/m2util.c:1923:34: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1923 | mat = ( double ** ) malloc ( n * sizeof ( double * ) ); | ^ /<>/libsrc2/m2util.c:1930:38: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1930 | mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); | ^ [ 4%] Building C object CMakeFiles/minc2.dir/libsrc2/record.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/record.c.o -MF CMakeFiles/minc2.dir/libsrc2/record.c.o.d -o CMakeFiles/minc2.dir/libsrc2/record.c.o -c /<>/libsrc2/record.c /<>/libsrc2/record.c: In function ‘miget_record_field_name’: /<>/libsrc2/record.c:57:50: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 57 | *name = H5Tget_member_name(volume->ftype_id, index); | ^~~~~ /<>/libsrc2/record.c: In function ‘miset_record_field_name’: /<>/libsrc2/record.c:91:20: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 91 | offset = index * H5Tget_size(ftype_id); | ^ [ 5%] Building C object CMakeFiles/minc2.dir/libsrc2/slice.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/slice.c.o -MF CMakeFiles/minc2.dir/libsrc2/slice.c.o.d -o CMakeFiles/minc2.dir/libsrc2/slice.c.o -c /<>/libsrc2/slice.c /<>/libsrc2/slice.c: In function ‘mirw_slice_minmax’: /<>/libsrc2/slice.c:72:11: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 72 | ndims = H5Sget_simple_extent_ndims ( fspc_id ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 5%] Building C object CMakeFiles/minc2.dir/libsrc2/valid.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/valid.c.o -MF CMakeFiles/minc2.dir/libsrc2/valid.c.o.d -o CMakeFiles/minc2.dir/libsrc2/valid.c.o -c /<>/libsrc2/valid.c [ 5%] Building C object CMakeFiles/minc2.dir/libsrc2/volprops.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/volprops.c.o -MF CMakeFiles/minc2.dir/libsrc2/volprops.c.o.d -o CMakeFiles/minc2.dir/libsrc2/volprops.c.o -c /<>/libsrc2/volprops.c /<>/libsrc2/volprops.c: In function ‘miget_volume_props’: /<>/libsrc2/volprops.c:133:60: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 133 | handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); | ^ /<>/libsrc2/volprops.c:139:33: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 139 | handle->edge_lengths[i] = dims[i]; | ^~~~ /<>/libsrc2/volprops.c:151:43: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 151 | fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, | ^ /<>/libsrc2/volprops.c:156:34: warning: conversion to ‘int’ from ‘unsigned int’ may change the sign of the result [-Wsign-conversion] 156 | handle->zlib_level = cd_values[0]; | ^~~~~~~~~ /<>/libsrc2/volprops.c: In function ‘miset_props_blocking’: /<>/libsrc2/volprops.c:432:52: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 432 | props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); | ^ [ 6%] Building C object CMakeFiles/minc2.dir/libsrc2/volume.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/volume.c.o -MF CMakeFiles/minc2.dir/libsrc2/volume.c.o.d -o CMakeFiles/minc2.dir/libsrc2/volume.c.o -c /<>/libsrc2/volume.c /<>/libsrc2/volume.c: In function ‘_hdf_open’: /<>/libsrc2/volume.c:120:117: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 120 | H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc2/volume.c:132:24: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 132 | fd = H5Fopen(path, mode, prp_id); | ^~~~ /<>/libsrc2/volume.c: In function ‘_hdf_create’: /<>/libsrc2/volume.c:224:115: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 224 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*100, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc2/volume.c:227:26: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 227 | fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ /<>/libsrc2/volume.c: In function ‘micreate_volume’: /<>/libsrc2/volume.c:634:23: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 634 | hdf_size[i] = create_props->edge_lengths[i]; | ^~~~~~~~~~~~ In file included from /<>/libcommon/minc2_error.h:38, from /<>/libsrc2/minc2.h:11, from /<>/libsrc2/volume.c:32: /<>/libsrc2/volume.c:664:72: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 664 | MI_CHECK_HDF_CALL_RET(stat = H5Pset_deflate(hdf_plist, create_props->zlib_level),"H5Pset_deflate") | ~~~~~~~~~~~~^~~~~~~~~~~~ /<>/libcommon/minc_error.h:189:46: note: in definition of macro ‘MI_CHECK_HDF_CALL_RET’ 189 | #define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);} | ^~~ /<>/libsrc2/volume.c:896:70: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 896 | handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions * | ^ In file included from /<>/libcommon/minc2_error.h:38, from /<>/libsrc2/minc2.h:11, from /<>/libsrc2/volume.c:32: /<>/libsrc2/volume.c:900:63: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 900 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM,number_of_dimensions * sizeof(midimhandle_t)); | ^ /<>/libcommon/minc_error.h:187:75: note: in definition of macro ‘MI_LOG_ERROR’ 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /<>/libsrc2/volume.c:988:73: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 988 | props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int)); | ^ /<>/libsrc2/volume.c: In function ‘_miget_irregular_spacing’: /<>/libsrc2/volume.c:1171:35: warning: conversion from ‘hssize_t’ {aka ‘long long int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1171 | hdim->offsets = malloc(n_points * sizeof(double)); | ~~~~~~~~~^~~~~~~~~~~~~~~~ /<>/libsrc2/volume.c:1195:34: warning: conversion from ‘hssize_t’ {aka ‘long long int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1195 | hdim->widths = malloc(n_points * sizeof(double)); | ~~~~~~~~~^~~~~~~~~~~~~~~~ /<>/libsrc2/volume.c: In function ‘miopen_volume’: /<>/libsrc2/volume.c:1421:62: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1421 | handle->dim_handles = (midimhandle_t *)malloc(n_dimensions * | ^ In file included from /<>/libcommon/minc2_error.h:38, from /<>/libsrc2/minc2.h:11, from /<>/libsrc2/volume.c:32: /<>/libsrc2/volume.c:1426:56: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1426 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_dimensions * sizeof(midimhandle_t)); | ^ /<>/libcommon/minc_error.h:187:75: note: in definition of macro ‘MI_LOG_ERROR’ 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /<>/libsrc2/volume.c:1509:59: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1509 | hid_t tmp_id = H5Tget_member_type(handle->ftype_id, i); | ^ /<>/libsrc2/volume.c:1510:63: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1510 | size_t tmp_off = H5Tget_member_offset(handle->ftype_id, i); | ^ /<>/libsrc2/volume.c:1511:59: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1511 | char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); | ^ In file included from /<>/libsrc2/volume.c:33: /<>/libsrc2/minc2_private.h:14:22: warning: ‘%s’ directive writing up to 127 bytes into a region of size 107 [-Wformat-overflow=] 14 | #define MI_ROOT_PATH "/minc-2.0" | ^~~~~~~~~~~ /<>/libsrc2/volume.c:1216:17: note: in expansion of macro ‘MI_ROOT_PATH’ 1216 | sprintf(path, MI_ROOT_PATH "/dimensions/%s", dimname); | ^~~~~~~~~~~~ /<>/libsrc2/volume.c:1749:53: note: format string is defined here 1749 | miset_attribute(volume, MI_ROOT_PATH "/image/0/image", "valid_range", | ^~ In file included from /usr/i686-linux-gnu/include/stdio.h:866, from /usr/include/hdf5/serial/H5Epublic.h:20, from /usr/include/hdf5/serial/hdf5.h:26, from /<>/libsrc2/volume.c:8: /usr/i686-linux-gnu/include/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 22 and 149 bytes into a destination of size 128 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 6%] Building C object CMakeFiles/minc2.dir/libcommon/minc2_error.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/minc2_error.c.o -MF CMakeFiles/minc2.dir/libcommon/minc2_error.c.o.d -o CMakeFiles/minc2.dir/libcommon/minc2_error.c.o -c /<>/libcommon/minc2_error.c [ 7%] Building C object CMakeFiles/minc2.dir/libcommon/minc_config.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/minc_config.c.o -MF CMakeFiles/minc2.dir/libcommon/minc_config.c.o.d -o CMakeFiles/minc2.dir/libcommon/minc_config.c.o -c /<>/libcommon/minc_config.c /<>/libcommon/minc_config.c: In function ‘miread_cfg’: /<>/libcommon/minc_config.c:84:42: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 84 | strncpy(buffer, tmp, maxlen); | ^~~~~~ [ 7%] Building C object CMakeFiles/minc2.dir/libcommon/minc_error.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/minc_error.c.o -MF CMakeFiles/minc2.dir/libcommon/minc_error.c.o.d -o CMakeFiles/minc2.dir/libcommon/minc_error.c.o -c /<>/libcommon/minc_error.c [ 8%] Building C object CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -MF CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o.d -o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -c /<>/libcommon/ParseArgv.c /<>/libcommon/ParseArgv.c: In function ‘PrintUsage’: /<>/libcommon/ParseArgv.c:439:32: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 439 | numSpaces = width + 1 - strlen(infoPtr->key); | ^ /<>/libcommon/ParseArgv.c:439:22: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 439 | numSpaces = width + 1 - strlen(infoPtr->key); | ^~~~~ [ 8%] Building C object CMakeFiles/minc2.dir/libcommon/read_file_names.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -MF CMakeFiles/minc2.dir/libcommon/read_file_names.c.o.d -o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -c /<>/libcommon/read_file_names.c /<>/libcommon/read_file_names.c: In function ‘read_file_names’: /<>/libcommon/read_file_names.c:53:34: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 53 | files = malloc(sizeof(*files) * array_size); | ^ /<>/libcommon/read_file_names.c:76:48: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 76 | files = realloc(files, sizeof(*files) * array_size); | ^ [ 9%] Building C object CMakeFiles/minc2.dir/libcommon/restructure.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/restructure.c.o -MF CMakeFiles/minc2.dir/libcommon/restructure.c.o.d -o CMakeFiles/minc2.dir/libcommon/restructure.c.o -c /<>/libcommon/restructure.c /<>/libcommon/restructure.c: In function ‘restructure_array’: /<>/libcommon/restructure.c:134:21: warning: unsigned conversion from ‘int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘-1’ to ‘4294967295’ [-Wsign-conversion] 134 | offset_next = -1; /* Initialize. */ | ^ [ 9%] Building C object CMakeFiles/minc2.dir/libcommon/time_stamp.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -MF CMakeFiles/minc2.dir/libcommon/time_stamp.c.o.d -o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -c /<>/libcommon/time_stamp.c [ 9%] Building C object CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -MF CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o.d -o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -c /<>/libsrc/dim_conversion.c In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/dim_conversion.c:93: /<>/libsrc/dim_conversion.c: In function ‘MI_icv_dimconvert’: /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:161:37: note: in expansion of macro ‘ROUND’ 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:166:35: note: in expansion of macro ‘ROUND’ 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:175:38: note: in expansion of macro ‘ROUND’ 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:180:36: note: in expansion of macro ‘ROUND’ 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:189:36: note: in expansion of macro ‘ROUND’ 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:194:34: note: in expansion of macro ‘ROUND’ 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:123:23: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/minc_basic.h:200:26: note: in expansion of macro ‘MIN’ 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:161:37: note: in expansion of macro ‘ROUND’ 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:166:35: note: in expansion of macro ‘ROUND’ 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:175:38: note: in expansion of macro ‘ROUND’ 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:180:36: note: in expansion of macro ‘ROUND’ 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:189:36: note: in expansion of macro ‘ROUND’ 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:194:34: note: in expansion of macro ‘ROUND’ 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:123:23: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/minc_basic.h:200:26: note: in expansion of macro ‘MIN’ 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ [ 10%] Building C object CMakeFiles/minc2.dir/libsrc/image_conversion.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -MF CMakeFiles/minc2.dir/libsrc/image_conversion.c.o.d -o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -c /<>/libsrc/image_conversion.c /<>/libsrc/image_conversion.c: In function ‘miicv_setdbl’: /<>/libsrc/image_conversion.c:399:29: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 399 | icvp->user_do_range = value; | ^~~~~ /<>/libsrc/image_conversion.c:408:28: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 408 | icvp->user_do_norm = value; | ^~~~~ /<>/libsrc/image_conversion.c:411:30: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 411 | icvp->user_user_norm = value; | ^~~~~ /<>/libsrc/image_conversion.c:420:33: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 420 | icvp->user_do_fillvalue = value; | ^~~~~ /<>/libsrc/image_conversion.c:426:31: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 426 | icvp->user_do_dimconv = value; | ^~~~~ /<>/libsrc/image_conversion.c:429:30: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 429 | icvp->user_do_scalar = value; | ^~~~~ /<>/libsrc/image_conversion.c:432:14: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 432 | ival = value; | ^~~~~ /<>/libsrc/image_conversion.c:437:14: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 437 | ival = value; | ^~~~~ /<>/libsrc/image_conversion.c:442:14: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 442 | ival = value; | ^~~~~ /<>/libsrc/image_conversion.c:447:14: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 447 | ival = value; | ^~~~~ /<>/libsrc/image_conversion.c:455:32: warning: conversion from ‘double’ to ‘long int’ may change value [-Wfloat-conversion] 455 | icvp->user_dim_size[0] = value; | ^~~~~ /<>/libsrc/image_conversion.c:458:32: warning: conversion from ‘double’ to ‘long int’ may change value [-Wfloat-conversion] 458 | icvp->user_dim_size[1] = value; | ^~~~~ /<>/libsrc/image_conversion.c:461:32: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 461 | icvp->user_keep_aspect = value; | ^~~~~ /<>/libsrc/image_conversion.c:475:38: warning: conversion from ‘double’ to ‘long int’ may change value [-Wfloat-conversion] 475 | icvp->user_dim_size[idim] = value; | ^~~~~ /<>/libsrc/image_conversion.c: In function ‘miicv_inqint’: /<>/libsrc/image_conversion.c:774:13: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 774 | *value = dvalue; | ^~~~~~ /<>/libsrc/image_conversion.c: In function ‘miicv_inqlong’: /<>/libsrc/image_conversion.c:803:13: warning: conversion from ‘double’ to ‘long int’ may change value [-Wfloat-conversion] 803 | *value = dvalue; | ^~~~~~ In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/image_conversion.c:173: /<>/libsrc/image_conversion.c: In function ‘MI_icv_zero_buffer’: /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:161:37: note: in expansion of macro ‘ROUND’ 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:166:35: note: in expansion of macro ‘ROUND’ 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:175:38: note: in expansion of macro ‘ROUND’ 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:180:36: note: in expansion of macro ‘ROUND’ 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:189:36: note: in expansion of macro ‘ROUND’ 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:194:34: note: in expansion of macro ‘ROUND’ 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:123:23: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/minc_basic.h:200:26: note: in expansion of macro ‘MIN’ 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ [ 10%] Building C object CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -MF CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o.d -o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -c /<>/libsrc/minc_convenience.c /<>/libsrc/minc_convenience.c: In function ‘miset_valid_range’: /<>/libsrc/minc_convenience.c:430:17: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 430 | fval[0] = valid_range[0]; | ^~~~~~~~~~~ /<>/libsrc/minc_convenience.c:431:17: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 431 | fval[1] = valid_range[1]; | ^~~~~~~~~~~ /<>/libsrc/minc_convenience.c: In function ‘miattput_pointer’: /<>/libsrc/minc_convenience.c:638:10: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 638 | index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX)); | ^~~~~~ In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/minc_convenience.c:152: /<>/libsrc/minc_convenience.c: In function ‘miadd_child’: /<>/libsrc/minc_convenience.c:743:56: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 743 | if ((child_list = MALLOC(child_list_size+MAX_NC_NAME+ | ^ /<>/libsrc/minc_useful.h:138:39: note: in definition of macro ‘MALLOC’ 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) | ^~~~~~~ In file included from /<>/libsrc/minc_private.h:89, from /<>/libsrc/minc_convenience.c:152: /<>/libsrc/minc_convenience.c:746:49: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 746 | child_list_size+MAX_NC_NAME+strlen(MI_CHILD_SEPARATOR)); | ^ /<>/libcommon/minc_error.h:187:75: note: in definition of macro ‘MI_LOG_ERROR’ 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /<>/libsrc/minc_convenience.c:765:23: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 765 | child_list_size += strlen(MI_CHILD_SEPARATOR); | ^~ /<>/libsrc/minc_convenience.c:765:26: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 765 | child_list_size += strlen(MI_CHILD_SEPARATOR); | ^~~~~~ /<>/libsrc/minc_convenience.c:780:23: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); | ^~ /<>/libsrc/minc_convenience.c:780:26: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); | ^~~~~~ /<>/libsrc/minc_convenience.c: In function ‘miappend_history’: /<>/libsrc/minc_convenience.c:1378:30: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1378 | att_val = malloc(att_len + strlen(tm_stamp) + 2); | ^ [ 11%] Building C object CMakeFiles/minc2.dir/libsrc/nd_loop.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -MF CMakeFiles/minc2.dir/libsrc/nd_loop.c.o.d -o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -c /<>/libsrc/nd_loop.c [ 11%] Building C object CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -MF CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o.d -o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -c /<>/libsrc/netcdf_convenience.c In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/netcdf_convenience.c:182: /<>/libsrc/netcdf_convenience.c: In function ‘miexpand_file’: /<>/libsrc/netcdf_convenience.c:380:38: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 380 | compfile = MALLOC(strlen(path) + max_compression_code_length + 2, char); | ^ /<>/libsrc/minc_useful.h:138:39: note: in definition of macro ‘MALLOC’ 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) | ^~~~~~~ /<>/libsrc/netcdf_convenience.c: In function ‘miattputstr’: /<>/libsrc/netcdf_convenience.c:1033:38: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 1033 | strlen(value) + 1, value); | ~~~~~~~~~~~~~~^~~ [ 12%] Building C object CMakeFiles/minc2.dir/libsrc/value_conversion.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/value_conversion.c.o -MF CMakeFiles/minc2.dir/libsrc/value_conversion.c.o.d -o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o -c /<>/libsrc/value_conversion.c /<>/libsrc/value_conversion.c: In function ‘MI_convert_type’: /<>/libsrc/value_conversion.c:622:49: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 622 | (size_t) number_of_values*inincr); | ^ In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/value_conversion.c:98: /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:161:37: note: in expansion of macro ‘ROUND’ 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:166:35: note: in expansion of macro ‘ROUND’ 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:175:38: note: in expansion of macro ‘ROUND’ 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:180:36: note: in expansion of macro ‘ROUND’ 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:189:36: note: in expansion of macro ‘ROUND’ 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:194:34: note: in expansion of macro ‘ROUND’ 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:123:23: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/minc_basic.h:200:26: note: in expansion of macro ‘MIN’ 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ [ 12%] Building C object CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -MF CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o.d -o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -c /<>/libsrc/voxel_loop.c /<>/libsrc/voxel_loop.c: In function ‘update_history’: /<>/libsrc/voxel_loop.c:1182:15: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1182 | att_length += strlen(arg_string) + 1; | ^~ /<>/libsrc/voxel_loop.c:1182:18: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 1182 | att_length += strlen(arg_string) + 1; | ^~~~~~ [ 13%] Building C object CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -MF CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o.d -o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -c /<>/libsrc/hdf_convenience.c /<>/libsrc/hdf_convenience.c: In function ‘hdf_var_add’: /<>/libsrc/hdf_convenience.c:202:59: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 202 | new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims); | ^ In file included from /<>/libsrc/minc_private.h:89, from /<>/libsrc/hdf_convenience.c:8: /<>/libsrc/hdf_convenience.c:209:59: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 209 | MI_LOG_ERROR(MI_MSG_OUTOFMEM, sizeof(hsize_t) * ndims); | ^ /<>/libcommon/minc_error.h:187:75: note: in definition of macro ‘MI_LOG_ERROR’ 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_size’: /<>/libsrc/hdf_convenience.c:370:20: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 370 | int typ_size = H5Tget_size(typ_id); | ^~~~~~~~~~~ /<>/libsrc/hdf_convenience.c:371:20: warning: conversion from ‘hssize_t’ {aka ‘long long int’} to ‘int’ may change value [-Wconversion] 371 | int spc_size = H5Sget_simple_extent_npoints(spc_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_attname’: /<>/libsrc/hdf_convenience.c:455:38: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 455 | att_id = H5Aopen_idx(loc_id, attnum); | ^~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_attinq’: /<>/libsrc/hdf_convenience.c:578:25: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 578 | *length_ptr = typ_size; | ^~~~~~~~ /<>/libsrc/hdf_convenience.c:581:25: warning: conversion from ‘hssize_t’ {aka ‘long long int’} to ‘int’ may change value [-Wconversion] 581 | *length_ptr = H5Sget_simple_extent_npoints(spc_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_get_dimorder’: /<>/libsrc/hdf_convenience.c:667:14: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 667 | length = H5Tget_size(typ_id); | ^~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_dimdef’: /<>/libsrc/hdf_convenience.c:958:49: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 958 | hdf_set_length(var->dset_id, dimnm, length); | ^~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_attput’: /<>/libsrc/hdf_convenience.c:1147:30: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1147 | H5Tset_size(ftyp_id, val_len); | ^~~~~~~ /<>/libsrc/hdf_convenience.c:1185:33: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1185 | hsize_t temp_size = val_len; | ^~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_vardef’: /<>/libsrc/hdf_convenience.c:1322:19: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1322 | dims[i] = length; | ^~~~~~ /<>/libsrc/hdf_convenience.c:1369:60: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1369 | if( MI_MAX_VAR_BUFFER_SIZE > dims[i] * val * unit_size ) { | ^ In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/hdf_convenience.c:8: /<>/libsrc/hdf_convenience.c:1373:81: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1373 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); | ^ /<>/libsrc/minc_useful.h:123:34: note: in definition of macro ‘MIN’ 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/hdf_convenience.c:1373:81: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1373 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); | ^ /<>/libsrc/minc_useful.h:123:47: note: in definition of macro ‘MIN’ 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/hdf_convenience.c:1381:38: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1381 | chkdims[i] = chunk_length; | ^~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c:1386:36: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1386 | H5Pset_deflate(prp_id, comp_level); | ^~~~~~~~~~ /<>/libsrc/hdf_convenience.c:1418:42: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 1418 | hdf_set_length(dst_id, varnm, dim->length); | ~~~^~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_varget’: /<>/libsrc/hdf_convenience.c:1534:19: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1534 | fstart[i] = start_ptr[i]; | ^~~~~~~~~ /<>/libsrc/hdf_convenience.c:1535:18: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1535 | count[i] = length_ptr[i]; | ^~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_varputg’: /<>/libsrc/hdf_convenience.c:1633:45: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1633 | mystart = (hsize_t *)calloc(varp->ndims * 7, sizeof(hsize_t)); | ~~~~~~~~~~~~^~~ /<>/libsrc/hdf_convenience.c:1649:25: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1649 | mystart[idim] = start != NULL ? start[idim] : 0; | ^~~~~ /<>/libsrc/hdf_convenience.c:1658:29: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1658 | myedges[idim] = edges[idim]; | ^~~~~ /<>/libsrc/hdf_convenience.c:1682:36: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘ptrdiff_t’ {aka ‘int’} may change the sign of the result [-Wsign-conversion] 1682 | length[idim] = mymap[idim] * myedges[idim]; | ^ /<>/libsrc/hdf_convenience.c:1683:52: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘ptrdiff_t’ {aka ‘int’} may change the sign of the result [-Wsign-conversion] 1683 | stop[idim] = mystart[idim] + myedges[idim] * mystride[idim]; | ^ /<>/libsrc/hdf_convenience.c:1740:23: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘ptrdiff_t’ {aka ‘int’} may change the sign of the result [-Wsign-conversion] 1740 | mystart[idim] += mystride[idim]; | ^~ /<>/libsrc/hdf_convenience.c:1742:29: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1742 | mystart[idim] = start[idim]; | ^~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_vargetg’: /<>/libsrc/hdf_convenience.c:1810:42: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1810 | mystart = (long *)calloc(varp->ndims * 7, sizeof(long)); | ~~~~~~~~~~~~^~~ /<>/libsrc/hdf_convenience.c:1837:46: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1837 | myedges[idim] = varp->dims[idim] - mystart[idim]; | ^ /<>/libsrc/hdf_convenience.c:1837:29: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘long int’ may change value [-Wconversion] 1837 | myedges[idim] = varp->dims[idim] - mystart[idim]; | ^~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_varput’: /<>/libsrc/hdf_convenience.c:1957:19: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1957 | fstart[i] = start_ptr[i]; | ^~~~~~~~~ /<>/libsrc/hdf_convenience.c:1958:18: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1958 | count[i] = length_ptr[i]; | ^~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_varsize’: /<>/libsrc/hdf_convenience.c:2069:23: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘long int’ may change value [-Wconversion] 2069 | size_ptr[i] = dims[i]; | ^~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_copy_attr’: /<>/libsrc/hdf_convenience.c:2103:26: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2103 | if ((val_ptr = malloc(hdf_size(spc_id, typ_id))) == NULL) | ^~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_open’: /<>/libsrc/hdf_convenience.c:2223:117: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2223 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c:2239:33: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2239 | file_id = H5Fopen(path, mode, fpid); | ^~~~ /<>/libsrc/hdf_convenience.c:2249:25: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2249 | file->wr_ok = (mode & H5F_ACC_RDWR) != 0; | ^ /<>/libsrc/hdf_convenience.c:2271:37: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2271 | dims[ndims++] = H5Tget_nmembers(type_id); | ^~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_create’: /<>/libsrc/hdf_convenience.c:2331:117: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2331 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c:2347:35: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2347 | file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ [ 13%] Building C object CMakeFiles/minc2.dir/libsrc/minc_compat.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -MF CMakeFiles/minc2.dir/libsrc/minc_compat.c.o.d -o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -c /<>/libsrc/minc_compat.c /<>/libsrc/minc_compat.c: In function ‘MI2attcopy’: /<>/libsrc/minc_compat.c:307:51: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 307 | val_ptr = malloc(MI2typelen(att_type) * att_length); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 13%] Building C object CMakeFiles/minc2.dir/libsrc/minc_simple.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -MF CMakeFiles/minc2.dir/libsrc/minc_simple.c.o.d -o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -c /<>/libsrc/minc_simple.c /<>/libsrc/minc_simple.c: In function ‘minc_load_data’: /<>/libsrc/minc_simple.c:393:27: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 393 | ucount[j++] = dim_len[i]; | ^~~~~~~ /<>/libsrc/minc_simple.c:397:23: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), | ^~~~~~~~~ In file included from /<>/libsrc/minc.h:172, from /<>/libsrc/minc_private.h:83, from /<>/libsrc/minc_simple.c:38: /<>/libsrc/minc_compat.h:67:19: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 67 | #define nctypelen MI2typelen /<>/libsrc/minc_simple.c:397:51: note: in expansion of macro ‘nctypelen’ 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), | ^~~~~~~~~ /<>/libsrc/minc_simple.c:416:77: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 416 | p_file->file_atts = (struct att_info *) malloc(sizeof (struct att_info) * | ^ /<>/libsrc/minc_simple.c:419:77: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 419 | p_file->file_vars = (struct var_info *) malloc(sizeof (struct var_info) * | ^ /<>/libsrc/minc_simple.c:431:48: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 431 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/minc_simple.c:446:51: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 446 | p_var->var_atts = malloc(p_var->var_natts * | ^ /<>/libsrc/minc_simple.c:462:52: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 462 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 14%] Building C object CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -MF CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o.d -o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -c /<>/libsrc/minc_format_convert.c [ 14%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o -c /<>/volume_io/Geometry/colour.c [ 15%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -c /<>/volume_io/Geometry/colour_def.c [ 15%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o -c /<>/volume_io/Geometry/gaussian.c [ 16%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o -c /<>/volume_io/Geometry/inverse.c [ 16%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o -c /<>/volume_io/Geometry/newton.c [ 16%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o -c /<>/volume_io/Geometry/points.c [ 17%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o -c /<>/volume_io/Geometry/splines.c [ 17%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o -c /<>/volume_io/Geometry/tensors.c [ 18%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o -c /<>/volume_io/Geometry/transforms.c [ 18%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /<>/volume_io/MNI_formats/gen_xf_io.c /<>/volume_io/MNI_formats/gen_xf_io.c: In function ‘output_one_transform’: /<>/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 184 | volume_filename = alloc_string( string_length(prefix_filename) + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 185 | 100 ); | ~~~ [ 19%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -c /<>/volume_io/MNI_formats/gen_xfs.c [ 19%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -c /<>/volume_io/MNI_formats/grid_transforms.c [ 20%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -c /<>/volume_io/MNI_formats/mni_io.c [ 20%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -c /<>/volume_io/MNI_formats/tag_points.c [ 20%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /<>/volume_io/MNI_formats/thin_plate_spline.c [ 21%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -c /<>/volume_io/Prog_utils/alloc.c /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_in_bytes’: /<>/volume_io/Prog_utils/alloc.c:247:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 247 | print_error( "Cannot alloc 1D array of %lu bytes.\n", n_bytes ); | ~~^ ~~~~~~~ | | | | | size_t {aka unsigned int} | long unsigned int | %u /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_1d’: /<>/volume_io/Prog_utils/alloc.c:286:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 286 | print_error( "Cannot alloc 1D array of %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 287 | n_elements, type_size ); | ~~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:286:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 286 | print_error( "Cannot alloc 1D array of %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 287 | n_elements, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_2d’: /<>/volume_io/Prog_utils/alloc.c:329:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 329 | print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 330 | n1, n2, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:329:57: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 329 | print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 330 | n1, n2, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:329:73: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 329 | print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 330 | n1, n2, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_3d’: /<>/volume_io/Prog_utils/alloc.c:377:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 377 | print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 378 | n1, n2, n3, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:377:57: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 377 | print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 378 | n1, n2, n3, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:377:64: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 377 | print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 378 | n1, n2, n3, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:377:80: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 377 | print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 378 | n1, n2, n3, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_4d’: /<>/volume_io/Prog_utils/alloc.c:430:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:430:57: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:430:64: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:430:71: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:430:87: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_5d’: /<>/volume_io/Prog_utils/alloc.c:486:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:57: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:64: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:71: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:78: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:94: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘realloc_memory’: /<>/volume_io/Prog_utils/alloc.c:544:46: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 544 | print_error( "Error reallocing %lu elements of size %lu.\n", | ~~^ | | | long unsigned int | %u 545 | n_elements, type_size ); | ~~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:544:67: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 544 | print_error( "Error reallocing %lu elements of size %lu.\n", | ~~^ | | | long unsigned int | %u 545 | n_elements, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:558:76: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 558 | print_error("Error: tried to realloc invalid number of elements, %lu.\n", | ~~^ | | | long unsigned int | %u 559 | n_elements ); | ~~~~~~~~~~ | | | size_t {aka unsigned int} [ 21%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o -c /<>/volume_io/Prog_utils/alloc_check.c [ 22%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o -c /<>/volume_io/Prog_utils/arrays.c [ 22%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -c /<>/volume_io/Prog_utils/files.c /<>/volume_io/Prog_utils/files.c: In function ‘extract_directory’: /<>/volume_io/Prog_utils/files.c:1249:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1249 | directory = alloc_string( slash_index ); | ^~~~~~~~~~~ /<>/volume_io/Prog_utils/files.c: In function ‘input_binary_data’: /<>/volume_io/Prog_utils/files.c:1746:58: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 1746 | print_error( " (%d out of %d items of size %ld). ", n_done, n, | ~~^ | | | long int | %d 1747 | element_size ); | ~~~~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/files.c: In function ‘output_binary_data’: /<>/volume_io/Prog_utils/files.c:1786:58: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 1786 | print_error( " (%d out of %d items of size %ld). ", n_done, n, | ~~^ | | | long int | %d 1787 | element_size ); | ~~~~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/files.c: In function ‘io_quoted_string’: /<>/volume_io/Prog_utils/files.c:2445:34: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2445 | *str = alloc_string( length ); | ^~~~~~ [ 23%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -c /<>/volume_io/Prog_utils/print.c [ 23%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -c /<>/volume_io/Prog_utils/progress.c [ 24%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -c /<>/volume_io/Prog_utils/string.c /<>/volume_io/Prog_utils/string.c: In function ‘create_string’: /<>/volume_io/Prog_utils/string.c:40:25: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 40 | str = alloc_string( string_length(initial) ); | ^~~~~~~~~~~~~~~~~~~~~~ /<>/volume_io/Prog_utils/string.c: In function ‘strip_outer_blanks’: /<>/volume_io/Prog_utils/string.c:235:63: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 235 | stripped = alloc_string( last_non_blank - first_non_blank + 1 ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ [ 24%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -c /<>/volume_io/Prog_utils/time.c [ 24%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -c /<>/volume_io/Volumes/evaluate.c /<>/volume_io/Volumes/evaluate.c: In function ‘trilinear_interpolate_rgb’: /<>/volume_io/Volumes/evaluate.c:257:24: warning: conversion from ‘VIO_Real’ {aka ‘double’} to ‘unsigned int’ may change value [-Wfloat-conversion] 257 | coefs[c] = outside_value; | ^~~~~~~~~~~~~ /<>/volume_io/Volumes/evaluate.c:305:20: warning: conversion from ‘VIO_Real’ {aka ‘double’} to ‘int’ may change value [-Wfloat-conversion] 305 | out_rgb[i] = c0 + w * dw; | ^~ [ 25%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -c /<>/volume_io/Volumes/get_hyperslab.c [ 25%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -c /<>/volume_io/Volumes/input_free.c [ 26%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -c /<>/volume_io/Volumes/input_mnc.c /<>/volume_io/Volumes/input_mnc.c: In function ‘initialize_minc_input_from_minc_id’: /<>/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 373 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /<>/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 374 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ [ 26%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -c /<>/volume_io/Volumes/input_volume.c [ 27%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -c /<>/volume_io/Volumes/multidim_arrays.c [ 27%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -c /<>/volume_io/Volumes/output_mnc.c /<>/volume_io/Volumes/output_mnc.c: In function ‘add_minc_history’: /<>/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 779 | new_history = alloc_string( old_att_length ); | ^~~~~~~~~~~~~~ [ 28%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -c /<>/volume_io/Volumes/output_volume.c [ 28%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -c /<>/volume_io/Volumes/set_hyperslab.c [ 28%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -c /<>/volume_io/Volumes/volume_cache.c [ 29%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -c /<>/volume_io/Volumes/volumes.c /<>/volume_io/Volumes/volumes.c: In function ‘copy_volume_definition_no_alloc’: /<>/volume_io/Volumes/volumes.c:2630:60: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2630 | VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); | ^ /<>/volume_io/Volumes/volumes.c:2631:60: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2631 | VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]); | ^ /<>/volume_io/Volumes/volumes.c: In function ‘copy_volume_new_type’: /<>/volume_io/Volumes/volumes.c:2819:44: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 2819 | ((signed char *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2823:46: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 2823 | ((unsigned char *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2829:45: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 2829 | ((signed short *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2833:47: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 2833 | ((unsigned short *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2839:43: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 2839 | ((signed int *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2843:45: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 2843 | ((unsigned int *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2847:34: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 2847 | ((float *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c: In function ‘set_volume_irregular_starts’: /<>/volume_io/Volumes/volumes.c:2942:51: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 2942 | volume->irregular_starts[idim] = malloc(count * sizeof (VIO_Real)); | ^ /<>/volume_io/Volumes/volumes.c: In function ‘set_volume_irregular_widths’: /<>/volume_io/Volumes/volumes.c:2975:51: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 2975 | volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); | ^ [ 29%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -c /<>/volume_io/Volumes/input_mnc2.c /<>/volume_io/Volumes/input_mnc2.c: In function ‘initialize_minc_input_from_minc2_id’: /<>/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 144 | miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:145:63: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 145 | miget_dimension_separations(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_step); | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:146:58: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 146 | miget_dimension_starts(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_start); | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:153:32: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘long int’ may change value [-Wconversion] 153 | file->sizes_in_file[d] = dimension_size[d]; | ^~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:179:21: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 179 | slices_count*=dimension_size[d]; | ^~ /<>/volume_io/Volumes/input_mnc2.c:179:23: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 179 | slices_count*=dimension_size[d]; | ^~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:181:38: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 181 | slice_start=(misize_t *)calloc(n_slice_dimensions,sizeof(misize_t)); | ^~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:182:51: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 182 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&volume_max,&volume_min); | ^~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:203:55: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 203 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&slice_max,&slice_min); | ^~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:372:51: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 372 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /<>/volume_io/Volumes/input_mnc2.c:373:51: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 373 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /<>/volume_io/Volumes/input_mnc2.c: In function ‘input_minc2_hyperslab’: /<>/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 707 | used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; | ^~~~ [ 30%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -c /<>/volume_io/Volumes/output_mnc2.c /<>/volume_io/Volumes/output_mnc2.c: In function ‘output_minc2_hyperslab’: /<>/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 875 | long_file_start[file_ind] = (long) file_start[file_ind]; | ^ /<>/volume_io/Volumes/output_mnc2.c:876:37: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 876 | long_file_count[file_ind] = (long) file_count[file_ind]; | ^ /<>/volume_io/Volumes/output_mnc2.c: In function ‘output_the_volume2’: /<>/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1246 | miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); | ~~~~^~~~~~~~~~~~~~~~~~~ [ 30%] Linking C shared library libminc2.so /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -fPIC -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc2.so.5.2.0 -o libminc2.so.5.2.0 CMakeFiles/minc2.dir/libsrc2/convert.c.o CMakeFiles/minc2.dir/libsrc2/datatype.c.o CMakeFiles/minc2.dir/libsrc2/dimension.c.o CMakeFiles/minc2.dir/libsrc2/free.c.o CMakeFiles/minc2.dir/libsrc2/grpattr.c.o CMakeFiles/minc2.dir/libsrc2/hyper.c.o CMakeFiles/minc2.dir/libsrc2/label.c.o CMakeFiles/minc2.dir/libsrc2/m2util.c.o CMakeFiles/minc2.dir/libsrc2/record.c.o CMakeFiles/minc2.dir/libsrc2/slice.c.o CMakeFiles/minc2.dir/libsrc2/valid.c.o CMakeFiles/minc2.dir/libsrc2/volprops.c.o CMakeFiles/minc2.dir/libsrc2/volume.c.o CMakeFiles/minc2.dir/libcommon/minc2_error.c.o CMakeFiles/minc2.dir/libcommon/minc_config.c.o CMakeFiles/minc2.dir/libcommon/minc_error.c.o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o CMakeFiles/minc2.dir/libcommon/restructure.c.o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -Wl,-rpath,/usr/lib/i386-linux-gnu/hdf5/serial: /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lrt -lnetcdf -lm -ldl -lnetcdf -lm -ldl /usr/bin/cmake -E cmake_symlink_library libminc2.so.5.2.0 libminc2.so.5.2.0 libminc2.so make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 30%] Built target minc2 make -f CMakeFiles/minc2_static.dir/build.make CMakeFiles/minc2_static.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/CMakeFiles/minc2_static.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f CMakeFiles/minc2_static.dir/build.make CMakeFiles/minc2_static.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 30%] Building C object CMakeFiles/minc2_static.dir/libsrc2/convert.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/convert.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/convert.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/convert.c.o -c /<>/libsrc2/convert.c /<>/libsrc2/convert.c: In function ‘miconvert_voxel_to_real’: /<>/libsrc2/convert.c:107:39: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 107 | miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); | ^~~~~~~ /<>/libsrc2/convert.c: In function ‘miset_real_value’: /<>/libsrc2/convert.c:256:45: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 256 | miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); | ^~~~~ /<>/libsrc2/convert.c: In function ‘miget_volume_real_range’: /<>/libsrc2/convert.c:528:23: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 528 | buffer = malloc(n * sizeof(double)); | ^ /<>/libsrc2/convert.c:554:23: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 554 | buffer = malloc(n * sizeof(double)); | ^ [ 31%] Building C object CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o -c /<>/libsrc2/datatype.c [ 31%] Building C object CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o -c /<>/libsrc2/dimension.c /<>/libsrc2/dimension.c: In function ‘micopy_dimension’: /<>/libsrc2/dimension.c:99:61: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 99 | handle->offsets = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/libsrc2/dimension.c:135:60: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 135 | handle->widths = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/libsrc2/dimension.c: In function ‘micreate_dimension’: /<>/libsrc2/dimension.c:288:51: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 288 | handle->widths = ( double * ) malloc ( length * sizeof ( double ) ); | ~~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/libsrc2/dimension.c: In function ‘miget_volume_dimensions’: /<>/libsrc2/dimension.c:417:20: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 417 | number_of_dims = volume->number_of_dims; | ^~~~~~ /<>/libsrc2/dimension.c:422:16: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 422 | max_dims = array_length; | ^~~~~~~~~~~~ /<>/libsrc2/dimension.c: In function ‘miset_apparent_dimension_order’: /<>/libsrc2/dimension.c:486:69: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 486 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); | ^ /<>/libsrc2/dimension.c: In function ‘miset_apparent_dimension_order_by_name’: /<>/libsrc2/dimension.c:580:69: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 580 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); | ^ /<>/libsrc2/dimension.c: In function ‘miget_dimension_offsets’: /<>/libsrc2/dimension.c:1036:43: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 1036 | offsets[j] = dimension->start + ( i * dimension->step ); | ^ /<>/libsrc2/dimension.c: In function ‘miset_dimension_offsets’: /<>/libsrc2/dimension.c:1083:47: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1083 | ( double * ) malloc ( dimension->length * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/libsrc2/dimension.c: In function ‘miset_dimension_sampling_flag’: /<>/libsrc2/dimension.c:1136:21: warning: unsigned conversion from ‘int’ to ‘midimattr_t’ {aka ‘unsigned int’} changes value from ‘-2’ to ‘4294967294’ [-Wsign-conversion] 1136 | dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; | ^~ /<>/libsrc2/dimension.c:1138:21: warning: unsigned conversion from ‘int’ to ‘midimattr_t’ {aka ‘unsigned int’} changes value from ‘-3’ to ‘4294967293’ [-Wsign-conversion] 1138 | dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; | ^~ /<>/libsrc2/dimension.c: In function ‘miget_dimension_start’: /<>/libsrc2/dimension.c:1356:57: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 1356 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /<>/libsrc2/dimension.c:1362:61: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 1362 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /<>/libsrc2/dimension.c:1369:63: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 1369 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /<>/libsrc2/dimension.c: In function ‘miset_dimension_widths’: /<>/libsrc2/dimension.c:1651:65: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1651 | dimension->widths = ( double * ) malloc ( dimension->length * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ [ 32%] Building C object CMakeFiles/minc2_static.dir/libsrc2/free.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/free.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/free.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/free.c.o -c /<>/libsrc2/free.c [ 32%] Building C object CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o -c /<>/libsrc2/grpattr.c /<>/libsrc2/grpattr.c: In function ‘full_path_for_attr’: /<>/libsrc2/grpattr.c:41:24: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 41 | snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", | ^~~~~~ /<>/libsrc2/grpattr.c:48:46: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 48 | strncpy ( fullpath, MI_ROOT_PATH "/" , length ); | ^~~~~~ /<>/libsrc2/grpattr.c:50:58: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 50 | strncpy ( fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length ); | ^~~~~~ /<>/libsrc2/grpattr.c:55:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 55 | strncat(fullpath, "/", length - strlen(fullpath) - 1); | ^ /<>/libsrc2/grpattr.c:58:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 58 | strncat(fullpath, path, length - strlen(fullpath) - 1); | ^ /<>/libsrc2/grpattr.c: In function ‘full_path_for_group’: /<>/libsrc2/grpattr.c:64:52: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 64 | strncpy(fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length); | ^~~~~~ /<>/libsrc2/grpattr.c:67:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 67 | strncat(fullpath, "/", length - strlen(fullpath) - 1); | ^ /<>/libsrc2/grpattr.c:70:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 70 | strncat(fullpath, path, length - strlen(fullpath) - 1); | ^ /<>/libsrc2/grpattr.c: In function ‘milist_recursion’: /<>/libsrc2/grpattr.c:124:22: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 124 | data->frame_ptr->grp_idx ); | ~~~~~~~~~~~~~~~^~~~~~~~~ /<>/libsrc2/grpattr.c:157:58: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 157 | data->frame_ptr->grp_idx - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /<>/libsrc2/grpattr.c: In function ‘milist_attr_op’: /<>/libsrc2/grpattr.c:198:44: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 198 | strncpy ( data->name_ptr, attr_name, data->name_len ); | ~~~~^~~~~~~~~~ /<>/libsrc2/grpattr.c: In function ‘milist_attr_next’: /<>/libsrc2/grpattr.c:223:49: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 223 | strncpy ( path, data->frame_ptr->relpath, maxpath ); | ^~~~~~~ /<>/libsrc2/grpattr.c: In function ‘milist_grp_next’: /<>/libsrc2/grpattr.c:314:49: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 314 | strncpy ( path, data->frame_ptr->relpath, maxpath ); | ^~~~~~~ /<>/libsrc2/grpattr.c:315:48: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 315 | strncpy ( data->frame_ptr->relpath, tmp, maxpath ); | ^~~~~~~ /<>/libsrc2/grpattr.c: In function ‘miget_attr_length’: /<>/libsrc2/grpattr.c:551:15: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 551 | *length = hdf_dims[0]; | ^~~~~~~~ /<>/libsrc2/grpattr.c: In function ‘miset_attr_values’: /<>/libsrc2/grpattr.c:906:31: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 906 | slength = strlen ( path ) - ( pch - path ); | ^ /<>/libsrc2/grpattr.c:910:41: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 910 | std_name[i] = path[pch - path + 1 + i]; | ^ [ 33%] Building C object CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o -c /<>/libsrc2/hyper.c /<>/libsrc2/hyper.c: In function ‘mirw_hyperslab_raw’: /<>/libsrc2/hyper.c:256:21: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 256 | icount[i] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:258:25: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 258 | restructure_array(ndims, buffer, icount, H5Tget_size(type_id), | ^~~~~ /<>/libsrc2/hyper.c:276:42: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 276 | icount[volume->dim_indices[i]] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:286:26: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 286 | temp_buffer=malloc(buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:294:33: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 294 | memcpy(temp_buffer,buffer,buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:296:25: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 296 | restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id), | ^~~~~ /<>/libsrc2/hyper.c: In function ‘mirw_hyperslab_icv’: /<>/libsrc2/hyper.c:433:11: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 433 | ndims = volume->number_of_dims; | ^~~~~~ /<>/libsrc2/hyper.c:445:32: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 445 | mspc_id = H5Screate_simple(ndims, hdf_count, NULL); | ^~~~~ /<>/libsrc2/hyper.c:453:44: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 453 | miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size); | ^~~~~ /<>/libsrc2/hyper.c:496:21: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 496 | slice_ndims = ndims; | ^~~~~ /<>/libsrc2/hyper.c:507:14: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 507 | for (i = slice_ndims; i < ndims; i++ ) { | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:515:57: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 515 | image_slice_max_buffer=malloc(total_number_of_slices*sizeof(double)); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:523:57: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 523 | image_slice_min_buffer=malloc(total_number_of_slices*sizeof(double)); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:661:21: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 661 | icount[i] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:663:25: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 663 | restructure_array(ndims, buffer, icount, H5Tget_size(buffer_type_id),volume->dim_indices, dir); | ^~~~~ /<>/libsrc2/hyper.c:674:42: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 674 | icount[volume->dim_indices[i]] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:677:40: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 677 | imap[volume->dim_indices[i]] = i; | ^ /<>/libsrc2/hyper.c:684:26: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 684 | temp_buffer=malloc(buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:691:33: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 691 | memcpy(temp_buffer,buffer,buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:694:27: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 694 | restructure_array(ndims, temp_buffer, icount, H5Tget_size(buffer_type_id), imap, idir); | ^~~~~ /<>/libsrc2/hyper.c: In function ‘mirw_hyperslab_normalized’: /<>/libsrc2/hyper.c:922:11: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 922 | ndims = volume->number_of_dims; | ^~~~~~ In file included from /<>/libcommon/minc2_error.h:38, from /<>/libsrc2/minc2.h:11, from /<>/libsrc2/hyper.c:16: /<>/libsrc2/hyper.c:933:50: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 933 | MI_CHECK_HDF_CALL(mspc_id = H5Screate_simple(ndims, hdf_count, NULL),"H5Screate_simple"); | ^~~~~ /<>/libcommon/minc_error.h:188:42: note: in definition of macro ‘MI_CHECK_HDF_CALL’ 188 | #define MI_CHECK_HDF_CALL(var,call) {if((var)<0) MI_LOG_ERROR(MI2_MSG_HDF5,call);} | ^~~ /<>/libsrc2/hyper.c:940:43: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 940 | miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size); | ^~~~~ /<>/libsrc2/hyper.c:941:43: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 941 | miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size); | ^~~~~ /<>/libsrc2/hyper.c:980:21: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 980 | slice_ndims = ndims; | ^~~~~ /<>/libsrc2/hyper.c:991:14: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 991 | for (i = slice_ndims; i < ndims; i++ ) { | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:999:57: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 999 | image_slice_max_buffer=malloc(total_number_of_slices*sizeof(double)); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:1000:57: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1000 | image_slice_min_buffer=malloc(total_number_of_slices*sizeof(double)); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:1052:31: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1052 | temp_buffer=(double*)malloc(buffer_size); | ^~~~~~~~~~~ /<>/libsrc2/hyper.c:1103:22: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1103 | icount[i] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:1105:25: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1105 | restructure_array(ndims, buffer, icount, H5Tget_size(buffer_type_id),volume->dim_indices, dir); | ^~~~~ /<>/libsrc2/hyper.c:1116:42: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1116 | icount[volume->dim_indices[i]] = count[i]; | ^~~~~ /<>/libsrc2/hyper.c:1119:40: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 1119 | imap[volume->dim_indices[i]] = i; | ^ /<>/libsrc2/hyper.c:1125:25: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1125 | temp_buffer2=malloc(input_buffer_size); | ^~~~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:1132:32: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1132 | memcpy(temp_buffer2,buffer,input_buffer_size); | ^~~~~~~~~~~~~~~~~ /<>/libsrc2/hyper.c:1135:25: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1135 | restructure_array(ndims, temp_buffer2, icount, H5Tget_size(buffer_type_id), imap, idir); | ^~~~~ [ 33%] Building C object CMakeFiles/minc2_static.dir/libsrc2/label.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/label.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/label.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/label.c.o -c /<>/libsrc2/label.c /<>/libsrc2/label.c: In function ‘miswap4’: /<>/libsrc2/label.c:40:12: warning: conversion to ‘int’ from ‘unsigned int’ may change the sign of the result [-Wsign-conversion] 40 | return (tmp); | ^ /<>/libsrc2/label.c: In function ‘miget_label_value_by_index’: /<>/libsrc2/label.c:199:51: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 199 | result = H5Tget_member_value(volume->mtype_id,idx,value); | ^~~ [ 33%] Building C object CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o -c /<>/libsrc2/m2util.c /<>/libsrc2/m2util.c: In function ‘midownsample_slice’: /<>/libsrc2/m2util.c:1491:18: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1491 | x1 = x; | ^ /<>/libsrc2/m2util.c:1492:26: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1492 | y1 = y + ( j * scale ); | ^ /<>/libsrc2/m2util.c:1492:20: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1492 | y1 = y + ( j * scale ); | ^ /<>/libsrc2/m2util.c:1492:18: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1492 | y1 = y + ( j * scale ); | ^ /<>/libsrc2/m2util.c:1493:26: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1493 | z1 = z + ( k * scale ); | ^ /<>/libsrc2/m2util.c:1493:20: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1493 | z1 = z + ( k * scale ); | ^ /<>/libsrc2/m2util.c:1493:18: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1493 | z1 = z + ( k * scale ); | ^ /<>/libsrc2/m2util.c: In function ‘miconvert_hyperslab_to_real’: /<>/libsrc2/m2util.c:1602:46: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1602 | r = miget_slice_range ( volume, pos, volume->number_of_dims, | ~~~~~~^~~~~~~~~~~~~~~~ /<>/libsrc2/m2util.c:1627:52: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1627 | r = miget_slice_range ( volume, pos, volume->number_of_dims, | ~~~~~~^~~~~~~~~~~~~~~~ /<>/libsrc2/m2util.c: In function ‘minc_update_thumbnail’: /<>/libsrc2/m2util.c:1719:25: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1719 | osize[i] = isize[i] / scale; | ^ /<>/libsrc2/m2util.c:1779:20: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); | ^ /<>/libsrc2/m2util.c:1779:14: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); | ^~~~~ /<>/libsrc2/m2util.c:1782:15: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1782 | out_bytes = osize[1] * osize[2] * sizeof ( double ); | ^~~~~ /<>/libsrc2/m2util.c:1785:14: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1785 | count[0] = scale; | ^~~~~ /<>/libsrc2/m2util.c:1800:22: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1800 | start[0] = slice * scale; | ^ /<>/libsrc2/m2util.c:1803:16: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1803 | count[0] = scale; | ^~~~~ /<>/libsrc2/m2util.c: In function ‘alloc1d’: /<>/libsrc2/m2util.c:1914:52: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1914 | return ( ( double * ) malloc ( sizeof ( double ) * n ) ); | ^ /<>/libsrc2/m2util.c: In function ‘alloc2d’: /<>/libsrc2/m2util.c:1923:34: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1923 | mat = ( double ** ) malloc ( n * sizeof ( double * ) ); | ^ /<>/libsrc2/m2util.c:1930:38: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1930 | mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); | ^ [ 34%] Building C object CMakeFiles/minc2_static.dir/libsrc2/record.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/record.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/record.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/record.c.o -c /<>/libsrc2/record.c /<>/libsrc2/record.c: In function ‘miget_record_field_name’: /<>/libsrc2/record.c:57:50: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 57 | *name = H5Tget_member_name(volume->ftype_id, index); | ^~~~~ /<>/libsrc2/record.c: In function ‘miset_record_field_name’: /<>/libsrc2/record.c:91:20: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 91 | offset = index * H5Tget_size(ftype_id); | ^ [ 34%] Building C object CMakeFiles/minc2_static.dir/libsrc2/slice.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/slice.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -c /<>/libsrc2/slice.c /<>/libsrc2/slice.c: In function ‘mirw_slice_minmax’: /<>/libsrc2/slice.c:72:11: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 72 | ndims = H5Sget_simple_extent_ndims ( fspc_id ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 35%] Building C object CMakeFiles/minc2_static.dir/libsrc2/valid.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/valid.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -c /<>/libsrc2/valid.c [ 35%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -c /<>/libsrc2/volprops.c /<>/libsrc2/volprops.c: In function ‘miget_volume_props’: /<>/libsrc2/volprops.c:133:60: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 133 | handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); | ^ /<>/libsrc2/volprops.c:139:33: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 139 | handle->edge_lengths[i] = dims[i]; | ^~~~ /<>/libsrc2/volprops.c:151:43: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 151 | fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, | ^ /<>/libsrc2/volprops.c:156:34: warning: conversion to ‘int’ from ‘unsigned int’ may change the sign of the result [-Wsign-conversion] 156 | handle->zlib_level = cd_values[0]; | ^~~~~~~~~ /<>/libsrc2/volprops.c: In function ‘miset_props_blocking’: /<>/libsrc2/volprops.c:432:52: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 432 | props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); | ^ [ 36%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volume.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/volume.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -c /<>/libsrc2/volume.c /<>/libsrc2/volume.c: In function ‘_hdf_open’: /<>/libsrc2/volume.c:120:117: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 120 | H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc2/volume.c:132:24: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 132 | fd = H5Fopen(path, mode, prp_id); | ^~~~ /<>/libsrc2/volume.c: In function ‘_hdf_create’: /<>/libsrc2/volume.c:224:115: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 224 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*100, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc2/volume.c:227:26: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 227 | fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ /<>/libsrc2/volume.c: In function ‘micreate_volume’: /<>/libsrc2/volume.c:634:23: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 634 | hdf_size[i] = create_props->edge_lengths[i]; | ^~~~~~~~~~~~ In file included from /<>/libcommon/minc2_error.h:38, from /<>/libsrc2/minc2.h:11, from /<>/libsrc2/volume.c:32: /<>/libsrc2/volume.c:664:72: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 664 | MI_CHECK_HDF_CALL_RET(stat = H5Pset_deflate(hdf_plist, create_props->zlib_level),"H5Pset_deflate") | ~~~~~~~~~~~~^~~~~~~~~~~~ /<>/libcommon/minc_error.h:189:46: note: in definition of macro ‘MI_CHECK_HDF_CALL_RET’ 189 | #define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);} | ^~~ /<>/libsrc2/volume.c:896:70: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 896 | handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions * | ^ In file included from /<>/libcommon/minc2_error.h:38, from /<>/libsrc2/minc2.h:11, from /<>/libsrc2/volume.c:32: /<>/libsrc2/volume.c:900:63: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 900 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM,number_of_dimensions * sizeof(midimhandle_t)); | ^ /<>/libcommon/minc_error.h:187:75: note: in definition of macro ‘MI_LOG_ERROR’ 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /<>/libsrc2/volume.c:988:73: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 988 | props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int)); | ^ /<>/libsrc2/volume.c: In function ‘_miget_irregular_spacing’: /<>/libsrc2/volume.c:1171:35: warning: conversion from ‘hssize_t’ {aka ‘long long int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1171 | hdim->offsets = malloc(n_points * sizeof(double)); | ~~~~~~~~~^~~~~~~~~~~~~~~~ /<>/libsrc2/volume.c:1195:34: warning: conversion from ‘hssize_t’ {aka ‘long long int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 1195 | hdim->widths = malloc(n_points * sizeof(double)); | ~~~~~~~~~^~~~~~~~~~~~~~~~ /<>/libsrc2/volume.c: In function ‘miopen_volume’: /<>/libsrc2/volume.c:1421:62: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1421 | handle->dim_handles = (midimhandle_t *)malloc(n_dimensions * | ^ In file included from /<>/libcommon/minc2_error.h:38, from /<>/libsrc2/minc2.h:11, from /<>/libsrc2/volume.c:32: /<>/libsrc2/volume.c:1426:56: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1426 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_dimensions * sizeof(midimhandle_t)); | ^ /<>/libcommon/minc_error.h:187:75: note: in definition of macro ‘MI_LOG_ERROR’ 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /<>/libsrc2/volume.c:1509:59: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1509 | hid_t tmp_id = H5Tget_member_type(handle->ftype_id, i); | ^ /<>/libsrc2/volume.c:1510:63: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1510 | size_t tmp_off = H5Tget_member_offset(handle->ftype_id, i); | ^ /<>/libsrc2/volume.c:1511:59: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1511 | char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); | ^ In file included from /<>/libsrc2/volume.c:33: /<>/libsrc2/minc2_private.h:14:22: warning: ‘%s’ directive writing up to 127 bytes into a region of size 107 [-Wformat-overflow=] 14 | #define MI_ROOT_PATH "/minc-2.0" | ^~~~~~~~~~~ /<>/libsrc2/volume.c:1216:17: note: in expansion of macro ‘MI_ROOT_PATH’ 1216 | sprintf(path, MI_ROOT_PATH "/dimensions/%s", dimname); | ^~~~~~~~~~~~ /<>/libsrc2/volume.c:1749:53: note: format string is defined here 1749 | miset_attribute(volume, MI_ROOT_PATH "/image/0/image", "valid_range", | ^~ In file included from /usr/i686-linux-gnu/include/stdio.h:866, from /usr/include/hdf5/serial/H5Epublic.h:20, from /usr/include/hdf5/serial/hdf5.h:26, from /<>/libsrc2/volume.c:8: /usr/i686-linux-gnu/include/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 22 and 149 bytes into a destination of size 128 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 36%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -MF CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -c /<>/libcommon/minc2_error.c [ 36%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -MF CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -c /<>/libcommon/minc_config.c /<>/libcommon/minc_config.c: In function ‘miread_cfg’: /<>/libcommon/minc_config.c:84:42: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 84 | strncpy(buffer, tmp, maxlen); | ^~~~~~ [ 37%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -MF CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -c /<>/libcommon/minc_error.c [ 37%] Building C object CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o -MF CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o -c /<>/libcommon/ParseArgv.c /<>/libcommon/ParseArgv.c: In function ‘PrintUsage’: /<>/libcommon/ParseArgv.c:439:32: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 439 | numSpaces = width + 1 - strlen(infoPtr->key); | ^ /<>/libcommon/ParseArgv.c:439:22: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 439 | numSpaces = width + 1 - strlen(infoPtr->key); | ^~~~~ [ 38%] Building C object CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o -MF CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o -c /<>/libcommon/read_file_names.c /<>/libcommon/read_file_names.c: In function ‘read_file_names’: /<>/libcommon/read_file_names.c:53:34: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 53 | files = malloc(sizeof(*files) * array_size); | ^ /<>/libcommon/read_file_names.c:76:48: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 76 | files = realloc(files, sizeof(*files) * array_size); | ^ [ 38%] Building C object CMakeFiles/minc2_static.dir/libcommon/restructure.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/restructure.c.o -MF CMakeFiles/minc2_static.dir/libcommon/restructure.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/restructure.c.o -c /<>/libcommon/restructure.c /<>/libcommon/restructure.c: In function ‘restructure_array’: /<>/libcommon/restructure.c:134:21: warning: unsigned conversion from ‘int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘-1’ to ‘4294967295’ [-Wsign-conversion] 134 | offset_next = -1; /* Initialize. */ | ^ [ 39%] Building C object CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o -MF CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o -c /<>/libcommon/time_stamp.c [ 39%] Building C object CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o -MF CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o -c /<>/libsrc/dim_conversion.c In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/dim_conversion.c:93: /<>/libsrc/dim_conversion.c: In function ‘MI_icv_dimconvert’: /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:161:37: note: in expansion of macro ‘ROUND’ 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:166:35: note: in expansion of macro ‘ROUND’ 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:175:38: note: in expansion of macro ‘ROUND’ 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:180:36: note: in expansion of macro ‘ROUND’ 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:189:36: note: in expansion of macro ‘ROUND’ 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:194:34: note: in expansion of macro ‘ROUND’ 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:123:23: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/minc_basic.h:200:26: note: in expansion of macro ‘MIN’ 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /<>/libsrc/dim_conversion.c:726:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:161:37: note: in expansion of macro ‘ROUND’ 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:166:35: note: in expansion of macro ‘ROUND’ 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:175:38: note: in expansion of macro ‘ROUND’ 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:180:36: note: in expansion of macro ‘ROUND’ 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:189:36: note: in expansion of macro ‘ROUND’ 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:194:34: note: in expansion of macro ‘ROUND’ 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:123:23: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/minc_basic.h:200:26: note: in expansion of macro ‘MIN’ 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /<>/libsrc/dim_conversion.c:734:17: note: in expansion of macro ‘MI_FROM_DOUBLE’ 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ [ 40%] Building C object CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -MF CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -c /<>/libsrc/image_conversion.c /<>/libsrc/image_conversion.c: In function ‘miicv_setdbl’: /<>/libsrc/image_conversion.c:399:29: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 399 | icvp->user_do_range = value; | ^~~~~ /<>/libsrc/image_conversion.c:408:28: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 408 | icvp->user_do_norm = value; | ^~~~~ /<>/libsrc/image_conversion.c:411:30: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 411 | icvp->user_user_norm = value; | ^~~~~ /<>/libsrc/image_conversion.c:420:33: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 420 | icvp->user_do_fillvalue = value; | ^~~~~ /<>/libsrc/image_conversion.c:426:31: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 426 | icvp->user_do_dimconv = value; | ^~~~~ /<>/libsrc/image_conversion.c:429:30: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 429 | icvp->user_do_scalar = value; | ^~~~~ /<>/libsrc/image_conversion.c:432:14: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 432 | ival = value; | ^~~~~ /<>/libsrc/image_conversion.c:437:14: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 437 | ival = value; | ^~~~~ /<>/libsrc/image_conversion.c:442:14: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 442 | ival = value; | ^~~~~ /<>/libsrc/image_conversion.c:447:14: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 447 | ival = value; | ^~~~~ /<>/libsrc/image_conversion.c:455:32: warning: conversion from ‘double’ to ‘long int’ may change value [-Wfloat-conversion] 455 | icvp->user_dim_size[0] = value; | ^~~~~ /<>/libsrc/image_conversion.c:458:32: warning: conversion from ‘double’ to ‘long int’ may change value [-Wfloat-conversion] 458 | icvp->user_dim_size[1] = value; | ^~~~~ /<>/libsrc/image_conversion.c:461:32: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 461 | icvp->user_keep_aspect = value; | ^~~~~ /<>/libsrc/image_conversion.c:475:38: warning: conversion from ‘double’ to ‘long int’ may change value [-Wfloat-conversion] 475 | icvp->user_dim_size[idim] = value; | ^~~~~ /<>/libsrc/image_conversion.c: In function ‘miicv_inqint’: /<>/libsrc/image_conversion.c:774:13: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 774 | *value = dvalue; | ^~~~~~ /<>/libsrc/image_conversion.c: In function ‘miicv_inqlong’: /<>/libsrc/image_conversion.c:803:13: warning: conversion from ‘double’ to ‘long int’ may change value [-Wfloat-conversion] 803 | *value = dvalue; | ^~~~~~ In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/image_conversion.c:173: /<>/libsrc/image_conversion.c: In function ‘MI_icv_zero_buffer’: /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:161:37: note: in expansion of macro ‘ROUND’ 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:166:35: note: in expansion of macro ‘ROUND’ 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:175:38: note: in expansion of macro ‘ROUND’ 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:180:36: note: in expansion of macro ‘ROUND’ 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:189:36: note: in expansion of macro ‘ROUND’ 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:194:34: note: in expansion of macro ‘ROUND’ 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:123:23: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/minc_basic.h:200:26: note: in expansion of macro ‘MIN’ 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /<>/libsrc/image_conversion.c:1490:5: note: in expansion of macro ‘MI_FROM_DOUBLE’ 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ [ 40%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o -MF CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o -c /<>/libsrc/minc_convenience.c /<>/libsrc/minc_convenience.c: In function ‘miset_valid_range’: /<>/libsrc/minc_convenience.c:430:17: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 430 | fval[0] = valid_range[0]; | ^~~~~~~~~~~ /<>/libsrc/minc_convenience.c:431:17: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 431 | fval[1] = valid_range[1]; | ^~~~~~~~~~~ /<>/libsrc/minc_convenience.c: In function ‘miattput_pointer’: /<>/libsrc/minc_convenience.c:638:10: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 638 | index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX)); | ^~~~~~ In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/minc_convenience.c:152: /<>/libsrc/minc_convenience.c: In function ‘miadd_child’: /<>/libsrc/minc_convenience.c:743:56: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 743 | if ((child_list = MALLOC(child_list_size+MAX_NC_NAME+ | ^ /<>/libsrc/minc_useful.h:138:39: note: in definition of macro ‘MALLOC’ 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) | ^~~~~~~ In file included from /<>/libsrc/minc_private.h:89, from /<>/libsrc/minc_convenience.c:152: /<>/libsrc/minc_convenience.c:746:49: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 746 | child_list_size+MAX_NC_NAME+strlen(MI_CHILD_SEPARATOR)); | ^ /<>/libcommon/minc_error.h:187:75: note: in definition of macro ‘MI_LOG_ERROR’ 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /<>/libsrc/minc_convenience.c:765:23: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 765 | child_list_size += strlen(MI_CHILD_SEPARATOR); | ^~ /<>/libsrc/minc_convenience.c:765:26: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 765 | child_list_size += strlen(MI_CHILD_SEPARATOR); | ^~~~~~ /<>/libsrc/minc_convenience.c:780:23: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); | ^~ /<>/libsrc/minc_convenience.c:780:26: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); | ^~~~~~ /<>/libsrc/minc_convenience.c: In function ‘miappend_history’: /<>/libsrc/minc_convenience.c:1378:30: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1378 | att_val = malloc(att_len + strlen(tm_stamp) + 2); | ^ [ 40%] Building C object CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -MF CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -c /<>/libsrc/nd_loop.c [ 41%] Building C object CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -MF CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -c /<>/libsrc/netcdf_convenience.c In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/netcdf_convenience.c:182: /<>/libsrc/netcdf_convenience.c: In function ‘miexpand_file’: /<>/libsrc/netcdf_convenience.c:380:38: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 380 | compfile = MALLOC(strlen(path) + max_compression_code_length + 2, char); | ^ /<>/libsrc/minc_useful.h:138:39: note: in definition of macro ‘MALLOC’ 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) | ^~~~~~~ /<>/libsrc/netcdf_convenience.c: In function ‘miattputstr’: /<>/libsrc/netcdf_convenience.c:1033:38: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 1033 | strlen(value) + 1, value); | ~~~~~~~~~~~~~~^~~ [ 41%] Building C object CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -MF CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -c /<>/libsrc/value_conversion.c /<>/libsrc/value_conversion.c: In function ‘MI_convert_type’: /<>/libsrc/value_conversion.c:622:49: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 622 | (size_t) number_of_values*inincr); | ^ In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/value_conversion.c:98: /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:161:37: note: in expansion of macro ‘ROUND’ 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:166:35: note: in expansion of macro ‘ROUND’ 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:175:38: note: in expansion of macro ‘ROUND’ 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:180:36: note: in expansion of macro ‘ROUND’ 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:189:36: note: in expansion of macro ‘ROUND’ 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:115:20: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /<>/libsrc/minc_basic.h:194:34: note: in expansion of macro ‘ROUND’ 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /<>/libsrc/minc_useful.h:123:23: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/minc_basic.h:200:26: note: in expansion of macro ‘MIN’ 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /<>/libsrc/value_conversion.c:645:11: note: in expansion of macro ‘MI_FROM_DOUBLE’ 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ [ 42%] Building C object CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o -MF CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o -c /<>/libsrc/voxel_loop.c /<>/libsrc/voxel_loop.c: In function ‘update_history’: /<>/libsrc/voxel_loop.c:1182:15: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1182 | att_length += strlen(arg_string) + 1; | ^~ /<>/libsrc/voxel_loop.c:1182:18: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 1182 | att_length += strlen(arg_string) + 1; | ^~~~~~ [ 42%] Building C object CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -MF CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -c /<>/libsrc/hdf_convenience.c /<>/libsrc/hdf_convenience.c: In function ‘hdf_var_add’: /<>/libsrc/hdf_convenience.c:202:59: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 202 | new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims); | ^ In file included from /<>/libsrc/minc_private.h:89, from /<>/libsrc/hdf_convenience.c:8: /<>/libsrc/hdf_convenience.c:209:59: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 209 | MI_LOG_ERROR(MI_MSG_OUTOFMEM, sizeof(hsize_t) * ndims); | ^ /<>/libcommon/minc_error.h:187:75: note: in definition of macro ‘MI_LOG_ERROR’ 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_size’: /<>/libsrc/hdf_convenience.c:370:20: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 370 | int typ_size = H5Tget_size(typ_id); | ^~~~~~~~~~~ /<>/libsrc/hdf_convenience.c:371:20: warning: conversion from ‘hssize_t’ {aka ‘long long int’} to ‘int’ may change value [-Wconversion] 371 | int spc_size = H5Sget_simple_extent_npoints(spc_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_attname’: /<>/libsrc/hdf_convenience.c:455:38: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 455 | att_id = H5Aopen_idx(loc_id, attnum); | ^~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_attinq’: /<>/libsrc/hdf_convenience.c:578:25: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 578 | *length_ptr = typ_size; | ^~~~~~~~ /<>/libsrc/hdf_convenience.c:581:25: warning: conversion from ‘hssize_t’ {aka ‘long long int’} to ‘int’ may change value [-Wconversion] 581 | *length_ptr = H5Sget_simple_extent_npoints(spc_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_get_dimorder’: /<>/libsrc/hdf_convenience.c:667:14: warning: conversion to ‘int’ from ‘size_t’ {aka ‘unsigned int’} may change the sign of the result [-Wsign-conversion] 667 | length = H5Tget_size(typ_id); | ^~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_dimdef’: /<>/libsrc/hdf_convenience.c:958:49: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 958 | hdf_set_length(var->dset_id, dimnm, length); | ^~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_attput’: /<>/libsrc/hdf_convenience.c:1147:30: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1147 | H5Tset_size(ftyp_id, val_len); | ^~~~~~~ /<>/libsrc/hdf_convenience.c:1185:33: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1185 | hsize_t temp_size = val_len; | ^~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_vardef’: /<>/libsrc/hdf_convenience.c:1322:19: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1322 | dims[i] = length; | ^~~~~~ /<>/libsrc/hdf_convenience.c:1369:60: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1369 | if( MI_MAX_VAR_BUFFER_SIZE > dims[i] * val * unit_size ) { | ^ In file included from /<>/libsrc/minc_private.h:84, from /<>/libsrc/hdf_convenience.c:8: /<>/libsrc/hdf_convenience.c:1373:81: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1373 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); | ^ /<>/libsrc/minc_useful.h:123:34: note: in definition of macro ‘MIN’ 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/hdf_convenience.c:1373:81: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1373 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); | ^ /<>/libsrc/minc_useful.h:123:47: note: in definition of macro ‘MIN’ 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /<>/libsrc/hdf_convenience.c:1381:38: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1381 | chkdims[i] = chunk_length; | ^~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c:1386:36: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 1386 | H5Pset_deflate(prp_id, comp_level); | ^~~~~~~~~~ /<>/libsrc/hdf_convenience.c:1418:42: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 1418 | hdf_set_length(dst_id, varnm, dim->length); | ~~~^~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_varget’: /<>/libsrc/hdf_convenience.c:1534:19: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1534 | fstart[i] = start_ptr[i]; | ^~~~~~~~~ /<>/libsrc/hdf_convenience.c:1535:18: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1535 | count[i] = length_ptr[i]; | ^~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_varputg’: /<>/libsrc/hdf_convenience.c:1633:45: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1633 | mystart = (hsize_t *)calloc(varp->ndims * 7, sizeof(hsize_t)); | ~~~~~~~~~~~~^~~ /<>/libsrc/hdf_convenience.c:1649:25: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1649 | mystart[idim] = start != NULL ? start[idim] : 0; | ^~~~~ /<>/libsrc/hdf_convenience.c:1658:29: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1658 | myedges[idim] = edges[idim]; | ^~~~~ /<>/libsrc/hdf_convenience.c:1682:36: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘ptrdiff_t’ {aka ‘int’} may change the sign of the result [-Wsign-conversion] 1682 | length[idim] = mymap[idim] * myedges[idim]; | ^ /<>/libsrc/hdf_convenience.c:1683:52: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘ptrdiff_t’ {aka ‘int’} may change the sign of the result [-Wsign-conversion] 1683 | stop[idim] = mystart[idim] + myedges[idim] * mystride[idim]; | ^ /<>/libsrc/hdf_convenience.c:1740:23: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘ptrdiff_t’ {aka ‘int’} may change the sign of the result [-Wsign-conversion] 1740 | mystart[idim] += mystride[idim]; | ^~ /<>/libsrc/hdf_convenience.c:1742:29: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1742 | mystart[idim] = start[idim]; | ^~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_vargetg’: /<>/libsrc/hdf_convenience.c:1810:42: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1810 | mystart = (long *)calloc(varp->ndims * 7, sizeof(long)); | ~~~~~~~~~~~~^~~ /<>/libsrc/hdf_convenience.c:1837:46: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1837 | myedges[idim] = varp->dims[idim] - mystart[idim]; | ^ /<>/libsrc/hdf_convenience.c:1837:29: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘long int’ may change value [-Wconversion] 1837 | myedges[idim] = varp->dims[idim] - mystart[idim]; | ^~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_varput’: /<>/libsrc/hdf_convenience.c:1957:19: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1957 | fstart[i] = start_ptr[i]; | ^~~~~~~~~ /<>/libsrc/hdf_convenience.c:1958:18: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 1958 | count[i] = length_ptr[i]; | ^~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_varsize’: /<>/libsrc/hdf_convenience.c:2069:23: warning: conversion from ‘hsize_t’ {aka ‘long long unsigned int’} to ‘long int’ may change value [-Wconversion] 2069 | size_ptr[i] = dims[i]; | ^~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_copy_attr’: /<>/libsrc/hdf_convenience.c:2103:26: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2103 | if ((val_ptr = malloc(hdf_size(spc_id, typ_id))) == NULL) | ^~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_open’: /<>/libsrc/hdf_convenience.c:2223:117: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2223 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c:2239:33: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2239 | file_id = H5Fopen(path, mode, fpid); | ^~~~ /<>/libsrc/hdf_convenience.c:2249:25: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2249 | file->wr_ok = (mode & H5F_ACC_RDWR) != 0; | ^ /<>/libsrc/hdf_convenience.c:2271:37: warning: conversion to ‘hsize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2271 | dims[ndims++] = H5Tget_nmembers(type_id); | ^~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c: In function ‘hdf_create’: /<>/libsrc/hdf_convenience.c:2331:117: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2331 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/hdf_convenience.c:2347:35: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2347 | file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ [ 43%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o -MF CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o -c /<>/libsrc/minc_compat.c /<>/libsrc/minc_compat.c: In function ‘MI2attcopy’: /<>/libsrc/minc_compat.c:307:51: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 307 | val_ptr = malloc(MI2typelen(att_type) * att_length); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 43%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o -MF CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o -c /<>/libsrc/minc_simple.c /<>/libsrc/minc_simple.c: In function ‘minc_load_data’: /<>/libsrc/minc_simple.c:393:27: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 393 | ucount[j++] = dim_len[i]; | ^~~~~~~ /<>/libsrc/minc_simple.c:397:23: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), | ^~~~~~~~~ In file included from /<>/libsrc/minc.h:172, from /<>/libsrc/minc_private.h:83, from /<>/libsrc/minc_simple.c:38: /<>/libsrc/minc_compat.h:67:19: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 67 | #define nctypelen MI2typelen /<>/libsrc/minc_simple.c:397:51: note: in expansion of macro ‘nctypelen’ 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), | ^~~~~~~~~ /<>/libsrc/minc_simple.c:416:77: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 416 | p_file->file_atts = (struct att_info *) malloc(sizeof (struct att_info) * | ^ /<>/libsrc/minc_simple.c:419:77: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 419 | p_file->file_vars = (struct var_info *) malloc(sizeof (struct var_info) * | ^ /<>/libsrc/minc_simple.c:431:48: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 431 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/libsrc/minc_simple.c:446:51: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 446 | p_var->var_atts = malloc(p_var->var_natts * | ^ /<>/libsrc/minc_simple.c:462:52: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 462 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 44%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -MF CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -c /<>/libsrc/minc_format_convert.c [ 44%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o -c /<>/volume_io/Geometry/colour.c [ 44%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -c /<>/volume_io/Geometry/colour_def.c [ 45%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -c /<>/volume_io/Geometry/gaussian.c [ 45%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o -c /<>/volume_io/Geometry/inverse.c [ 46%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o -c /<>/volume_io/Geometry/newton.c [ 46%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -c /<>/volume_io/Geometry/points.c [ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -c /<>/volume_io/Geometry/splines.c [ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -c /<>/volume_io/Geometry/tensors.c [ 48%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o -c /<>/volume_io/Geometry/transforms.c [ 48%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /<>/volume_io/MNI_formats/gen_xf_io.c /<>/volume_io/MNI_formats/gen_xf_io.c: In function ‘output_one_transform’: /<>/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 184 | volume_filename = alloc_string( string_length(prefix_filename) + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 185 | 100 ); | ~~~ [ 48%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o -c /<>/volume_io/MNI_formats/gen_xfs.c [ 49%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o -c /<>/volume_io/MNI_formats/grid_transforms.c [ 49%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -c /<>/volume_io/MNI_formats/mni_io.c [ 50%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -c /<>/volume_io/MNI_formats/tag_points.c [ 50%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /<>/volume_io/MNI_formats/thin_plate_spline.c [ 51%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o -c /<>/volume_io/Prog_utils/alloc.c /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_in_bytes’: /<>/volume_io/Prog_utils/alloc.c:247:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 247 | print_error( "Cannot alloc 1D array of %lu bytes.\n", n_bytes ); | ~~^ ~~~~~~~ | | | | | size_t {aka unsigned int} | long unsigned int | %u /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_1d’: /<>/volume_io/Prog_utils/alloc.c:286:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 286 | print_error( "Cannot alloc 1D array of %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 287 | n_elements, type_size ); | ~~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:286:66: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 286 | print_error( "Cannot alloc 1D array of %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 287 | n_elements, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_2d’: /<>/volume_io/Prog_utils/alloc.c:329:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 329 | print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 330 | n1, n2, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:329:57: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 329 | print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 330 | n1, n2, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:329:73: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 329 | print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 330 | n1, n2, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_3d’: /<>/volume_io/Prog_utils/alloc.c:377:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 377 | print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 378 | n1, n2, n3, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:377:57: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 377 | print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 378 | n1, n2, n3, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:377:64: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 377 | print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 378 | n1, n2, n3, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:377:80: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 377 | print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 378 | n1, n2, n3, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_4d’: /<>/volume_io/Prog_utils/alloc.c:430:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:430:57: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:430:64: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:430:71: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:430:87: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 430 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 431 | n1, n2, n3, n4, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘alloc_memory_5d’: /<>/volume_io/Prog_utils/alloc.c:486:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:57: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:64: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:71: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:78: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:486:94: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 486 | print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ | | | long unsigned int | %u 487 | n1, n2, n3, n4, n5, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c: In function ‘realloc_memory’: /<>/volume_io/Prog_utils/alloc.c:544:46: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 544 | print_error( "Error reallocing %lu elements of size %lu.\n", | ~~^ | | | long unsigned int | %u 545 | n_elements, type_size ); | ~~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:544:67: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 544 | print_error( "Error reallocing %lu elements of size %lu.\n", | ~~^ | | | long unsigned int | %u 545 | n_elements, type_size ); | ~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/alloc.c:558:76: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 558 | print_error("Error: tried to realloc invalid number of elements, %lu.\n", | ~~^ | | | long unsigned int | %u 559 | n_elements ); | ~~~~~~~~~~ | | | size_t {aka unsigned int} [ 51%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -c /<>/volume_io/Prog_utils/alloc_check.c [ 51%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o -c /<>/volume_io/Prog_utils/arrays.c [ 52%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -c /<>/volume_io/Prog_utils/files.c /<>/volume_io/Prog_utils/files.c: In function ‘extract_directory’: /<>/volume_io/Prog_utils/files.c:1249:35: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1249 | directory = alloc_string( slash_index ); | ^~~~~~~~~~~ /<>/volume_io/Prog_utils/files.c: In function ‘input_binary_data’: /<>/volume_io/Prog_utils/files.c:1746:58: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 1746 | print_error( " (%d out of %d items of size %ld). ", n_done, n, | ~~^ | | | long int | %d 1747 | element_size ); | ~~~~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/files.c: In function ‘output_binary_data’: /<>/volume_io/Prog_utils/files.c:1786:58: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 1786 | print_error( " (%d out of %d items of size %ld). ", n_done, n, | ~~^ | | | long int | %d 1787 | element_size ); | ~~~~~~~~~~~~ | | | size_t {aka unsigned int} /<>/volume_io/Prog_utils/files.c: In function ‘io_quoted_string’: /<>/volume_io/Prog_utils/files.c:2445:34: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 2445 | *str = alloc_string( length ); | ^~~~~~ [ 52%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o -c /<>/volume_io/Prog_utils/print.c [ 53%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o -c /<>/volume_io/Prog_utils/progress.c [ 53%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o -c /<>/volume_io/Prog_utils/string.c /<>/volume_io/Prog_utils/string.c: In function ‘create_string’: /<>/volume_io/Prog_utils/string.c:40:25: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 40 | str = alloc_string( string_length(initial) ); | ^~~~~~~~~~~~~~~~~~~~~~ /<>/volume_io/Prog_utils/string.c: In function ‘strip_outer_blanks’: /<>/volume_io/Prog_utils/string.c:235:63: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 235 | stripped = alloc_string( last_non_blank - first_non_blank + 1 ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ [ 54%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -c /<>/volume_io/Prog_utils/time.c [ 54%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -c /<>/volume_io/Volumes/evaluate.c /<>/volume_io/Volumes/evaluate.c: In function ‘trilinear_interpolate_rgb’: /<>/volume_io/Volumes/evaluate.c:257:24: warning: conversion from ‘VIO_Real’ {aka ‘double’} to ‘unsigned int’ may change value [-Wfloat-conversion] 257 | coefs[c] = outside_value; | ^~~~~~~~~~~~~ /<>/volume_io/Volumes/evaluate.c:305:20: warning: conversion from ‘VIO_Real’ {aka ‘double’} to ‘int’ may change value [-Wfloat-conversion] 305 | out_rgb[i] = c0 + w * dw; | ^~ [ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o -c /<>/volume_io/Volumes/get_hyperslab.c [ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -c /<>/volume_io/Volumes/input_free.c [ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -c /<>/volume_io/Volumes/input_mnc.c /<>/volume_io/Volumes/input_mnc.c: In function ‘initialize_minc_input_from_minc_id’: /<>/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 373 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /<>/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 374 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ [ 56%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -c /<>/volume_io/Volumes/input_volume.c [ 56%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -c /<>/volume_io/Volumes/multidim_arrays.c [ 57%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -c /<>/volume_io/Volumes/output_mnc.c /<>/volume_io/Volumes/output_mnc.c: In function ‘add_minc_history’: /<>/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 779 | new_history = alloc_string( old_att_length ); | ^~~~~~~~~~~~~~ [ 57%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -c /<>/volume_io/Volumes/output_volume.c [ 58%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -c /<>/volume_io/Volumes/set_hyperslab.c [ 58%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o -c /<>/volume_io/Volumes/volume_cache.c [ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o -c /<>/volume_io/Volumes/volumes.c /<>/volume_io/Volumes/volumes.c: In function ‘copy_volume_definition_no_alloc’: /<>/volume_io/Volumes/volumes.c:2630:60: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2630 | VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); | ^ /<>/volume_io/Volumes/volumes.c:2631:60: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 2631 | VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]); | ^ /<>/volume_io/Volumes/volumes.c: In function ‘copy_volume_new_type’: /<>/volume_io/Volumes/volumes.c:2819:44: warning: conversion from ‘double’ to ‘signed char’ may change value [-Wfloat-conversion] 2819 | ((signed char *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2823:46: warning: conversion from ‘double’ to ‘unsigned char’ may change value [-Wfloat-conversion] 2823 | ((unsigned char *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2829:45: warning: conversion from ‘double’ to ‘short int’ may change value [-Wfloat-conversion] 2829 | ((signed short *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2833:47: warning: conversion from ‘double’ to ‘short unsigned int’ may change value [-Wfloat-conversion] 2833 | ((unsigned short *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2839:43: warning: conversion from ‘double’ to ‘int’ may change value [-Wfloat-conversion] 2839 | ((signed int *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2843:45: warning: conversion from ‘double’ to ‘unsigned int’ may change value [-Wfloat-conversion] 2843 | ((unsigned int *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c:2847:34: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 2847 | ((float *) dst)[i] = value; | ^~~~~ /<>/volume_io/Volumes/volumes.c: In function ‘set_volume_irregular_starts’: /<>/volume_io/Volumes/volumes.c:2942:51: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 2942 | volume->irregular_starts[idim] = malloc(count * sizeof (VIO_Real)); | ^ /<>/volume_io/Volumes/volumes.c: In function ‘set_volume_irregular_widths’: /<>/volume_io/Volumes/volumes.c:2975:51: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 2975 | volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); | ^ [ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -c /<>/volume_io/Volumes/input_mnc2.c /<>/volume_io/Volumes/input_mnc2.c: In function ‘initialize_minc_input_from_minc2_id’: /<>/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 144 | miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:145:63: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 145 | miget_dimension_separations(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_step); | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:146:58: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 146 | miget_dimension_starts(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_start); | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:153:32: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘long int’ may change value [-Wconversion] 153 | file->sizes_in_file[d] = dimension_size[d]; | ^~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:179:21: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 179 | slices_count*=dimension_size[d]; | ^~ /<>/volume_io/Volumes/input_mnc2.c:179:23: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘int’ may change value [-Wconversion] 179 | slices_count*=dimension_size[d]; | ^~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:181:38: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 181 | slice_start=(misize_t *)calloc(n_slice_dimensions,sizeof(misize_t)); | ^~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:182:51: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 182 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&volume_max,&volume_min); | ^~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:203:55: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 203 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&slice_max,&slice_min); | ^~~~~~~~~~~~~~~~~~ /<>/volume_io/Volumes/input_mnc2.c:372:51: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 372 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /<>/volume_io/Volumes/input_mnc2.c:373:51: warning: conversion to ‘long unsigned int’ from ‘long int’ may change the sign of the result [-Wsign-conversion] 373 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /<>/volume_io/Volumes/input_mnc2.c: In function ‘input_minc2_hyperslab’: /<>/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 707 | used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; | ^~~~ [ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -c /<>/volume_io/Volumes/output_mnc2.c /<>/volume_io/Volumes/output_mnc2.c: In function ‘output_minc2_hyperslab’: /<>/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 875 | long_file_start[file_ind] = (long) file_start[file_ind]; | ^ /<>/volume_io/Volumes/output_mnc2.c:876:37: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘long int’ may change the sign of the result [-Wsign-conversion] 876 | long_file_count[file_ind] = (long) file_count[file_ind]; | ^ /<>/volume_io/Volumes/output_mnc2.c: In function ‘output_the_volume2’: /<>/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 1246 | miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); | ~~~~^~~~~~~~~~~~~~~~~~~ [ 60%] Linking C static library libminc2_static.a /usr/bin/cmake -P CMakeFiles/minc2_static.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2_static.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-ar qc libminc2_static.a CMakeFiles/minc2_static.dir/libsrc2/convert.c.o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o CMakeFiles/minc2_static.dir/libsrc2/free.c.o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o CMakeFiles/minc2_static.dir/libsrc2/label.c.o CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o CMakeFiles/minc2_static.dir/libsrc2/record.c.o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o CMakeFiles/minc2_static.dir/libcommon/restructure.c.o CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o /usr/bin/i686-linux-gnu-ranlib libminc2_static.a make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 60%] Built target minc2_static make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/ezminc /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/ezminc /<>/obj-i686-linux-gnu/ezminc/CMakeFiles/minc_io.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 60%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_rw.cpp.o cd /<>/obj-i686-linux-gnu/ezminc && /usr/bin/i686-linux-gnu-g++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT ezminc/CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -MF CMakeFiles/minc_io.dir/minc_1_rw.cpp.o.d -o CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -c /<>/ezminc/minc_1_rw.cpp [ 61%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o cd /<>/obj-i686-linux-gnu/ezminc && /usr/bin/i686-linux-gnu-g++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT ezminc/CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -MF CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o.d -o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -c /<>/ezminc/minc_1_simple_rw.cpp [ 61%] Linking CXX shared library libminc_io.so cd /<>/obj-i686-linux-gnu/ezminc && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_io.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc_io.so.5.2.0 -o libminc_io.so.5.2.0 CMakeFiles/minc_io.dir/minc_1_rw.cpp.o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial: ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf cd /<>/obj-i686-linux-gnu/ezminc && /usr/bin/cmake -E cmake_symlink_library libminc_io.so.5.2.0 libminc_io.so.5.2.0 libminc_io.so make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 61%] Built target minc_io make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/ezminc/examples /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/ezminc/examples /<>/obj-i686-linux-gnu/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 62%] Building CXX object ezminc/examples/CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o cd /<>/obj-i686-linux-gnu/ezminc/examples && /usr/bin/i686-linux-gnu-g++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT ezminc/examples/CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -MF CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o.d -o CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -c /<>/ezminc/examples/trilinear_resample.cpp /<>/ezminc/examples/trilinear_resample.cpp: In function ‘int main(int, char**)’: /<>/ezminc/examples/trilinear_resample.cpp:90:48: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 90 | old_step[i-1]=new_info[rdr.map_space(i)].step; /<>/ezminc/examples/trilinear_resample.cpp:91:49: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 91 | old_start[i-1]=new_info[rdr.map_space(i)].start; /<>/ezminc/examples/trilinear_resample.cpp:93:45: warning: conversion from ‘size_t’ {aka ‘unsigned int’} to ‘float’ may change value [-Wconversion] 93 | float len=(new_info[rdr.map_space(i)].length)*old_step[i-1]; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /<>/ezminc/examples/trilinear_resample.cpp:98:49: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 98 | new_start[i-1]=new_info[rdr.map_space(i)].start; /<>/ezminc/examples/trilinear_resample.cpp:100:58: warning: conversion from ‘double’ to ‘size_t’ {aka ‘unsigned int’} may change value [-Wfloat-conversion] 100 | new_len[i-1]=new_info[rdr.map_space(i)].length=ceil(fabs(len/_step)); | ~~~~^~~~~~~~~~~~~~~~~ /<>/ezminc/examples/trilinear_resample.cpp:109:51: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); | ~^~~~~~ /<>/ezminc/examples/trilinear_resample.cpp:109:59: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); | ~^~~~~~ /<>/ezminc/examples/trilinear_resample.cpp:109:67: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); | ~^~~~~~ /<>/ezminc/examples/trilinear_resample.cpp:115:53: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 115 | output_vol.set(x,y,z,input_vol.interpolate(cc[0],cc[1],cc[2])); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ In file included from /<>/ezminc/minc_1_simple_rw.h:19, from /<>/ezminc/examples/trilinear_resample.cpp:18: /<>/ezminc/minc_io_simple_volume.h: In instantiation of ‘double minc::simple_volume::interpolate(float, float, float) const [with T = float]’: /<>/ezminc/examples/trilinear_resample.cpp:115:53: required from here /<>/ezminc/minc_io_simple_volume.h:327:23: warning: conversion from ‘float’ to ‘size_t’ {aka ‘unsigned int’} may change value [-Wfloat-conversion] 327 | size_t x=floor(_x); | ~~~~~^~~~ /<>/ezminc/minc_io_simple_volume.h:328:23: warning: conversion from ‘float’ to ‘size_t’ {aka ‘unsigned int’} may change value [-Wfloat-conversion] 328 | size_t y=floor(_y); | ~~~~~^~~~ /<>/ezminc/minc_io_simple_volume.h:329:23: warning: conversion from ‘float’ to ‘size_t’ {aka ‘unsigned int’} may change value [-Wfloat-conversion] 329 | size_t z=floor(_z); | ~~~~~^~~~ /<>/ezminc/minc_io_simple_volume.h:331:21: warning: conversion from ‘size_t’ {aka ‘unsigned int’} to ‘float’ may change value [-Wconversion] 331 | float dx=_x-x; | ^ /<>/ezminc/minc_io_simple_volume.h:332:21: warning: conversion from ‘size_t’ {aka ‘unsigned int’} to ‘float’ may change value [-Wconversion] 332 | float dy=_y-y; | ^ /<>/ezminc/minc_io_simple_volume.h:333:21: warning: conversion from ‘size_t’ {aka ‘unsigned int’} to ‘float’ may change value [-Wconversion] 333 | float dz=_z-z; | ^ [ 62%] Linking CXX executable trilinear_resample cd /<>/obj-i686-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/trilinear_resample.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -o trilinear_resample -Wl,-rpath,/<>/obj-i686-linux-gnu/ezminc:/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 62%] Built target trilinear_resample make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/ezminc/examples /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/ezminc/examples /<>/obj-i686-linux-gnu/ezminc/examples/CMakeFiles/volume_avg.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 62%] Building CXX object ezminc/examples/CMakeFiles/volume_avg.dir/volume_avg.cpp.o cd /<>/obj-i686-linux-gnu/ezminc/examples && /usr/bin/i686-linux-gnu-g++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT ezminc/examples/CMakeFiles/volume_avg.dir/volume_avg.cpp.o -MF CMakeFiles/volume_avg.dir/volume_avg.cpp.o.d -o CMakeFiles/volume_avg.dir/volume_avg.cpp.o -c /<>/ezminc/examples/volume_avg.cpp /<>/ezminc/examples/volume_avg.cpp: In function ‘int main(int, char**)’: /<>/ezminc/examples/volume_avg.cpp:128:47: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 128 | _sd.c_buf()[i]=sqrt(_sd.c_buf()[i]/(argc-1) - _avg.c_buf()[i]*_avg.c_buf()[i] ); | ~~~~~^~~ [ 63%] Linking CXX executable volume_avg cd /<>/obj-i686-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_avg.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_avg.dir/volume_avg.cpp.o -o volume_avg -Wl,-rpath,/<>/obj-i686-linux-gnu/ezminc:/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 63%] Built target volume_avg make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/ezminc/examples /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/ezminc/examples /<>/obj-i686-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 63%] Building CXX object ezminc/examples/CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o cd /<>/obj-i686-linux-gnu/ezminc/examples && /usr/bin/i686-linux-gnu-g++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT ezminc/examples/CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -MF CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o.d -o CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -c /<>/ezminc/examples/volume_msq_dist.cpp [ 64%] Linking CXX executable volume_msq_dist cd /<>/obj-i686-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_msq_dist.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -o volume_msq_dist -Wl,-rpath,/<>/obj-i686-linux-gnu/ezminc:/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 64%] Built target volume_msq_dist make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/ezminc/examples /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/ezminc/examples /<>/obj-i686-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 65%] Building CXX object ezminc/examples/CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o cd /<>/obj-i686-linux-gnu/ezminc/examples && /usr/bin/i686-linux-gnu-g++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT ezminc/examples/CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -MF CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o.d -o CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -c /<>/ezminc/examples/create_grid_file.cpp /<>/ezminc/examples/create_grid_file.cpp: In function ‘int main(int, char**)’: /<>/ezminc/examples/create_grid_file.cpp:115:17: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 115 | def[0]=amp*sin(M_PI*pos[0]/100.0); | ~~~^~~~~~~~~~~~~~~~~~~~~~~ /<>/ezminc/examples/create_grid_file.cpp:116:17: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 116 | def[1]=amp*sin(2*M_PI*pos[1]/100.0); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/ezminc/examples/create_grid_file.cpp:117:17: warning: conversion from ‘double’ to ‘float’ may change value [-Wfloat-conversion] 117 | def[2]=amp*cos(3*M_PI*pos[2]/100.0); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 65%] Linking CXX executable create_grid_file cd /<>/obj-i686-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_file.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -o create_grid_file -Wl,-rpath,/<>/obj-i686-linux-gnu/ezminc:/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 65%] Built target create_grid_file make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/ezminc/tests /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/ezminc/tests /<>/obj-i686-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 66%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o cd /<>/obj-i686-linux-gnu/ezminc/tests && /usr/bin/i686-linux-gnu-g++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT ezminc/tests/CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -MF CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o.d -o CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -c /<>/ezminc/tests/ezminc_rw_test.cpp /<>/ezminc/tests/ezminc_rw_test.cpp: In instantiation of ‘void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]’: /<>/ezminc/tests/ezminc_rw_test.cpp:181:32: required from here /<>/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from ‘double’ to ‘__gnu_cxx::__alloc_traits, unsigned char>::value_type’ {aka ‘unsigned char’} may change value [-Wfloat-conversion] 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; | ^ /<>/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from ‘int’ to ‘__gnu_cxx::__alloc_traits, short int>::value_type’ {aka ‘short int’} may change value [-Wconversion] 59 | short_attr[i]=i; | ^ /<>/ezminc/tests/ezminc_rw_test.cpp: In instantiation of ‘void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]’: /<>/ezminc/tests/ezminc_rw_test.cpp:184:22: required from here /<>/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from ‘double’ to ‘__gnu_cxx::__alloc_traits, int>::value_type’ {aka ‘int’} may change value [-Wfloat-conversion] 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; | ^ /<>/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from ‘int’ to ‘__gnu_cxx::__alloc_traits, short int>::value_type’ {aka ‘short int’} may change value [-Wconversion] 59 | short_attr[i]=i; | ^ /<>/ezminc/tests/ezminc_rw_test.cpp: In instantiation of ‘void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = float; nc_type = int]’: /<>/ezminc/tests/ezminc_rw_test.cpp:187:24: required from here /<>/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from ‘double’ to ‘__gnu_cxx::__alloc_traits, float>::value_type’ {aka ‘float’} may change value [-Wfloat-conversion] 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; | ^ /<>/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from ‘int’ to ‘__gnu_cxx::__alloc_traits, short int>::value_type’ {aka ‘short int’} may change value [-Wconversion] 59 | short_attr[i]=i; | ^ /<>/ezminc/tests/ezminc_rw_test.cpp: In instantiation of ‘void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]’: /<>/ezminc/tests/ezminc_rw_test.cpp:190:25: required from here /<>/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from ‘int’ to ‘__gnu_cxx::__alloc_traits, short int>::value_type’ {aka ‘short int’} may change value [-Wconversion] [ 66%] Linking CXX executable ezminc_rw_test cd /<>/obj-i686-linux-gnu/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -o ezminc_rw_test -Wl,-rpath,/<>/obj-i686-linux-gnu/ezminc:/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 66%] Built target ezminc_rw_test make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/ezminc/tests /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/ezminc/tests /<>/obj-i686-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 66%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o cd /<>/obj-i686-linux-gnu/ezminc/tests && /usr/bin/i686-linux-gnu-g++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -MF CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o.d -o CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -c /<>/ezminc/tests/minc_rw_test2.cpp /<>/ezminc/tests/minc_rw_test2.cpp: In function ‘int main(int, char**)’: /<>/ezminc/tests/minc_rw_test2.cpp:27:25: warning: conversion from ‘size_t’ {aka ‘unsigned int’} to ‘float’ may change value [-Wconversion] 27 | vol(x,y,z)=x+y+z; | ~~~^~ [ 67%] Linking CXX executable ezminc_rw_test2 cd /<>/obj-i686-linux-gnu/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test2.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -o ezminc_rw_test2 -Wl,-rpath,/<>/obj-i686-linux-gnu/ezminc:/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 67%] Built target ezminc_rw_test2 make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc_tst.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 67%] Building C object testdir/CMakeFiles/minc_tst.dir/minc.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc_tst.dir/minc.c.o -MF CMakeFiles/minc_tst.dir/minc.c.o.d -o CMakeFiles/minc_tst.dir/minc.c.o -c /<>/testdir/minc.c [ 68%] Linking C executable minc_tst cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_tst.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_tst.dir/minc.c.o -o minc_tst -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 68%] Built target minc_tst make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/icv.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 68%] Building C object testdir/CMakeFiles/icv.dir/icv.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/icv.dir/icv.c.o -MF CMakeFiles/icv.dir/icv.c.o.d -o CMakeFiles/icv.dir/icv.c.o -c /<>/testdir/icv.c [ 69%] Linking C executable icv cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv.dir/icv.c.o -o icv -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 69%] Built target icv make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/icv_vec.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 70%] Building C object testdir/CMakeFiles/icv_vec.dir/icv_vec.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/icv_vec.dir/icv_vec.c.o -MF CMakeFiles/icv_vec.dir/icv_vec.c.o.d -o CMakeFiles/icv_vec.dir/icv_vec.c.o -c /<>/testdir/icv_vec.c /<>/testdir/icv_vec.c: In function ‘test_icv_vector’: /<>/testdir/icv_vec.c:65:41: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 65 | short int *ivalue = malloc(N_ELEMENTS * sizeof(short int)); | ^ /<>/testdir/icv_vec.c:66:38: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 66 | double *dvalue = malloc(N_ELEMENTS * sizeof(double)); | ^ /<>/testdir/icv_vec.c:41:24: warning: conversion from ‘int’ to ‘short int’ may change value [-Wconversion] 41 | #define TVAL(z,y,x,v) ((z)*1000+(y)*100+(x)*10+(v)) | ^ /<>/testdir/icv_vec.c:126:23: note: in expansion of macro ‘TVAL’ 126 | ivalue[c] = TVAL(i, j, k, v); | ^~~~ [ 70%] Linking C executable icv_vec cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_vec.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_vec.dir/icv_vec.c.o -o icv_vec -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 70%] Built target icv_vec make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/icv_dim1.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 70%] Building C object testdir/CMakeFiles/icv_dim1.dir/icv_dim1.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/icv_dim1.dir/icv_dim1.c.o -MF CMakeFiles/icv_dim1.dir/icv_dim1.c.o.d -o CMakeFiles/icv_dim1.dir/icv_dim1.c.o -c /<>/testdir/icv_dim1.c [ 71%] Linking C executable icv_dim1 cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim1.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim1.dir/icv_dim1.c.o -o icv_dim1 -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 71%] Built target icv_dim1 make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/icv_dim.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 71%] Building C object testdir/CMakeFiles/icv_dim.dir/icv_dim.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/icv_dim.dir/icv_dim.c.o -MF CMakeFiles/icv_dim.dir/icv_dim.c.o.d -o CMakeFiles/icv_dim.dir/icv_dim.c.o -c /<>/testdir/icv_dim.c [ 72%] Linking C executable icv_dim cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim.dir/icv_dim.c.o -o icv_dim -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 72%] Built target icv_dim make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/icv_fillvalue.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 72%] Building C object testdir/CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -MF CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o.d -o CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -c /<>/testdir/icv_fillvalue.c [ 72%] Linking C executable icv_fillvalue cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_fillvalue.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -o icv_fillvalue -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 72%] Built target icv_fillvalue make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/icv_range.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 73%] Building C object testdir/CMakeFiles/icv_range.dir/icv_range.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/icv_range.dir/icv_range.c.o -MF CMakeFiles/icv_range.dir/icv_range.c.o.d -o CMakeFiles/icv_range.dir/icv_range.c.o -c /<>/testdir/icv_range.c [ 73%] Linking C executable icv_range cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_range.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_range.dir/icv_range.c.o -o icv_range -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 73%] Built target icv_range make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 73%] Building C object testdir/CMakeFiles/mincapi.dir/mincapi.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/mincapi.dir/mincapi.c.o -MF CMakeFiles/mincapi.dir/mincapi.c.o.d -o CMakeFiles/mincapi.dir/mincapi.c.o -c /<>/testdir/mincapi.c /<>/testdir/mincapi.c: In function ‘test3’: /<>/testdir/mincapi.c:209:11: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 209 | total *= dims[i].length; | ^~ /<>/testdir/mincapi.c: In function ‘test4’: /<>/testdir/mincapi.c:269:11: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 269 | total *= dims[i].length; | ^~ /<>/testdir/mincapi.c:352:21: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 352 | float tmp = (i * 10000) + (j * 100) + k; | ^ /<>/testdir/mincapi.c: In function ‘test5’: /<>/testdir/mincapi.c:409:9: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 409 | total *= dims[TST_X].length; | ^~ /<>/testdir/mincapi.c:410:9: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 410 | total *= dims[TST_Y].length + YBOOST; | ^~ /<>/testdir/mincapi.c:411:9: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 411 | total *= dims[TST_Z].length + ZBOOST; | ^~ /<>/testdir/mincapi.c: In function ‘test7’: /<>/testdir/mincapi.c:644:11: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 644 | total *= dims[i].length; | ^~ [ 74%] Linking C executable mincapi cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincapi.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/mincapi.dir/mincapi.c.o -o mincapi -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 74%] Built target mincapi make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 74%] Building C object testdir/CMakeFiles/minc_types.dir/minc_types.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc_types.dir/minc_types.c.o -MF CMakeFiles/minc_types.dir/minc_types.c.o.d -o CMakeFiles/minc_types.dir/minc_types.c.o -c /<>/testdir/minc_types.c [ 75%] Linking C executable minc_types cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_types.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_types.dir/minc_types.c.o -o minc_types -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 75%] Built target minc_types make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/test_mconv.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 76%] Building C object testdir/CMakeFiles/test_mconv.dir/test_mconv.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/test_mconv.dir/test_mconv.c.o -MF CMakeFiles/test_mconv.dir/test_mconv.c.o.d -o CMakeFiles/test_mconv.dir/test_mconv.c.o -c /<>/testdir/test_mconv.c [ 76%] Linking C executable test_mconv cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_mconv.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_mconv.dir/test_mconv.c.o -o test_mconv -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 76%] Built target test_mconv make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 76%] Building C object testdir/CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -MF CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o.d -o CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -c /<>/testdir/minc_long_attr.c /<>/testdir/minc_long_attr.c: In function ‘test1’: /<>/testdir/minc_long_attr.c:125:32: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 125 | ip->large_attribute=calloc(ip->attribute_size,sizeof(char)); | ~~^~~~~~~~~~~~~~~~ /<>/testdir/minc_long_attr.c:126:52: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 126 | memset(ip->large_attribute,'X',ip->attribute_size-1); | ~~~~~~~~~~~~~~~~~~^~ /<>/testdir/minc_long_attr.c: In function ‘test3’: /<>/testdir/minc_long_attr.c:207:11: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 207 | total *= dims[i].length; | ^~ /<>/testdir/minc_long_attr.c:257:14: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 257 | att=malloc(att_length); | ^~~~~~~~~~ /<>/testdir/minc_long_attr.c:262:37: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 262 | if(memcmp(att,ip->large_attribute,att_length)!=0) | ^~~~~~~~~~ [ 77%] Linking C executable minc_long_attr cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_long_attr.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -o minc_long_attr -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 77%] Built target minc_long_attr make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 77%] Building C object testdir/CMakeFiles/minc_conversion.dir/minc_conversion.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc_conversion.dir/minc_conversion.c.o -MF CMakeFiles/minc_conversion.dir/minc_conversion.c.o.d -o CMakeFiles/minc_conversion.dir/minc_conversion.c.o -c /<>/testdir/minc_conversion.c /<>/testdir/minc_conversion.c: In function ‘test2’: /<>/testdir/minc_conversion.c:156:24: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 156 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /<>/testdir/minc_conversion.c:156:41: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 156 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /<>/testdir/minc_conversion.c:156:51: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 156 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /<>/testdir/minc_conversion.c: In function ‘test3’: /<>/testdir/minc_conversion.c:192:11: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 192 | total *= dims[i].length; | ^~ /<>/testdir/minc_conversion.c:263:24: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 263 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /<>/testdir/minc_conversion.c:263:41: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 263 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /<>/testdir/minc_conversion.c:263:51: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 263 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /<>/testdir/minc_conversion.c: In function ‘test4’: /<>/testdir/minc_conversion.c:351:62: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 351 | buffer=flt_ptr=malloc(sizeof(float)*my_sizes[0]*my_sizes[1]*my_sizes[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc_conversion.c:368:21: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘float’ may change value [-Wconversion] 368 | float tmp = (i * 10000) + (j * 100) + k; | ^ [ 78%] Linking C executable minc_conversion cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_conversion.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_conversion.dir/minc_conversion.c.o -o minc_conversion -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 78%] Built target minc_conversion make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 78%] Building C object testdir/CMakeFiles/volume_test.dir/volume_test.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/volume_test.dir/volume_test.c.o -MF CMakeFiles/volume_test.dir/volume_test.c.o.d -o CMakeFiles/volume_test.dir/volume_test.c.o -c /<>/testdir/volume_test.c [ 79%] Linking C executable volume_test cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_test.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_test.dir/volume_test.c.o -o volume_test -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 79%] Built target volume_test make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/multidim_test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 79%] Building C object testdir/CMakeFiles/multidim_test.dir/multidim_test.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/multidim_test.dir/multidim_test.c.o -MF CMakeFiles/multidim_test.dir/multidim_test.c.o.d -o CMakeFiles/multidim_test.dir/multidim_test.c.o -c /<>/testdir/multidim_test.c [ 79%] Linking C executable multidim_test cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/multidim_test.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/multidim_test.dir/multidim_test.c.o -o multidim_test -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 79%] Built target multidim_test make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 80%] Building C object testdir/CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -MF CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o.d -o CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -c /<>/testdir/vio_xfm_test/test-xfm.c [ 80%] Linking C executable test_xfm cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_xfm.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -o test_xfm -Wl,-rpath,/usr/lib/i386-linux-gnu/hdf5/serial:/<>/obj-i686-linux-gnu /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf -lm -ldl -lm -ldl -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 80%] Built target test_xfm make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/copy_xfm.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 80%] Building C object testdir/CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -MF CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o.d -o CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -c /<>/testdir/vio_xfm_test/copy-xfm.c [ 80%] Linking C executable copy_xfm cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/copy_xfm.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -o copy_xfm -Wl,-rpath,/usr/lib/i386-linux-gnu/hdf5/serial:/<>/obj-i686-linux-gnu /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf -lm -ldl -lm -ldl -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 80%] Built target copy_xfm make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 81%] Building C object testdir/CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -MF CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o.d -o CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -c /<>/testdir/create_grid_xfm.c [ 81%] Linking C executable create_grid_xfm cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_xfm.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -o create_grid_xfm -Wl,-rpath,/usr/lib/i386-linux-gnu/hdf5/serial:/<>/obj-i686-linux-gnu /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf -lm -ldl -lm -ldl -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 81%] Built target create_grid_xfm make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 81%] Building C object testdir/CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -MF CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o.d -o CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -c /<>/testdir/vio_xfm_test/verify_xfm.c [ 82%] Linking C executable verify_xfm cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/verify_xfm.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -o verify_xfm -Wl,-rpath,/usr/lib/i386-linux-gnu/hdf5/serial:/<>/obj-i686-linux-gnu /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf -lm -ldl -lm -ldl -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 82%] Built target verify_xfm make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 83%] Building C object testdir/CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -MF CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o.d -o CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -c /<>/testdir/test_arg_parse.c [ 83%] Linking C executable test_arg_parse cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_arg_parse.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -o test_arg_parse -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 83%] Built target test_arg_parse make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-convert-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 84%] Building C object testdir/CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -MF CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o.d -o CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -c /<>/testdir/minc2-convert-test.c /<>/testdir/minc2-convert-test.c: In function ‘main’: /<>/testdir/minc2-convert-test.c:97:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 97 | coords[0] = i; | ^ /<>/testdir/minc2-convert-test.c:98:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 98 | coords[1] = j; | ^ /<>/testdir/minc2-convert-test.c:99:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 99 | coords[2] = k; | ^ /<>/testdir/minc2-convert-test.c:101:28: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 101 | voxel[0] = coords[0]; | ^~~~~~ /<>/testdir/minc2-convert-test.c:102:28: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 102 | voxel[1] = coords[1]; | ^~~~~~ /<>/testdir/minc2-convert-test.c:103:28: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 103 | voxel[2] = coords[2]; | ^~~~~~ [ 84%] Linking C executable minc2-convert-test cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-convert-test.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -o minc2-convert-test -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 84%] Built target minc2-convert-test make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 84%] Building C object testdir/CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -MF CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o.d -o CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -c /<>/testdir/minc2-create-test-images-2.c /<>/testdir/minc2-create-test-images-2.c: In function ‘create_real_as_int_image’: /<>/testdir/minc2-create-test-images-2.c:78:16: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 78 | start[0] = i; | ^ /<>/testdir/minc2-create-test-images-2.c: In function ‘create_real_as_float_image’: /<>/testdir/minc2-create-test-images-2.c:143:17: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 143 | buf[i] = i * 0.001f; | ^ /<>/testdir/minc2-create-test-images-2.c:154:16: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 154 | start[0] = i; | ^ [ 85%] Linking C executable minc2-create-test-images-2 cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images-2.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -o minc2-create-test-images-2 -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 85%] Built target minc2-create-test-images-2 make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 85%] Building C object testdir/CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -MF CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o.d -o CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -c /<>/testdir/minc2-create-test-images.c /<>/testdir/minc2-create-test-images.c: In function ‘create_3D_image’: /<>/testdir/minc2-create-test-images.c:137:16: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 137 | start[0] = i; | ^ /<>/testdir/minc2-create-test-images.c: In function ‘create_4D_image’: /<>/testdir/minc2-create-test-images.c:210:16: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 210 | start[0] = i; | ^ /<>/testdir/minc2-create-test-images.c:212:18: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 212 | start[1] = j; | ^ [ 86%] Linking C executable minc2-create-test-images cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -o minc2-create-test-images -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 86%] Built target minc2-create-test-images make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 86%] Building C object testdir/CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -MF CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o.d -o CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -c /<>/testdir/minc2-datatype-test.c [ 87%] Linking C executable minc2-datatype-test cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-datatype-test.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -o minc2-datatype-test -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 87%] Built target minc2-datatype-test make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 88%] Building C object testdir/CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -MF CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o.d -o CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -c /<>/testdir/minc2-large-attribute.c /<>/testdir/minc2-large-attribute.c: In function ‘create_3D_image’: /<>/testdir/minc2-large-attribute.c:84:16: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 84 | start[0] = i; | ^ /<>/testdir/minc2-large-attribute.c:90:20: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 90 | attribute=malloc(attribute_size); | ^~~~~~~~~~~~~~ /<>/testdir/minc2-large-attribute.c:91:38: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 91 | memset(attribute,'Z',attribute_size-1); | ~~~~~~~~~~~~~~^~ /<>/testdir/minc2-large-attribute.c:94:55: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 94 | miset_attr_values(hvol,MI_TYPE_STRING,"test","test",attribute_size,attribute); | ^~~~~~~~~~~~~~ [ 88%] Linking C executable minc2-large-attribute cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-large-attribute.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -o minc2-large-attribute -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 88%] Built target minc2-large-attribute make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 88%] Building C object testdir/CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -MF CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o.d -o CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -c /<>/testdir/minc2-full-test.c /<>/testdir/minc2-full-test.c: In function ‘test1’: /<>/testdir/minc2-full-test.c:111:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 111 | coords[0] = i; | ^ /<>/testdir/minc2-full-test.c:112:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 112 | coords[1] = j; | ^ /<>/testdir/minc2-full-test.c:113:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 113 | coords[2] = k; | ^ /<>/testdir/minc2-full-test.c: In function ‘test2’: /<>/testdir/minc2-full-test.c:227:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 227 | coords[0] = i; | ^ /<>/testdir/minc2-full-test.c:228:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 228 | coords[1] = j; | ^ /<>/testdir/minc2-full-test.c:229:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 229 | coords[2] = k; | ^ /<>/testdir/minc2-full-test.c:231:30: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 231 | fcmpl.real = (i * 100) + j; | ^ /<>/testdir/minc2-full-test.c:232:30: warning: conversion from ‘int’ to ‘float’ may change value [-Wconversion] 232 | fcmpl.imag = k; | ^ /<>/testdir/minc2-full-test.c:249:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 249 | coords[0] = i; | ^ /<>/testdir/minc2-full-test.c:250:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 250 | coords[1] = j; | ^ /<>/testdir/minc2-full-test.c:251:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 251 | coords[2] = k; | ^ [ 89%] Linking C executable minc2-full-test cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-full-test.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -o minc2-full-test -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 89%] Built target minc2-full-test make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 89%] Building C object testdir/CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -MF CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o.d -o CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -c /<>/testdir/minc2-grpattr-test.c [ 89%] Linking C executable minc2-grpattr-test cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-grpattr-test.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -o minc2-grpattr-test -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 89%] Built target minc2-grpattr-test make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 90%] Building C object testdir/CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -MF CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o.d -o CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -c /<>/testdir/minc2-hyper-test-2.c /<>/testdir/minc2-hyper-test-2.c: In function ‘create_test_file’: /<>/testdir/minc2-hyper-test-2.c:72:16: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 72 | start[0] = i; | ^ /<>/testdir/minc2-hyper-test-2.c: In function ‘main’: /<>/testdir/minc2-hyper-test-2.c:145:65: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 145 | buffer = ( double * ) malloc ( count[0] * count[1] * count[2] * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ [ 90%] Linking C executable minc2-hyper-test-2 cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test-2.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -o minc2-hyper-test-2 -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 90%] Built target minc2-hyper-test-2 make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 91%] Building C object testdir/CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -MF CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o.d -o CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -c /<>/testdir/minc2-hyper-test.c /<>/testdir/minc2-hyper-test.c: In function ‘create_and_test_image’: /<>/testdir/minc2-hyper-test.c:89:26: warning: conversion to ‘short unsigned int’ from ‘short int’ may change the sign of the result [-Wsign-conversion] 89 | stmp2[i][j][k] = (short)((i*XP)+(j*YP)+(k*ZP)); | ^ /<>/testdir/minc2-hyper-test.c:261:20: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 261 | start[0] = i; | ^ /<>/testdir/minc2-hyper-test.c:262:20: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 262 | start[1] = j; | ^ /<>/testdir/minc2-hyper-test.c:263:20: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 263 | start[2] = k; | ^ /<>/testdir/minc2-hyper-test.c: In function ‘test1’: /<>/testdir/minc2-hyper-test.c:393:31: warning: conversion to ‘short int’ from ‘short unsigned int’ may change the sign of the result [-Wsign-conversion] 393 | short t = stemp[i][j][k]; | ^~~~~ /<>/testdir/minc2-hyper-test.c:418:31: warning: conversion to ‘short int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 418 | short t = stemp[i][j][k] ^ 0x5555; | ^~~~~ /<>/testdir/minc2-hyper-test.c:424:38: warning: conversion to ‘short unsigned int’ from ‘short int’ may change the sign of the result [-Wsign-conversion] 424 | stemp[i][j][k] = t; | ^ /<>/testdir/minc2-hyper-test.c:458:31: warning: conversion to ‘short int’ from ‘short unsigned int’ may change the sign of the result [-Wsign-conversion] 458 | short t = stmp2[i][j][k]; | ^~~~~ /<>/testdir/minc2-hyper-test.c: In function ‘test3’: /<>/testdir/minc2-hyper-test.c:814:28: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 814 | start[0] = i; | ^ /<>/testdir/minc2-hyper-test.c:815:28: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 815 | start[1] = j; | ^ /<>/testdir/minc2-hyper-test.c:816:28: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 816 | start[2] = k; | ^ [ 91%] Linking C executable minc2-hyper-test cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -o minc2-hyper-test -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 91%] Built target minc2-hyper-test make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 92%] Building C object testdir/CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -MF CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o.d -o CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -c /<>/testdir/minc2-label-test.c /<>/testdir/minc2-label-test.c: In function ‘create_label_image’: /<>/testdir/minc2-label-test.c:110:21: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 110 | coords[0] = i; | ^ /<>/testdir/minc2-label-test.c:111:21: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 111 | coords[1] = j; | ^ /<>/testdir/minc2-label-test.c:112:21: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 112 | coords[2] = k; | ^ [ 92%] Linking C executable minc2-label-test cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-label-test.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -o minc2-label-test -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 92%] Built target minc2-label-test make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 92%] Building C object testdir/CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -MF CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o.d -o CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -c /<>/testdir/minc2-multires-test.c /<>/testdir/minc2-multires-test.c: In function ‘main’: /<>/testdir/minc2-multires-test.c:79:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 79 | coords[0] = i; | ^ /<>/testdir/minc2-multires-test.c:80:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 80 | coords[1] = j; | ^ /<>/testdir/minc2-multires-test.c:81:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 81 | coords[2] = k; | ^ /<>/testdir/minc2-multires-test.c:83:25: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 83 | voxel = i*10000 + j*100 + k; | ^ [ 93%] Linking C executable minc2-multires-test cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-multires-test.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -o minc2-multires-test -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 93%] Built target minc2-multires-test make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 94%] Building C object testdir/CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -MF CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o.d -o CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -c /<>/testdir/minc2-record-test.c /<>/testdir/minc2-record-test.c: In function ‘main’: /<>/testdir/minc2-record-test.c:85:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 85 | coords[0] = i; | ^ /<>/testdir/minc2-record-test.c:86:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 86 | coords[1] = j; | ^ /<>/testdir/minc2-record-test.c:87:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 87 | coords[2] = k; | ^ /<>/testdir/minc2-record-test.c:105:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 105 | coords[0] = i; | ^ /<>/testdir/minc2-record-test.c:106:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 106 | coords[1] = j; | ^ /<>/testdir/minc2-record-test.c:107:29: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 107 | coords[2] = k; | ^ [ 94%] Linking C executable minc2-record-test cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-record-test.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -o minc2-record-test -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 94%] Built target minc2-record-test make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-slice-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 95%] Building C object testdir/CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -MF CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o.d -o CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -c /<>/testdir/minc2-slice-test.c /<>/testdir/minc2-slice-test.c: In function ‘main’: /<>/testdir/minc2-slice-test.c:29:21: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 29 | coords[0] = i; /*Z*/ | ^ /<>/testdir/minc2-slice-test.c:30:21: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 30 | coords[1] = rand()%CX; /*X*/ | ^~~~ /<>/testdir/minc2-slice-test.c:31:21: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 31 | coords[2] = rand()%CY; /*Y*/ | ^~~~ [ 95%] Linking C executable minc2-slice-test cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-slice-test.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -o minc2-slice-test -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 95%] Built target minc2-slice-test make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-valid-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 96%] Building C object testdir/CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -MF CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o.d -o CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -c /<>/testdir/minc2-valid-test.c [ 96%] Linking C executable minc2-valid-test cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-valid-test.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -o minc2-valid-test -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 96%] Built target minc2-valid-test make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 97%] Building C object testdir/CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -MF CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o.d -o CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -c /<>/testdir/minc2-vector_dimension-test.c /<>/testdir/minc2-vector_dimension-test.c: In function ‘main’: /<>/testdir/minc2-vector_dimension-test.c:131:17: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 131 | coords[3] = i; | ^ /<>/testdir/minc2-vector_dimension-test.c:166:17: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 166 | coords[0] = i; | ^ [ 97%] Linking C executable minc2-vector_dimension-test cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-vector_dimension-test.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -o minc2-vector_dimension-test -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 97%] Built target minc2-vector_dimension-test make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-volprops-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 97%] Building C object testdir/CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -MF CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o.d -o CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -c /<>/testdir/minc2-volprops-test.c [ 98%] Linking C executable minc2-volprops-test cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-volprops-test.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -o minc2-volprops-test -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 98%] Built target minc2-volprops-test make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-read-rgb.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 98%] Building C object testdir/CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -MF CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o.d -o CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -c /<>/testdir/minc2-read-rgb.c /<>/testdir/minc2-read-rgb.c: In function ‘calculate_mean_f’: /<>/testdir/minc2-read-rgb.c:23:13: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 23 | return avg/length; | ^ /<>/testdir/minc2-read-rgb.c: In function ‘calculate_mean_s’: /<>/testdir/minc2-read-rgb.c:33:13: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 33 | return avg/length; | ^ /<>/testdir/minc2-read-rgb.c: In function ‘calculate_mean_d’: /<>/testdir/minc2-read-rgb.c:43:13: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘double’ may change value [-Wconversion] 43 | return avg/length; | ^ /<>/testdir/minc2-read-rgb.c: In function ‘main’: /<>/testdir/minc2-read-rgb.c:116:37: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 116 | dim= malloc(sizeof(midimhandle_t)*ndim); | ^ /<>/testdir/minc2-read-rgb.c:117:32: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 117 | sizes=malloc(sizeof(misize_t)*ndim); | ^ /<>/testdir/minc2-read-rgb.c:118:31: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 118 | origin=malloc(sizeof(double)*ndim); | ^ /<>/testdir/minc2-read-rgb.c:119:29: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 119 | step=malloc(sizeof(double)*ndim); | ^ /<>/testdir/minc2-read-rgb.c:129:36: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 129 | r = miget_dimension_sizes ( dim, ndim, sizes ); | ^~~~ /<>/testdir/minc2-read-rgb.c:134:53: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 134 | r = miget_dimension_separations(dim,MI_ORDER_FILE,ndim,step); | ^~~~ /<>/testdir/minc2-read-rgb.c:197:68: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 197 | f_full=malloc(sizeof(float)*my_sizes[0]*my_sizes[1]*my_sizes[2]*my_sizes[3]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:224:69: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 224 | f_axial=malloc(sizeof(float)*my_count[0]*my_count[1]*my_count[2]*my_count[3]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:238:72: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 238 | f_sagittal=malloc(sizeof(float)*my_count[0]*my_count[1]*my_count[2]*my_count[3]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:250:71: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 250 | f_coronal=malloc(sizeof(float)*my_count[0]*my_count[1]*my_count[2]*my_count[3]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:262:68: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 262 | s_full=malloc(sizeof(short)*my_sizes[0]*my_sizes[1]*my_sizes[2]*my_sizes[3]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:280:69: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 280 | s_axial=malloc(sizeof(short)*my_count[0]*my_count[1]*my_count[2]*my_count[3]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:292:72: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 292 | s_sagittal=malloc(sizeof(short)*my_count[0]*my_count[1]*my_count[2]*my_count[3]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:305:71: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 305 | s_coronal=malloc(sizeof(short)*my_count[0]*my_count[1]*my_count[2]*my_count[3]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:316:69: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 316 | d_full=malloc(sizeof(double)*my_sizes[0]*my_sizes[1]*my_sizes[2]*my_sizes[3]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:366:56: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 366 | f_full=malloc(sizeof(float)*my_sizes[0]*my_sizes[1]*my_sizes[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:384:57: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 384 | f_axial=malloc(sizeof(float)*my_count[0]*my_count[1]*my_count[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:398:60: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 398 | f_sagittal=malloc(sizeof(float)*my_count[0]*my_count[1]*my_count[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:410:59: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 410 | f_coronal=malloc(sizeof(float)*my_count[0]*my_count[1]*my_count[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:429:57: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 429 | s_axial=malloc(sizeof(short)*my_count[0]*my_count[1]*my_count[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:432:56: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 432 | s_full=malloc(sizeof(short)*my_sizes[0]*my_sizes[1]*my_sizes[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:451:60: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 451 | s_sagittal=malloc(sizeof(short)*my_count[0]*my_count[1]*my_count[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:464:59: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 464 | s_coronal=malloc(sizeof(short)*my_count[0]*my_count[1]*my_count[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/testdir/minc2-read-rgb.c:475:57: warning: conversion from ‘misize_t’ {aka ‘long long unsigned int’} to ‘size_t’ {aka ‘unsigned int’} may change value [-Wconversion] 475 | d_full=malloc(sizeof(double)*my_sizes[0]*my_sizes[1]*my_sizes[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 98%] Linking C executable minc2-read-rgb cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-rgb.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -o minc2-read-rgb -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 98%] Built target minc2-read-rgb make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 98%] Building C object testdir/CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -MF CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o.d -o CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -c /<>/testdir/minc2-read-metadata.c [ 99%] Linking C executable minc2-read-metadata cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-metadata.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -o minc2-read-metadata -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [ 99%] Built target minc2-read-metadata make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/testdir /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/testdir /<>/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-leak-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 99%] Building C object testdir/CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/i686-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/<> -I/<>/obj-i686-linux-gnu -I/<>/libcommon -I/<>/libsrc2 -I/<>/libsrc -I/<>/volume_io/Include -I/<>/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -MF CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o.d -o CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -c /<>/testdir/minc2-leak-test.c /<>/testdir/minc2-leak-test.c: In function ‘hdf5_check_objects’: /<>/testdir/minc2-leak-test.c:58:21: warning: conversion to ‘unsigned int’ from ‘ssize_t’ {aka ‘int’} may change the sign of the result [-Wsign-conversion] 58 | objs = malloc(cnt * sizeof(hid_t)); | ^ /<>/testdir/minc2-leak-test.c:60:46: warning: conversion to ‘size_t’ {aka ‘unsigned int’} from ‘ssize_t’ {aka ‘int’} may change the sign of the result [-Wsign-conversion] 60 | howmany = H5Fget_obj_ids(fid, H5F_OBJ_ALL, cnt, objs); | ^~~ /<>/testdir/minc2-leak-test.c: In function ‘leak_loop’: /<>/testdir/minc2-leak-test.c:113:40: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 113 | buffer = (double *) malloc( n_voxels * sizeof(double)); | ^ /<>/testdir/minc2-leak-test.c: In function ‘create_test_image’: /<>/testdir/minc2-leak-test.c:235:41: warning: conversion to ‘unsigned int’ from ‘int’ may change the sign of the result [-Wsign-conversion] 235 | buf = ( uint16_t * ) malloc ( nvoxels * sizeof ( uint16_t ) ); | ^ /<>/testdir/minc2-leak-test.c:253:16: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 253 | start[0] = i; | ^ /<>/testdir/minc2-leak-test.c: In function ‘main’: /<>/testdir/minc2-leak-test.c:306:46: warning: conversion to ‘misize_t’ {aka ‘long long unsigned int’} from ‘int’ may change the sign of the result [-Wsign-conversion] 306 | result = miget_dimension_sizes(dimensions, ndims, sizes); | ^~~~~ [100%] Linking C executable minc2-leak-test cd /<>/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-leak-test.dir/link.txt --verbose=1 /usr/bin/i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -o minc2-leak-test -Wl,-rpath,/<>/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lz -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/<>/obj-i686-linux-gnu' [100%] Built target minc2-leak-test make[2]: Leaving directory '/<>/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/obj-i686-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/<>/obj-i686-linux-gnu' create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install -a cd obj-i686-linux-gnu && make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/obj-i686-linux-gnu' /usr/bin/cmake -S/<> -B/<>/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/obj-i686-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/obj-i686-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /<>/debian/tmp/usr/lib/i386-linux-gnu/libminc2.so.5.2.0 -- Set runtime path of "/<>/debian/tmp/usr/lib/i386-linux-gnu/libminc2.so.5.2.0" to "" -- Installing: /<>/debian/tmp/usr/lib/i386-linux-gnu/libminc2.so -- Installing: /<>/debian/tmp/usr/include/minc2.h -- Installing: /<>/debian/tmp/usr/include/minc2_defs.h -- Installing: /<>/debian/tmp/usr/include/minc2_structs.h -- Installing: /<>/debian/tmp/usr/include/minc2_api.h -- Installing: /<>/debian/tmp/usr/include/minc2_error.h -- Installing: /<>/debian/tmp/usr/include/minc_config.h -- Installing: /<>/debian/tmp/usr/include/minc_error.h -- Installing: /<>/debian/tmp/usr/include/ParseArgv.h -- Installing: /<>/debian/tmp/usr/include/read_file_names.h -- Installing: /<>/debian/tmp/usr/include/restructure.h -- Installing: /<>/debian/tmp/usr/include/time_stamp.h -- Installing: /<>/debian/tmp/usr/include/minc_common_defs.h -- Installing: /<>/debian/tmp/usr/include/volume_io.h -- Installing: /<>/debian/tmp/usr/include/minc.h -- Installing: /<>/debian/tmp/usr/include/voxel_loop.h -- Installing: /<>/debian/tmp/usr/include/nd_loop.h -- Installing: /<>/debian/tmp/usr/include/minc_compat.h -- Installing: /<>/debian/tmp/usr/include/minc_simple.h -- Installing: /<>/debian/tmp/usr/include/minc_format_convert.h -- Installing: /<>/debian/tmp/usr/include/volume_io/alloc.h -- Installing: /<>/debian/tmp/usr/include/volume_io/arrays.h -- Installing: /<>/debian/tmp/usr/include/volume_io/basic.h -- Installing: /<>/debian/tmp/usr/include/volume_io/def_math.h -- Installing: /<>/debian/tmp/usr/include/volume_io/files.h -- Installing: /<>/debian/tmp/usr/include/volume_io/geom_structs.h -- Installing: /<>/debian/tmp/usr/include/volume_io/geometry.h -- Installing: /<>/debian/tmp/usr/include/volume_io/multidim.h -- Installing: /<>/debian/tmp/usr/include/volume_io/progress.h -- Installing: /<>/debian/tmp/usr/include/volume_io/string_funcs.h -- Installing: /<>/debian/tmp/usr/include/volume_io/system_dependent.h -- Installing: /<>/debian/tmp/usr/include/volume_io/transforms.h -- Installing: /<>/debian/tmp/usr/include/volume_io/vol_io_prototypes.h -- Installing: /<>/debian/tmp/usr/include/volume_io/volume.h -- Installing: /<>/debian/tmp/usr/include/volume_io/volume_cache.h -- Installing: /<>/debian/tmp/usr/lib/i386-linux-gnu/cmake/UseLIBMINC.cmake -- Installing: /<>/debian/tmp/usr/lib/i386-linux-gnu/cmake/LIBMINCConfig.cmake -- Installing: /<>/debian/tmp/usr/lib/i386-linux-gnu/libminc_io.so.5.2.0 -- Set runtime path of "/<>/debian/tmp/usr/lib/i386-linux-gnu/libminc_io.so.5.2.0" to "" -- Installing: /<>/debian/tmp/usr/lib/i386-linux-gnu/libminc_io.so -- Installing: /<>/debian/tmp/usr/include/minc_io_exceptions.h -- Installing: /<>/debian/tmp/usr/include/minc_io_fixed_vector.h -- Installing: /<>/debian/tmp/usr/include/minc_io_simple_volume.h -- Installing: /<>/debian/tmp/usr/include/minc_1_rw.h -- Installing: /<>/debian/tmp/usr/include/minc_1_simple.h -- Installing: /<>/debian/tmp/usr/include/minc_1_simple_rw.h -- Installing: /<>/debian/tmp/usr/include/minc_io_4d_volume.h make[1]: Leaving directory '/<>/obj-i686-linux-gnu' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dwz: debian/libminc2-5.2.0/usr/lib/i386-linux-gnu/libminc2.so.5.2.0: DWARF compression not beneficial - old size 359356 new size 371019 dwz: debian/libminc2-5.2.0/usr/lib/i386-linux-gnu/libminc_io.so.5.2.0: DWARF compression not beneficial - old size 339442 new size 340832 dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'libminc2-5.2.0' in '../libminc2-5.2.0_2.4.03-5_i386.deb'. dpkg-deb: building package 'libminc2-5.2.0-dbgsym' in '../libminc2-5.2.0-dbgsym_2.4.03-5_i386.deb'. dpkg-deb: building package 'libminc-dev' in '../libminc-dev_2.4.03-5_i386.deb'. dpkg-genbuildinfo --build=any -O../libminc_2.4.03-5_i386.buildinfo dpkg-genchanges --build=any -O../libminc_2.4.03-5_i386.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2022-02-13T15:52:43Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libminc_2.4.03-5_i386.changes: ------------------------------ Format: 1.8 Date: Thu, 27 Jan 2022 21:16:56 +0100 Source: libminc Binary: libminc-dev libminc2-5.2.0 libminc2-5.2.0-dbgsym Built-For-Profiles: cross nocheck Architecture: i386 Version: 2.4.03-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: libminc-dev - MNI medical image format development environment libminc2-5.2.0 - MNI medical image format library Changes: libminc (2.4.03-5) unstable; urgency=medium . * Really fix watch file Checksums-Sha1: 1d554444d421fa105f17d55da94316bfffa8c070 73836 libminc-dev_2.4.03-5_i386.deb 4ee626d39ab57f7ef211e4abd34809584da7b4da 596848 libminc2-5.2.0-dbgsym_2.4.03-5_i386.deb a37fe6c9fd36d23866401d765a1870ccfe0576a0 251280 libminc2-5.2.0_2.4.03-5_i386.deb 74a64d0a595ef26def7aaba5263e7cb9f1114aa9 6906 libminc_2.4.03-5_i386.buildinfo Checksums-Sha256: 581e7dcc2f6ed397f9e5b092a682cc7373cdd8b78b8ed7b5f3d89e3b94eb8030 73836 libminc-dev_2.4.03-5_i386.deb fcfee00ae94194c48ad2d4c6d724e43b7c025c10319f1e9d28c7b5e8caf36d5c 596848 libminc2-5.2.0-dbgsym_2.4.03-5_i386.deb b87445a01ee94a77fa9508a77264f2ece73f89918f1501095cf20801fa3b076b 251280 libminc2-5.2.0_2.4.03-5_i386.deb 5a8166cb07093571b73880172b6de35b36909850ff5c8a9b90e5b3832e37ddc6 6906 libminc_2.4.03-5_i386.buildinfo Files: c4bd2a79a9c4848d0c7730e5ffbc3296 73836 libdevel optional libminc-dev_2.4.03-5_i386.deb 8b04b1da815daf48cf17183fa00cc5df 596848 debug optional libminc2-5.2.0-dbgsym_2.4.03-5_i386.deb dc582bcf7b6eb4c3d53581e55064555d 251280 libs optional libminc2-5.2.0_2.4.03-5_i386.deb a140c4ff425330848bcdcda043adfde3 6906 science optional libminc_2.4.03-5_i386.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: libminc Binary: libminc-dev libminc2-5.2.0 libminc2-5.2.0-dbgsym Architecture: i386 Version: 2.4.03-5 Checksums-Md5: c4bd2a79a9c4848d0c7730e5ffbc3296 73836 libminc-dev_2.4.03-5_i386.deb 8b04b1da815daf48cf17183fa00cc5df 596848 libminc2-5.2.0-dbgsym_2.4.03-5_i386.deb dc582bcf7b6eb4c3d53581e55064555d 251280 libminc2-5.2.0_2.4.03-5_i386.deb Checksums-Sha1: 1d554444d421fa105f17d55da94316bfffa8c070 73836 libminc-dev_2.4.03-5_i386.deb 4ee626d39ab57f7ef211e4abd34809584da7b4da 596848 libminc2-5.2.0-dbgsym_2.4.03-5_i386.deb a37fe6c9fd36d23866401d765a1870ccfe0576a0 251280 libminc2-5.2.0_2.4.03-5_i386.deb Checksums-Sha256: 581e7dcc2f6ed397f9e5b092a682cc7373cdd8b78b8ed7b5f3d89e3b94eb8030 73836 libminc-dev_2.4.03-5_i386.deb fcfee00ae94194c48ad2d4c6d724e43b7c025c10319f1e9d28c7b5e8caf36d5c 596848 libminc2-5.2.0-dbgsym_2.4.03-5_i386.deb b87445a01ee94a77fa9508a77264f2ece73f89918f1501095cf20801fa3b076b 251280 libminc2-5.2.0_2.4.03-5_i386.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Sun, 13 Feb 2022 15:52:42 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.71-2), automake (= 1:1.16.5-1.1), autopoint (= 0.21-4), autotools-dev (= 20220109.1), base-files (= 12.2), base-passwd (= 3.5.52), bash (= 5.1-6), binutils (= 2.38-1), binutils-aarch64-linux-gnu (= 2.38-1), binutils-common (= 2.38-1), bsdextrautils (= 2.37.3-1+b1), bsdutils (= 1:2.37.3-1+b1), build-essential (= 12.9), bzip2 (= 1.0.8-5), cmake (= 3.22.1-1+b1), cmake-data (= 3.22.1-1), coreutils (= 8.32-4.1), cpp (= 4:11.2.0-2), cpp-11 (= 11.2.0-16), dash (= 0.5.11+git20210903+057cd650a4ed-3), debconf (= 1.5.79), debhelper (= 13.6), debianutils (= 5.7-0.1), dh-autoreconf (= 20), dh-elpa-helper (= 2.0.10), dh-exec (= 0.23.4), dh-strip-nondeterminism (= 1.13.0-1), diffutils (= 1:3.7-5), dpkg (= 1.21.1), dpkg-dev (= 1.21.1), dwz (= 0.14-1), emacsen-common (= 3.0.4), file (= 1:5.41-2), findutils (= 4.8.0-1), g++ (= 4:11.2.0-2), g++-11 (= 11.2.0-16), gcc (= 4:11.2.0-2), gcc-11 (= 11.2.0-16), gcc-11-base (= 11.2.0-16), gettext (= 0.21-4), gettext-base (= 0.21-4), grep (= 3.7-1), groff-base (= 1.22.4-8), gzip (= 1.10-4), hdf5-helpers (= 1.10.7+repack-4), hostname (= 3.23), init-system-helpers (= 1.61), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.3.1-1), libaec-dev (= 1.0.6-1), libaec0 (= 1.0.6-1), libarchive-zip-perl (= 1.68-1), libarchive13 (= 3.5.2-1), libasan6 (= 11.2.0-16), libatomic1 (= 11.2.0-16), libattr1 (= 1:2.5.1-1), libaudit-common (= 1:3.0.7-1), libaudit1 (= 1:3.0.7-1), libbinutils (= 2.38-1), libblkid1 (= 2.37.3-1+b1), libbrotli1 (= 1.0.9-2+b3), libbz2-1.0 (= 1.0.8-5), libc-bin (= 2.33-5), libc-dev-bin (= 2.33-5), libc6 (= 2.33-5), libc6-dev (= 2.33-5), libcap-ng0 (= 0.7.9-2.2+b1), libcap2 (= 1:2.44-1), libcc1-0 (= 11.2.0-16), libcom-err2 (= 1.46.5-2), libcrypt-dev (= 1:4.4.27-1.1), libcrypt1 (= 1:4.4.27-1.1), libctf-nobfd0 (= 2.38-1), libctf0 (= 2.38-1), libcurl3-gnutls (= 7.81.0-1), libcurl4 (= 7.81.0-1), libcurl4-openssl-dev (= 7.81.0-1), libdb5.3 (= 5.3.28+dfsg1-0.8), libdebconfclient0 (= 0.261), libdebhelper-perl (= 13.6), libdpkg-perl (= 1.21.1), libelf1 (= 0.186-1), libexpat1 (= 2.4.4-1), libffi8 (= 3.4.2-4), libfile-stripnondeterminism-perl (= 1.13.0-1), libgcc-11-dev (= 11.2.0-16), libgcc-s1 (= 11.2.0-16), libgcrypt20 (= 1.9.4-5), libgdbm-compat4 (= 1.23-1), libgdbm6 (= 1.23-1), libgfortran5 (= 11.2.0-16), libgmp10 (= 2:6.2.1+dfsg-3), libgnutls30 (= 3.7.3-4+b1), libgomp1 (= 11.2.0-16), libgpg-error0 (= 1.43-3), libgssapi-krb5-2 (= 1.18.3-7), libhdf5-103-1 (= 1.10.7+repack-4), libhdf5-cpp-103-1 (= 1.10.7+repack-4), libhdf5-dev (= 1.10.7+repack-4), libhdf5-fortran-102 (= 1.10.7+repack-4), libhdf5-hl-100 (= 1.10.7+repack-4), libhdf5-hl-cpp-100 (= 1.10.7+repack-4), libhdf5-hl-fortran-100 (= 1.10.7+repack-4), libhogweed6 (= 3.7.3-1), libhwasan0 (= 11.2.0-16), libicu67 (= 67.1-7), libidn2-0 (= 2.3.2-2), libisl23 (= 0.24-2), libitm1 (= 11.2.0-16), libjpeg-dev (= 1:2.1.2-1), libjpeg62-turbo (= 1:2.1.2-1), libjpeg62-turbo-dev (= 1:2.1.2-1), libjsoncpp25 (= 1.9.5-3), libk5crypto3 (= 1.18.3-7), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.18.3-7), libkrb5support0 (= 1.18.3-7), libldap-2.4-2 (= 2.4.59+dfsg-1+b1), liblsan0 (= 11.2.0-16), liblz4-1 (= 1.9.3-2), liblzma5 (= 5.2.5-2), libmagic-mgc (= 1:5.41-2), libmagic1 (= 1:5.41-2), libmount1 (= 2.37.3-1+b1), libmpc3 (= 1.2.1-1), libmpfr6 (= 4.1.0-3), libncurses6 (= 6.3-2), libncursesw6 (= 6.3-2), libnetcdf-dev (= 1:4.8.1-1), libnetcdf19 (= 1:4.8.1-1), libnettle8 (= 3.7.3-1), libnghttp2-14 (= 1.43.0-1), libnifti2-2 (= 3.0.1-8), libnifti2-dev (= 3.0.1-8), libnifticdf-dev (= 3.0.1-8), libnifticdf2 (= 3.0.1-8), libniftiio-dev (= 3.0.1-8), libniftiio2 (= 3.0.1-8), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libp11-kit0 (= 0.24.0-6), libpam-modules (= 1.4.0-11), libpam-modules-bin (= 1.4.0-11), libpam-runtime (= 1.4.0-11), libpam0g (= 1.4.0-11), libpcre2-8-0 (= 10.39-3), libpcre3 (= 2:8.39-13), libperl5.34 (= 5.34.0-3), libpipeline1 (= 1.5.5-1), libprocps8 (= 2:3.3.17-6), libpsl5 (= 0.21.0-1.2), libquadmath0 (= 11.2.0-16), librhash0 (= 1.4.2-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2), libsasl2-2 (= 2.1.27+dfsg2-3), libsasl2-modules-db (= 2.1.27+dfsg2-3), libseccomp2 (= 2.5.3-2), libselinux1 (= 3.3-1+b1), libsigsegv2 (= 2.14-1), libsmartcols1 (= 2.37.3-1+b1), libssh2-1 (= 1.10.0-2), libssl-dev (= 1.1.1m-1), libssl1.1 (= 1.1.1m-1), libstdc++-11-dev (= 11.2.0-16), libstdc++6 (= 11.2.0-16), libsub-override-perl (= 0.09-2), libsystemd0 (= 250.3-2), libsz2 (= 1.0.6-1), libtasn1-6 (= 4.18.0-4), libtinfo6 (= 6.3-2), libtirpc-common (= 1.3.2-2), libtirpc-dev (= 1.3.2-2), libtirpc3 (= 1.3.2-2), libtool (= 2.4.6-15), libtsan0 (= 11.2.0-16), libubsan1 (= 11.2.0-16), libuchardet0 (= 0.0.7-1), libudev1 (= 250.3-2), libunistring2 (= 1.0-1), libuuid1 (= 2.37.3-1+b1), libuv1 (= 1.43.0-1), libxml2 (= 2.9.12+dfsg-5+b1), libznz-dev (= 3.0.1-8), libznz3 (= 3.0.1-8), libzstd1 (= 1.4.8+dfsg-3), linux-libc-dev (= 5.16.7-2), login (= 1:4.11.1+dfsg1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-5), make (= 4.3-4.1), man-db (= 2.10.1-1), mawk (= 1.3.4.20200120-3), ncurses-base (= 6.3-2), ncurses-bin (= 6.3-2), patch (= 2.7.6-7), perl (= 5.34.0-3), perl-base (= 5.34.0-3), perl-modules-5.34 (= 5.34.0-3), po-debconf (= 1.0.21+nmu1), procps (= 2:3.3.17-6), rpcsvc-proto (= 1.4.2-4), sed (= 4.8-1), sensible-utils (= 0.0.17), sysvinit-utils (= 3.01-1), tar (= 1.34+dfsg-1), util-linux (= 2.37.3-1+b1), xz-utils (= 5.2.5-2), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_GB.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1643314616" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libminc-dev_2.4.03-5_i386.deb ----------------------------- new Debian package, version 2.0. size 73836 bytes: control archive=2224 bytes. 1224 bytes, 28 lines control 3014 bytes, 46 lines md5sums Package: libminc-dev Source: libminc Version: 2.4.03-5 Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 396 Depends: libminc2-5.2.0 (= 2.4.03-5), libnetcdf-dev, libhdf5-dev Conflicts: libminc0-dev Replaces: libminc0-dev Section: libdevel Priority: optional Multi-Arch: same Homepage: https://github.com/BIC-MNI/libminc Description: MNI medical image format development environment This package contains the library and headers for libminc2 and libminc_io. . The Minc file format is a highly flexible medical image file format. Minc version 1 is built on top of the NetCDF generalized data format. Minc version 2 is built on top of the HDF data format. This library handles both formats. In each case the format is simple, self-describing, extensible, portable and N-dimensional, with programming interfaces for both low-level data access and high-level volume manipulation. On top of the libraries is a suite of generic image-file manipulation tools. The format, libraries and tools are designed for use in a medical-imaging research environment : they are simple and powerful and make no attempt to provide a pretty interface to users. drwxr-xr-x root/root 0 2022-01-27 20:16 ./ drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/ drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/include/ -rw-r--r-- root/root 2494 2018-05-19 18:27 ./usr/include/ParseArgv.h -rw-r--r-- root/root 25408 2018-05-19 18:27 ./usr/include/minc.h -rw-r--r-- root/root 257 2018-05-19 18:27 ./usr/include/minc2.h -rw-r--r-- root/root 55236 2018-05-19 18:27 ./usr/include/minc2_api.h -rw-r--r-- root/root 187 2018-05-19 18:27 ./usr/include/minc2_defs.h -rw-r--r-- root/root 1511 2018-05-19 18:27 ./usr/include/minc2_error.h -rw-r--r-- root/root 7139 2018-05-19 18:27 ./usr/include/minc2_structs.h -rw-r--r-- root/root 13997 2018-05-19 18:27 ./usr/include/minc_1_rw.h -rw-r--r-- root/root 7736 2018-05-19 18:27 ./usr/include/minc_1_simple.h -rw-r--r-- root/root 10048 2018-05-19 18:27 ./usr/include/minc_1_simple_rw.h -rw-r--r-- root/root 15111 2018-05-19 18:27 ./usr/include/minc_common_defs.h -rw-r--r-- root/root 2978 2018-05-19 18:27 ./usr/include/minc_compat.h -rw-r--r-- root/root 495 2018-05-19 18:27 ./usr/include/minc_config.h -rw-r--r-- root/root 6095 2018-05-19 18:27 ./usr/include/minc_error.h -rw-r--r-- root/root 988 2018-05-19 18:27 ./usr/include/minc_format_convert.h -rw-r--r-- root/root 3814 2018-05-19 18:27 ./usr/include/minc_io_4d_volume.h -rw-r--r-- root/root 1758 2018-05-19 18:27 ./usr/include/minc_io_exceptions.h -rw-r--r-- root/root 8993 2018-05-19 18:27 ./usr/include/minc_io_fixed_vector.h -rw-r--r-- root/root 16161 2018-05-19 18:27 ./usr/include/minc_io_simple_volume.h -rw-r--r-- root/root 3323 2018-05-19 18:27 ./usr/include/minc_simple.h -rw-r--r-- root/root 2942 2018-05-19 18:27 ./usr/include/nd_loop.h -rw-r--r-- root/root 785 2018-05-19 18:27 ./usr/include/read_file_names.h -rw-r--r-- root/root 531 2018-05-19 18:27 ./usr/include/restructure.h -rw-r--r-- root/root 2122 2018-05-19 18:27 ./usr/include/time_stamp.h -rw-r--r-- root/root 2062 2018-05-19 18:27 ./usr/include/volume_io.h drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/include/volume_io/ -rw-r--r-- root/root 10972 2018-05-19 18:27 ./usr/include/volume_io/alloc.h -rw-r--r-- root/root 6763 2018-05-19 18:27 ./usr/include/volume_io/arrays.h -rw-r--r-- root/root 5006 2018-05-19 18:27 ./usr/include/volume_io/basic.h -rw-r--r-- root/root 1007 2018-05-19 18:27 ./usr/include/volume_io/def_math.h -rw-r--r-- root/root 1617 2018-05-19 18:27 ./usr/include/volume_io/files.h -rw-r--r-- root/root 8342 2018-05-19 18:27 ./usr/include/volume_io/geom_structs.h -rw-r--r-- root/root 8978 2018-05-19 18:27 ./usr/include/volume_io/geometry.h -rw-r--r-- root/root 11723 2018-05-19 18:27 ./usr/include/volume_io/multidim.h -rw-r--r-- root/root 1945 2018-05-19 18:27 ./usr/include/volume_io/progress.h -rw-r--r-- root/root 1761 2018-05-19 18:27 ./usr/include/volume_io/string_funcs.h -rw-r--r-- root/root 1614 2018-05-19 18:27 ./usr/include/volume_io/system_dependent.h -rw-r--r-- root/root 3299 2018-05-19 18:27 ./usr/include/volume_io/transforms.h -rw-r--r-- root/root 56832 2018-05-19 18:27 ./usr/include/volume_io/vol_io_prototypes.h -rw-r--r-- root/root 19145 2018-05-19 18:27 ./usr/include/volume_io/volume.h -rw-r--r-- root/root 3870 2018-05-19 18:27 ./usr/include/volume_io/volume_cache.h -rw-r--r-- root/root 15151 2018-05-19 18:27 ./usr/include/voxel_loop.h drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/lib/ drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/lib/i386-linux-gnu/ drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/lib/i386-linux-gnu/cmake/ drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/lib/i386-linux-gnu/cmake/LIBMINC/ -rw-r--r-- root/root 1533 2022-01-27 20:16 ./usr/lib/i386-linux-gnu/cmake/LIBMINC/LIBMINCConfig.cmake -rw-r--r-- root/root 343 2022-01-27 20:16 ./usr/lib/i386-linux-gnu/cmake/LIBMINC/UseLIBMINC.cmake lrwxrwxrwx root/root 0 2022-01-27 20:16 ./usr/lib/i386-linux-gnu/libminc2.so -> libminc2.so.5.2.0 lrwxrwxrwx root/root 0 2022-01-27 20:16 ./usr/lib/i386-linux-gnu/libminc_io.so -> libminc_io.so.5.2.0 drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/share/ drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/share/doc/libminc-dev/ -rw-r--r-- root/root 5233 2022-01-27 20:16 ./usr/share/doc/libminc-dev/changelog.Debian.gz -rw-r--r-- root/root 13424 2018-05-19 18:27 ./usr/share/doc/libminc-dev/changelog.gz -rw-r--r-- root/root 1085 2022-01-27 20:16 ./usr/share/doc/libminc-dev/copyright libminc2-5.2.0-dbgsym_2.4.03-5_i386.deb --------------------------------------- new Debian package, version 2.0. size 596848 bytes: control archive=660 bytes. 450 bytes, 13 lines control 301 bytes, 3 lines md5sums Package: libminc2-5.2.0-dbgsym Source: libminc Version: 2.4.03-5 Auto-Built-Package: debug-symbols Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 654 Depends: libminc2-5.2.0 (= 2.4.03-5) Section: debug Priority: optional Multi-Arch: same Description: debug symbols for libminc2-5.2.0 Build-Ids: 1944c0ef623dea9bc234c5b93c1d268c3fff4db7 abf1b67aa8a762b2c8b1a5b7866c9135ba404049 drwxr-xr-x root/root 0 2022-01-27 20:16 ./ drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/ drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/lib/ drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/lib/debug/ drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/lib/debug/.build-id/19/ -rw-r--r-- root/root 457740 2022-01-27 20:16 ./usr/lib/debug/.build-id/19/44c0ef623dea9bc234c5b93c1d268c3fff4db7.debug drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/lib/debug/.build-id/ab/ -rw-r--r-- root/root 194008 2022-01-27 20:16 ./usr/lib/debug/.build-id/ab/f1b67aa8a762b2c8b1a5b7866c9135ba404049.debug drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/lib/debug/.dwz/i386-linux-gnu/ -rw-r--r-- root/root 2336 2022-01-27 20:16 ./usr/lib/debug/.dwz/i386-linux-gnu/libminc2-5.2.0.debug drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/share/ drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/share/doc/ lrwxrwxrwx root/root 0 2022-01-27 20:16 ./usr/share/doc/libminc2-5.2.0-dbgsym -> libminc2-5.2.0 libminc2-5.2.0_2.4.03-5_i386.deb -------------------------------- new Debian package, version 2.0. size 251280 bytes: control archive=1208 bytes. 1184 bytes, 25 lines control 384 bytes, 5 lines md5sums 86 bytes, 2 lines shlibs 65 bytes, 2 lines triggers Package: libminc2-5.2.0 Source: libminc Version: 2.4.03-5 Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 689 Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.0), libhdf5-103-1, libnetcdf19 (>= 3.6.1), libstdc++6 (>= 11) Section: libs Priority: optional Multi-Arch: same Homepage: https://github.com/BIC-MNI/libminc Description: MNI medical image format library This package contains the libraries libminc2 and libminc_io. . The Minc file format is a highly flexible medical image file format. Minc version 1 is built on top of the NetCDF generalized data format. Minc version 2 is built on top of the HDF data format. This library handles both formats. In each case the format is simple, self-describing, extensible, portable and N-dimensional, with programming interfaces for both low-level data access and high-level volume manipulation. On top of the libraries is a suite of generic image-file manipulation tools. The format, libraries and tools are designed for use in a medical-imaging research environment : they are simple and powerful and make no attempt to provide a pretty interface to users. drwxr-xr-x root/root 0 2022-01-27 20:16 ./ drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/ drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/lib/ drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/lib/i386-linux-gnu/ -rw-r--r-- root/root 592276 2022-01-27 20:16 ./usr/lib/i386-linux-gnu/libminc2.so.5.2.0 -rw-r--r-- root/root 79260 2022-01-27 20:16 ./usr/lib/i386-linux-gnu/libminc_io.so.5.2.0 drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/share/ drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-01-27 20:16 ./usr/share/doc/libminc2-5.2.0/ -rw-r--r-- root/root 5233 2022-01-27 20:16 ./usr/share/doc/libminc2-5.2.0/changelog.Debian.gz -rw-r--r-- root/root 13424 2018-05-19 18:27 ./usr/share/doc/libminc2-5.2.0/changelog.gz -rw-r--r-- root/root 1085 2022-01-27 20:16 ./usr/share/doc/libminc2-5.2.0/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:arm64 Filtered Build-Depends: lintian:arm64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [564 B] Get:5 copy:/<>/apt_archive ./ Packages [653 B] Fetched 2180 B in 0s (49.3 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-ipv6addr-perl libnet-netmask-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg liblist-someutils-xs-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-ipv6addr-perl libnet-netmask-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common sbuild-build-depends-lintian-dummy:i386 t1utils unzip 0 upgraded, 103 newly installed, 0 to remove and 0 not upgraded. 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sid/main arm64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:52 http://mirror.einval.org/debian sid/main arm64 libfile-basedir-perl all 0.09-1 [16.4 kB] Get:53 http://mirror.einval.org/debian sid/main arm64 libnumber-compare-perl all 0.03-2 [7448 B] Get:54 http://mirror.einval.org/debian sid/main arm64 libtext-glob-perl all 0.11-2 [8992 B] Get:55 http://mirror.einval.org/debian sid/main arm64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:56 http://mirror.einval.org/debian sid/main arm64 libfont-ttf-perl all 1.06-1.1 [318 kB] Get:57 http://mirror.einval.org/debian sid/main arm64 libhtml-html5-entities-perl all 0.004-1.1 [21.3 kB] Get:58 http://mirror.einval.org/debian sid/main arm64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:59 http://mirror.einval.org/debian sid/main arm64 libio-interactive-perl all 1.023-1 [11.5 kB] Get:60 http://mirror.einval.org/debian sid/main arm64 libio-prompt-tiny-perl all 0.003-1 [9150 B] Get:61 http://mirror.einval.org/debian sid/main arm64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:62 http://mirror.einval.org/debian sid/main arm64 libjson-maybexs-perl all 1.004003-1 [13.1 kB] Get:63 http://mirror.einval.org/debian sid/main arm64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:64 http://mirror.einval.org/debian sid/main arm64 liblist-someutils-perl all 0.58-1 [36.5 kB] Get:65 http://mirror.einval.org/debian sid/main arm64 liblist-utilsby-perl all 0.11-1 [15.4 kB] Get:66 http://mirror.einval.org/debian sid/main arm64 liblzo2-2 arm64 2.10-2 [51.8 kB] Get:67 http://mirror.einval.org/debian sid/main arm64 libmarkdown2 arm64 2.2.7-2 [34.1 kB] Get:68 http://mirror.einval.org/debian sid/main arm64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:69 http://mirror.einval.org/debian sid/main arm64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:70 http://mirror.einval.org/debian sid/main arm64 libmoo-perl all 2.005004-3 [60.5 kB] Get:71 http://mirror.einval.org/debian sid/main arm64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:72 http://mirror.einval.org/debian sid/main arm64 libmoox-aliases-perl all 0.001006-1.1 [10.8 kB] Get:73 http://mirror.einval.org/debian sid/main arm64 libmouse-perl arm64 2.5.10-1+b2 [171 kB] Get:74 http://mirror.einval.org/debian sid/main arm64 libpackage-stash-perl all 0.39-1 [21.9 kB] Get:75 http://mirror.einval.org/debian sid/main arm64 libsub-identify-perl arm64 0.14-1+b4 [11.9 kB] Get:76 http://mirror.einval.org/debian sid/main arm64 libsub-name-perl arm64 0.26-1+b2 [13.5 kB] Get:77 http://mirror.einval.org/debian sid/main arm64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:78 http://mirror.einval.org/debian sid/main arm64 libpath-tiny-perl all 0.122-1 [56.0 kB] Get:79 http://mirror.einval.org/debian sid/main arm64 libperlio-gzip-perl arm64 0.19-1+b8 [17.0 kB] Get:80 http://mirror.einval.org/debian sid/main arm64 libperlio-utf8-strict-perl arm64 0.009-1+b1 [11.9 kB] Get:81 http://mirror.einval.org/debian sid/main arm64 libproc-processtable-perl arm64 0.634-1+b1 [46.4 kB] Get:82 http://mirror.einval.org/debian sid/main arm64 libsereal-decoder-perl arm64 4.019+ds-1 [94.5 kB] Get:83 http://mirror.einval.org/debian sid/main arm64 libsereal-encoder-perl arm64 4.019+ds-1 [97.5 kB] Get:84 http://mirror.einval.org/debian sid/main arm64 libsort-versions-perl all 1.62-1 [11.0 kB] Get:85 http://mirror.einval.org/debian sid/main arm64 libxs-parse-keyword-perl arm64 0.21-1+b1 [49.9 kB] Get:86 http://mirror.einval.org/debian sid/main arm64 libsyntax-keyword-try-perl arm64 0.26-1+b1 [28.6 kB] Get:87 http://mirror.einval.org/debian sid/main arm64 libterm-readkey-perl arm64 2.38-1+b3 [27.2 kB] Get:88 http://mirror.einval.org/debian sid/main arm64 libtext-levenshteinxs-perl arm64 0.03-4+b9 [8660 B] Get:89 http://mirror.einval.org/debian sid/main arm64 libtext-markdown-discount-perl arm64 0.13-1+b1 [13.4 kB] Get:90 http://mirror.einval.org/debian sid/main arm64 libtext-xslate-perl arm64 3.5.9-1+b1 [194 kB] Get:91 http://mirror.einval.org/debian sid/main arm64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:92 http://mirror.einval.org/debian sid/main arm64 libtime-moment-perl arm64 0.44-1+b4 [74.7 kB] Get:93 http://mirror.einval.org/debian sid/main arm64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:94 http://mirror.einval.org/debian sid/main arm64 libunicode-utf8-perl arm64 0.62-1+b3 [19.8 kB] Get:95 http://mirror.einval.org/debian sid/main arm64 liburi-perl all 5.10-1 [91.0 kB] Get:96 http://mirror.einval.org/debian sid/main arm64 libyaml-0-2 arm64 0.2.2-1 [45.1 kB] Get:97 http://mirror.einval.org/debian sid/main arm64 libyaml-libyaml-perl arm64 0.83+ds-1+b1 [34.4 kB] Get:98 http://mirror.einval.org/debian sid/main arm64 lzip arm64 1.22-5 [84.8 kB] Get:99 http://mirror.einval.org/debian sid/main arm64 lzop arm64 1.04-2 [82.8 kB] Get:100 http://mirror.einval.org/debian sid/main arm64 patchutils arm64 0.4.2-1 [73.5 kB] Get:101 http://mirror.einval.org/debian sid/main arm64 t1utils arm64 1.41-4 [59.8 kB] Get:102 http://mirror.einval.org/debian sid/main arm64 unzip arm64 6.0-26 [165 kB] Get:103 http://mirror.einval.org/debian sid/main arm64 lintian all 2.114.0 [1382 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7634 kB in 0s (37.2 MB/s) Selecting previously unselected package readline-common. (Reading database ... 22576 files and directories currently installed.) Preparing to unpack .../000-readline-common_8.1.2-1_all.deb ... Unpacking readline-common (8.1.2-1) ... Selecting previously unselected package libreadline8:arm64. Preparing to unpack .../001-libreadline8_8.1.2-1_arm64.deb ... Unpacking libreadline8:arm64 (8.1.2-1) ... Selecting previously unselected package diffstat. Preparing to unpack .../002-diffstat_1.64-1_arm64.deb ... Unpacking diffstat (1.64-1) ... Selecting previously unselected package libassuan0:arm64. Preparing to unpack .../003-libassuan0_2.5.5-1_arm64.deb ... Unpacking libassuan0:arm64 (2.5.5-1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../004-gpgconf_2.2.27-3_arm64.deb ... Unpacking gpgconf (2.2.27-3) ... Selecting previously unselected package libsqlite3-0:arm64. Preparing to unpack .../005-libsqlite3-0_3.37.2-2_arm64.deb ... Unpacking libsqlite3-0:arm64 (3.37.2-2) ... Selecting previously unselected package gpg. 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Unpacking libdevel-callchecker-perl (0.008-1+b3) ... Selecting previously unselected package libparams-classify-perl. Preparing to unpack .../012-libparams-classify-perl_0.015-1+b4_arm64.deb ... Unpacking libparams-classify-perl (0.015-1+b4) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../013-libmodule-runtime-perl_0.016-1_all.deb ... Unpacking libmodule-runtime-perl (0.016-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../014-libtry-tiny-perl_0.31-1_all.deb ... Unpacking libtry-tiny-perl (0.31-1) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../015-libmodule-implementation-perl_0.09-1.1_all.deb ... Unpacking libmodule-implementation-perl (0.09-1.1) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../016-libsub-exporter-progressive-perl_0.001013-1_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-1) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../017-libvariable-magic-perl_0.62-1+b4_arm64.deb ... Unpacking libvariable-magic-perl (0.62-1+b4) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../018-libb-hooks-endofscope-perl_0.25-1_all.deb ... Unpacking libb-hooks-endofscope-perl (0.25-1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../019-libcapture-tiny-perl_0.48-1_all.deb ... Unpacking libcapture-tiny-perl (0.48-1) ... Selecting previously unselected package libclass-data-inheritable-perl. Preparing to unpack .../020-libclass-data-inheritable-perl_0.08-3_all.deb ... Unpacking libclass-data-inheritable-perl (0.08-3) ... Selecting previously unselected package libclass-method-modifiers-perl. Preparing to unpack .../021-libclass-method-modifiers-perl_2.13-1_all.deb ... Unpacking libclass-method-modifiers-perl (2.13-1) ... Selecting previously unselected package libclass-xsaccessor-perl. Preparing to unpack .../022-libclass-xsaccessor-perl_1.19-3+b8_arm64.deb ... Unpacking libclass-xsaccessor-perl (1.19-3+b8) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../023-libclone-perl_0.45-1+b2_arm64.deb ... Unpacking libclone-perl (0.45-1+b2) ... Selecting previously unselected package libconfig-tiny-perl. Preparing to unpack .../024-libconfig-tiny-perl_2.28-1_all.deb ... Unpacking libconfig-tiny-perl (2.28-1) ... Selecting previously unselected package libparams-util-perl. Preparing to unpack .../025-libparams-util-perl_1.102-1+b2_arm64.deb ... Unpacking libparams-util-perl (1.102-1+b2) ... Selecting previously unselected package libsub-install-perl. Preparing to unpack .../026-libsub-install-perl_0.928-1.1_all.deb ... Unpacking libsub-install-perl (0.928-1.1) ... Selecting previously unselected package libdata-optlist-perl. Preparing to unpack .../027-libdata-optlist-perl_0.112-1_all.deb ... Unpacking libdata-optlist-perl (0.112-1) ... Selecting previously unselected package libsub-exporter-perl. Preparing to unpack .../028-libsub-exporter-perl_0.988-1_all.deb ... Unpacking libsub-exporter-perl (0.988-1) ... Selecting previously unselected package libconst-fast-perl. Preparing to unpack .../029-libconst-fast-perl_0.014-1.1_all.deb ... Unpacking libconst-fast-perl (0.014-1.1) ... Selecting previously unselected package libcpanel-json-xs-perl:arm64. Preparing to unpack .../030-libcpanel-json-xs-perl_4.27-1+b1_arm64.deb ... Unpacking libcpanel-json-xs-perl:arm64 (4.27-1+b1) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../031-libdevel-stacktrace-perl_2.0400-1_all.deb ... Unpacking libdevel-stacktrace-perl (2.0400-1) ... Selecting previously unselected package libexception-class-perl. Preparing to unpack .../032-libexception-class-perl_1.45-1_all.deb ... Unpacking libexception-class-perl (1.45-1) ... Selecting previously unselected package libiterator-perl. Preparing to unpack .../033-libiterator-perl_0.03+ds1-1.1_all.deb ... Unpacking libiterator-perl (0.03+ds1-1.1) ... Selecting previously unselected package libiterator-util-perl. Preparing to unpack .../034-libiterator-util-perl_0.02+ds1-1.1_all.deb ... Unpacking libiterator-util-perl (0.02+ds1-1.1) ... Selecting previously unselected package libexporter-tiny-perl. Preparing to unpack .../035-libexporter-tiny-perl_1.002002-1_all.deb ... Unpacking libexporter-tiny-perl (1.002002-1) ... Selecting previously unselected package liblist-moreutils-xs-perl. Preparing to unpack .../036-liblist-moreutils-xs-perl_0.430-2+b1_arm64.deb ... Unpacking liblist-moreutils-xs-perl (0.430-2+b1) ... Selecting previously unselected package liblist-moreutils-perl. Preparing to unpack .../037-liblist-moreutils-perl_0.430-2_all.deb ... Unpacking liblist-moreutils-perl (0.430-2) ... 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Unpacking libemail-address-xs-perl (1.04-1+b4) ... Selecting previously unselected package libipc-system-simple-perl. Preparing to unpack .../049-libipc-system-simple-perl_1.30-1_all.deb ... Unpacking libipc-system-simple-perl (1.30-1) ... Selecting previously unselected package libfile-basedir-perl. Preparing to unpack .../050-libfile-basedir-perl_0.09-1_all.deb ... Unpacking libfile-basedir-perl (0.09-1) ... Selecting previously unselected package libnumber-compare-perl. Preparing to unpack .../051-libnumber-compare-perl_0.03-2_all.deb ... Unpacking libnumber-compare-perl (0.03-2) ... Selecting previously unselected package libtext-glob-perl. Preparing to unpack .../052-libtext-glob-perl_0.11-2_all.deb ... Unpacking libtext-glob-perl (0.11-2) ... Selecting previously unselected package libfile-find-rule-perl. Preparing to unpack .../053-libfile-find-rule-perl_0.34-1_all.deb ... Unpacking libfile-find-rule-perl (0.34-1) ... Selecting previously unselected package libfont-ttf-perl. Preparing to unpack .../054-libfont-ttf-perl_1.06-1.1_all.deb ... Unpacking libfont-ttf-perl (1.06-1.1) ... Selecting previously unselected package libhtml-html5-entities-perl. Preparing to unpack .../055-libhtml-html5-entities-perl_0.004-1.1_all.deb ... Unpacking libhtml-html5-entities-perl (0.004-1.1) ... Selecting previously unselected package libimport-into-perl. Preparing to unpack .../056-libimport-into-perl_1.002005-1_all.deb ... Unpacking libimport-into-perl (1.002005-1) ... Selecting previously unselected package libio-interactive-perl. Preparing to unpack .../057-libio-interactive-perl_1.023-1_all.deb ... Unpacking libio-interactive-perl (1.023-1) ... Selecting previously unselected package libio-prompt-tiny-perl. Preparing to unpack .../058-libio-prompt-tiny-perl_0.003-1_all.deb ... Unpacking libio-prompt-tiny-perl (0.003-1) ... Selecting previously unselected package libipc-run3-perl. Preparing to unpack .../059-libipc-run3-perl_0.048-2_all.deb ... Unpacking libipc-run3-perl (0.048-2) ... Selecting previously unselected package libjson-maybexs-perl. Preparing to unpack .../060-libjson-maybexs-perl_1.004003-1_all.deb ... Unpacking libjson-maybexs-perl (1.004003-1) ... Selecting previously unselected package liblist-compare-perl. Preparing to unpack .../061-liblist-compare-perl_0.55-1_all.deb ... Unpacking liblist-compare-perl (0.55-1) ... Selecting previously unselected package liblist-someutils-perl. Preparing to unpack .../062-liblist-someutils-perl_0.58-1_all.deb ... Unpacking liblist-someutils-perl (0.58-1) ... Selecting previously unselected package liblist-utilsby-perl. Preparing to unpack .../063-liblist-utilsby-perl_0.11-1_all.deb ... Unpacking liblist-utilsby-perl (0.11-1) ... Selecting previously unselected package liblzo2-2:arm64. Preparing to unpack .../064-liblzo2-2_2.10-2_arm64.deb ... Unpacking liblzo2-2:arm64 (2.10-2) ... Selecting previously unselected package libmarkdown2:arm64. 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Selecting previously unselected package libmouse-perl. Preparing to unpack .../071-libmouse-perl_2.5.10-1+b2_arm64.deb ... Unpacking libmouse-perl (2.5.10-1+b2) ... Selecting previously unselected package libpackage-stash-perl. Preparing to unpack .../072-libpackage-stash-perl_0.39-1_all.deb ... Unpacking libpackage-stash-perl (0.39-1) ... Selecting previously unselected package libsub-identify-perl. Preparing to unpack .../073-libsub-identify-perl_0.14-1+b4_arm64.deb ... Unpacking libsub-identify-perl (0.14-1+b4) ... Selecting previously unselected package libsub-name-perl. Preparing to unpack .../074-libsub-name-perl_0.26-1+b2_arm64.deb ... Unpacking libsub-name-perl (0.26-1+b2) ... Selecting previously unselected package libnamespace-clean-perl. Preparing to unpack .../075-libnamespace-clean-perl_0.27-1_all.deb ... Unpacking libnamespace-clean-perl (0.27-1) ... Selecting previously unselected package libpath-tiny-perl. Preparing to unpack .../076-libpath-tiny-perl_0.122-1_all.deb ... Unpacking libpath-tiny-perl (0.122-1) ... Selecting previously unselected package libperlio-gzip-perl. Preparing to unpack .../077-libperlio-gzip-perl_0.19-1+b8_arm64.deb ... Unpacking libperlio-gzip-perl (0.19-1+b8) ... Selecting previously unselected package libperlio-utf8-strict-perl. Preparing to unpack .../078-libperlio-utf8-strict-perl_0.009-1+b1_arm64.deb ... Unpacking libperlio-utf8-strict-perl (0.009-1+b1) ... Selecting previously unselected package libproc-processtable-perl:arm64. Preparing to unpack .../079-libproc-processtable-perl_0.634-1+b1_arm64.deb ... Unpacking libproc-processtable-perl:arm64 (0.634-1+b1) ... Selecting previously unselected package libsereal-decoder-perl. Preparing to unpack .../080-libsereal-decoder-perl_4.019+ds-1_arm64.deb ... Unpacking libsereal-decoder-perl (4.019+ds-1) ... Selecting previously unselected package libsereal-encoder-perl:arm64. 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Setting up lzip (1.22-5) ... update-alternatives: using /usr/bin/lzip.lzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.lzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.lzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up t1utils (1.41-4) ... Setting up diffstat (1.64-1) ... Setting up libvariable-magic-perl (0.62-1+b4) ... Setting up libb-hooks-op-check-perl (0.22-1+b4) ... Setting up liblist-moreutils-xs-perl (0.430-2+b1) ... Setting up libparams-util-perl (1.102-1+b2) ... Setting up libtime-duration-perl (1.21-1) ... Setting up libtext-xslate-perl:arm64 (3.5.9-1+b1) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libsub-name-perl (0.26-1+b2) ... Setting up libsyntax-keyword-try-perl (0.26-1+b1) ... 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I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Build-Space: 32876 Build-Time: 260 Distribution: unstable Foreign Architectures: i386 Host Architecture: i386 Install-Time: 43 Job: libminc_2.4.03-5 Lintian: pass Machine Architecture: arm64 Package: libminc Package-Time: 333 Source-Version: 2.4.03-5 Space: 32876 Status: successful Version: 2.4.03-5 -------------------------------------------------------------------------------- Finished at 2022-02-13T15:52:43Z Build needed 00:05:33, 32876k disk space