sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | libmuscle 3.7+4565-7 (mips64el) Sat, 05 Dec 2020 16:19:32 +0000 | +==============================================================================+ Package: libmuscle Version: 3.7+4565-7 Source Version: 3.7+4565-7 Distribution: unstable Machine Architecture: amd64 Host Architecture: mips64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-e852fcba-4706-4656-ac4c-bd41e8f05c06' with '<>' I: NOTICE: Log filtering will replace 'build/libmuscle-SnNT6h/resolver-musGQW' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [150 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [37.0 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [37.0 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-12-05-1412.41.pdiff [17.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-12-05-1412.41.pdiff [17.8 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-12-05-1412.41.pdiff [23.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-12-05-1412.41.pdiff [23.4 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main mips64el Packages [8222 kB] Fetched 8487 kB in 2s (5409 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'libmuscle' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libmuscle.git Please use: git clone https://salsa.debian.org/med-team/libmuscle.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 199 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main libmuscle 3.7+4565-7 (dsc) [2078 B] Get:2 http://debian.oregonstate.edu/debian unstable/main libmuscle 3.7+4565-7 (tar) [184 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main libmuscle 3.7+4565-7 (diff) [12.4 kB] Fetched 199 kB in 0s (15.1 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/libmuscle-SnNT6h/libmuscle-3.7+4565' with '<>' I: NOTICE: Log filtering will replace 'build/libmuscle-SnNT6h' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el Filtered Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [420 B] Get:5 copy:/<>/apt_archive ./ Packages [510 B] Fetched 1887 B in 0s (78.3 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdextrautils build-essential cpp-10-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-10-base:mips64el gcc-10-cross-base-mipsen gcc-10-mips64el-linux-gnuabi64 gcc-10-mips64el-linux-gnuabi64-base gcc-9-base:mips64el gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libcom-err2:mips64el libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-mips64el-cross libgcc-9-dev:mips64el libgcc-s1:mips64el libgcc-s1-mips64el-cross libglib2.0-0 libgomp1:mips64el libgomp1-mips64el-cross libgssapi-krb5-2 libgssapi-krb5-2:mips64el libicu67 libio-string-perl libisl22 libk5crypto3 libk5crypto3:mips64el libkeyutils1 libkeyutils1:mips64el libkrb5-3 libkrb5-3:mips64el libkrb5support0 libkrb5support0:mips64el liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev libnsl-dev:mips64el libnsl2 libnsl2:mips64el libperl5.32 libpipeline1 libsigsegv2 libssl1.1 libssl1.1:mips64el libstdc++-10-dev libstdc++-10-dev-mips64el-cross libstdc++-9-dev:mips64el libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libtirpc-common libtirpc-dev libtirpc-dev:mips64el libtirpc3 libtirpc3:mips64el libtool libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db perl perl-modules-5.32 pkg-config po-debconf sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-10-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-10-multilib gcc-10-doc g++-10-multilib-mips64el-linux-gnuabi64 gcc-10-multilib-mips64el-linux-gnuabi64 manpages-dev flex bison gdb-mips64el-linux-gnuabi64 gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:mips64el libc-l10n:mips64el locales:mips64el glibc-doc manpages-dev:mips64el gnupg git bzr krb5-doc krb5-user krb5-doc:mips64el krb5-user:mips64el libstdc++-10-doc libstdc++-9-doc:mips64el libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx libidn2-0:mips64el libnss-nis:mips64el libnss-nisplus:mips64el libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales krb5-locales:mips64el libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdextrautils build-essential cpp-10-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-10-base:mips64el gcc-10-cross-base-mipsen gcc-10-mips64el-linux-gnuabi64 gcc-10-mips64el-linux-gnuabi64-base gcc-9-base:mips64el gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libcom-err2:mips64el libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-mips64el-cross libgcc-9-dev:mips64el libgcc-s1:mips64el libgcc-s1-mips64el-cross libglib2.0-0 libgomp1:mips64el libgomp1-mips64el-cross libgssapi-krb5-2 libgssapi-krb5-2:mips64el libicu67 libio-string-perl libisl22 libk5crypto3 libk5crypto3:mips64el libkeyutils1 libkeyutils1:mips64el libkrb5-3 libkrb5-3:mips64el libkrb5support0 libkrb5support0:mips64el liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev libnsl-dev:mips64el libnsl2 libnsl2:mips64el libperl5.32 libpipeline1 libsigsegv2 libssl1.1 libssl1.1:mips64el libstdc++-10-dev libstdc++-10-dev-mips64el-cross libstdc++-9-dev:mips64el libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libtirpc-common libtirpc-dev libtirpc-dev:mips64el libtirpc3 libtirpc3:mips64el libtool libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db perl perl-modules-5.32 pkg-config po-debconf sbuild-build-depends-main-dummy:mips64el sensible-utils ucf 0 upgraded, 118 newly installed, 0 to remove and 0 not upgraded. Need to get 133 MB of archives. After this operation, 556 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [936 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.36.1-2 [140 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-5 [920 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.3-2 [1314 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.32 all 5.32.0-5 [2821 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.32 amd64 5.32.0-5 [4119 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.32.0-5 [293 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4+b1 [19.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main mips64el gcc-10-base mips64el 10.2.0-23 [201 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main mips64el gcc-9-base mips64el 9.3.0-19 [198 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.39-3 [69.1 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.3-1 [814 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mips64el-linux-gnuabi64 amd64 2.35.1-2cross2 [2354 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.17-1 [104 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5support0 amd64 1.18.3-4 [65.1 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libk5crypto3 amd64 1.18.3-4 [113 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libkeyutils1 amd64 1.6.1-2 [15.4 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1h-1 [1550 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5-3 amd64 1.18.3-4 [362 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.18.3-4 [165 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-common all 1.2.6-3 [13.3 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc3 amd64 1.2.6-3 [83.4 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl2 amd64 1.3.0-2 [39.5 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.2.6-3 [190 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.31-5 [2342 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev amd64 10.2.0-23 [1741 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10 amd64 10.2.0-23 [44.7 MB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:10.2.0-1 [1644 B] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.5 [1473 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.5 [1909 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-mips64el-linux-gnuabi64-base amd64 10.2.0-17cross1 [200 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libisl22 amd64 0.22.1-1 [612 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-10-mips64el-linux-gnuabi64 amd64 10.2.0-17cross1 [6983 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mips64el-linux-gnuabi64 amd64 4:10.2.0-1 [16.9 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3.1 [39.9 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base-mipsen all 10.2.0-17cross1 [196 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mips64el-cross all 2.31-2cross1 [1336 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-mips64el-cross all 10.2.0-17cross1 [69.7 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mips64el-cross all 10.2.0-17cross1 [88.3 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mips64el-cross all 10.2.0-17cross1 [7368 B] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-10-dev-mips64el-cross all 10.2.0-17cross1 [270 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-mips64el-linux-gnuabi64 amd64 10.2.0-17cross1 [13.6 MB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mips64el-linux-gnuabi64 amd64 4:10.2.0-1 [1480 B] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mips64el-cross all 10.2.0-17cross1 [393 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mips64el-cross all 5.7.10-1cross1 [1237 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mips64el-cross all 2.31-2cross1 [2256 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev-mips64el-cross all 10.2.0-17cross1 [1764 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10-mips64el-linux-gnuabi64 amd64 10.2.0-17cross1 [7648 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mips64el-linux-gnuabi64 amd64 4:10.2.0-1 [1192 B] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-4 [8624 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-6.3 [693 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2+b1 [337 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3.1 [38.9 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3.1 [49.9 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mips64el all 12.8 [6704 B] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 d-shlibs all 0.96 [17.8 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.2.1 [188 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.9.0-1 [15.2 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.182-1 [166 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.66.3-2 [1366 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.2.1 [1007 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-s1 mips64el 10.2.0-23 [69.5 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt1 mips64el 1:4.4.17-1 [93.1 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main mips64el libc6 mips64el 2.31-5 [2546 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main mips64el libatomic1 mips64el 10.2.0-23 [7540 B] Get:100 http://debian.oregonstate.edu/debian unstable/main mips64el linux-libc-dev mips64el 5.9.11-1 [1224 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt-dev mips64el 1:4.4.17-1 [115 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main mips64el libcom-err2 mips64el 1.45.6-1 [71.5 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main mips64el libkrb5support0 mips64el 1.18.3-4 [63.2 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main mips64el libk5crypto3 mips64el 1.18.3-4 [120 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main mips64el libkeyutils1 mips64el 1.6.1-2 [15.0 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main mips64el libssl1.1 mips64el 1.1.1h-1 [1147 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main mips64el libkrb5-3 mips64el 1.18.3-4 [328 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main mips64el libgssapi-krb5-2 mips64el 1.18.3-4 [150 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main mips64el libtirpc3 mips64el 1.2.6-3 [74.0 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main mips64el libnsl2 mips64el 1.3.0-2 [35.5 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main mips64el libtirpc-dev mips64el 1.2.6-3 [200 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main mips64el libnsl-dev mips64el 1.3.0-2 [70.3 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main mips64el libc6-dev mips64el 2.31-5 [2202 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main mips64el libgomp1 mips64el 10.2.0-23 [90.2 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-9-dev mips64el 9.3.0-19 [248 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++6 mips64el 10.2.0-23 [433 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++-9-dev mips64el 9.3.0-19 [1739 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main amd64 pkg-config amd64 0.29.2-1 [65.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 133 MB in 1s (120 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10437 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.36.1-2_amd64.deb ... Unpacking bsdextrautils (2.36.1-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../001-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-5_amd64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../003-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.3-2_amd64.deb ... Unpacking man-db (2.9.3-2) ... Selecting previously unselected package perl-modules-5.32. Preparing to unpack .../005-perl-modules-5.32_5.32.0-5_all.deb ... Unpacking perl-modules-5.32 (5.32.0-5) ... 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Selecting previously unselected package libtirpc3:mips64el. Preparing to unpack .../107-libtirpc3_1.2.6-3_mips64el.deb ... Unpacking libtirpc3:mips64el (1.2.6-3) ... Selecting previously unselected package libnsl2:mips64el. Preparing to unpack .../108-libnsl2_1.3.0-2_mips64el.deb ... Unpacking libnsl2:mips64el (1.3.0-2) ... Selecting previously unselected package libtirpc-dev:mips64el. Preparing to unpack .../109-libtirpc-dev_1.2.6-3_mips64el.deb ... Unpacking libtirpc-dev:mips64el (1.2.6-3) ... Selecting previously unselected package libnsl-dev:mips64el. Preparing to unpack .../110-libnsl-dev_1.3.0-2_mips64el.deb ... Unpacking libnsl-dev:mips64el (1.3.0-2) ... Selecting previously unselected package libc6-dev:mips64el. Preparing to unpack .../111-libc6-dev_2.31-5_mips64el.deb ... Unpacking libc6-dev:mips64el (2.31-5) ... Selecting previously unselected package libgomp1:mips64el. Preparing to unpack .../112-libgomp1_10.2.0-23_mips64el.deb ... Unpacking libgomp1:mips64el (10.2.0-23) ... Selecting previously unselected package libgcc-9-dev:mips64el. Preparing to unpack .../113-libgcc-9-dev_9.3.0-19_mips64el.deb ... Unpacking libgcc-9-dev:mips64el (9.3.0-19) ... Selecting previously unselected package libstdc++6:mips64el. Preparing to unpack .../114-libstdc++6_10.2.0-23_mips64el.deb ... Unpacking libstdc++6:mips64el (10.2.0-23) ... Selecting previously unselected package libstdc++-9-dev:mips64el. Preparing to unpack .../115-libstdc++-9-dev_9.3.0-19_mips64el.deb ... Unpacking libstdc++-9-dev:mips64el (9.3.0-19) ... Selecting previously unselected package pkg-config. Preparing to unpack .../116-pkg-config_0.29.2-1_amd64.deb ... Unpacking pkg-config (0.29.2-1) ... Selecting previously unselected package sbuild-build-depends-main-dummy:mips64el. Preparing to unpack .../117-sbuild-build-depends-main-dummy_0.invalid.0_mips64el.deb ... Unpacking sbuild-build-depends-main-dummy:mips64el (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libpipeline1:amd64 (1.5.3-1) ... Setting up libkeyutils1:amd64 (1.6.1-2) ... Setting up bsdextrautils (2.36.1-2) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-4) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libglib2.0-0:amd64 (2.66.3-2) ... No schema files found: doing nothing. Setting up libssl1.1:amd64 (1.1.1h-1) ... Setting up libtirpc-common (1.2.6-3) ... Setting up perl-modules-5.32 (5.32.0-5) ... Setting up libmagic1:amd64 (1:5.39-3) ... Setting up linux-libc-dev:mips64el (5.9.11-1) ... Setting up libc6-mips64el-cross (2.31-2cross1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up gcc-10-mips64el-linux-gnuabi64-base:amd64 (10.2.0-17cross1) ... Setting up file (1:5.39-3) ... Setting up binutils-mips64el-linux-gnuabi64 (2.35.1-2cross2) ... Setting up libkrb5support0:amd64 (1.18.3-4) ... Setting up gcc-10-base:mips64el (10.2.0-23) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3.1) ... Setting up gcc-10-cross-base-mipsen (10.2.0-17cross1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up autopoint (0.19.8.1-10) ... Setting up d-shlibs (0.96) ... Setting up libk5crypto3:amd64 (1.18.3-4) ... Setting up libperl5.32:amd64 (5.32.0-5) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.17-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libisl22:amd64 (0.22.1-1) ... Setting up linux-libc-dev-mips64el-cross (5.7.10-1cross1) ... Setting up libkrb5-3:amd64 (1.18.3-4) ... Setting up libgomp1-mips64el-cross (10.2.0-17cross1) ... Setting up libgcc-s1-mips64el-cross (10.2.0-17cross1) ... Setting up libelf1:amd64 (0.182-1) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.3) ... Setting up liblocale-gettext-perl (1.07-4+b1) ... Setting up gcc-9-base:mips64el (9.3.0-19) ... Setting up libatomic1-mips64el-cross (10.2.0-17cross1) ... Setting up m4 (1.4.18-4) ... Setting up cpp-10-mips64el-linux-gnuabi64 (10.2.0-17cross1) ... Setting up perl (5.32.0-5) ... Setting up libc6-dev-mips64el-cross (2.31-2cross1) ... Setting up libgcc-10-dev-mips64el-cross (10.2.0-17cross1) ... Setting up libgssapi-krb5-2:amd64 (1.18.3-4) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.5) ... Setting up autoconf (2.69-11.1) ... Setting up libstdc++6-mips64el-cross (10.2.0-17cross1) ... Setting up libstdc++-10-dev-mips64el-cross (10.2.0-17cross1) ... Setting up dwz (0.13-5) ... Setting up gcc-10-mips64el-linux-gnuabi64 (10.2.0-17cross1) ... Setting up groff-base (1.22.4-5) ... Setting up libsub-override-perl (0.09-2) ... Setting up cpp-mips64el-linux-gnuabi64 (4:10.2.0-1) ... Setting up automake (1:1.16.3-1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libtirpc3:amd64 (1.2.6-3) ... Setting up libfile-which-perl (1.23-1) ... Setting up gettext (0.19.8.1-10) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up g++-10-mips64el-linux-gnuabi64 (10.2.0-17cross1) ... Setting up libdebhelper-perl (13.2.1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.20.5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up libtirpc-dev:amd64 (1.2.6-3) ... Setting up pkg-config (0.29.2-1) ... Setting up gcc-mips64el-linux-gnuabi64 (4:10.2.0-1) ... Setting up libnsl2:amd64 (1.3.0-2) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up g++-mips64el-linux-gnuabi64 (4:10.2.0-1) ... Setting up po-debconf (1.0.21) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0134+dfsg-2+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up libc6-dev:amd64 (2.31-5) ... Setting up libstdc++-10-dev:amd64 (10.2.0-23) ... Setting up g++-10 (10.2.0-23) ... Setting up libtool (2.4.6-14) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++ (4:10.2.0-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up build-essential (12.8) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3.1) ... Setting up dpkg-cross (2.6.15-3.1) ... Setting up crossbuild-essential-mips64el (12.8) ... Setting up libcrypt1:mips64el (1:4.4.17-1) ... Setting up libgcc-s1:mips64el (10.2.0-23) ... Setting up dh-autoreconf (19) ... Setting up libc6:mips64el (2.31-5) ... Setting up libcrypt-dev:mips64el (1:4.4.17-1) ... Setting up libstdc++6:mips64el (10.2.0-23) ... Setting up libkeyutils1:mips64el (1.6.1-2) ... Setting up libssl1.1:mips64el (1.1.1h-1) ... Setting up debhelper (13.2.1) ... Setting up libcom-err2:mips64el (1.45.6-1) ... Setting up libgomp1:mips64el (10.2.0-23) ... Setting up libkrb5support0:mips64el (1.18.3-4) ... Setting up libatomic1:mips64el (10.2.0-23) ... Setting up libk5crypto3:mips64el (1.18.3-4) ... Setting up libkrb5-3:mips64el (1.18.3-4) ... Setting up libgcc-9-dev:mips64el (9.3.0-19) ... Setting up libgssapi-krb5-2:mips64el (1.18.3-4) ... Setting up libtirpc3:mips64el (1.2.6-3) ... Setting up libtirpc-dev:mips64el (1.2.6-3) ... Setting up libnsl2:mips64el (1.3.0-2) ... Setting up libnsl-dev:mips64el (1.3.0-2) ... Setting up libc6-dev:mips64el (2.31-5) ... Setting up libstdc++-9-dev:mips64el (9.3.0-19) ... Setting up sbuild-build-depends-main-dummy:mips64el (0.invalid.0) ... Processing triggers for libc-bin (2.31-5) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mips64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-12-amd64 #1 SMP Debian 4.19.152-1 (2020-10-18) amd64 (x86_64) Toolchain package versions: binutils_2.35.1-3 dpkg-dev_1.20.5 g++-10_10.2.0-23 gcc-10_10.2.0-23 libc6-dev_2.31-5 libstdc++-10-dev_10.2.0-23 libstdc++-10-dev-mips64el-cross_10.2.0-17cross1 libstdc++-9-dev_9.3.0-19 libstdc++6_10.2.0-23 libstdc++6-mips64el-cross_10.2.0-17cross1 linux-libc-dev_5.9.11-1 Package versions: adduser_3.118 apt_2.1.12 autoconf_2.69-11.1 automake_1:1.16.3-1 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.48 bash_5.1~rc3-1 binutils_2.35.1-3 binutils-common_2.35.1-3 binutils-mips64el-linux-gnuabi64_2.35.1-2cross2 binutils-x86-64-linux-gnu_2.35.1-3 bsdextrautils_2.36.1-2 bsdutils_1:2.36.1-2 build-essential_12.8 bzip2_1.0.8-4 coreutils_8.32-4+b1 cpp_4:10.2.0-1 cpp-10_10.2.0-23 cpp-10-mips64el-linux-gnuabi64_10.2.0-17cross1 cpp-8_8.4.0-5 cpp-mips64el-linux-gnuabi64_4:10.2.0-1 cross-config_2.6.15-3.1 crossbuild-essential-mips64el_12.8 d-shlibs_0.96 dash_0.5.11+git20200708+dd9ef66-2 debconf_1.5.74 debhelper_13.2.1 debian-archive-keyring_2019.1 debianutils_4.11.2 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dpkg_1.20.5 dpkg-cross_2.6.15-3.1 dpkg-dev_1.20.5 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1.1 fdisk_2.36.1-2 file_1:5.39-3 findutils_4.7.0+git20201010-2 g++_4:10.2.0-1 g++-10_10.2.0-23 g++-10-mips64el-linux-gnuabi64_10.2.0-17cross1 g++-mips64el-linux-gnuabi64_4:10.2.0-1 gcc_4:10.2.0-1 gcc-10_10.2.0-23 gcc-10-base_10.2.0-23 gcc-10-cross-base-mipsen_10.2.0-17cross1 gcc-10-mips64el-linux-gnuabi64_10.2.0-17cross1 gcc-10-mips64el-linux-gnuabi64-base_10.2.0-17cross1 gcc-8-base_8.4.0-5 gcc-9-base_9.3.0-19 gcc-mips64el-linux-gnuabi64_4:10.2.0-1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.59 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.1.12 libarchive-zip-perl_1.68-1 libasan5_9.3.0-19 libasan6_10.2.0-23 libatomic1_10.2.0-23 libatomic1-mips64el-cross_10.2.0-17cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3.1 libaudit1_1:2.8.5-3.1 libbinutils_2.35.1-3 libblkid1_2.36.1-2 libbz2-1.0_1.0.8-4 libc-bin_2.31-5 libc-dev-bin_2.31-5 libc6_2.31-5 libc6-dev_2.31-5 libc6-dev-mips64el-cross_2.31-2cross1 libc6-mips64el-cross_2.31-2cross1 libcap-ng0_0.7.9-2.2+b1 libcc1-0_10.2.0-23 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000003-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-3 libctf0_2.35.1-3 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.255 libdebhelper-perl_13.2.1 libdebian-dpkgcross-perl_2.6.15-3.1 libdpkg-perl_1.20.5 libelf1_0.182-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1.1 libfdisk1_2.36.1-2 libffi6_3.2.1-9 libffi7_3.3-5 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.9.0-1 libfile-which-perl_1.23-1 libgcc-10-dev_10.2.0-23 libgcc-10-dev-mips64el-cross_10.2.0-17cross1 libgcc-9-dev_9.3.0-19 libgcc-s1_10.2.0-23 libgcc-s1-mips64el-cross_10.2.0-17cross1 libgcrypt20_1.8.7-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libglib2.0-0_2.66.3-2 libgmp10_2:6.2.1+dfsg-1 libgnutls30_3.6.15-4 libgomp1_10.2.0-23 libgomp1-mips64el-cross_10.2.0-17cross1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.18.3-4 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.6-2 libicu67_67.1-4 libidn2-0_2.3.0-4 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 libisl23_0.23-1 libitm1_10.2.0-23 libk5crypto3_1.18.3-4 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-4 libkrb5support0_1.18.3-4 liblocale-gettext-perl_1.07-4+b1 liblsan0_10.2.0-23 liblz4-1_1.9.2-2 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmount1_2.36.1-2 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libmpx2_8.4.0-5 libncursesw6_6.2+20201114-1 libnettle6_3.5.1+really3.4.1-1 libnettle8_3.6-2 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.23.21-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.35-2 libpcre3_2:8.39-13 libperl5.28_5.28.1-6 libperl5.32_5.32.0-5 libpipeline1_1.5.3-1 libquadmath0_10.2.0-23 libseccomp2_2.5.0-3 libselinux1_3.1-2+b1 libsemanage-common_3.1-1 libsemanage1_3.1-1+b1 libsepol1_3.1-1 libsigsegv2_2.12-2 libsmartcols1_2.36.1-2 libss2_1.45.6-1 libssl1.1_1.1.1h-1 libstdc++-10-dev_10.2.0-23 libstdc++-10-dev-mips64el-cross_10.2.0-17cross1 libstdc++-9-dev_9.3.0-19 libstdc++6_10.2.0-23 libstdc++6-mips64el-cross_10.2.0-17cross1 libsub-override-perl_0.09-2 libsystemd0_247.1-3 libtasn1-6_4.16.0-2 libtinfo6_6.2+20201114-1 libtirpc-common_1.2.6-3 libtirpc-dev_1.2.6-3 libtirpc3_1.2.6-3 libtool_2.4.6-14 libtsan0_10.2.0-23 libubsan1_10.2.0-23 libuchardet0_0.0.7-1 libudev1_247.1-3 libunistring2_0.9.10-4 libuuid1_2.36.1-2 libxml-libxml-perl_2.0134+dfsg-2+b1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-6.3 libyaml-perl_1.30-1 libzstd1_1.4.5+dfsg-4 linux-libc-dev_5.9.11-1 linux-libc-dev-mips64el-cross_5.7.10-1cross1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.36.1-2 ncurses-base_6.2+20201114-1 ncurses-bin_6.2+20201114-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.32.0-5 perl-base_5.32.0-5 perl-modules-5.28_5.28.1-6 perl-modules-5.32_5.32.0-5 pkg-config_0.29.2-1 po-debconf_1.0.21 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-5 tar_1.32+dfsg-1 tzdata_2020d-1 ucf_3.0043 util-linux_2.36.1-2 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: libmuscle Binary: libmuscle-dev, libmuscle1 Architecture: any Version: 3.7+4565-7 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: http://sourceforge.net/p/mauve/code/HEAD/tree/muscle/trunk/ Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/libmuscle Vcs-Git: https://salsa.debian.org/med-team/libmuscle.git Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config Package-List: libmuscle-dev deb libdevel optional arch=any libmuscle1 deb libs optional arch=any Checksums-Sha1: 79bba85d6f4908f4b6e7f42d9c5426958bfceca6 184444 libmuscle_3.7+4565.orig.tar.xz 2b20aade450412a1c21c85257ed990883f2e6f3a 12396 libmuscle_3.7+4565-7.debian.tar.xz Checksums-Sha256: 7919b2378c8e41badb0828a8fdf8b184e67aeeb5a9f91566935e8a72a9e3b376 184444 libmuscle_3.7+4565.orig.tar.xz 4fbf69f8c8dc7b4b2f58d0e96276d7c42b8b6e68c4ea83ea34d0c5b9c2868353 12396 libmuscle_3.7+4565-7.debian.tar.xz Files: cc28b356074dcf1ef98f9634f9bc1d74 184444 libmuscle_3.7+4565.orig.tar.xz 27fb6f704e86f5ef134520a7f00a8c5c 12396 libmuscle_3.7+4565-7.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl+yzqMRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtG3qg/+IXJHeO48CiaMtra+lZLkRRtdsMmYYsp3 LXB+UO9G8kzudBMbKlW4xM8nnfmWJHCs1/8WbiC3iJmXgLG2AEyq12gmPdjKgu4y jYXsuU+gc0h817qzczqSc8UKtaxi3vMpxLjnTqVEjAcu9D+WsrLkmxc0/nEmWrZI V3zgIB8r2EZE34N2z9OUbljNNuIe5/ihIDmUI+CosNgyzpU12gWJQnU96qe4GTjp bpcCFl/taR88AfdpX9UuaGsFKQb87Tvxn8a5dhxfW0mM+fhSgoc1rN4lCOQ04ENW F2XaAaHzjQ6TqTEC75Kq0suhjxqo15bA0WSzl4pdcXZ2yi75mkf7qvIZ+H/AKQqr 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debian/patches/series dpkg-source: info: applying parsnp_changes.patch dpkg-source: info: applying drop_version_from_library_name.patch dpkg-source: info: applying makefile_deps.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mips64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-e852fcba-4706-4656-ac4c-bd41e8f05c06 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -amips64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package libmuscle dpkg-buildpackage: info: source version 3.7+4565-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type mips64el-linux-gnuabi64 does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mips64el debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'config'. libtoolize: copying file 'config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:52: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.ac:52: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation configure.ac:64: installing 'config/compile' configure.ac:64: installing 'config/config.guess' configure.ac:64: installing 'config/config.sub' configure.ac:52: installing 'config/install-sh' configure.ac:52: installing 'config/missing' Makefile.am: installing './INSTALL' libMUSCLE/Makefile.am:28: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') libMUSCLE/Makefile.am: installing 'config/depcomp' dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/mips64el-linux-gnuabi64 --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=mips64el-linux-gnuabi64 configure: loading site script /etc/dpkg-cross/cross-config.mips64el checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for mips64el-linux-gnuabi64-strip... mips64el-linux-gnuabi64-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for mips64el-linux-gnuabi64-g++... mips64el-linux-gnuabi64-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether mips64el-linux-gnuabi64-g++ accepts -g... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of mips64el-linux-gnuabi64-g++... none checking whether ln -s works... yes checking build system type... x86_64-pc-linux-gnu checking host system type... mips64el-unknown-linux-gnuabi64 checking how to print strings... printf checking for mips64el-linux-gnuabi64-gcc... mips64el-linux-gnuabi64-gcc checking whether we are using the GNU C compiler... yes checking whether mips64el-linux-gnuabi64-gcc accepts -g... yes checking for mips64el-linux-gnuabi64-gcc option to accept ISO C89... none needed checking whether mips64el-linux-gnuabi64-gcc understands -c and -o together... yes checking dependency style of mips64el-linux-gnuabi64-gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by mips64el-linux-gnuabi64-gcc... /usr/mips64el-linux-gnuabi64/bin/ld checking if the linker (/usr/mips64el-linux-gnuabi64/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/mips64el-linux-gnuabi64-nm -B checking the name lister (/usr/bin/mips64el-linux-gnuabi64-nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to mips64el-unknown-linux-gnuabi64 format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/mips64el-linux-gnuabi64/bin/ld option to reload object files... -r checking for mips64el-linux-gnuabi64-objdump... mips64el-linux-gnuabi64-objdump checking how to recognize dependent libraries... pass_all checking for mips64el-linux-gnuabi64-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for mips64el-linux-gnuabi64-ar... mips64el-linux-gnuabi64-ar checking for archiver @FILE support... @ checking for mips64el-linux-gnuabi64-strip... (cached) mips64el-linux-gnuabi64-strip checking for mips64el-linux-gnuabi64-ranlib... mips64el-linux-gnuabi64-ranlib checking command to parse /usr/bin/mips64el-linux-gnuabi64-nm -B output from mips64el-linux-gnuabi64-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mips64el-linux-gnuabi64-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... mips64el-linux-gnuabi64-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mips64el-linux-gnuabi64-gcc supports -fno-rtti -fno-exceptions... no checking for mips64el-linux-gnuabi64-gcc option to produce PIC... -fPIC -DPIC checking if mips64el-linux-gnuabi64-gcc PIC flag -fPIC -DPIC works... yes checking if mips64el-linux-gnuabi64-gcc static flag -static works... yes checking if mips64el-linux-gnuabi64-gcc supports -c -o file.o... yes checking if mips64el-linux-gnuabi64-gcc supports -c -o file.o... (cached) yes checking whether the mips64el-linux-gnuabi64-gcc linker (/usr/mips64el-linux-gnuabi64/bin/ld -m elf64ltsmip) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... mips64el-linux-gnuabi64-g++ -E checking for ld used by mips64el-linux-gnuabi64-g++... /usr/mips64el-linux-gnuabi64/bin/ld -m elf64ltsmip checking if the linker (/usr/mips64el-linux-gnuabi64/bin/ld -m elf64ltsmip) is GNU ld... yes checking whether the mips64el-linux-gnuabi64-g++ linker (/usr/mips64el-linux-gnuabi64/bin/ld -m elf64ltsmip) supports shared libraries... yes checking for mips64el-linux-gnuabi64-g++ option to produce PIC... -fPIC -DPIC checking if mips64el-linux-gnuabi64-g++ PIC flag -fPIC -DPIC works... yes checking if mips64el-linux-gnuabi64-g++ static flag -static works... yes checking if mips64el-linux-gnuabi64-g++ supports -c -o file.o... yes checking if mips64el-linux-gnuabi64-g++ supports -c -o file.o... (cached) yes checking whether the mips64el-linux-gnuabi64-g++ linker (/usr/mips64el-linux-gnuabi64/bin/ld -m elf64ltsmip) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ANSI C header files... (cached) yes checking for mips64el-linux-gnuabi64-doxygen... no checking for doxygen... no configure: WARNING: doxygen not found - will not generate any doxygen documentation checking for mips64el-linux-gnuabi64-perl... no checking for perl... /usr/bin/perl configure: WARNING: using cross tools not prefixed with host triplet checking for an ANSI C-conforming const... yes checking for inline... inline checking whether time.h and sys/time.h may both be included... yes checking whether mips64el-linux-gnuabi64-gcc needs -traditional... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating libMUSCLE/Makefile config.status: creating libMUSCLE.pc config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build -a make -j1 make[1]: Entering directory '/<>' Making all in libMUSCLE make[2]: Entering directory '/<>/libMUSCLE' mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o main.o main.cpp /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-aligngivenpath.lo `test -f 'aligngivenpath.cpp' || echo './'`aligngivenpath.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c aligngivenpath.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-aligngivenpath.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c aligngivenpath.cpp -o libMUSCLE_la-aligngivenpath.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-aligngivenpathsw.lo `test -f 'aligngivenpathsw.cpp' || echo './'`aligngivenpathsw.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c aligngivenpathsw.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-aligngivenpathsw.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c aligngivenpathsw.cpp -o libMUSCLE_la-aligngivenpathsw.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-aligntwomsas.lo `test -f 'aligntwomsas.cpp' || echo './'`aligntwomsas.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c aligntwomsas.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-aligntwomsas.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 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-DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c aligntwoprofs.cpp -o libMUSCLE_la-aligntwoprofs.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-aln.lo `test -f 'aln.cpp' || echo './'`aln.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c aln.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-aln.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c aln.cpp -o libMUSCLE_la-aln.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-alpha.lo `test -f 'alpha.cpp' || echo './'`alpha.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 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-DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c anchoredpp.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-anchoredpp.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c anchoredpp.cpp -o libMUSCLE_la-anchoredpp.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-anchors.lo `test -f 'anchors.cpp' || echo './'`anchors.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c anchors.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-anchors.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c anchors.cpp -o libMUSCLE_la-anchors.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-bittraceback.lo `test -f 'bittraceback.cpp' || echo './'`bittraceback.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c bittraceback.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-bittraceback.o bittraceback.cpp: In function ‘const char* muscle::BitsToStr(char)’: bittraceback.cpp:20:29: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 20 | static TLSstr Str("xM xD xI"); | ^~~~~~~~~~ libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c bittraceback.cpp -o libMUSCLE_la-bittraceback.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-blosumla.lo `test -f 'blosumla.cpp' || echo './'`blosumla.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c blosumla.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-blosumla.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. 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'clust.cpp' || echo './'`clust.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c clust.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-clust.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 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mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c cluster.cpp -o libMUSCLE_la-cluster.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 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-Werror=format-security -c -o libMUSCLE_la-diaglist.lo `test -f 'diaglist.cpp' || echo './'`diaglist.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c diaglist.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-diaglist.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" 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libMUSCLE_la-difftreese.lo `test -f 'difftreese.cpp' || echo './'`difftreese.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c difftreese.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-difftreese.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 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.libs/libMUSCLE_la-distcalc.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c distcalc.cpp -o libMUSCLE_la-distcalc.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 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libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c domuscle.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-domuscle.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 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-DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c fastdistkbit.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-fastdistkbit.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 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-DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c glbalignsp.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-glbalignsp.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 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-DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-gonnet.lo `test -f 'gonnet.cpp' || echo './'`gonnet.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 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-DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c gotowt.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-gotowt.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 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libMUSCLE_la-henikoffweight.lo `test -f 'henikoffweight.cpp' || echo './'`henikoffweight.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c henikoffweight.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-henikoffweight.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" 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-DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c hydro.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-hydro.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" 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-o libMUSCLE_la-intmath.lo `test -f 'intmath.cpp' || echo './'`intmath.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c intmath.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-intmath.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 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libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c local.cpp -o libMUSCLE_la-local.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 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`test -f 'msf.cpp' || echo './'`msf.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c msf.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-msf.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 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-D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c onexception.cpp -o libMUSCLE_la-onexception.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-options.lo `test -f 'options.cpp' || echo './'`options.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c options.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-options.o options.cpp:19:2: warning: #warning "Command-line option value storage is not OpenMP safe yet" [-Wcpp] 19 | #warning "Command-line option value storage is not OpenMP safe yet" | ^~~~~~~ libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c options.cpp -o libMUSCLE_la-options.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 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-fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c outweights.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-outweights.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c outweights.cpp -o libMUSCLE_la-outweights.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-pam200mafft.lo `test -f 'pam200mafft.cpp' || echo './'`pam200mafft.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c pam200mafft.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-pam200mafft.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c pam200mafft.cpp -o libMUSCLE_la-pam200mafft.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-params.lo `test -f 'params.cpp' || echo './'`params.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c params.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-params.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 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-fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-phy2.lo `test -f 'phy2.cpp' || echo './'`phy2.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c phy2.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-phy2.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c phy2.cpp -o libMUSCLE_la-phy2.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-phy3.lo `test -f 'phy3.cpp' || echo './'`phy3.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c phy3.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-phy3.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c phy3.cpp -o libMUSCLE_la-phy3.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 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-DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c posgap.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-posgap.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" 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-o libMUSCLE_la-ppscore.lo `test -f 'ppscore.cpp' || echo './'`ppscore.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ppscore.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-ppscore.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 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.libs/libMUSCLE_la-profdb.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c profdb.cpp -o libMUSCLE_la-profdb.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-profile.lo `test -f 'profile.cpp' || echo './'`profile.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time 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--mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-profilefrommsa.lo `test -f 'profilefrommsa.cpp' || echo './'`profilefrommsa.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c profilefrommsa.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-profilefrommsa.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 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'./'`progalign.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c progalign.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-progalign.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 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-funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-progress.lo `test -f 'progress.cpp' || echo './'`progress.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c progress.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-progress.o progress.cpp:11:2: warning: #warning "progress indicators have not been made parallel-safe yet" [-Wcpp] 11 | #warning "progress indicators have not been made parallel-safe yet" | ^~~~~~~ libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c progress.cpp -o libMUSCLE_la-progress.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-progressivealign.lo `test -f 'progressivealign.cpp' || echo './'`progressivealign.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 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-O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c progressivealign.cpp -o libMUSCLE_la-progressivealign.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-pwpath.lo `test -f 'pwpath.cpp' || echo './'`pwpath.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c pwpath.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-pwpath.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 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-fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-readmx.lo `test -f 'readmx.cpp' || echo './'`readmx.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c readmx.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-readmx.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" 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-DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c refine.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-refine.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c refine.cpp -o libMUSCLE_la-refine.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-refinehoriz.lo `test -f 'refinehoriz.cpp' || echo './'`refinehoriz.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c refinehoriz.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-refinehoriz.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c refinehoriz.cpp -o libMUSCLE_la-refinehoriz.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 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refinesubfams.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-refinesubfams.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c refinesubfams.cpp -o libMUSCLE_la-refinesubfams.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" 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-DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c scoregaps.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-scoregaps.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c scoregaps.cpp -o libMUSCLE_la-scoregaps.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-scorehistory.lo `test -f 'scorehistory.cpp' || echo './'`scorehistory.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c scorehistory.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-scorehistory.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 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-DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-scorepp.lo `test -f 'scorepp.cpp' || echo './'`scorepp.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c scorepp.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-scorepp.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c scorepp.cpp -o libMUSCLE_la-scorepp.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 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seqvect.cpp -o libMUSCLE_la-seqvect.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-setblosumweights.lo `test -f 'setblosumweights.cpp' || echo './'`setblosumweights.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" 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-DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-setnewhandler.lo `test -f 'setnewhandler.cpp' || echo './'`setnewhandler.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c setnewhandler.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-setnewhandler.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c setnewhandler.cpp -o libMUSCLE_la-setnewhandler.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-spfast.lo `test -f 'spfast.cpp' || echo './'`spfast.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c spfast.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-spfast.o spfast.cpp: In function ‘char* muscle::GapTypeToStr(int)’: spfast.cpp:20:18: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 20 | case LL: return "LL"; | ^~~~ spfast.cpp:21:18: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 21 | case LG: return "LG"; | ^~~~ spfast.cpp:22:18: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 22 | case GL: return "GL"; | ^~~~ spfast.cpp:23:18: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 23 | case GG: return "GG"; | ^~~~ spfast.cpp:26:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 26 | return "?"; | ^~~ libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c spfast.cpp -o libMUSCLE_la-spfast.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-sptest.lo `test -f 'sptest.cpp' || echo './'`sptest.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c sptest.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-sptest.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c sptest.cpp -o libMUSCLE_la-sptest.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-stabilize.lo `test -f 'stabilize.cpp' || echo './'`stabilize.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c stabilize.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-stabilize.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c stabilize.cpp -o libMUSCLE_la-stabilize.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-subfam.lo `test -f 'subfam.cpp' || echo './'`subfam.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c subfam.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-subfam.o subfam.cpp: In function ‘void muscle::AlignSubFam(muscle::SeqVect&, const muscle::Tree&, unsigned int, muscle::MSA&)’: subfam.cpp:175:8: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 175 | system(CmdLine); | ~~~~~~^~~~~~~~~ libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c subfam.cpp -o libMUSCLE_la-subfam.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-subfams.lo `test -f 'subfams.cpp' || echo './'`subfams.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c subfams.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-subfams.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c subfams.cpp -o libMUSCLE_la-subfams.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-sw.lo `test -f 'sw.cpp' || echo './'`sw.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c sw.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-sw.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c sw.cpp -o libMUSCLE_la-sw.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-termgaps.lo `test -f 'termgaps.cpp' || echo './'`termgaps.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" 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-DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-treefrommsa.lo `test -f 'treefrommsa.cpp' || echo './'`treefrommsa.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c treefrommsa.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-treefrommsa.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c treefrommsa.cpp -o libMUSCLE_la-treefrommsa.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-typetostr.lo `test -f 'typetostr.cpp' || echo './'`typetostr.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c typetostr.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-typetostr.o typetostr.cpp: In function ‘const char* muscle::SecsToStr(long unsigned int)’: typetostr.cpp:15:25: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘long int’ [-Wformat=] 15 | sprintf(Str.get(), "%02d:%02d:%02d", hh, mm, ss); | ~~~^ ~~ | | | | int long int | %02ld typetostr.cpp:15:30: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long int’ [-Wformat=] 15 | sprintf(Str.get(), "%02d:%02d:%02d", hh, mm, ss); | ~~~^ ~~ | | | | int long int | %02ld typetostr.cpp:15:35: warning: format ‘%d’ expects argument of type ‘int’, but argument 5 has type ‘long int’ [-Wformat=] 15 | sprintf(Str.get(), "%02d:%02d:%02d", hh, mm, ss); | ~~~^ ~~ | | | | int long int | %02ld libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c typetostr.cpp -o libMUSCLE_la-typetostr.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-upgma2.lo `test -f 'upgma2.cpp' || echo './'`upgma2.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c upgma2.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-upgma2.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c upgma2.cpp -o libMUSCLE_la-upgma2.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-usage.lo `test -f 'usage.cpp' || echo './'`usage.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c usage.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-usage.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c usage.cpp -o libMUSCLE_la-usage.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-validateids.lo `test -f 'validateids.cpp' || echo './'`validateids.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c validateids.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-validateids.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c validateids.cpp -o libMUSCLE_la-validateids.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-vtml2.lo `test -f 'vtml2.cpp' || echo './'`vtml2.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c vtml2.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-vtml2.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c vtml2.cpp -o libMUSCLE_la-vtml2.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libMUSCLE_la-writescorefile.lo `test -f 'writescorefile.cpp' || echo './'`writescorefile.cpp libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c writescorefile.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-writescorefile.o libtool: compile: mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSTDC_HEADERS=1 -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c writescorefile.cpp -o libMUSCLE_la-writescorefile.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mips64el-linux-gnuabi64-g++ 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libMUSCLE_la-profilefrommsa.lo libMUSCLE_la-progalign.lo libMUSCLE_la-progress.lo libMUSCLE_la-progressivealign.lo libMUSCLE_la-pwpath.lo libMUSCLE_la-readmx.lo libMUSCLE_la-realigndiffs.lo libMUSCLE_la-realigndiffse.lo libMUSCLE_la-refine.lo libMUSCLE_la-refinehoriz.lo libMUSCLE_la-refinesubfams.lo libMUSCLE_la-refinetree.lo libMUSCLE_la-refinetreee.lo libMUSCLE_la-refinevert.lo libMUSCLE_la-refinew.lo libMUSCLE_la-savebest.lo libMUSCLE_la-scoregaps.lo libMUSCLE_la-scorehistory.lo libMUSCLE_la-scorepp.lo libMUSCLE_la-seq.lo libMUSCLE_la-seqvect.lo libMUSCLE_la-setblosumweights.lo libMUSCLE_la-setgscweights.lo libMUSCLE_la-setnewhandler.lo libMUSCLE_la-spfast.lo libMUSCLE_la-sptest.lo libMUSCLE_la-stabilize.lo libMUSCLE_la-subfam.lo libMUSCLE_la-subfams.lo libMUSCLE_la-sw.lo libMUSCLE_la-termgaps.lo libMUSCLE_la-textfile.lo libMUSCLE_la-threewaywt.lo libMUSCLE_la-traceback.lo libMUSCLE_la-tracebackopt.lo libMUSCLE_la-tracebacksw.lo libMUSCLE_la-treefrommsa.lo libMUSCLE_la-typetostr.lo libMUSCLE_la-upgma2.lo libMUSCLE_la-usage.lo libMUSCLE_la-validateids.lo libMUSCLE_la-vtml2.lo libMUSCLE_la-writescorefile.lo libMUSCLE_la-blosum62.lo libMUSCLE_la-globalsother.lo libMUSCLE_la-maketree.lo libMUSCLE_la-scoredist.lo libMUSCLE_la-tomhydro.lo libtool: link: mips64el-linux-gnuabi64-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc-cross/mips64el-linux-gnuabi64/10/../../../../mips64el-linux-gnuabi64/lib/../lib/crti.o /usr/lib/gcc-cross/mips64el-linux-gnuabi64/10/crtbeginS.o .libs/libMUSCLE_la-aligngivenpath.o .libs/libMUSCLE_la-aligngivenpathsw.o .libs/libMUSCLE_la-aligntwomsas.o .libs/libMUSCLE_la-aligntwoprofs.o .libs/libMUSCLE_la-aln.o .libs/libMUSCLE_la-alpha.o .libs/libMUSCLE_la-anchoredpp.o .libs/libMUSCLE_la-anchors.o .libs/libMUSCLE_la-bittraceback.o .libs/libMUSCLE_la-blosumla.o .libs/libMUSCLE_la-clust.o .libs/libMUSCLE_la-cluster.o .libs/libMUSCLE_la-clwwt.o .libs/libMUSCLE_la-color.o .libs/libMUSCLE_la-cons.o .libs/libMUSCLE_la-diaglist.o .libs/libMUSCLE_la-diffobjscore.o .libs/libMUSCLE_la-diffpaths.o .libs/libMUSCLE_la-difftrees.o .libs/libMUSCLE_la-difftreese.o .libs/libMUSCLE_la-distcalc.o .libs/libMUSCLE_la-distfunc.o .libs/libMUSCLE_la-distpwkimura.o .libs/libMUSCLE_la-domuscle.o .libs/libMUSCLE_la-dosp.o .libs/libMUSCLE_la-dpreglist.o .libs/libMUSCLE_la-drawtree.o .libs/libMUSCLE_la-edgelist.o .libs/libMUSCLE_la-enumopts.o .libs/libMUSCLE_la-enumtostr.o .libs/libMUSCLE_la-estring.o .libs/libMUSCLE_la-fasta2.o .libs/libMUSCLE_la-fasta.o .libs/libMUSCLE_la-fastclust.o .libs/libMUSCLE_la-fastdist.o .libs/libMUSCLE_la-fastdistjones.o .libs/libMUSCLE_la-fastdistkbit.o .libs/libMUSCLE_la-fastdistkmer.o .libs/libMUSCLE_la-fastdistmafft.o .libs/libMUSCLE_la-fastdistnuc.o .libs/libMUSCLE_la-fastscorepath2.o .libs/libMUSCLE_la-finddiags.o .libs/libMUSCLE_la-finddiagsn.o .libs/libMUSCLE_la-glbalign352.o .libs/libMUSCLE_la-glbalign.o .libs/libMUSCLE_la-glbaligndiag.o .libs/libMUSCLE_la-glbalignle.o .libs/libMUSCLE_la-glbalignsimple.o .libs/libMUSCLE_la-glbalignsp.o .libs/libMUSCLE_la-glbalignspn.o .libs/libMUSCLE_la-glbalignss.o .libs/libMUSCLE_la-glbalndimer.o .libs/libMUSCLE_la-globals.o .libs/libMUSCLE_la-globalslinux.o .libs/libMUSCLE_la-globalswin32.o .libs/libMUSCLE_la-gonnet.o .libs/libMUSCLE_la-gotowt.o .libs/libMUSCLE_la-henikoffweight.o .libs/libMUSCLE_la-henikoffweightpb.o .libs/libMUSCLE_la-html.o .libs/libMUSCLE_la-hydro.o .libs/libMUSCLE_la-intmath.o .libs/libMUSCLE_la-local.o .libs/libMUSCLE_la-makerootmsab.o .libs/libMUSCLE_la-makerootmsa.o .libs/libMUSCLE_la-mhack.o .libs/libMUSCLE_la-mpam200.o .libs/libMUSCLE_la-msa2.o .libs/libMUSCLE_la-msa.o .libs/libMUSCLE_la-msadistkimura.o .libs/libMUSCLE_la-msf.o .libs/libMUSCLE_la-muscle.o .libs/libMUSCLE_la-muscleout.o .libs/libMUSCLE_la-nucmx.o .libs/libMUSCLE_la-nwdasimple2.o .libs/libMUSCLE_la-nwdasimple.o .libs/libMUSCLE_la-nwdasmall.o .libs/libMUSCLE_la-nwrec.o .libs/libMUSCLE_la-nwsmall.o .libs/libMUSCLE_la-objscore2.o .libs/libMUSCLE_la-objscore.o .libs/libMUSCLE_la-objscoreda.o .libs/libMUSCLE_la-onexception.o .libs/libMUSCLE_la-options.o .libs/libMUSCLE_la-outweights.o .libs/libMUSCLE_la-pam200mafft.o .libs/libMUSCLE_la-params.o .libs/libMUSCLE_la-phy2.o .libs/libMUSCLE_la-phy3.o .libs/libMUSCLE_la-phy4.o .libs/libMUSCLE_la-phy.o .libs/libMUSCLE_la-phyfromclust.o .libs/libMUSCLE_la-phyfromfile.o .libs/libMUSCLE_la-physeq.o .libs/libMUSCLE_la-phytofile.o .libs/libMUSCLE_la-posgap.o .libs/libMUSCLE_la-ppscore.o .libs/libMUSCLE_la-profdb.o .libs/libMUSCLE_la-profile.o .libs/libMUSCLE_la-profilefrommsa.o .libs/libMUSCLE_la-progalign.o .libs/libMUSCLE_la-progress.o .libs/libMUSCLE_la-progressivealign.o .libs/libMUSCLE_la-pwpath.o .libs/libMUSCLE_la-readmx.o .libs/libMUSCLE_la-realigndiffs.o .libs/libMUSCLE_la-realigndiffse.o .libs/libMUSCLE_la-refine.o .libs/libMUSCLE_la-refinehoriz.o .libs/libMUSCLE_la-refinesubfams.o .libs/libMUSCLE_la-refinetree.o .libs/libMUSCLE_la-refinetreee.o .libs/libMUSCLE_la-refinevert.o .libs/libMUSCLE_la-refinew.o .libs/libMUSCLE_la-savebest.o .libs/libMUSCLE_la-scoregaps.o .libs/libMUSCLE_la-scorehistory.o .libs/libMUSCLE_la-scorepp.o .libs/libMUSCLE_la-seq.o .libs/libMUSCLE_la-seqvect.o .libs/libMUSCLE_la-setblosumweights.o .libs/libMUSCLE_la-setgscweights.o .libs/libMUSCLE_la-setnewhandler.o .libs/libMUSCLE_la-spfast.o .libs/libMUSCLE_la-sptest.o .libs/libMUSCLE_la-stabilize.o .libs/libMUSCLE_la-subfam.o .libs/libMUSCLE_la-subfams.o .libs/libMUSCLE_la-sw.o .libs/libMUSCLE_la-termgaps.o .libs/libMUSCLE_la-textfile.o .libs/libMUSCLE_la-threewaywt.o .libs/libMUSCLE_la-traceback.o .libs/libMUSCLE_la-tracebackopt.o .libs/libMUSCLE_la-tracebacksw.o .libs/libMUSCLE_la-treefrommsa.o .libs/libMUSCLE_la-typetostr.o .libs/libMUSCLE_la-upgma2.o .libs/libMUSCLE_la-usage.o .libs/libMUSCLE_la-validateids.o .libs/libMUSCLE_la-vtml2.o .libs/libMUSCLE_la-writescorefile.o .libs/libMUSCLE_la-blosum62.o .libs/libMUSCLE_la-globalsother.o .libs/libMUSCLE_la-maketree.o .libs/libMUSCLE_la-scoredist.o .libs/libMUSCLE_la-tomhydro.o -L/usr/lib/gcc-cross/mips64el-linux-gnuabi64/10 -L/usr/lib/gcc-cross/mips64el-linux-gnuabi64/10/../../../../mips64el-linux-gnuabi64/lib/../lib -L/lib/mips64el-linux-gnuabi64 -L/lib/../lib -L/usr/lib/mips64el-linux-gnuabi64 -L/usr/lib/../lib -L/usr/lib/gcc-cross/mips64el-linux-gnuabi64/10/../../../../mips64el-linux-gnuabi64/lib -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc-cross/mips64el-linux-gnuabi64/10/crtendS.o /usr/lib/gcc-cross/mips64el-linux-gnuabi64/10/../../../../mips64el-linux-gnuabi64/lib/../lib/crtn.o -O2 -fopenmp -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -fopenmp -Wl,-soname -Wl,libMUSCLE.so.1 -o .libs/libMUSCLE.so.1.0.0 libtool: link: (cd ".libs" && rm -f "libMUSCLE.so.1" && ln -s "libMUSCLE.so.1.0.0" "libMUSCLE.so.1") libtool: link: (cd ".libs" && rm -f "libMUSCLE.so" && ln -s "libMUSCLE.so.1.0.0" "libMUSCLE.so") libtool: link: mips64el-linux-gnuabi64-ar cr .libs/libMUSCLE.a libMUSCLE_la-aligngivenpath.o libMUSCLE_la-aligngivenpathsw.o libMUSCLE_la-aligntwomsas.o libMUSCLE_la-aligntwoprofs.o libMUSCLE_la-aln.o libMUSCLE_la-alpha.o libMUSCLE_la-anchoredpp.o libMUSCLE_la-anchors.o libMUSCLE_la-bittraceback.o libMUSCLE_la-blosumla.o libMUSCLE_la-clust.o libMUSCLE_la-cluster.o libMUSCLE_la-clwwt.o libMUSCLE_la-color.o libMUSCLE_la-cons.o libMUSCLE_la-diaglist.o libMUSCLE_la-diffobjscore.o libMUSCLE_la-diffpaths.o libMUSCLE_la-difftrees.o libMUSCLE_la-difftreese.o libMUSCLE_la-distcalc.o libMUSCLE_la-distfunc.o libMUSCLE_la-distpwkimura.o libMUSCLE_la-domuscle.o libMUSCLE_la-dosp.o libMUSCLE_la-dpreglist.o libMUSCLE_la-drawtree.o libMUSCLE_la-edgelist.o libMUSCLE_la-enumopts.o libMUSCLE_la-enumtostr.o libMUSCLE_la-estring.o libMUSCLE_la-fasta2.o libMUSCLE_la-fasta.o libMUSCLE_la-fastclust.o libMUSCLE_la-fastdist.o libMUSCLE_la-fastdistjones.o libMUSCLE_la-fastdistkbit.o libMUSCLE_la-fastdistkmer.o libMUSCLE_la-fastdistmafft.o libMUSCLE_la-fastdistnuc.o libMUSCLE_la-fastscorepath2.o libMUSCLE_la-finddiags.o libMUSCLE_la-finddiagsn.o libMUSCLE_la-glbalign352.o libMUSCLE_la-glbalign.o libMUSCLE_la-glbaligndiag.o libMUSCLE_la-glbalignle.o libMUSCLE_la-glbalignsimple.o libMUSCLE_la-glbalignsp.o libMUSCLE_la-glbalignspn.o libMUSCLE_la-glbalignss.o libMUSCLE_la-glbalndimer.o libMUSCLE_la-globals.o libMUSCLE_la-globalslinux.o libMUSCLE_la-globalswin32.o libMUSCLE_la-gonnet.o libMUSCLE_la-gotowt.o libMUSCLE_la-henikoffweight.o libMUSCLE_la-henikoffweightpb.o libMUSCLE_la-html.o libMUSCLE_la-hydro.o libMUSCLE_la-intmath.o libMUSCLE_la-local.o libMUSCLE_la-makerootmsab.o libMUSCLE_la-makerootmsa.o libMUSCLE_la-mhack.o libMUSCLE_la-mpam200.o libMUSCLE_la-msa2.o libMUSCLE_la-msa.o libMUSCLE_la-msadistkimura.o libMUSCLE_la-msf.o libMUSCLE_la-muscle.o libMUSCLE_la-muscleout.o libMUSCLE_la-nucmx.o libMUSCLE_la-nwdasimple2.o libMUSCLE_la-nwdasimple.o libMUSCLE_la-nwdasmall.o libMUSCLE_la-nwrec.o libMUSCLE_la-nwsmall.o libMUSCLE_la-objscore2.o libMUSCLE_la-objscore.o libMUSCLE_la-objscoreda.o libMUSCLE_la-onexception.o libMUSCLE_la-options.o libMUSCLE_la-outweights.o libMUSCLE_la-pam200mafft.o libMUSCLE_la-params.o libMUSCLE_la-phy2.o libMUSCLE_la-phy3.o libMUSCLE_la-phy4.o libMUSCLE_la-phy.o libMUSCLE_la-phyfromclust.o libMUSCLE_la-phyfromfile.o libMUSCLE_la-physeq.o libMUSCLE_la-phytofile.o libMUSCLE_la-posgap.o libMUSCLE_la-ppscore.o libMUSCLE_la-profdb.o libMUSCLE_la-profile.o libMUSCLE_la-profilefrommsa.o libMUSCLE_la-progalign.o libMUSCLE_la-progress.o libMUSCLE_la-progressivealign.o libMUSCLE_la-pwpath.o libMUSCLE_la-readmx.o libMUSCLE_la-realigndiffs.o libMUSCLE_la-realigndiffse.o libMUSCLE_la-refine.o libMUSCLE_la-refinehoriz.o libMUSCLE_la-refinesubfams.o libMUSCLE_la-refinetree.o libMUSCLE_la-refinetreee.o libMUSCLE_la-refinevert.o libMUSCLE_la-refinew.o libMUSCLE_la-savebest.o libMUSCLE_la-scoregaps.o libMUSCLE_la-scorehistory.o libMUSCLE_la-scorepp.o libMUSCLE_la-seq.o libMUSCLE_la-seqvect.o libMUSCLE_la-setblosumweights.o libMUSCLE_la-setgscweights.o libMUSCLE_la-setnewhandler.o libMUSCLE_la-spfast.o libMUSCLE_la-sptest.o libMUSCLE_la-stabilize.o libMUSCLE_la-subfam.o libMUSCLE_la-subfams.o libMUSCLE_la-sw.o libMUSCLE_la-termgaps.o libMUSCLE_la-textfile.o libMUSCLE_la-threewaywt.o libMUSCLE_la-traceback.o libMUSCLE_la-tracebackopt.o libMUSCLE_la-tracebacksw.o libMUSCLE_la-treefrommsa.o libMUSCLE_la-typetostr.o libMUSCLE_la-upgma2.o libMUSCLE_la-usage.o libMUSCLE_la-validateids.o libMUSCLE_la-vtml2.o libMUSCLE_la-writescorefile.o libMUSCLE_la-blosum62.o libMUSCLE_la-globalsother.o libMUSCLE_la-maketree.o libMUSCLE_la-scoredist.o libMUSCLE_la-tomhydro.o libtool: link: mips64el-linux-gnuabi64-ranlib .libs/libMUSCLE.a libtool: link: ( cd ".libs" && rm -f "libMUSCLE.la" && ln -s "../libMUSCLE.la" "libMUSCLE.la" ) /bin/bash ../libtool --tag=CXX --mode=link mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -Wl,-z,relro -Wl,-z,now -o muscle main.o libMUSCLE.la libtool: link: mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/muscle main.o ./.libs/libMUSCLE.so -fopenmp make[2]: Leaving directory '/<>/libMUSCLE' make[2]: Entering directory '/<>' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/libmuscle-3.7\+4565/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in libMUSCLE make[2]: Entering directory '/<>/libMUSCLE' make[3]: Entering directory '/<>/libMUSCLE' /bin/mkdir -p '/<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64' /bin/bash ../libtool --mode=install /usr/bin/install -c libMUSCLE.la '/<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/libMUSCLE.so.1.0.0 /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libMUSCLE.so.1.0.0 libtool: install: (cd /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64 && { ln -s -f libMUSCLE.so.1.0.0 libMUSCLE.so.1 || { rm -f libMUSCLE.so.1 && ln -s libMUSCLE.so.1.0.0 libMUSCLE.so.1; }; }) libtool: install: (cd /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64 && { ln -s -f libMUSCLE.so.1.0.0 libMUSCLE.so || { rm -f libMUSCLE.so && ln -s libMUSCLE.so.1.0.0 libMUSCLE.so; }; }) libtool: install: /usr/bin/install -c .libs/libMUSCLE.lai /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libMUSCLE.la libtool: install: /usr/bin/install -c .libs/libMUSCLE.a /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libMUSCLE.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libMUSCLE.a libtool: install: mips64el-linux-gnuabi64-ranlib /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libMUSCLE.a libtool: warning: remember to run 'libtool --finish /usr/lib/mips64el-linux-gnuabi64' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c muscle '/<>/debian/tmp/usr/bin' libtool: warning: 'libMUSCLE.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/muscle /<>/debian/tmp/usr/bin/muscle /bin/mkdir -p '/<>/debian/tmp/usr/include/libMUSCLE' /usr/bin/install -c -m 644 alpha.h cluster.h clust.h clustsetdf.h clustset.h clustsetmsa.h diaglist.h distcalc.h distfunc.h dpregionlist.h dpreglist.h edgelist.h enumopts.h enums.h estring.h gapscoredimer.h gonnet.h intmath.h msadist.h msa.h muscle.h objscore.h params.h profile.h pwpath.h refine.h scorehistory.h seq.h seqvect.h textfile.h timing.h tree.h types.h unixio.h threadstorage.h '/<>/debian/tmp/usr/include/libMUSCLE' make[3]: Leaving directory '/<>/libMUSCLE' make[2]: Leaving directory '/<>/libMUSCLE' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/pkgconfig' /usr/bin/install -c -m 644 libMUSCLE.pc '/<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/pkgconfig' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/tmp/usr/include/* usr/include \ --movedev "debian/tmp/usr/lib/*/pkgconfig/*.pc" usr/lib/mips64el-linux-gnuabi64/pkgconfig \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility set -e install -d -m 755 debian/libmuscle-dev/usr/lib/mips64el-linux-gnuabi64 install -d -m 755 debian/libmuscle1/usr/lib/mips64el-linux-gnuabi64 mv debian/tmp/usr/lib/mips64el-linux-gnuabi64/libMUSCLE.a debian/libmuscle-dev/usr/lib/mips64el-linux-gnuabi64 mv debian/tmp/usr/lib/mips64el-linux-gnuabi64/libMUSCLE.so debian/libmuscle-dev/usr/lib/mips64el-linux-gnuabi64 mv /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libMUSCLE.so.1 debian/libmuscle1/usr/lib/mips64el-linux-gnuabi64 mv /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libMUSCLE.so.1.0.0 debian/libmuscle1/usr/lib/mips64el-linux-gnuabi64 PKGDEV=libmuscle-dev PKGSHL=libmuscle1 install -d -m 755 debian/libmuscle-dev/usr/include mv debian/tmp/usr/include/libMUSCLE debian/libmuscle-dev/usr/include install -d -m 755 debian/libmuscle-dev/usr/lib/mips64el-linux-gnuabi64/pkgconfig mv debian/tmp/usr/lib/*/pkgconfig/*.pc debian/libmuscle-dev/usr/lib/mips64el-linux-gnuabi64/pkgconfig dh_link -plibmuscle1 usr/lib/mips64el-linux-gnuabi64/libMUSCLE.so.1 usr/lib/mips64el-linux-gnuabi64/libMUSCLE-3.7.so.1 find debian -name "lib*.la" -delete # The binary is taken rather from the package muscle rm -rf debian/tmp/usr/bin/muscle make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_lintian -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a -a dh_strip -a -a dh_makeshlibs -a -a dpkg-gensymbols: warning: some new symbols appeared in the symbols file: see diff output below dpkg-gensymbols: warning: debian/libmuscle1/DEBIAN/symbols doesn't match completely debian/libmuscle1.symbols --- debian/libmuscle1.symbols (libmuscle1_3.7+4565-7_mips64el) +++ dpkg-gensymbolscyZZFG 2020-12-05 16:22:42.251923272 +0000 @@ -838,8 +838,11 @@ _ZNK6muscle8EdgeList5LogMeEv@Base 3.7+4565 _ZNK6muscle8EdgeList7GetEdgeEjPjS1_@Base 3.7+4565 _ZNK6muscle8EdgeList8GetCountEv@Base 3.7+4565 + _ZNSt12_Vector_baseIcSaIcEED1Ev@Base 3.7+4565-7 + _ZNSt12_Vector_baseIcSaIcEED2Ev@Base 3.7+4565-7 _ZNSt6vectorIPN6muscle3SeqESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 3.7+4565 (optional)_ZNSt6vectorIcSaIcEE17_M_realloc_insertIJRKcEEEvN9__gnu_cxx17__normal_iteratorIPcS1_EEDpOT_@Base 3.7+4565 + _ZNSt6vectorIcSaIcEE17_M_realloc_insertIJcEEEvN9__gnu_cxx17__normal_iteratorIPcS1_EEDpOT_@Base 3.7+4565-7 (optional)_ZNSt6vectorIcSaIcEE8_M_eraseEN9__gnu_cxx17__normal_iteratorIPcS1_EE@Base 3.7+4565 (arch-bits=32)_ZNSt6vectorIjSaIjEE17_M_realloc_insertIJRKjEEEvN9__gnu_cxx17__normal_iteratorIPjS1_EEDpOT_@Base 3.7+4565 (arch-bits=64)_ZNSt6vectorImSaImEE17_M_realloc_insertIJRKmEEEvN9__gnu_cxx17__normal_iteratorIPmS1_EEDpOT_@Base 3.7+4565 dh_shlibdeps -a -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'libmuscle-dev' in '../libmuscle-dev_3.7+4565-7_mips64el.deb'. dpkg-deb: building package 'libmuscle1' in '../libmuscle1_3.7+4565-7_mips64el.deb'. dpkg-deb: building package 'libmuscle1-dbgsym' in '../libmuscle1-dbgsym_3.7+4565-7_mips64el.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../libmuscle_3.7+4565-7_mips64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-12-05T16:22:46Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libmuscle_3.7+4565-7_mips64el.changes: -------------------------------------- Format: 1.8 Date: Mon, 16 Nov 2020 20:06:36 +0100 Source: libmuscle Binary: libmuscle-dev libmuscle1 libmuscle1-dbgsym Built-For-Profiles: cross nocheck Architecture: mips64el Version: 3.7+4565-7 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: libmuscle-dev - multiple alignment development library for protein sequences libmuscle1 - multiple alignment library for protein sequences Changes: libmuscle (3.7+4565-7) unstable; urgency=medium . * Standards-Version: 4.5.0 (routine-update) * debhelper-compat 13 (routine-update) * Secure URI in copyright format (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Trim trailing whitespace. * Remove *.la file and usr/bin/muscle to enable dh_missing --fail-missing * Fix lintian override Checksums-Sha1: 3e4faee135a278a7f54890c417cb3511f8f99b0e 341796 libmuscle-dev_3.7+4565-7_mips64el.deb 06dd2386a8609e193e9d79de554d37407ad91b76 879420 libmuscle1-dbgsym_3.7+4565-7_mips64el.deb 53b7fda6e3f29d88c61de28cee0739bd99248dc3 235424 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+------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: libmuscle Binary: libmuscle-dev libmuscle1 libmuscle1-dbgsym Architecture: mips64el Version: 3.7+4565-7 Checksums-Md5: e51eefd8564f1a17eb561370534001eb 341796 libmuscle-dev_3.7+4565-7_mips64el.deb 2b0f48056169f50af8814ef35f7f14cc 879420 libmuscle1-dbgsym_3.7+4565-7_mips64el.deb 608fa7e01638dd93f79757f58cd4c01d 235424 libmuscle1_3.7+4565-7_mips64el.deb Checksums-Sha1: 3e4faee135a278a7f54890c417cb3511f8f99b0e 341796 libmuscle-dev_3.7+4565-7_mips64el.deb 06dd2386a8609e193e9d79de554d37407ad91b76 879420 libmuscle1-dbgsym_3.7+4565-7_mips64el.deb 53b7fda6e3f29d88c61de28cee0739bd99248dc3 235424 libmuscle1_3.7+4565-7_mips64el.deb Checksums-Sha256: f3852ef9b1c80356d8f74e3e1a40120c60e695ec286cbdb406bd07787825696f 341796 libmuscle-dev_3.7+4565-7_mips64el.deb 0ee778471f40f97afb69018da1c00eb2e2ca4aa3e4998697aaa3b67253577999 879420 libmuscle1-dbgsym_3.7+4565-7_mips64el.deb 0de824c5a3ce04be4ce1bf4f3bdaea809847cd915befcdb8a107e9700af318fe 235424 libmuscle1_3.7+4565-7_mips64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sat, 05 Dec 2020 16:22:45 +0000 Build-Path: /<> Installed-Build-Depends: adduser (= 3.118), apt (= 2.1.12), autoconf (= 2.69-11.1), automake (= 1:1.16.3-1), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.48), bash (= 5.1~rc3-1), binutils (= 2.35.1-3), binutils-common (= 2.35.1-3), binutils-x86-64-linux-gnu (= 2.35.1-3), bsdextrautils (= 2.36.1-2), bsdutils (= 1:2.36.1-2), build-essential (= 12.8), bzip2 (= 1.0.8-4), coreutils (= 8.32-4+b1), cpp (= 4:10.2.0-1), cpp-10 (= 10.2.0-23), d-shlibs (= 0.96), dash (= 0.5.11+git20200708+dd9ef66-2), debconf (= 1.5.74), debhelper (= 13.2.1), debian-archive-keyring (= 2019.1), debianutils (= 4.11.2), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.9.0-1), diffutils (= 1:3.7-3), dpkg (= 1.20.5), dpkg-dev (= 1.20.5), dwz (= 0.13-5), file (= 1:5.39-3), findutils (= 4.7.0+git20201010-2), g++ (= 4:10.2.0-1), g++-10 (= 10.2.0-23), gcc (= 4:10.2.0-1), gcc-10 (= 10.2.0-23), gcc-10-base (= 10.2.0-23), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), gpgv (= 2.2.20-1), grep (= 3.6-1), groff-base (= 1.22.4-5), gzip (= 1.10-2), hostname (= 3.23), init-system-helpers (= 1.59), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libapt-pkg6.0 (= 2.1.12), libarchive-zip-perl (= 1.68-1), libasan6 (= 10.2.0-23), libatomic1 (= 10.2.0-23), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3.1), libaudit1 (= 1:2.8.5-3.1), libbinutils (= 2.35.1-3), libblkid1 (= 2.36.1-2), libbz2-1.0 (= 1.0.8-4), libc-bin (= 2.31-5), libc-dev-bin (= 2.31-5), libc6 (= 2.31-5), libc6-dev (= 2.31-5), libcap-ng0 (= 0.7.9-2.2+b1), libcc1-0 (= 10.2.0-23), libcom-err2 (= 1.45.6-1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.17-1), libcrypt1 (= 1:4.4.17-1), libctf-nobfd0 (= 2.35.1-3), libctf0 (= 2.35.1-3), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.255), libdebhelper-perl (= 13.2.1), libdpkg-perl (= 1.20.5), libelf1 (= 0.182-1), libffi7 (= 3.3-5), libfile-stripnondeterminism-perl (= 1.9.0-1), libgcc-10-dev (= 10.2.0-23), libgcc-s1 (= 10.2.0-23), libgcrypt20 (= 1.8.7-2), libgdbm-compat4 (= 1.18.1-5.1), libgdbm6 (= 1.18.1-5.1), libglib2.0-0 (= 2.66.3-2), libgmp10 (= 2:6.2.1+dfsg-1), libgnutls30 (= 3.6.15-4), libgomp1 (= 10.2.0-23), libgpg-error0 (= 1.38-2), libgssapi-krb5-2 (= 1.18.3-4), libhogweed6 (= 3.6-2), libicu67 (= 67.1-4), libidn2-0 (= 2.3.0-4), libisl23 (= 0.23-1), libitm1 (= 10.2.0-23), libk5crypto3 (= 1.18.3-4), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.18.3-4), libkrb5support0 (= 1.18.3-4), liblsan0 (= 10.2.0-23), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.39-3), libmagic1 (= 1:5.39-3), libmount1 (= 2.36.1-2), libmpc3 (= 1.2.0-1), libmpfr6 (= 4.1.0-3), libnettle8 (= 3.6-2), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libp11-kit0 (= 0.23.21-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.35-2), libpcre3 (= 2:8.39-13), libperl5.32 (= 5.32.0-5), libpipeline1 (= 1.5.3-1), libquadmath0 (= 10.2.0-23), libseccomp2 (= 2.5.0-3), libselinux1 (= 3.1-2+b1), libsemanage-common (= 3.1-1), libsemanage1 (= 3.1-1+b1), libsepol1 (= 3.1-1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.36.1-2), libssl1.1 (= 1.1.1h-1), libstdc++-10-dev (= 10.2.0-23), libstdc++6 (= 10.2.0-23), libsub-override-perl (= 0.09-2), libsystemd0 (= 247.1-3), libtasn1-6 (= 4.16.0-2), libtinfo6 (= 6.2+20201114-1), libtirpc-common (= 1.2.6-3), libtirpc-dev (= 1.2.6-3), libtirpc3 (= 1.2.6-3), libtool (= 2.4.6-14), libtsan0 (= 10.2.0-23), libubsan1 (= 10.2.0-23), libuchardet0 (= 0.0.7-1), libudev1 (= 247.1-3), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36.1-2), libxml2 (= 2.9.10+dfsg-6.3), libzstd1 (= 1.4.5+dfsg-4), linux-libc-dev (= 5.9.11-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.3-4), man-db (= 2.9.3-2), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2+20201114-1), ncurses-bin (= 6.2+20201114-1), passwd (= 1:4.8.1-1), patch (= 2.7.6-6), perl (= 5.32.0-5), perl-base (= 5.32.0-5), perl-modules-5.32 (= 5.32.0-5), pkg-config (= 0.29.2-1), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-5), tar (= 1.32+dfsg-1), util-linux (= 2.36.1-2), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1605553596" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libmuscle-dev_3.7+4565-7_mips64el.deb ------------------------------------- new Debian package, version 2.0. size 341796 bytes: control archive=1876 bytes. 943 bytes, 24 lines control 2720 bytes, 40 lines md5sums Package: libmuscle-dev Source: libmuscle Version: 3.7+4565-7 Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 1946 Depends: libmuscle1 (= 3.7+4565-7) Conflicts: libmuscle-3.7-dev Replaces: libmuscle-3.7-dev Provides: libmuscle-3.7-dev Section: libdevel Priority: optional Homepage: http://sourceforge.net/p/mauve/code/HEAD/tree/muscle/trunk/ Description: multiple alignment development library for protein sequences MUSCLE is a multiple alignment program for protein sequences. MUSCLE stands for multiple sequence comparison by log-expectation. In the authors tests, MUSCLE achieved the highest scores of all tested programs on several alignment accuracy benchmarks, and is also one of the fastest programs out there. . This library was derived from the original MUSCLE and turned into a library. . This package contains the static library and header files. drwxr-xr-x root/root 0 2020-11-16 19:06 ./ drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/ drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/include/ drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/include/libMUSCLE/ -rw-r--r-- root/root 2248 2020-11-16 19:06 ./usr/include/libMUSCLE/alpha.h -rw-r--r-- root/root 4684 2020-11-16 19:06 ./usr/include/libMUSCLE/clust.h -rw-r--r-- root/root 2392 2020-11-16 19:06 ./usr/include/libMUSCLE/cluster.h -rw-r--r-- root/root 623 2020-11-16 19:06 ./usr/include/libMUSCLE/clustset.h -rw-r--r-- root/root 1087 2020-11-16 19:06 ./usr/include/libMUSCLE/clustsetdf.h -rw-r--r-- root/root 1329 2020-11-16 19:06 ./usr/include/libMUSCLE/clustsetmsa.h -rw-r--r-- root/root 1927 2020-11-16 19:06 ./usr/include/libMUSCLE/diaglist.h -rw-r--r-- root/root 1117 2020-11-16 19:06 ./usr/include/libMUSCLE/distcalc.h -rw-r--r-- root/root 854 2020-11-16 19:06 ./usr/include/libMUSCLE/distfunc.h -rw-r--r-- root/root 1075 2020-11-16 19:06 ./usr/include/libMUSCLE/dpregionlist.h -rw-r--r-- root/root 1100 2020-11-16 19:06 ./usr/include/libMUSCLE/dpreglist.h -rw-r--r-- root/root 554 2020-11-16 19:06 ./usr/include/libMUSCLE/edgelist.h -rw-r--r-- root/root 307 2020-11-16 19:06 ./usr/include/libMUSCLE/enumopts.h -rw-r--r-- root/root 2053 2020-11-16 19:06 ./usr/include/libMUSCLE/enums.h -rw-r--r-- root/root 574 2020-11-16 19:06 ./usr/include/libMUSCLE/estring.h -rw-r--r-- root/root 2916 2020-11-16 19:06 ./usr/include/libMUSCLE/gapscoredimer.h -rw-r--r-- root/root 296 2020-11-16 19:06 ./usr/include/libMUSCLE/gonnet.h -rw-r--r-- root/root 5963 2020-11-16 19:06 ./usr/include/libMUSCLE/intmath.h -rw-r--r-- root/root 6291 2020-11-16 19:06 ./usr/include/libMUSCLE/msa.h -rw-r--r-- root/root 882 2020-11-16 19:06 ./usr/include/libMUSCLE/msadist.h -rw-r--r-- root/root 12119 2020-11-16 19:06 ./usr/include/libMUSCLE/muscle.h -rw-r--r-- root/root 1359 2020-11-16 19:06 ./usr/include/libMUSCLE/objscore.h -rw-r--r-- root/root 3555 2020-11-16 19:06 ./usr/include/libMUSCLE/params.h -rw-r--r-- root/root 4746 2020-11-16 19:06 ./usr/include/libMUSCLE/profile.h -rw-r--r-- root/root 2477 2020-11-16 19:06 ./usr/include/libMUSCLE/pwpath.h -rw-r--r-- root/root 416 2020-11-16 19:06 ./usr/include/libMUSCLE/refine.h -rw-r--r-- root/root 555 2020-11-16 19:06 ./usr/include/libMUSCLE/scorehistory.h -rw-r--r-- root/root 1915 2020-11-16 19:06 ./usr/include/libMUSCLE/seq.h -rw-r--r-- root/root 1607 2020-11-16 19:06 ./usr/include/libMUSCLE/seqvect.h -rw-r--r-- root/root 1633 2020-11-16 19:06 ./usr/include/libMUSCLE/textfile.h -rw-r--r-- root/root 1379 2020-11-16 19:06 ./usr/include/libMUSCLE/threadstorage.h -rw-r--r-- root/root 468 2020-11-16 19:06 ./usr/include/libMUSCLE/timing.h -rw-r--r-- root/root 9608 2020-11-16 19:06 ./usr/include/libMUSCLE/tree.h -rw-r--r-- root/root 2301 2020-11-16 19:06 ./usr/include/libMUSCLE/types.h -rw-r--r-- root/root 180 2020-11-16 19:06 ./usr/include/libMUSCLE/unixio.h drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/lib/ drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/lib/mips64el-linux-gnuabi64/ -rw-r--r-- root/root 1872676 2020-11-16 19:06 ./usr/lib/mips64el-linux-gnuabi64/libMUSCLE.a lrwxrwxrwx root/root 0 2020-11-16 19:06 ./usr/lib/mips64el-linux-gnuabi64/libMUSCLE.so -> libMUSCLE.so.1.0.0 drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/lib/mips64el-linux-gnuabi64/pkgconfig/ -rw-r--r-- root/root 286 2020-11-16 19:06 ./usr/lib/mips64el-linux-gnuabi64/pkgconfig/libMUSCLE.pc drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/share/ drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/share/doc/libmuscle-dev/ -rw-r--r-- root/root 432 2020-11-16 19:06 ./usr/share/doc/libmuscle-dev/README.Debian -rw-r--r-- root/root 833 2020-11-16 19:06 ./usr/share/doc/libmuscle-dev/changelog.Debian.gz -rw-r--r-- root/root 1105 2020-11-16 19:06 ./usr/share/doc/libmuscle-dev/copyright libmuscle1-dbgsym_3.7+4565-7_mips64el.deb ----------------------------------------- new Debian package, version 2.0. size 879420 bytes: control archive=544 bytes. 390 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: libmuscle1-dbgsym Source: libmuscle Version: 3.7+4565-7 Auto-Built-Package: debug-symbols Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 957 Depends: libmuscle1 (= 3.7+4565-7) Section: debug Priority: optional Description: debug symbols for libmuscle1 Build-Ids: 2087a28230feaf12129199e6d7bd3d7d1c953556 drwxr-xr-x root/root 0 2020-11-16 19:06 ./ drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/ drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/lib/ drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/lib/debug/.build-id/20/ -rw-r--r-- root/root 969616 2020-11-16 19:06 ./usr/lib/debug/.build-id/20/87a28230feaf12129199e6d7bd3d7d1c953556.debug drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/share/ drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-11-16 19:06 ./usr/share/doc/libmuscle1-dbgsym -> libmuscle1 libmuscle1_3.7+4565-7_mips64el.deb ---------------------------------- new Debian package, version 2.0. size 235424 bytes: control archive=7988 bytes. 951 bytes, 24 lines control 306 bytes, 4 lines md5sums 37 bytes, 1 lines shlibs 44113 bytes, 903 lines symbols 67 bytes, 2 lines triggers Package: libmuscle1 Source: libmuscle Version: 3.7+4565-7 Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 754 Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.0), libgomp1 (>= 4.2.1), libstdc++6 (>= 5) Conflicts: libmuscle-3.7-1 Replaces: libmuscle-3.7-1 Provides: libmuscle-3.7-1 Section: libs Priority: optional Homepage: http://sourceforge.net/p/mauve/code/HEAD/tree/muscle/trunk/ Description: multiple alignment library for protein sequences MUSCLE is a multiple alignment program for protein sequences. MUSCLE stands for multiple sequence comparison by log-expectation. In the authors tests, MUSCLE achieved the highest scores of all tested programs on several alignment accuracy benchmarks, and is also one of the fastest programs out there. . This library was derived from the original MUSCLE and turned into a library. . This package contains the dynamic library. drwxr-xr-x root/root 0 2020-11-16 19:06 ./ drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/ drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/lib/ drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/lib/mips64el-linux-gnuabi64/ lrwxrwxrwx root/root 0 2020-11-16 19:06 ./usr/lib/mips64el-linux-gnuabi64/libMUSCLE-3.7.so.1 -> libMUSCLE.so.1 lrwxrwxrwx root/root 0 2020-11-16 19:06 ./usr/lib/mips64el-linux-gnuabi64/libMUSCLE.so.1 -> libMUSCLE.so.1.0.0 -rw-r--r-- root/root 708336 2020-11-16 19:06 ./usr/lib/mips64el-linux-gnuabi64/libMUSCLE.so.1.0.0 drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/share/ drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/share/doc/libmuscle1/ -rw-r--r-- root/root 833 2020-11-16 19:06 ./usr/share/doc/libmuscle1/changelog.Debian.gz -rw-r--r-- root/root 1105 2020-11-16 19:06 ./usr/share/doc/libmuscle1/copyright drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/share/lintian/ drwxr-xr-x root/root 0 2020-11-16 19:06 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 220 2020-11-16 19:06 ./usr/share/lintian/overrides/libmuscle1 lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [551 B] Get:5 copy:/<>/apt_archive ./ Packages [640 B] Fetched 2154 B in 0s (90.4 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common sbuild-build-depends-lintian-dummy:mips64el t1utils unzip 0 upgraded, 89 newly installed, 0 to remove and 0 not upgraded. Need to get 7545 kB of archives. After this operation, 21.8 MB of additional disk space will be used. 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http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.21-8 [84.3 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-25 [172 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.104.0 [1265 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7545 kB in 0s (33.7 MB/s) Selecting previously unselected package readline-common. (Reading database ... 21168 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.1~rc3-1_all.deb ... Unpacking readline-common (8.1~rc3-1) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.1~rc3-1_amd64.deb ... Unpacking libreadline8:amd64 (8.1~rc3-1) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.3-7.1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7.1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../04-gpgconf_2.2.20-1_amd64.deb ... Unpacking gpgconf (2.2.20-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../05-libsqlite3-0_3.34.0-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.34.0-1) ... 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Setting up liburi-perl (5.05-1) ... Setting up libemail-address-xs-perl (1.04-1+b3) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b6) ... Setting up libreadline8:amd64 (8.1~rc3-1) ... Setting up libtype-tiny-perl (1.012000-1) ... Setting up libtext-markdown-discount-perl:amd64 (0.12-1+b1) ... Setting up libexception-class-perl (1.44-1) ... Setting up libdevel-callchecker-perl (0.008-1+b2) ... Setting up libdata-optlist-perl (0.110-1) ... Setting up gpgconf (2.2.20-1) ... Setting up gpg (2.2.20-1) ... Setting up libsub-exporter-perl (0.987-1) ... Setting up libiterator-perl (0.03+ds1-1) ... Setting up libiterator-util-perl (0.02+ds1-1) ... Setting up libparams-classify-perl (0.015-1+b3) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libpackage-stash-perl (0.39-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.004004-1) ... Setting up libmoox-aliases-perl (0.001006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.104.0) ... Setting up sbuild-build-depends-lintian-dummy:mips64el (0.invalid.0) ... Processing triggers for man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.31-5) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 52216 Build-Time: 158 Distribution: unstable Foreign Architectures: mips64el Host Architecture: mips64el Install-Time: 24 Job: libmuscle_3.7+4565-7 Lintian: pass Machine Architecture: amd64 Package: libmuscle Package-Time: 194 Source-Version: 3.7+4565-7 Space: 52216 Status: successful Version: 3.7+4565-7 -------------------------------------------------------------------------------- Finished at 2020-12-05T16:22:46Z Build needed 00:03:14, 52216k disk space