sbuild (Debian sbuild) 0.85.0 (04 January 2023) on mjolnir.einval.org +==============================================================================+ | libmuscle 3.7+4565-8 (amd64) Sat, 10 Aug 2024 22:29:58 +0000 | +==============================================================================+ Package: libmuscle Version: 3.7+4565-8 Source Version: 3.7+4565-8 Distribution: unstable Machine Architecture: arm64 Host Architecture: amd64 Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Unpacking /home/helmut/.cache/sbuild/unstable-arm64-sbuild.tar.zst to /tmp/tmp.sbuild.D2DIyKaF1S... I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<>' I: NOTICE: Log filtering will replace 'build/libmuscle-iWfTTo/resolver-eY8VPQ' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://mirror.einval.org/debian unstable InRelease [198 kB] Get:2 http://mirror.einval.org/debian unstable/main Sources [10.8 MB] Get:3 http://mirror.einval.org/debian unstable/main amd64 Packages [9911 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 Packages [9827 kB] Fetched 30.7 MB in 8s (4005 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libbsd0 Use 'apt autoremove' to remove it. The following NEW packages will be installed: login.defs The following packages will be upgraded: base-files binutils binutils-aarch64-linux-gnu binutils-common bsdutils cpp-14 cpp-14-aarch64-linux-gnu findutils g++-14 g++-14-aarch64-linux-gnu gcc-14 gcc-14-aarch64-linux-gnu gcc-14-base libasan8 libatomic1 libaudit-common libaudit1 libbinutils libblkid1 libcc1-0 libctf-nobfd0 libctf0 libgcc-14-dev libgcc-s1 libgcrypt20 libgdbm-compat4t64 libgdbm6t64 libgomp1 libgpg-error0 libgprofng0 libhwasan0 libitm1 liblsan0 libmount1 libsframe1 libsmartcols1 libssl3t64 libstdc++-14-dev libstdc++6 libtsan2 libubsan1 libuuid1 linux-libc-dev login sysvinit-utils util-linux 46 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 67.5 MB of archives. After this operation, 1619 kB disk space will be freed. Get:1 http://mirror.einval.org/debian unstable/main arm64 base-files arm64 13.5 [72.8 kB] Get:2 http://mirror.einval.org/debian unstable/main arm64 bsdutils arm64 1:2.40.2-6 [103 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 findutils arm64 4.10.0-3 [696 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 libsmartcols1 arm64 2.40.2-6 [135 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 libuuid1 arm64 2.40.2-6 [35.1 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 libblkid1 arm64 2.40.2-6 [162 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 libmount1 arm64 2.40.2-6 [190 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 util-linux arm64 2.40.2-6 [1174 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 sysvinit-utils arm64 3.10-1 [32.6 kB] Get:10 http://mirror.einval.org/debian unstable/main arm64 login.defs all 1:4.16.0-4 [185 kB] Get:11 http://mirror.einval.org/debian unstable/main arm64 libaudit-common all 1:4.0.1-1 [12.3 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 libaudit1 arm64 1:4.0.1-1 [53.8 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 login arm64 1:4.16.0-2+really2.40.2-6 [56.0 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 libubsan1 arm64 14.2.0-1 [1040 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 libgomp1 arm64 14.2.0-1 [123 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 libitm1 arm64 14.2.0-1 [24.1 kB] Get:17 http://mirror.einval.org/debian unstable/main arm64 libatomic1 arm64 14.2.0-1 [10.1 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 libasan8 arm64 14.2.0-1 [2577 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 liblsan0 arm64 14.2.0-1 [1162 kB] Get:20 http://mirror.einval.org/debian unstable/main arm64 libhwasan0 arm64 14.2.0-1 [1443 kB] Get:21 http://mirror.einval.org/debian unstable/main arm64 gcc-14-base arm64 14.2.0-1 [45.8 kB] Get:22 http://mirror.einval.org/debian unstable/main arm64 libstdc++6 arm64 14.2.0-1 [638 kB] Get:23 http://mirror.einval.org/debian unstable/main arm64 g++-14 arm64 14.2.0-1 [18.5 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 gcc-14 arm64 14.2.0-1 [510 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 cpp-14 arm64 14.2.0-1 [1276 B] Get:26 http://mirror.einval.org/debian unstable/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-1 [9161 kB] Get:27 http://mirror.einval.org/debian unstable/main arm64 libcc1-0 arm64 14.2.0-1 [41.8 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-1 [17.7 MB] Get:29 http://mirror.einval.org/debian unstable/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-1 [10.1 MB] Get:30 http://mirror.einval.org/debian unstable/main arm64 libstdc++-14-dev arm64 14.2.0-1 [2261 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 libgcc-14-dev arm64 14.2.0-1 [2362 kB] Get:32 http://mirror.einval.org/debian unstable/main arm64 libtsan2 arm64 14.2.0-1 [2385 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 libgcc-s1 arm64 14.2.0-1 [54.1 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 libgprofng0 arm64 2.43-2 [686 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 libctf0 arm64 2.43-2 [83.6 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 libctf-nobfd0 arm64 2.43-2 [150 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libsframe1 arm64 2.43-2 [76.1 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 libbinutils arm64 2.43-2 [656 kB] Get:39 http://mirror.einval.org/debian unstable/main arm64 binutils-common arm64 2.43-2 [2632 kB] Get:40 http://mirror.einval.org/debian unstable/main arm64 binutils arm64 2.43-2 [81.1 kB] Get:41 http://mirror.einval.org/debian unstable/main arm64 binutils-aarch64-linux-gnu arm64 2.43-2 [2795 kB] Get:42 http://mirror.einval.org/debian unstable/main arm64 libgpg-error0 arm64 1.50-3 [77.9 kB] Get:43 http://mirror.einval.org/debian unstable/main arm64 libgcrypt20 arm64 1.11.0-6 [741 kB] Get:44 http://mirror.einval.org/debian unstable/main arm64 libssl3t64 arm64 3.3.1-2 [2572 kB] Get:45 http://mirror.einval.org/debian unstable/main arm64 libgdbm6t64 arm64 1.24-2 [74.0 kB] Get:46 http://mirror.einval.org/debian unstable/main arm64 libgdbm-compat4t64 arm64 1.24-2 [50.3 kB] Get:47 http://mirror.einval.org/debian unstable/main arm64 linux-libc-dev all 6.10.3-1 [2367 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 67.5 MB in 1s (88.7 MB/s) (Reading database ... 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Setting up libgdbm-compat4t64:arm64 (1.24-2) ... Setting up binutils-common:arm64 (2.43-2) ... Setting up linux-libc-dev (6.10.3-1) ... Setting up libctf-nobfd0:arm64 (2.43-2) ... Setting up libgomp1:arm64 (14.2.0-1) ... Setting up libsframe1:arm64 (2.43-2) ... Setting up libatomic1:arm64 (14.2.0-1) ... Setting up libubsan1:arm64 (14.2.0-1) ... Setting up cpp-14-aarch64-linux-gnu (14.2.0-1) ... Setting up libhwasan0:arm64 (14.2.0-1) ... Setting up libasan8:arm64 (14.2.0-1) ... Setting up libtsan2:arm64 (14.2.0-1) ... Setting up libbinutils:arm64 (2.43-2) ... Setting up libcc1-0:arm64 (14.2.0-1) ... Setting up liblsan0:arm64 (14.2.0-1) ... Setting up libitm1:arm64 (14.2.0-1) ... Setting up login (1:4.16.0-2+really2.40.2-6) ... Setting up libctf0:arm64 (2.43-2) ... Setting up libgprofng0:arm64 (2.43-2) ... Setting up cpp-14 (14.2.0-1) ... Setting up libgcc-14-dev:arm64 (14.2.0-1) ... Setting up libstdc++-14-dev:arm64 (14.2.0-1) ... Setting up binutils-aarch64-linux-gnu (2.43-2) ... Setting up binutils (2.43-2) ... Setting up gcc-14-aarch64-linux-gnu (14.2.0-1) ... Setting up g++-14-aarch64-linux-gnu (14.2.0-1) ... Setting up gcc-14 (14.2.0-1) ... Setting up g++-14 (14.2.0-1) ... Processing triggers for libc-bin (2.39-6) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'libmuscle' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libmuscle.git Please use: git clone https://salsa.debian.org/med-team/libmuscle.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 199 kB of source archives. Get:1 http://mirror.einval.org/debian unstable/main libmuscle 3.7+4565-8 (dsc) [2237 B] Get:2 http://mirror.einval.org/debian unstable/main libmuscle 3.7+4565-8 (tar) [184 kB] Get:3 http://mirror.einval.org/debian unstable/main libmuscle 3.7+4565-8 (diff) [12.7 kB] Fetched 199 kB in 0s (3122 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/libmuscle-iWfTTo/libmuscle-3.7+4565' with '<>' I: NOTICE: Log filtering will replace 'build/libmuscle-iWfTTo' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), d-shlibs, pkgconf, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-amd64:arm64, libc-dev:amd64, libstdc++-dev:amd64 Filtered Build-Depends: debhelper-compat (= 13), d-shlibs, pkgconf, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-amd64:arm64, libc-dev:amd64, libstdc++-dev:amd64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [733 B] Get:5 copy:/<>/apt_archive ./ Packages [776 B] Fetched 2118 B in 0s (118 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following package was automatically installed and is no longer required: libbsd0 Use 'apt autoremove' to remove it. The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-x86-64-linux-gnu bsdextrautils cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu cross-config crossbuild-essential-amd64 d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-14-base:amd64 gcc-14-cross-base gcc-14-x86-64-linux-gnu gcc-14-x86-64-linux-gnu-base gcc-x86-64-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan8:amd64 libasan8-amd64-cross libatomic1:amd64 libatomic1-amd64-cross libc6:amd64 libc6-amd64-cross libc6-dev:amd64 libc6-dev-amd64-cross libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:amd64 libcrypt1:amd64 libdebhelper-perl libdebian-dpkgcross-perl libelf1t64 libfakeroot libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-14-dev:amd64 libgcc-14-dev-amd64-cross libgcc-s1:amd64 libgcc-s1-amd64-cross libgomp1:amd64 libgomp1-amd64-cross libhwasan0:amd64 libhwasan0-amd64-cross libicu72 libio-string-perl libitm1:amd64 libitm1-amd64-cross liblocale-gettext-perl liblsan0:amd64 liblsan0-amd64-cross libmagic-mgc libmagic1t64 libpipeline1 libpkgconf3 libquadmath0:amd64 libquadmath0-amd64-cross libstdc++-14-dev:amd64 libstdc++-14-dev-amd64-cross libstdc++6:amd64 libstdc++6-amd64-cross libtool libtsan2:amd64 libtsan2-amd64-cross libubsan1:amd64 libubsan1-amd64-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl m4 man-db pkgconf:amd64 pkgconf-bin po-debconf sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-14-locales cpp-14-doc cpp-doc dh-make binutils-multiarch gcc-14-doc manpages-dev flex bison gdb-x86-64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:amd64 libc-l10n:amd64 locales:amd64 libnss-nis:amd64 libnss-nisplus:amd64 manpages-dev:amd64 libstdc++-14-doc:amd64 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:amd64 libarchive-cpio-perl libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-x86-64-linux-gnu bsdextrautils cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu cross-config crossbuild-essential-amd64 d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-14-base:amd64 gcc-14-cross-base gcc-14-x86-64-linux-gnu gcc-14-x86-64-linux-gnu-base gcc-x86-64-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan8:amd64 libasan8-amd64-cross libatomic1:amd64 libatomic1-amd64-cross libc6:amd64 libc6-amd64-cross libc6-dev:amd64 libc6-dev-amd64-cross libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:amd64 libcrypt1:amd64 libdebhelper-perl libdebian-dpkgcross-perl libelf1t64 libfakeroot libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-14-dev:amd64 libgcc-14-dev-amd64-cross libgcc-s1:amd64 libgcc-s1-amd64-cross libgomp1:amd64 libgomp1-amd64-cross libhwasan0:amd64 libhwasan0-amd64-cross libicu72 libio-string-perl libitm1:amd64 libitm1-amd64-cross liblocale-gettext-perl liblsan0:amd64 liblsan0-amd64-cross libmagic-mgc libmagic1t64 libpipeline1 libpkgconf3 libquadmath0:amd64 libquadmath0-amd64-cross libstdc++-14-dev:amd64 libstdc++-14-dev-amd64-cross libstdc++6:amd64 libstdc++6-amd64-cross libtool libtsan2:amd64 libtsan2-amd64-cross libubsan1:amd64 libubsan1-amd64-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl m4 man-db pkgconf:amd64 pkgconf-bin po-debconf sbuild-build-depends-main-dummy:amd64 sensible-utils ucf 0 upgraded, 95 newly installed, 0 to remove and 0 not upgraded. Need to get 103 MB of archives. After this operation, 430 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [928 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 liblocale-gettext-perl arm64 1.07-7 [14.8 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3 [314 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3 [100 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 file arm64 1:5.45-3 [43.0 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 gettext-base arm64 0.22.5-2 [198 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b1 [69.0 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 groff-base arm64 1.23.0-5 [1129 kB] Get:10 http://mirror.einval.org/debian unstable/main arm64 bsdextrautils arm64 2.40.2-6 [96.0 kB] Get:11 http://mirror.einval.org/debian unstable/main arm64 libpipeline1 arm64 1.5.7-2 [36.5 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 man-db arm64 2.12.1-3 [1397 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 ucf all 3.0043+nmu1 [55.2 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 autoconf all 2.71-3 [332 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get:17 http://mirror.einval.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 autopoint all 0.22.5-2 [723 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 gcc-14-x86-64-linux-gnu-base arm64 14.2.0-1cross1 [45.9 kB] Get:20 http://mirror.einval.org/debian unstable/main arm64 cpp-14-x86-64-linux-gnu arm64 14.2.0-1cross1 [10.4 MB] Get:21 http://mirror.einval.org/debian unstable/main arm64 cpp-x86-64-linux-gnu arm64 4:14.1.0-2 [4800 B] Get:22 http://mirror.einval.org/debian unstable/main arm64 cross-config all 2.6.20 [16.3 kB] Get:23 http://mirror.einval.org/debian unstable/main arm64 binutils-x86-64-linux-gnu arm64 2.43-2 [2439 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 gcc-14-cross-base all 14.2.0-1cross1 [41.2 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 libgcc-s1-amd64-cross all 14.2.0-1cross1 [72.8 kB] Get:26 http://mirror.einval.org/debian unstable/main arm64 libgomp1-amd64-cross all 14.2.0-1cross1 [129 kB] Get:27 http://mirror.einval.org/debian unstable/main arm64 libitm1-amd64-cross all 14.2.0-1cross1 [25.3 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 libatomic1-amd64-cross all 14.2.0-1cross1 [9020 B] Get:29 http://mirror.einval.org/debian unstable/main arm64 libasan8-amd64-cross all 14.2.0-1cross1 [2716 kB] Get:30 http://mirror.einval.org/debian unstable/main arm64 liblsan0-amd64-cross all 14.2.0-1cross1 [1204 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 libtsan2-amd64-cross all 14.2.0-1cross1 [2450 kB] Get:32 http://mirror.einval.org/debian unstable/main arm64 libc6-amd64-cross all 2.39-4cross1 [1502 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 libstdc++6-amd64-cross all 14.2.0-1cross1 [667 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 libubsan1-amd64-cross all 14.2.0-1cross1 [1074 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 libhwasan0-amd64-cross all 14.2.0-1cross1 [1485 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 libquadmath0-amd64-cross all 14.2.0-1cross1 [145 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libgcc-14-dev-amd64-cross all 14.2.0-1cross1 [2668 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 gcc-14-x86-64-linux-gnu arm64 14.2.0-1cross1 [20.0 MB] Get:39 http://mirror.einval.org/debian unstable/main arm64 gcc-x86-64-linux-gnu arm64 4:14.1.0-2 [1452 B] Get:40 http://mirror.einval.org/debian unstable/main arm64 libc6-dev-amd64-cross all 2.39-4cross1 [1920 kB] Get:41 http://mirror.einval.org/debian unstable/main arm64 libstdc++-14-dev-amd64-cross all 14.2.0-1cross1 [2342 kB] Get:42 http://mirror.einval.org/debian unstable/main arm64 g++-14-x86-64-linux-gnu arm64 14.2.0-1cross1 [11.2 MB] Get:43 http://mirror.einval.org/debian unstable/main arm64 g++-x86-64-linux-gnu arm64 4:14.1.0-2 [1204 B] Get:44 http://mirror.einval.org/debian unstable/main arm64 libconfig-inifiles-perl all 3.000003-3 [44.8 kB] Get:45 http://mirror.einval.org/debian unstable/main arm64 libio-string-perl all 1.08-4 [12.1 kB] Get:46 http://mirror.einval.org/debian unstable/main arm64 libicu72 arm64 72.1-5 [9224 kB] Get:47 http://mirror.einval.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg-3+b1 [609 kB] Get:48 http://mirror.einval.org/debian unstable/main arm64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:49 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:50 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:51 http://mirror.einval.org/debian unstable/main arm64 libxml-libxml-perl arm64 2.0207+dfsg+really+2.0134-4 [299 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:53 http://mirror.einval.org/debian unstable/main arm64 libyaml-perl all 1.31-1 [64.8 kB] Get:54 http://mirror.einval.org/debian unstable/main arm64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 libfile-which-perl all 1.27-2 [15.1 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:57 http://mirror.einval.org/debian unstable/main arm64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:58 http://mirror.einval.org/debian unstable/main arm64 dpkg-cross all 2.6.20 [25.8 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 crossbuild-essential-amd64 all 12.10 [3488 B] Get:60 http://mirror.einval.org/debian unstable/main arm64 d-shlibs all 0.106 [10.9 kB] Get:61 http://mirror.einval.org/debian unstable/main arm64 libdebhelper-perl all 13.16 [88.6 kB] Get:62 http://mirror.einval.org/debian unstable/main arm64 libtool all 2.4.7-7 [517 kB] Get:63 http://mirror.einval.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get:64 http://mirror.einval.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get:65 http://mirror.einval.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get:66 http://mirror.einval.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get:67 http://mirror.einval.org/debian unstable/main arm64 libelf1t64 arm64 0.191-2 [188 kB] Get:68 http://mirror.einval.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get:69 http://mirror.einval.org/debian unstable/main arm64 gettext arm64 0.22.5-2 [1532 kB] Get:70 http://mirror.einval.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:71 http://mirror.einval.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get:72 http://mirror.einval.org/debian unstable/main arm64 debhelper all 13.16 [891 kB] Get:73 http://mirror.einval.org/debian unstable/main arm64 libfakeroot arm64 1.35.1-1 [29.6 kB] Get:74 http://mirror.einval.org/debian unstable/main arm64 fakeroot arm64 1.35.1-1 [74.0 kB] Get:75 http://mirror.einval.org/debian unstable/main amd64 gcc-14-base amd64 14.2.0-1 [45.7 kB] Get:76 http://mirror.einval.org/debian unstable/main amd64 libgcc-s1 amd64 14.2.0-1 [72.8 kB] Get:77 http://mirror.einval.org/debian unstable/main amd64 libc6 amd64 2.39-6 [2781 kB] Get:78 http://mirror.einval.org/debian unstable/main amd64 libasan8 amd64 14.2.0-1 [2727 kB] Get:79 http://mirror.einval.org/debian unstable/main amd64 libatomic1 amd64 14.2.0-1 [9280 B] Get:80 http://mirror.einval.org/debian unstable/main amd64 libcrypt1 amd64 1:4.4.36-4 [89.8 kB] Get:81 http://mirror.einval.org/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.36-4 [119 kB] Get:82 http://mirror.einval.org/debian unstable/main amd64 libc6-dev amd64 2.39-6 [1924 kB] Get:83 http://mirror.einval.org/debian unstable/main amd64 libgomp1 amd64 14.2.0-1 [137 kB] Get:84 http://mirror.einval.org/debian unstable/main amd64 libitm1 amd64 14.2.0-1 [25.9 kB] Get:85 http://mirror.einval.org/debian unstable/main amd64 liblsan0 amd64 14.2.0-1 [1205 kB] Get:86 http://mirror.einval.org/debian unstable/main amd64 libtsan2 amd64 14.2.0-1 [2461 kB] Get:87 http://mirror.einval.org/debian unstable/main amd64 libstdc++6 amd64 14.2.0-1 [713 kB] Get:88 http://mirror.einval.org/debian unstable/main amd64 libubsan1 amd64 14.2.0-1 [1075 kB] Get:89 http://mirror.einval.org/debian unstable/main amd64 libhwasan0 amd64 14.2.0-1 [1489 kB] Get:90 http://mirror.einval.org/debian unstable/main amd64 libquadmath0 amd64 14.2.0-1 [145 kB] Get:91 http://mirror.einval.org/debian unstable/main amd64 libgcc-14-dev amd64 14.2.0-1 [2673 kB] Get:92 http://mirror.einval.org/debian unstable/main arm64 libpkgconf3 arm64 1.8.1-3 [35.3 kB] Get:93 http://mirror.einval.org/debian unstable/main amd64 libstdc++-14-dev amd64 14.2.0-1 [2341 kB] Get:94 http://mirror.einval.org/debian unstable/main arm64 pkgconf-bin arm64 1.8.1-3 [29.4 kB] Get:95 http://mirror.einval.org/debian unstable/main amd64 pkgconf amd64 1.8.1-3 [26.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 103 MB in 1s (88.4 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11874 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-7_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-7) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.45-3_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../03-libmagic1t64_1%3a5.45-3_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.45-3_arm64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.22.5-2_arm64.deb ... Unpacking gettext-base (0.22.5-2) ... 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Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-7) ... Setting up libasan8-amd64-cross (14.2.0-1cross1) ... Setting up liblsan0-amd64-cross (14.2.0-1cross1) ... Setting up libc6-dev-amd64-cross (2.39-4cross1) ... Setting up libtsan2-amd64-cross (14.2.0-1cross1) ... Setting up pkgconf:amd64 (1.8.1-3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libhwasan0-amd64-cross (14.2.0-1cross1) ... Setting up libubsan1-amd64-cross (14.2.0-1cross1) ... Setting up ucf (3.0043+nmu1) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libgcc-14-dev-amd64-cross (14.2.0-1cross1) ... Setting up groff-base (1.23.0-5) ... Setting up gcc-14-x86-64-linux-gnu (14.2.0-1cross1) ... Setting up libstdc++-14-dev-amd64-cross (14.2.0-1cross1) ... Setting up gcc-x86-64-linux-gnu (4:14.1.0-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.1-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-14-x86-64-linux-gnu (14.2.0-1cross1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-4) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-x86-64-linux-gnu (4:14.1.0-2) ... Setting up debhelper (13.16) ... Setting up libxml-simple-perl (2.25-2) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-amd64 (12.10) ... Setting up libgcc-s1:amd64 (14.2.0-1) ... Setting up libc6:amd64 (2.39-6) ... Setting up libhwasan0:amd64 (14.2.0-1) ... Setting up libasan8:amd64 (14.2.0-1) ... Setting up libtsan2:amd64 (14.2.0-1) ... Setting up libstdc++6:amd64 (14.2.0-1) ... Setting up liblsan0:amd64 (14.2.0-1) ... Setting up libitm1:amd64 (14.2.0-1) ... Setting up libcrypt1:amd64 (1:4.4.36-4) ... Setting up libgomp1:amd64 (14.2.0-1) ... Setting up libquadmath0:amd64 (14.2.0-1) ... Setting up libatomic1:amd64 (14.2.0-1) ... Setting up libubsan1:amd64 (14.2.0-1) ... Setting up libcrypt-dev:amd64 (1:4.4.36-4) ... Setting up libc6-dev:amd64 (2.39-6) ... Setting up libgcc-14-dev:amd64 (14.2.0-1) ... Setting up libstdc++-14-dev:amd64 (14.2.0-1) ... Setting up sbuild-build-depends-main-dummy:amd64 (0.invalid.0) ... Processing triggers for base-files (13.5) ... Processing triggers for libc-bin (2.39-6) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-7-arm64 #1 SMP Debian 6.1.20-1 (2023-03-19) arm64 (aarch64) Toolchain package versions: binutils_2.43-2 dpkg-dev_1.22.11 g++-14_14.2.0-1 gcc-14_14.2.0-1 libc6-dev_2.39-6 libstdc++-14-dev_14.2.0-1 libstdc++-14-dev-amd64-cross_14.2.0-1cross1 libstdc++6_14.2.0-1 libstdc++6-amd64-cross_14.2.0-1cross1 linux-libc-dev_6.10.3-1 Package versions: apt_2.9.7 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 autotools-dev_20220109.1 base-files_13.5 base-passwd_3.6.4 bash_5.2.21-2.1 binutils_2.43-2 binutils-aarch64-linux-gnu_2.43-2 binutils-common_2.43-2 binutils-x86-64-linux-gnu_2.43-2 bsdextrautils_2.40.2-6 bsdutils_1:2.40.2-6 build-essential_12.10 bzip2_1.0.8-5.1 coreutils_9.4-3.1 cpp_4:14.1.0-2 cpp-14_14.2.0-1 cpp-14-aarch64-linux-gnu_14.2.0-1 cpp-14-x86-64-linux-gnu_14.2.0-1cross1 cpp-aarch64-linux-gnu_4:14.1.0-2 cpp-x86-64-linux-gnu_4:14.1.0-2 cross-config_2.6.20 crossbuild-essential-amd64_12.10 d-shlibs_0.106 dash_0.5.12-9 debconf_1.5.87 debhelper_13.16 debian-archive-keyring_2023.4 debianutils_5.20 dh-autoreconf_20 dh-strip-nondeterminism_1.14.0-1 diffutils_1:3.10-1 dpkg_1.22.11 dpkg-cross_2.6.20 dpkg-dev_1.22.11 dwz_0.15-1+b1 fakeroot_1.35.1-1 file_1:5.45-3 findutils_4.10.0-3 g++_4:14.1.0-2 g++-14_14.2.0-1 g++-14-aarch64-linux-gnu_14.2.0-1 g++-14-x86-64-linux-gnu_14.2.0-1cross1 g++-aarch64-linux-gnu_4:14.1.0-2 g++-x86-64-linux-gnu_4:14.1.0-2 gcc_4:14.1.0-2 gcc-14_14.2.0-1 gcc-14-aarch64-linux-gnu_14.2.0-1 gcc-14-base_14.2.0-1 gcc-14-cross-base_14.2.0-1cross1 gcc-14-x86-64-linux-gnu_14.2.0-1cross1 gcc-14-x86-64-linux-gnu-base_14.2.0-1cross1 gcc-aarch64-linux-gnu_4:14.1.0-2 gcc-x86-64-linux-gnu_4:14.1.0-2 gettext_0.22.5-2 gettext-base_0.22.5-2 gpgv_2.2.43-8 grep_3.11-4 groff-base_1.23.0-5 gzip_1.12-1.1 hostname_3.23+nmu2 init-system-helpers_1.66 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2 libapt-pkg6.0t64_2.9.7 libarchive-zip-perl_1.68-1 libasan8_14.2.0-1 libasan8-amd64-cross_14.2.0-1cross1 libatomic1_14.2.0-1 libatomic1-amd64-cross_14.2.0-1cross1 libattr1_1:2.5.2-1 libaudit-common_1:4.0.1-1 libaudit1_1:4.0.1-1 libbinutils_2.43-2 libblkid1_2.40.2-6 libbsd0_0.12.2-1 libbz2-1.0_1.0.8-5.1 libc-bin_2.39-6 libc-dev-bin_2.39-6 libc6_2.39-6 libc6-amd64-cross_2.39-4cross1 libc6-dev_2.39-6 libc6-dev-amd64-cross_2.39-4cross1 libcap-ng0_0.8.5-1+b1 libcap2_1:2.66-5 libcc1-0_14.2.0-1 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-3 libcrypt-dev_1:4.4.36-4 libcrypt1_1:4.4.36-4 libctf-nobfd0_2.43-2 libctf0_2.43-2 libdb5.3t64_5.3.28+dfsg2-7 libdebconfclient0_0.272 libdebhelper-perl_13.16 libdebian-dpkgcross-perl_2.6.20 libdpkg-perl_1.22.11 libelf1t64_0.191-2 libfakeroot_1.35.1-1 libffi8_3.4.6-1 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.14.0-1 libfile-which-perl_1.27-2 libgcc-14-dev_14.2.0-1 libgcc-14-dev-amd64-cross_14.2.0-1cross1 libgcc-s1_14.2.0-1 libgcc-s1-amd64-cross_14.2.0-1cross1 libgcrypt20_1.11.0-6 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgmp10_2:6.3.0+dfsg-2+b1 libgnutls30t64_3.8.6-2 libgomp1_14.2.0-1 libgomp1-amd64-cross_14.2.0-1cross1 libgpg-error0_1.50-3 libgprofng0_2.43-2 libhogweed6t64_3.10-1 libhwasan0_14.2.0-1 libhwasan0-amd64-cross_14.2.0-1cross1 libicu72_72.1-5 libidn2-0_2.3.7-2 libio-string-perl_1.08-4 libisl23_0.26-3+b2 libitm1_14.2.0-1 libitm1-amd64-cross_14.2.0-1cross1 libjansson4_2.14-2+b2 liblocale-gettext-perl_1.07-7 liblsan0_14.2.0-1 liblsan0-amd64-cross_14.2.0-1cross1 liblz4-1_1.9.4-3 liblzma5_5.6.2-2 libmagic-mgc_1:5.45-3 libmagic1t64_1:5.45-3 libmd0_1.1.0-2 libmount1_2.40.2-6 libmpc3_1.3.1-1+b2 libmpfr6_4.2.1-1+b1 libnettle8t64_3.10-1 libp11-kit0_0.25.5-2 libpam-modules_1.5.3-7 libpam-modules-bin_1.5.3-7 libpam-runtime_1.5.3-7 libpam0g_1.5.3-7 libpcre2-8-0_10.42-4+b1 libperl5.38t64_5.38.2-5 libpipeline1_1.5.7-2 libpkgconf3_1.8.1-3 libquadmath0_14.2.0-1 libquadmath0-amd64-cross_14.2.0-1cross1 libseccomp2_2.5.5-1+b1 libselinux1_3.5-2+b3 libsframe1_2.43-2 libsmartcols1_2.40.2-6 libssl3t64_3.3.1-2 libstdc++-14-dev_14.2.0-1 libstdc++-14-dev-amd64-cross_14.2.0-1cross1 libstdc++6_14.2.0-1 libstdc++6-amd64-cross_14.2.0-1cross1 libsystemd0_256.4-2 libtasn1-6_4.19.0-3+b2 libtinfo6_6.5-2 libtool_2.4.7-7 libtsan2_14.2.0-1 libtsan2-amd64-cross_14.2.0-1cross1 libubsan1_14.2.0-1 libubsan1-amd64-cross_14.2.0-1cross1 libuchardet0_0.0.8-1+b1 libudev1_256.4-2 libunistring5_1.2-1 libuuid1_2.40.2-6 libxml-libxml-perl_2.0207+dfsg+really+2.0134-4 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-2 libxml2_2.12.7+dfsg-3+b1 libxxhash0_0.8.2-2+b1 libyaml-perl_1.31-1 libzstd1_1.5.6+dfsg-1 linux-libc-dev_6.10.3-1 login_1:4.16.0-2+really2.40.2-6 login.defs_1:4.16.0-4 m4_1.4.19-4 make_4.3-4.1 man-db_2.12.1-3 mawk_1.3.4.20240622-2 ncurses-base_6.5-2 ncurses-bin_6.5-2 patch_2.7.6-7 perl_5.38.2-5 perl-base_5.38.2-5 perl-modules-5.38_5.38.2-5 pkgconf_1.8.1-3 pkgconf-bin_1.8.1-3 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.24 sysvinit-utils_3.10-1 tar_1.35+dfsg-3 ucf_3.0043+nmu1 util-linux_2.40.2-6 xz-utils_5.6.2-2 zlib1g_1:1.3.dfsg+really1.3.1-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libmuscle Binary: libmuscle-dev, libmuscle1 Architecture: any Version: 3.7+4565-8 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Étienne Mollier Homepage: http://sourceforge.net/p/mauve/code/HEAD/tree/muscle/trunk/ Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/libmuscle Vcs-Git: https://salsa.debian.org/med-team/libmuscle.git Build-Depends: debhelper-compat (= 13), d-shlibs, pkgconf Package-List: libmuscle-dev deb libdevel optional arch=any libmuscle1 deb libs optional arch=any Checksums-Sha1: 79bba85d6f4908f4b6e7f42d9c5426958bfceca6 184444 libmuscle_3.7+4565.orig.tar.xz 671498af13737e54b8ba2bf68df0132e48ac1dc3 12720 libmuscle_3.7+4565-8.debian.tar.xz Checksums-Sha256: 7919b2378c8e41badb0828a8fdf8b184e67aeeb5a9f91566935e8a72a9e3b376 184444 libmuscle_3.7+4565.orig.tar.xz c8796dbb9a90a43735c069ac9a52ed81032c73df957b03e43f00f109a013359e 12720 libmuscle_3.7+4565-8.debian.tar.xz Files: cc28b356074dcf1ef98f9634f9bc1d74 184444 libmuscle_3.7+4565.orig.tar.xz fd3c943a2dcbbadc6f09a31a55e708f7 12720 libmuscle_3.7+4565-8.debian.tar.xz Dgit: d39011bb4a8be2387eb230fb0790a37c49ce76bd debian archive/debian/3.7+4565-8 https://git.dgit.debian.org/libmuscle -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmaT+hUUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdoF2Q//VjP96O6KgSwr2NObfRhZE9xhnjUq TrGIDe63fEdv8PkpCsAj/FnGlvXImO7zN9ye5rzU5l9P9K3nvfLrO8kBTd81ZMXK 5nPE7Nz/X2XCrWFg5Cs5iNLQiIlWGv8ae0xhg4ChiyoMo9pmQRLqxTKblmGzY3zQ ff3wmrjsOzqpGcykKESSVV8jAtvf9c1T0fL+Os8z/V4FbzipWGH/zELKz2B/AFbI t2OIcNy523RA5DAbNsZ3fnm+D33vPmDlFHrF8NIH+6ACl4WFVbDdQEBshG3XY4H3 zkZAae3FKRSwcRpYtj/7/GqIyFf56jepDkfXaxU/g47jSSSS0z8gNiWi0ok8ZJzy K/f1gjePiBV/fGUBQUpSlLYev2Y1vOn5UQ4MAPOA1E9x9+Cz0tdfhRxY4xJDV/TF 6WpWpvQovvXxKDQ8eZfd97IZXKvqt60MHjUARAivqDHUYC2NN//ncTDg8aanCJPv /ZwrUR8m+aq1j27IC/6+cWeWJ7KVCGiZNFtjLqQQbjrlhe12IIMqndtXDeBv1dJE Y5XBbNLMzarY8dPXSKUs6bByWN+K85C+FUC9SFSZKzm7wiY8ed5nwfmkotJQNC7Z y18jCSiTFb72dwDgh0lSNMYDdHKN7wKGH6COhQfSga1iUSuYcRk+u1L33nVdUfO9 LLAMKS4C7/+tFTk= =riu9 -----END PGP SIGNATURE----- gpgv: Signature made Sun Jul 14 16:17:25 2024 UTC gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libmuscle_3.7+4565-8.dsc: no acceptable signature found dpkg-source: info: extracting libmuscle in /<> dpkg-source: info: unpacking libmuscle_3.7+4565.orig.tar.xz dpkg-source: info: unpacking libmuscle_3.7+4565-8.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying parsnp_changes.patch dpkg-source: info: applying drop_version_from_library_name.patch dpkg-source: info: applying makefile_deps.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.amd64 DEB_BUILD_OPTIONS=nocheck HOME=/var/lib/sbuild LANG=en_GB.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut OLDPWD=/ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/<> SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aamd64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package libmuscle dpkg-buildpackage: info: source version 3.7+4565-8 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-architecture: warning: specified GNU system type x86_64-linux-gnu does not match CC system type aarch64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'config'. libtoolize: copying file 'config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:52: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:429: AM_INIT_AUTOMAKE is expanded from... configure.ac:52: the top level configure.ac:64: warning: The macro `AM_PROG_LIBTOOL' is obsolete. configure.ac:64: You should run autoupdate. m4/libtool.m4:101: AM_PROG_LIBTOOL is expanded from... configure.ac:64: the top level configure.ac:70: warning: The macro `AC_HEADER_STDC' is obsolete. configure.ac:70: You should run autoupdate. ./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from... configure.ac:70: the top level configure.ac:103: warning: The macro `AC_HEADER_TIME' is obsolete. configure.ac:103: You should run autoupdate. ./lib/autoconf/headers.m4:743: AC_HEADER_TIME is expanded from... configure.ac:103: the top level configure.ac:111: warning: AC_OUTPUT should be used without arguments. configure.ac:111: You should run autoupdate. configure.ac:52: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.ac:52: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation configure.ac:64: installing 'config/compile' configure.ac:64: installing 'config/config.guess' configure.ac:64: installing 'config/config.sub' configure.ac:52: installing 'config/install-sh' configure.ac:52: installing 'config/missing' Makefile.am: installing './INSTALL' libMUSCLE/Makefile.am:28: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') libMUSCLE/Makefile.am: installing 'config/depcomp' dh_auto_configure -a ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu configure: loading site script /etc/dpkg-cross/cross-config.amd64 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking for x86_64-linux-gnu-g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of x86_64-linux-gnu-g++... none checking whether ln -s works... yes checking build system type... aarch64-unknown-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to enable C11 features... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking dependency style of x86_64-linux-gnu-gcc... none checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/x86_64-linux-gnu/bin/ld checking if the linker (/usr/x86_64-linux-gnu/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert aarch64-unknown-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert aarch64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/x86_64-linux-gnu/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-file... no checking for file... file configure: WARNING: using cross tools not prefixed with host triplet checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... (cached) x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for sys/time.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/x86_64-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/x86_64-linux-gnu/bin/ld -m elf_x86_64 checking if the linker (/usr/x86_64-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/x86_64-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-g++ linker (/usr/x86_64-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for egrep... (cached) /usr/bin/grep -E checking for x86_64-linux-gnu-doxygen... no checking for doxygen... no configure: WARNING: doxygen not found - will not generate any doxygen documentation checking for x86_64-linux-gnu-perl... no checking for perl... /usr/bin/perl checking for an ANSI C-conforming const... yes checking for inline... inline checking how to run the C preprocessor... x86_64-linux-gnu-gcc -E checking whether x86_64-linux-gnu-gcc needs -traditional... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating libMUSCLE/Makefile config.status: creating libMUSCLE.pc config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build -a make -j1 make[1]: Entering directory '/<>' Making all in libMUSCLE make[2]: Entering directory '/<>/libMUSCLE' x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o main.o main.cpp /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-aligngivenpath.lo `test -f 'aligngivenpath.cpp' || echo './'`aligngivenpath.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c aligngivenpath.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-aligngivenpath.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c aligngivenpath.cpp -o libMUSCLE_la-aligngivenpath.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-aligngivenpathsw.lo `test -f 'aligngivenpathsw.cpp' || echo './'`aligngivenpathsw.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c aligngivenpathsw.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-aligngivenpathsw.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c aligngivenpathsw.cpp -o libMUSCLE_la-aligngivenpathsw.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-aligntwomsas.lo `test -f 'aligntwomsas.cpp' || echo './'`aligntwomsas.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c aligntwomsas.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-aligntwomsas.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c aligntwomsas.cpp -o libMUSCLE_la-aligntwomsas.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-aligntwoprofs.lo `test -f 'aligntwoprofs.cpp' || echo './'`aligntwoprofs.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c aligntwoprofs.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-aligntwoprofs.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c aligntwoprofs.cpp -o libMUSCLE_la-aligntwoprofs.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-aln.lo `test -f 'aln.cpp' || echo './'`aln.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c aln.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-aln.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c aln.cpp -o libMUSCLE_la-aln.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-alpha.lo `test -f 'alpha.cpp' || echo './'`alpha.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c alpha.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-alpha.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c alpha.cpp -o libMUSCLE_la-alpha.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-anchoredpp.lo `test -f 'anchoredpp.cpp' || echo './'`anchoredpp.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c anchoredpp.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-anchoredpp.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c anchoredpp.cpp -o libMUSCLE_la-anchoredpp.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-anchors.lo `test -f 'anchors.cpp' || echo './'`anchors.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c anchors.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-anchors.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c anchors.cpp -o libMUSCLE_la-anchors.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-bittraceback.lo `test -f 'bittraceback.cpp' || echo './'`bittraceback.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c bittraceback.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-bittraceback.o bittraceback.cpp: In function 'const char* muscle::BitsToStr(char)': bittraceback.cpp:20:36: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 20 | static TLSstr Str("xM xD xI"); | ^~~~~~~~~~ libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c bittraceback.cpp -o libMUSCLE_la-bittraceback.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-blosumla.lo `test -f 'blosumla.cpp' || echo './'`blosumla.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c blosumla.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-blosumla.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c blosumla.cpp -o libMUSCLE_la-blosumla.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-clust.lo `test -f 'clust.cpp' || echo './'`clust.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c clust.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-clust.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c clust.cpp -o libMUSCLE_la-clust.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-cluster.lo `test -f 'cluster.cpp' || echo './'`cluster.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c cluster.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-cluster.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c cluster.cpp -o libMUSCLE_la-cluster.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-clwwt.lo `test -f 'clwwt.cpp' || echo './'`clwwt.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c clwwt.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-clwwt.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 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.libs/libMUSCLE_la-color.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c color.cpp -o libMUSCLE_la-color.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" 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diffobjscore.cpp -o libMUSCLE_la-diffobjscore.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-diffpaths.lo `test -f 'diffpaths.cpp' || echo './'`diffpaths.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" 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-D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-difftrees.lo `test -f 'difftrees.cpp' || echo './'`difftrees.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c difftrees.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-difftrees.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c difftrees.cpp -o libMUSCLE_la-difftrees.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-difftreese.lo `test -f 'difftreese.cpp' || echo './'`difftreese.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c difftreese.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-difftreese.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c difftreese.cpp -o libMUSCLE_la-difftreese.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-distcalc.lo `test -f 'distcalc.cpp' || echo './'`distcalc.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c distcalc.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-distcalc.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c distcalc.cpp -o libMUSCLE_la-distcalc.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-distfunc.lo `test -f 'distfunc.cpp' || echo './'`distfunc.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c distfunc.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-distfunc.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c distfunc.cpp -o libMUSCLE_la-distfunc.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-distpwkimura.lo `test -f 'distpwkimura.cpp' || echo './'`distpwkimura.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c distpwkimura.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-distpwkimura.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c distpwkimura.cpp -o libMUSCLE_la-distpwkimura.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 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-fcf-protection -c domuscle.cpp -o libMUSCLE_la-domuscle.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-dosp.lo `test -f 'dosp.cpp' || echo './'`dosp.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c dosp.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-dosp.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 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-fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-dpreglist.lo `test -f 'dpreglist.cpp' || echo './'`dpreglist.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c dpreglist.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-dpreglist.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c dpreglist.cpp -o libMUSCLE_la-dpreglist.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" 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-DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c drawtree.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-drawtree.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-edgelist.lo `test -f 'edgelist.cpp' || echo './'`edgelist.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c edgelist.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-edgelist.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c edgelist.cpp -o libMUSCLE_la-edgelist.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 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x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c enumtostr.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-enumtostr.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 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-ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c estring.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-estring.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c estring.cpp -o libMUSCLE_la-estring.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-fasta2.lo `test -f 'fasta2.cpp' || echo './'`fasta2.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c fasta2.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-fasta2.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 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.libs/libMUSCLE_la-fasta.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c fasta.cpp -o libMUSCLE_la-fasta.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" 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libMUSCLE_la-fastdist.lo `test -f 'fastdist.cpp' || echo './'`fastdist.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c fastdist.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-fastdist.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c fastdist.cpp -o libMUSCLE_la-fastdist.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 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-DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c fastdistkbit.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-fastdistkbit.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c fastdistkbit.cpp -o libMUSCLE_la-fastdistkbit.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" 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-flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c fastdistkmer.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-fastdistkmer.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c fastdistkmer.cpp -o libMUSCLE_la-fastdistkmer.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-fastdistmafft.lo `test -f 'fastdistmafft.cpp' || echo './'`fastdistmafft.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c fastdistmafft.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-fastdistmafft.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 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-Werror=format-security -fcf-protection -c fastdistnuc.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-fastdistnuc.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c fastdistnuc.cpp -o libMUSCLE_la-fastdistnuc.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-fastscorepath2.lo `test -f 'fastscorepath2.cpp' || echo './'`fastscorepath2.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c fastscorepath2.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-fastscorepath2.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c fastscorepath2.cpp -o libMUSCLE_la-fastscorepath2.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-finddiags.lo `test -f 'finddiags.cpp' || echo './'`finddiags.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c finddiags.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-finddiags.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c finddiags.cpp -o libMUSCLE_la-finddiags.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" 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libMUSCLE_la-glbalign352.lo `test -f 'glbalign352.cpp' || echo './'`glbalign352.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c glbalign352.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-glbalign352.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c glbalign352.cpp -o libMUSCLE_la-glbalign352.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 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-Wformat -Werror=format-security -fcf-protection -c glbalign.cpp -o libMUSCLE_la-glbalign.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-glbaligndiag.lo `test -f 'glbaligndiag.cpp' || echo './'`glbaligndiag.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c glbaligndiag.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-glbaligndiag.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 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-DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-glbalignle.lo `test -f 'glbalignle.cpp' || echo './'`glbalignle.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c glbalignle.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-glbalignle.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c glbalignle.cpp -o libMUSCLE_la-glbalignle.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-glbalignsimple.lo `test -f 'glbalignsimple.cpp' || echo './'`glbalignsimple.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c glbalignsimple.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-glbalignsimple.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 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-fcf-protection -c glbalignsp.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-glbalignsp.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c glbalignsp.cpp -o libMUSCLE_la-glbalignsp.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-glbalignspn.lo `test -f 'glbalignspn.cpp' || echo './'`glbalignspn.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c glbalignspn.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-glbalignspn.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-glbalignss.lo `test -f 'glbalignss.cpp' || echo './'`glbalignss.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c glbalignss.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-glbalignss.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c glbalignss.cpp -o libMUSCLE_la-glbalignss.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 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-flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c glbalndimer.cpp -o libMUSCLE_la-glbalndimer.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-globals.lo `test -f 'globals.cpp' || echo './'`globals.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c globals.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-globals.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 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libMUSCLE_la-globalslinux.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-globalswin32.lo `test -f 'globalswin32.cpp' || echo './'`globalswin32.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c globalswin32.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-globalswin32.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 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-Wformat -Werror=format-security -fcf-protection -c gonnet.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-gonnet.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c gonnet.cpp -o libMUSCLE_la-gonnet.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" 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-Werror=format-security -fcf-protection -c -o libMUSCLE_la-henikoffweight.lo `test -f 'henikoffweight.cpp' || echo './'`henikoffweight.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c henikoffweight.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-henikoffweight.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c henikoffweight.cpp -o libMUSCLE_la-henikoffweight.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 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libMUSCLE_la-html.lo `test -f 'html.cpp' || echo './'`html.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c html.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-html.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c html.cpp -o libMUSCLE_la-html.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 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-DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c intmath.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-intmath.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 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-DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-local.lo `test -f 'local.cpp' || echo './'`local.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c local.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-local.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c local.cpp -o libMUSCLE_la-local.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" 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-DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c makerootmsa.cpp -o libMUSCLE_la-makerootmsa.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 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-Wformat -Werror=format-security -fcf-protection -c mhack.cpp -o libMUSCLE_la-mhack.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-mpam200.lo `test -f 'mpam200.cpp' || echo './'`mpam200.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c mpam200.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-mpam200.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c msa2.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-msa2.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c msa2.cpp -o libMUSCLE_la-msa2.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-msa.lo `test -f 'msa.cpp' || echo './'`msa.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c msa.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-msa.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c msa.cpp -o libMUSCLE_la-msa.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-msadistkimura.lo `test -f 'msadistkimura.cpp' || echo './'`msadistkimura.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c msadistkimura.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-msadistkimura.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c msadistkimura.cpp -o libMUSCLE_la-msadistkimura.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-msf.lo `test -f 'msf.cpp' || echo './'`msf.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c msf.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-msf.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c msf.cpp -o libMUSCLE_la-msf.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-muscle.lo `test -f 'muscle.cpp' || echo './'`muscle.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c muscle.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-muscle.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c muscle.cpp -o libMUSCLE_la-muscle.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-muscleout.lo `test -f 'muscleout.cpp' || echo './'`muscleout.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c muscleout.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-muscleout.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c muscleout.cpp -o libMUSCLE_la-muscleout.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-nucmx.lo `test -f 'nucmx.cpp' || echo './'`nucmx.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c nucmx.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-nucmx.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c nucmx.cpp -o libMUSCLE_la-nucmx.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-nwdasimple2.lo `test -f 'nwdasimple2.cpp' || echo './'`nwdasimple2.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c nwdasimple2.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-nwdasimple2.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c nwdasimple2.cpp -o libMUSCLE_la-nwdasimple2.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" 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-ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c nwdasimple.cpp -o libMUSCLE_la-nwdasimple.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-nwdasmall.lo `test -f 'nwdasmall.cpp' || echo './'`nwdasmall.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c nwdasmall.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-nwdasmall.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c nwdasmall.cpp -o libMUSCLE_la-nwdasmall.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 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-DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c nwsmall.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-nwsmall.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 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objscore2.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-objscore2.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c objscore2.cpp -o libMUSCLE_la-objscore2.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-objscore.lo `test -f 'objscore.cpp' || echo './'`objscore.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c objscore.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-objscore.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c objscore.cpp -o libMUSCLE_la-objscore.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-objscoreda.lo `test -f 'objscoreda.cpp' || echo './'`objscoreda.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c objscoreda.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-objscoreda.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c objscoreda.cpp -o libMUSCLE_la-objscoreda.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-onexception.lo `test -f 'onexception.cpp' || echo './'`onexception.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c onexception.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-onexception.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c onexception.cpp -o libMUSCLE_la-onexception.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-options.lo `test -f 'options.cpp' || echo './'`options.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c options.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-options.o options.cpp:19:2: warning: #warning "Command-line option value storage is not OpenMP safe yet" [-Wcpp] 19 | #warning "Command-line option value storage is not OpenMP safe yet" | ^~~~~~~ libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c options.cpp -o libMUSCLE_la-options.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-outweights.lo `test -f 'outweights.cpp' || echo './'`outweights.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c outweights.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-outweights.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c outweights.cpp -o libMUSCLE_la-outweights.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-pam200mafft.lo `test -f 'pam200mafft.cpp' || echo './'`pam200mafft.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c pam200mafft.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-pam200mafft.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c pam200mafft.cpp -o libMUSCLE_la-pam200mafft.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-params.lo `test -f 'params.cpp' || echo './'`params.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c params.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-params.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c params.cpp -o libMUSCLE_la-params.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-phy2.lo `test -f 'phy2.cpp' || echo './'`phy2.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c phy2.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-phy2.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 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-fPIC -DPIC -o .libs/libMUSCLE_la-phy3.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c phy3.cpp -o libMUSCLE_la-phy3.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" 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|| echo './'`phy.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c phy.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-phy.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 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libMUSCLE_la-phyfromclust.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-phyfromfile.lo `test -f 'phyfromfile.cpp' || echo './'`phyfromfile.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c phyfromfile.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-phyfromfile.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 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-Wformat -Werror=format-security -fcf-protection -c physeq.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-physeq.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c physeq.cpp -o libMUSCLE_la-physeq.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-phytofile.lo `test -f 'phytofile.cpp' || echo './'`phytofile.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c phytofile.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-phytofile.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-posgap.lo `test -f 'posgap.cpp' || echo './'`posgap.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c posgap.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-posgap.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c posgap.cpp -o libMUSCLE_la-posgap.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-ppscore.lo `test -f 'ppscore.cpp' || echo './'`ppscore.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c ppscore.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-ppscore.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c ppscore.cpp -o libMUSCLE_la-ppscore.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-profdb.lo `test -f 'profdb.cpp' || echo './'`profdb.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c profdb.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-profdb.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c profdb.cpp -o libMUSCLE_la-profdb.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-profile.lo `test -f 'profile.cpp' || echo './'`profile.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c profile.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-profile.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c profile.cpp -o libMUSCLE_la-profile.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-profilefrommsa.lo `test -f 'profilefrommsa.cpp' || echo './'`profilefrommsa.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c profilefrommsa.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-profilefrommsa.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c profilefrommsa.cpp -o libMUSCLE_la-profilefrommsa.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-progalign.lo `test -f 'progalign.cpp' || echo './'`progalign.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c progalign.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-progalign.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c progalign.cpp -o libMUSCLE_la-progalign.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-progress.lo `test -f 'progress.cpp' || echo './'`progress.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c progress.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-progress.o progress.cpp:11:2: warning: #warning "progress indicators have not been made parallel-safe yet" [-Wcpp] 11 | #warning "progress indicators have not been made parallel-safe yet" | ^~~~~~~ libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c progress.cpp -o libMUSCLE_la-progress.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-progressivealign.lo `test -f 'progressivealign.cpp' || echo './'`progressivealign.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c progressivealign.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-progressivealign.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c progressivealign.cpp -o libMUSCLE_la-progressivealign.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-pwpath.lo `test -f 'pwpath.cpp' || echo './'`pwpath.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c pwpath.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-pwpath.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c pwpath.cpp -o libMUSCLE_la-pwpath.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-readmx.lo `test -f 'readmx.cpp' || echo './'`readmx.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c readmx.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-readmx.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c readmx.cpp -o libMUSCLE_la-readmx.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-realigndiffs.lo `test -f 'realigndiffs.cpp' || echo './'`realigndiffs.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c realigndiffs.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-realigndiffs.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c realigndiffs.cpp -o libMUSCLE_la-realigndiffs.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-realigndiffse.lo `test -f 'realigndiffse.cpp' || echo './'`realigndiffse.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c realigndiffse.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-realigndiffse.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c realigndiffse.cpp -o libMUSCLE_la-realigndiffse.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 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refine.cpp -o libMUSCLE_la-refine.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-refinehoriz.lo `test -f 'refinehoriz.cpp' || echo './'`refinehoriz.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c refinehoriz.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-refinehoriz.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c refinesubfams.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-refinesubfams.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c refinesubfams.cpp -o libMUSCLE_la-refinesubfams.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-refinetree.lo `test -f 'refinetree.cpp' || echo './'`refinetree.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c refinetree.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-refinetree.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c refinetree.cpp -o libMUSCLE_la-refinetree.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-refinetreee.lo `test -f 'refinetreee.cpp' || echo './'`refinetreee.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c refinetreee.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-refinetreee.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c refinetreee.cpp -o libMUSCLE_la-refinetreee.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-refinevert.lo `test -f 'refinevert.cpp' || echo './'`refinevert.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c refinevert.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-refinevert.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops 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-Werror=format-security -fcf-protection -c -o libMUSCLE_la-refinew.lo `test -f 'refinew.cpp' || echo './'`refinew.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c refinew.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-refinew.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c refinew.cpp -o libMUSCLE_la-refinew.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-savebest.lo `test -f 'savebest.cpp' || echo './'`savebest.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c savebest.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-savebest.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c savebest.cpp -o libMUSCLE_la-savebest.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-scoregaps.lo `test -f 'scoregaps.cpp' || echo './'`scoregaps.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c scoregaps.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-scoregaps.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c scoregaps.cpp -o libMUSCLE_la-scoregaps.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-scorehistory.lo `test -f 'scorehistory.cpp' || echo './'`scorehistory.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c scorehistory.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-scorehistory.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c scorehistory.cpp -o libMUSCLE_la-scorehistory.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-scorepp.lo `test -f 'scorepp.cpp' || echo './'`scorepp.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c scorepp.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-scorepp.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c scorepp.cpp -o libMUSCLE_la-scorepp.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-seq.lo `test -f 'seq.cpp' || echo './'`seq.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c seq.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-seq.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c seq.cpp -o libMUSCLE_la-seq.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-seqvect.lo `test -f 'seqvect.cpp' || echo './'`seqvect.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c seqvect.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-seqvect.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c seqvect.cpp -o libMUSCLE_la-seqvect.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-setblosumweights.lo `test -f 'setblosumweights.cpp' || echo './'`setblosumweights.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c setblosumweights.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-setblosumweights.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c setblosumweights.cpp -o libMUSCLE_la-setblosumweights.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-setgscweights.lo `test -f 'setgscweights.cpp' || echo './'`setgscweights.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c setgscweights.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-setgscweights.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c setgscweights.cpp -o libMUSCLE_la-setgscweights.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-setnewhandler.lo `test -f 'setnewhandler.cpp' || echo './'`setnewhandler.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c setnewhandler.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-setnewhandler.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c setnewhandler.cpp -o libMUSCLE_la-setnewhandler.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-spfast.lo `test -f 'spfast.cpp' || echo './'`spfast.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c spfast.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-spfast.o spfast.cpp: In function 'char* muscle::GapTypeToStr(int)': spfast.cpp:20:25: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 20 | case LL: return "LL"; | ^~~~ spfast.cpp:21:25: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 21 | case LG: return "LG"; | ^~~~ spfast.cpp:22:25: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 22 | case GL: return "GL"; | ^~~~ spfast.cpp:23:25: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 23 | case GG: return "GG"; | ^~~~ spfast.cpp:26:16: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 26 | return "?"; | ^~~ libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c spfast.cpp -o libMUSCLE_la-spfast.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-sptest.lo `test -f 'sptest.cpp' || echo './'`sptest.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c sptest.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-sptest.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c sptest.cpp -o libMUSCLE_la-sptest.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-stabilize.lo `test -f 'stabilize.cpp' || echo './'`stabilize.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c stabilize.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-stabilize.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c stabilize.cpp -o libMUSCLE_la-stabilize.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-subfam.lo `test -f 'subfam.cpp' || echo './'`subfam.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c subfam.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-subfam.o subfam.cpp: In function 'void muscle::AlignSubFam(SeqVect&, const Tree&, unsigned int, MSA&)': subfam.cpp:175:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 175 | system(CmdLine); | ~~~~~~^~~~~~~~~ libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c subfam.cpp -o libMUSCLE_la-subfam.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-subfams.lo `test -f 'subfams.cpp' || echo './'`subfams.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c subfams.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-subfams.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c subfams.cpp -o libMUSCLE_la-subfams.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-sw.lo `test -f 'sw.cpp' || echo './'`sw.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c sw.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-sw.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c sw.cpp -o libMUSCLE_la-sw.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-termgaps.lo `test -f 'termgaps.cpp' || echo './'`termgaps.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c termgaps.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-termgaps.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 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-ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-textfile.lo `test -f 'textfile.cpp' || echo './'`textfile.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c textfile.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-textfile.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c textfile.cpp -o libMUSCLE_la-textfile.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-threewaywt.lo `test -f 'threewaywt.cpp' || echo './'`threewaywt.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c threewaywt.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-threewaywt.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c threewaywt.cpp -o libMUSCLE_la-threewaywt.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-traceback.lo `test -f 'traceback.cpp' || echo './'`traceback.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c traceback.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-traceback.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c traceback.cpp -o libMUSCLE_la-traceback.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-tracebackopt.lo `test -f 'tracebackopt.cpp' || echo './'`tracebackopt.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c tracebackopt.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-tracebackopt.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c tracebackopt.cpp -o libMUSCLE_la-tracebackopt.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-tracebacksw.lo `test -f 'tracebacksw.cpp' || echo './'`tracebacksw.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c tracebacksw.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-tracebacksw.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c tracebacksw.cpp -o libMUSCLE_la-tracebacksw.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-treefrommsa.lo `test -f 'treefrommsa.cpp' || echo './'`treefrommsa.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c treefrommsa.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-treefrommsa.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c treefrommsa.cpp -o libMUSCLE_la-treefrommsa.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-typetostr.lo `test -f 'typetostr.cpp' || echo './'`typetostr.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c typetostr.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-typetostr.o typetostr.cpp: In function 'const char* muscle::SecsToStr(long unsigned int)': typetostr.cpp:15:32: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] 15 | sprintf(Str.get(), "%02d:%02d:%02d", hh, mm, ss); | ~~~^ ~~ | | | | int long int | %02ld typetostr.cpp:15:37: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] 15 | sprintf(Str.get(), "%02d:%02d:%02d", hh, mm, ss); | ~~~^ ~~ | | | | int long int | %02ld typetostr.cpp:15:42: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long int' [-Wformat=] 15 | sprintf(Str.get(), "%02d:%02d:%02d", hh, mm, ss); | ~~~^ ~~ | | | | int long int | %02ld libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c typetostr.cpp -o libMUSCLE_la-typetostr.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-upgma2.lo `test -f 'upgma2.cpp' || echo './'`upgma2.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c upgma2.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-upgma2.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c upgma2.cpp -o libMUSCLE_la-upgma2.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-usage.lo `test -f 'usage.cpp' || echo './'`usage.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c usage.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-usage.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c usage.cpp -o libMUSCLE_la-usage.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-validateids.lo `test -f 'validateids.cpp' || echo './'`validateids.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c validateids.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-validateids.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 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-ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-vtml2.lo `test -f 'vtml2.cpp' || echo './'`vtml2.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c vtml2.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-vtml2.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c vtml2.cpp -o libMUSCLE_la-vtml2.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o libMUSCLE_la-writescorefile.lo `test -f 'writescorefile.cpp' || echo './'`writescorefile.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c writescorefile.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-writescorefile.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops 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-Werror=format-security -fcf-protection -c -o libMUSCLE_la-blosum62.lo `test -f 'blosum62.cpp' || echo './'`blosum62.cpp libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c blosum62.cpp -fPIC -DPIC -o .libs/libMUSCLE_la-blosum62.o libtool: compile: x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_SYS_TIME_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DTIME_WITH_SYS_TIME=1 -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -D_LIB -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c blosum62.cpp -o libMUSCLE_la-blosum62.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 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.libs/libMUSCLE_la-aligntwoprofs.o .libs/libMUSCLE_la-aln.o .libs/libMUSCLE_la-alpha.o .libs/libMUSCLE_la-anchoredpp.o .libs/libMUSCLE_la-anchors.o .libs/libMUSCLE_la-bittraceback.o .libs/libMUSCLE_la-blosumla.o .libs/libMUSCLE_la-clust.o .libs/libMUSCLE_la-cluster.o .libs/libMUSCLE_la-clwwt.o .libs/libMUSCLE_la-color.o .libs/libMUSCLE_la-cons.o .libs/libMUSCLE_la-diaglist.o .libs/libMUSCLE_la-diffobjscore.o .libs/libMUSCLE_la-diffpaths.o .libs/libMUSCLE_la-difftrees.o .libs/libMUSCLE_la-difftreese.o .libs/libMUSCLE_la-distcalc.o .libs/libMUSCLE_la-distfunc.o .libs/libMUSCLE_la-distpwkimura.o .libs/libMUSCLE_la-domuscle.o .libs/libMUSCLE_la-dosp.o .libs/libMUSCLE_la-dpreglist.o .libs/libMUSCLE_la-drawtree.o .libs/libMUSCLE_la-edgelist.o .libs/libMUSCLE_la-enumopts.o .libs/libMUSCLE_la-enumtostr.o .libs/libMUSCLE_la-estring.o .libs/libMUSCLE_la-fasta2.o .libs/libMUSCLE_la-fasta.o .libs/libMUSCLE_la-fastclust.o .libs/libMUSCLE_la-fastdist.o .libs/libMUSCLE_la-fastdistjones.o .libs/libMUSCLE_la-fastdistkbit.o .libs/libMUSCLE_la-fastdistkmer.o .libs/libMUSCLE_la-fastdistmafft.o .libs/libMUSCLE_la-fastdistnuc.o .libs/libMUSCLE_la-fastscorepath2.o .libs/libMUSCLE_la-finddiags.o .libs/libMUSCLE_la-finddiagsn.o .libs/libMUSCLE_la-glbalign352.o .libs/libMUSCLE_la-glbalign.o .libs/libMUSCLE_la-glbaligndiag.o .libs/libMUSCLE_la-glbalignle.o .libs/libMUSCLE_la-glbalignsimple.o .libs/libMUSCLE_la-glbalignsp.o .libs/libMUSCLE_la-glbalignspn.o .libs/libMUSCLE_la-glbalignss.o .libs/libMUSCLE_la-glbalndimer.o .libs/libMUSCLE_la-globals.o .libs/libMUSCLE_la-globalslinux.o .libs/libMUSCLE_la-globalswin32.o .libs/libMUSCLE_la-gonnet.o .libs/libMUSCLE_la-gotowt.o .libs/libMUSCLE_la-henikoffweight.o .libs/libMUSCLE_la-henikoffweightpb.o .libs/libMUSCLE_la-html.o .libs/libMUSCLE_la-hydro.o .libs/libMUSCLE_la-intmath.o .libs/libMUSCLE_la-local.o .libs/libMUSCLE_la-makerootmsab.o .libs/libMUSCLE_la-makerootmsa.o .libs/libMUSCLE_la-mhack.o .libs/libMUSCLE_la-mpam200.o .libs/libMUSCLE_la-msa2.o .libs/libMUSCLE_la-msa.o .libs/libMUSCLE_la-msadistkimura.o .libs/libMUSCLE_la-msf.o .libs/libMUSCLE_la-muscle.o .libs/libMUSCLE_la-muscleout.o .libs/libMUSCLE_la-nucmx.o .libs/libMUSCLE_la-nwdasimple2.o .libs/libMUSCLE_la-nwdasimple.o .libs/libMUSCLE_la-nwdasmall.o .libs/libMUSCLE_la-nwrec.o .libs/libMUSCLE_la-nwsmall.o .libs/libMUSCLE_la-objscore2.o .libs/libMUSCLE_la-objscore.o .libs/libMUSCLE_la-objscoreda.o .libs/libMUSCLE_la-onexception.o .libs/libMUSCLE_la-options.o .libs/libMUSCLE_la-outweights.o .libs/libMUSCLE_la-pam200mafft.o .libs/libMUSCLE_la-params.o .libs/libMUSCLE_la-phy2.o .libs/libMUSCLE_la-phy3.o .libs/libMUSCLE_la-phy4.o .libs/libMUSCLE_la-phy.o .libs/libMUSCLE_la-phyfromclust.o .libs/libMUSCLE_la-phyfromfile.o .libs/libMUSCLE_la-physeq.o .libs/libMUSCLE_la-phytofile.o .libs/libMUSCLE_la-posgap.o .libs/libMUSCLE_la-ppscore.o .libs/libMUSCLE_la-profdb.o .libs/libMUSCLE_la-profile.o .libs/libMUSCLE_la-profilefrommsa.o .libs/libMUSCLE_la-progalign.o .libs/libMUSCLE_la-progress.o .libs/libMUSCLE_la-progressivealign.o .libs/libMUSCLE_la-pwpath.o .libs/libMUSCLE_la-readmx.o .libs/libMUSCLE_la-realigndiffs.o .libs/libMUSCLE_la-realigndiffse.o .libs/libMUSCLE_la-refine.o .libs/libMUSCLE_la-refinehoriz.o .libs/libMUSCLE_la-refinesubfams.o .libs/libMUSCLE_la-refinetree.o .libs/libMUSCLE_la-refinetreee.o .libs/libMUSCLE_la-refinevert.o .libs/libMUSCLE_la-refinew.o .libs/libMUSCLE_la-savebest.o .libs/libMUSCLE_la-scoregaps.o .libs/libMUSCLE_la-scorehistory.o .libs/libMUSCLE_la-scorepp.o .libs/libMUSCLE_la-seq.o .libs/libMUSCLE_la-seqvect.o .libs/libMUSCLE_la-setblosumweights.o .libs/libMUSCLE_la-setgscweights.o .libs/libMUSCLE_la-setnewhandler.o .libs/libMUSCLE_la-spfast.o .libs/libMUSCLE_la-sptest.o .libs/libMUSCLE_la-stabilize.o .libs/libMUSCLE_la-subfam.o .libs/libMUSCLE_la-subfams.o .libs/libMUSCLE_la-sw.o .libs/libMUSCLE_la-termgaps.o .libs/libMUSCLE_la-textfile.o .libs/libMUSCLE_la-threewaywt.o .libs/libMUSCLE_la-traceback.o .libs/libMUSCLE_la-tracebackopt.o .libs/libMUSCLE_la-tracebacksw.o .libs/libMUSCLE_la-treefrommsa.o .libs/libMUSCLE_la-typetostr.o .libs/libMUSCLE_la-upgma2.o .libs/libMUSCLE_la-usage.o .libs/libMUSCLE_la-validateids.o .libs/libMUSCLE_la-vtml2.o .libs/libMUSCLE_la-writescorefile.o .libs/libMUSCLE_la-blosum62.o .libs/libMUSCLE_la-globalsother.o .libs/libMUSCLE_la-maketree.o .libs/libMUSCLE_la-scoredist.o .libs/libMUSCLE_la-tomhydro.o -L/usr/lib/gcc-cross/x86_64-linux-gnu/14 -L/usr/lib/gcc-cross/x86_64-linux-gnu/14/../../../../x86_64-linux-gnu/lib/../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc-cross/x86_64-linux-gnu/14/../../../../x86_64-linux-gnu/lib -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc-cross/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc-cross/x86_64-linux-gnu/14/../../../../x86_64-linux-gnu/lib/../lib/crtn.o -O2 -fopenmp -g -O2 -flto=auto -fstack-protector-strong -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -fopenmp -Wl,-soname -Wl,libMUSCLE.so.1 -o .libs/libMUSCLE.so.1.0.0 glbalignle.cpp:10:8: warning: type 'struct DP_MEMORY' violates the C++ One Definition Rule [-Wodr] 10 | struct DP_MEMORY | ^ glbalignsp.cpp:8:8: note: a different type is defined in another translation unit 8 | struct DP_MEMORY | ^ glbalignle.cpp:25:17: note: the first difference of corresponding definitions is field 'OccA' 25 | FCOUNT *OccA; | ^ glbalignsp.cpp:22:20: note: a field with different name is defined in another translation unit 22 | unsigned **SortOrderA; | ^ ../libMUSCLE/threadstorage.h:25:7: warning: type 'struct TLS' violates the C++ One Definition Rule [-Wodr] 25 | class TLS | ^ ../libMUSCLE/threadstorage.h:25:7: note: a different type is defined in another translation unit 25 | class TLS | ^ ../libMUSCLE/threadstorage.h:41:11: note: the first difference of corresponding definitions is field 't' 41 | T t[MAX_THREAD_COUNT]; | ^ ../libMUSCLE/threadstorage.h:41:11: note: a field of same name but different type is defined in another translation unit 41 | T t[MAX_THREAD_COUNT]; | ^ glbalignle.cpp:10:8: note: type 'struct DP_MEMORY' itself violates the C++ One Definition Rule 10 | struct DP_MEMORY | ^ glbalignsp.cpp:8:8: note: the incompatible type is defined here 8 | struct DP_MEMORY | ^ libtool: link: (cd ".libs" && rm -f "libMUSCLE.so.1" && ln -s "libMUSCLE.so.1.0.0" "libMUSCLE.so.1") libtool: link: (cd ".libs" && rm -f "libMUSCLE.so" && ln -s "libMUSCLE.so.1.0.0" "libMUSCLE.so") libtool: link: x86_64-linux-gnu-ar cr .libs/libMUSCLE.a libMUSCLE_la-aligngivenpath.o libMUSCLE_la-aligngivenpathsw.o libMUSCLE_la-aligntwomsas.o libMUSCLE_la-aligntwoprofs.o libMUSCLE_la-aln.o libMUSCLE_la-alpha.o libMUSCLE_la-anchoredpp.o libMUSCLE_la-anchors.o libMUSCLE_la-bittraceback.o libMUSCLE_la-blosumla.o libMUSCLE_la-clust.o libMUSCLE_la-cluster.o libMUSCLE_la-clwwt.o libMUSCLE_la-color.o libMUSCLE_la-cons.o libMUSCLE_la-diaglist.o libMUSCLE_la-diffobjscore.o libMUSCLE_la-diffpaths.o libMUSCLE_la-difftrees.o libMUSCLE_la-difftreese.o libMUSCLE_la-distcalc.o libMUSCLE_la-distfunc.o libMUSCLE_la-distpwkimura.o libMUSCLE_la-domuscle.o libMUSCLE_la-dosp.o libMUSCLE_la-dpreglist.o libMUSCLE_la-drawtree.o libMUSCLE_la-edgelist.o libMUSCLE_la-enumopts.o libMUSCLE_la-enumtostr.o libMUSCLE_la-estring.o libMUSCLE_la-fasta2.o libMUSCLE_la-fasta.o libMUSCLE_la-fastclust.o libMUSCLE_la-fastdist.o libMUSCLE_la-fastdistjones.o libMUSCLE_la-fastdistkbit.o libMUSCLE_la-fastdistkmer.o libMUSCLE_la-fastdistmafft.o libMUSCLE_la-fastdistnuc.o libMUSCLE_la-fastscorepath2.o libMUSCLE_la-finddiags.o libMUSCLE_la-finddiagsn.o libMUSCLE_la-glbalign352.o libMUSCLE_la-glbalign.o libMUSCLE_la-glbaligndiag.o libMUSCLE_la-glbalignle.o libMUSCLE_la-glbalignsimple.o libMUSCLE_la-glbalignsp.o libMUSCLE_la-glbalignspn.o libMUSCLE_la-glbalignss.o libMUSCLE_la-glbalndimer.o libMUSCLE_la-globals.o libMUSCLE_la-globalslinux.o libMUSCLE_la-globalswin32.o libMUSCLE_la-gonnet.o libMUSCLE_la-gotowt.o libMUSCLE_la-henikoffweight.o libMUSCLE_la-henikoffweightpb.o libMUSCLE_la-html.o libMUSCLE_la-hydro.o libMUSCLE_la-intmath.o libMUSCLE_la-local.o libMUSCLE_la-makerootmsab.o libMUSCLE_la-makerootmsa.o libMUSCLE_la-mhack.o libMUSCLE_la-mpam200.o libMUSCLE_la-msa2.o libMUSCLE_la-msa.o libMUSCLE_la-msadistkimura.o libMUSCLE_la-msf.o libMUSCLE_la-muscle.o libMUSCLE_la-muscleout.o libMUSCLE_la-nucmx.o libMUSCLE_la-nwdasimple2.o libMUSCLE_la-nwdasimple.o libMUSCLE_la-nwdasmall.o libMUSCLE_la-nwrec.o libMUSCLE_la-nwsmall.o libMUSCLE_la-objscore2.o libMUSCLE_la-objscore.o libMUSCLE_la-objscoreda.o libMUSCLE_la-onexception.o libMUSCLE_la-options.o libMUSCLE_la-outweights.o libMUSCLE_la-pam200mafft.o libMUSCLE_la-params.o libMUSCLE_la-phy2.o libMUSCLE_la-phy3.o libMUSCLE_la-phy4.o libMUSCLE_la-phy.o libMUSCLE_la-phyfromclust.o libMUSCLE_la-phyfromfile.o libMUSCLE_la-physeq.o libMUSCLE_la-phytofile.o libMUSCLE_la-posgap.o libMUSCLE_la-ppscore.o libMUSCLE_la-profdb.o libMUSCLE_la-profile.o libMUSCLE_la-profilefrommsa.o libMUSCLE_la-progalign.o libMUSCLE_la-progress.o libMUSCLE_la-progressivealign.o libMUSCLE_la-pwpath.o libMUSCLE_la-readmx.o libMUSCLE_la-realigndiffs.o libMUSCLE_la-realigndiffse.o libMUSCLE_la-refine.o libMUSCLE_la-refinehoriz.o libMUSCLE_la-refinesubfams.o libMUSCLE_la-refinetree.o libMUSCLE_la-refinetreee.o libMUSCLE_la-refinevert.o libMUSCLE_la-refinew.o libMUSCLE_la-savebest.o libMUSCLE_la-scoregaps.o libMUSCLE_la-scorehistory.o libMUSCLE_la-scorepp.o libMUSCLE_la-seq.o libMUSCLE_la-seqvect.o libMUSCLE_la-setblosumweights.o libMUSCLE_la-setgscweights.o libMUSCLE_la-setnewhandler.o libMUSCLE_la-spfast.o libMUSCLE_la-sptest.o libMUSCLE_la-stabilize.o libMUSCLE_la-subfam.o libMUSCLE_la-subfams.o libMUSCLE_la-sw.o libMUSCLE_la-termgaps.o libMUSCLE_la-textfile.o libMUSCLE_la-threewaywt.o libMUSCLE_la-traceback.o libMUSCLE_la-tracebackopt.o libMUSCLE_la-tracebacksw.o libMUSCLE_la-treefrommsa.o libMUSCLE_la-typetostr.o libMUSCLE_la-upgma2.o libMUSCLE_la-usage.o libMUSCLE_la-validateids.o libMUSCLE_la-vtml2.o libMUSCLE_la-writescorefile.o libMUSCLE_la-blosum62.o libMUSCLE_la-globalsother.o libMUSCLE_la-maketree.o libMUSCLE_la-scoredist.o libMUSCLE_la-tomhydro.o libtool: link: x86_64-linux-gnu-ranlib .libs/libMUSCLE.a libtool: link: ( cd ".libs" && rm -f "libMUSCLE.la" && ln -s "../libMUSCLE.la" "libMUSCLE.la" ) /bin/bash ../libtool --tag=CXX --mode=link x86_64-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -o muscle main.o libMUSCLE.la libtool: link: x86_64-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DNDEBUG=1 -fopenmp -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -flto=auto -ffat-lto-objects -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/muscle main.o ./.libs/libMUSCLE.so -fopenmp make[2]: Leaving directory '/<>/libMUSCLE' make[2]: Entering directory '/<>' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/libmuscle-3.7\+4565/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in libMUSCLE make[2]: Entering directory '/<>/libMUSCLE' make[3]: Entering directory '/<>/libMUSCLE' /usr/bin/mkdir -p '/<>/debian/tmp/usr/lib/x86_64-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libMUSCLE.la '/<>/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libMUSCLE.so.1.0.0 /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libMUSCLE.so.1.0.0 libtool: install: (cd /<>/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libMUSCLE.so.1.0.0 libMUSCLE.so.1 || { rm -f libMUSCLE.so.1 && ln -s libMUSCLE.so.1.0.0 libMUSCLE.so.1; }; }) libtool: install: (cd /<>/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libMUSCLE.so.1.0.0 libMUSCLE.so || { rm -f libMUSCLE.so && ln -s libMUSCLE.so.1.0.0 libMUSCLE.so; }; }) libtool: install: /usr/bin/install -c .libs/libMUSCLE.lai /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libMUSCLE.la libtool: install: /usr/bin/install -c .libs/libMUSCLE.a /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libMUSCLE.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libMUSCLE.a libtool: install: x86_64-linux-gnu-ranlib /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libMUSCLE.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' /usr/bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c muscle '/<>/debian/tmp/usr/bin' libtool: warning: 'libMUSCLE.la' has not been installed in '/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/muscle /<>/debian/tmp/usr/bin/muscle /usr/bin/mkdir -p '/<>/debian/tmp/usr/include/libMUSCLE' /usr/bin/install -c -m 644 alpha.h cluster.h clust.h clustsetdf.h clustset.h clustsetmsa.h diaglist.h distcalc.h distfunc.h dpregionlist.h dpreglist.h edgelist.h enumopts.h enums.h estring.h gapscoredimer.h gonnet.h intmath.h msadist.h msa.h muscle.h objscore.h params.h profile.h pwpath.h refine.h scorehistory.h seq.h seqvect.h textfile.h timing.h tree.h types.h unixio.h threadstorage.h '/<>/debian/tmp/usr/include/libMUSCLE' make[3]: Leaving directory '/<>/libMUSCLE' make[2]: Leaving directory '/<>/libMUSCLE' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/<>/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig' /usr/bin/install -c -m 644 libMUSCLE.pc '/<>/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/tmp/usr/include/* usr/include \ --movedev "debian/tmp/usr/lib/*/pkgconfig/*.pc" usr/lib/x86_64-linux-gnu/pkgconfig \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility set -e install -d -m 755 debian/libmuscle-dev/usr/lib/x86_64-linux-gnu install -d -m 755 debian/libmuscle1/usr/lib/x86_64-linux-gnu mv debian/tmp/usr/lib/x86_64-linux-gnu/libMUSCLE.a debian/libmuscle-dev/usr/lib/x86_64-linux-gnu mv debian/tmp/usr/lib/x86_64-linux-gnu/libMUSCLE.so debian/libmuscle-dev/usr/lib/x86_64-linux-gnu mv /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libMUSCLE.so.1 debian/libmuscle1/usr/lib/x86_64-linux-gnu mv /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libMUSCLE.so.1.0.0 debian/libmuscle1/usr/lib/x86_64-linux-gnu PKGDEV=libmuscle-dev PKGSHL=libmuscle1 install -d -m 755 debian/libmuscle-dev/usr/include mv debian/tmp/usr/include/libMUSCLE debian/libmuscle-dev/usr/include install -d -m 755 debian/libmuscle-dev/usr/lib/x86_64-linux-gnu/pkgconfig mv debian/tmp/usr/lib/*/pkgconfig/*.pc debian/libmuscle-dev/usr/lib/x86_64-linux-gnu/pkgconfig dh_link -plibmuscle1 usr/lib/x86_64-linux-gnu/libMUSCLE.so.1 usr/lib/x86_64-linux-gnu/libMUSCLE-3.7.so.1 find debian -name "lib*.la" -delete # The binary is taken rather from the package muscle rm -rf debian/tmp/usr/bin/muscle make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dpkg-gensymbols: warning: debian/libmuscle1/DEBIAN/symbols doesn't match completely debian/libmuscle1.symbols --- debian/libmuscle1.symbols (libmuscle1_3.7+4565-8_amd64) +++ dpkg-gensymbolsAERUyx 2024-08-10 22:39:38.206950753 +0000 @@ -2,11 +2,11 @@ * Build-Depends-Package: libmuscle-dev _ZN6muscle10ALPHAToStrENS_5ALPHAE@Base 3.7+4565 _ZN6muscle10ALPHA_OptsE@Base 3.7+4565 - (optional)_ZN6muscle10ClustSetDF11ComputeDistERKNS_5ClustEjj@Base 3.7+4565 - (optional)_ZN6muscle10ClustSetDF11GetLeafNameEj@Base 3.7+4565 - (optional)_ZN6muscle10ClustSetDF12GetLeafCountEv@Base 3.7+4565 - (optional)_ZN6muscle10ClustSetDF9GetLeafIdEj@Base 3.7+4565 - (optional)_ZN6muscle10ClustSetDF9JoinNodesERKNS_5ClustEjjjPdS4_@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZN6muscle10ClustSetDF11ComputeDistERKNS_5ClustEjj@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZN6muscle10ClustSetDF11GetLeafNameEj@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZN6muscle10ClustSetDF12GetLeafCountEv@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZN6muscle10ClustSetDF9GetLeafIdEj@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZN6muscle10ClustSetDF9JoinNodesERKNS_5ClustEjjjPdS4_@Base 3.7+4565 _ZN6muscle10CountKmersEPKhjPh@Base 3.7+4565 _ZN6muscle10DiffTreesEERKNS_4TreeES2_Pj@Base 3.7+4565 _ZN6muscle10DistCalcDF4InitERKNS_8DistFuncE@Base 3.7+4565 @@ -50,11 +50,11 @@ _ZN6muscle11AlignSubFamERNS_7SeqVectERKNS_4TreeEjRNS_3MSAE@Base 3.7+4565 _ZN6muscle11AssertMSAEqERKNS_3MSAES2_@Base 3.7+4565 _ZN6muscle11CheckMemUseEv@Base 3.7+4565 - (optional)_ZN6muscle11ClustSetMSA11ComputeDistERKNS_5ClustEjj@Base 3.7+4565 - (optional)_ZN6muscle11ClustSetMSA11GetLeafNameEj@Base 3.7+4565 - (optional)_ZN6muscle11ClustSetMSA12GetLeafCountEv@Base 3.7+4565 - (optional)_ZN6muscle11ClustSetMSA9GetLeafIdEj@Base 3.7+4565 - (optional)_ZN6muscle11ClustSetMSA9JoinNodesERKNS_5ClustEjjjPdS4_@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZN6muscle11ClustSetMSA11ComputeDistERKNS_5ClustEjj@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZN6muscle11ClustSetMSA11GetLeafNameEj@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZN6muscle11ClustSetMSA12GetLeafCountEv@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZN6muscle11ClustSetMSA9GetLeafIdEj@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZN6muscle11ClustSetMSA9JoinNodesERKNS_5ClustEjjjPdS4_@Base 3.7+4565 _ZN6muscle11ClusterTree14AddToDisjointsEPNS_11ClusterNodeE@Base 3.7+4565 _ZN6muscle11ClusterTree19DeleteFromDisjointsEPNS_11ClusterNodeE@Base 3.7+4565 _ZN6muscle11ClusterTree6CreateERKNS_8DistFuncE@Base 3.7+4565 @@ -403,9 +403,9 @@ _ZN6muscle3Seq7ToUpperEv@Base 3.7+4565 _ZN6muscle3Seq8FixAlphaEv@Base 3.7+4565 _ZN6muscle3Seq9StripGapsEv@Base 3.7+4565 - (optional)_ZN6muscle3SeqD0Ev@Base 3.7+4565 - (optional)_ZN6muscle3SeqD1Ev@Base 3.7+4565 - (optional)_ZN6muscle3SeqD2Ev@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZN6muscle3SeqD0Ev@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZN6muscle3SeqD1Ev@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZN6muscle3SeqD2Ev@Base 3.7+4565 _ZN6muscle3lp2Ed@Base 3.7+4565 _ZN6muscle4BTEqEdd@Base 3.7+4565 _ZN6muscle4DoSPEv@Base 3.7+4565 @@ -425,16 +425,16 @@ _ZN6muscle4Tree16RootUnrootedTreeENS_4ROOTE@Base 3.7+4565 _ZN6muscle4Tree20UnrootByDeletingRootEv@Base 3.7+4565 _ZN6muscle4Tree4CopyERKS0_@Base 3.7+4565 - (optional)_ZN6muscle4Tree5ClearEv@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZN6muscle4Tree5ClearEv@Base 3.7+4565 _ZN6muscle4Tree6CreateEjjPKjS2_PKfS4_S2_PPc@Base 3.7+4565 _ZN6muscle4Tree8FromFileERNS_8TextFileE@Base 3.7+4565 _ZN6muscle4Tree9FromClustERNS_5ClustE@Base 3.7+4565 _ZN6muscle4Tree9InitCacheEj@Base 3.7+4565 _ZN6muscle4Tree9PruneTreeERKS0_Pjj@Base 3.7+4565 _ZN6muscle4Tree9SetLeafIdEjj@Base 3.7+4565 - (optional)_ZN6muscle4TreeD0Ev@Base 3.7+4565 - (optional)_ZN6muscle4TreeD1Ev@Base 3.7+4565 - (optional)_ZN6muscle4TreeD2Ev@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZN6muscle4TreeD0Ev@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZN6muscle4TreeD1Ev@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZN6muscle4TreeD2Ev@Base 3.7+4565 _ZN6muscle4log2Ed@Base 3.7+4565 _ZN6muscle4pow2Ed@Base 3.7+4565 _ZN6muscle5BreakEv@Base 3.7+4565 @@ -684,10 +684,10 @@ _ZNK6muscle11DistCalcMSA8GetCountEv@Base 3.7+4565 _ZNK6muscle12DPRegionList5LogMeEv@Base 3.7+4565 _ZNK6muscle12DPRegionList9GetDPAreaEv@Base 3.7+4565 - (optional)_ZNK6muscle12DistCalcTest13CalcDistRangeEjPf@Base 3.7+4565 - (optional)_ZNK6muscle12DistCalcTest5GetIdEj@Base 3.7+4565 - (optional)_ZNK6muscle12DistCalcTest7GetNameEj@Base 3.7+4565 - (optional)_ZNK6muscle12DistCalcTest8GetCountEv@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZNK6muscle12DistCalcTest13CalcDistRangeEjPf@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZNK6muscle12DistCalcTest5GetIdEj@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZNK6muscle12DistCalcTest7GetNameEj@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZNK6muscle12DistCalcTest8GetCountEv@Base 3.7+4565 _ZNK6muscle12ScoreHistory5LogMeEv@Base 3.7+4565 _ZNK6muscle12ScoreHistory8GetScoreEjjbb@Base 3.7+4565 _ZNK6muscle3MSA10GetAvgConsEv@Base 3.7+4565 @@ -839,20 +839,20 @@ _ZNK6muscle8EdgeList5LogMeEv@Base 3.7+4565 _ZNK6muscle8EdgeList7GetEdgeEjPjS1_@Base 3.7+4565 _ZNK6muscle8EdgeList8GetCountEv@Base 3.7+4565 - (optional)_ZNSt6vectorIPN6muscle3SeqESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 3.7+4565 - (optional)_ZNSt6vectorIcSaIcEE17_M_realloc_insertIJRKcEEEvN9__gnu_cxx17__normal_iteratorIPcS1_EEDpOT_@Base 3.7+4565 - (optional)_ZNSt6vectorIcSaIcEE8_M_eraseEN9__gnu_cxx17__normal_iteratorIPcS1_EE@Base 3.7+4565 - (optional)_ZNSt6vectorIjSaIjEE17_M_realloc_insertIJRKjEEEvN9__gnu_cxx17__normal_iteratorIPjS1_EEDpOT_@Base 3.7+4565 - (optional)_ZNSt6vectorImSaImEE17_M_realloc_insertIJRKmEEEvN9__gnu_cxx17__normal_iteratorIPmS1_EEDpOT_@Base 3.7+4565 - (optional)_ZTIN6muscle10ClustSetDFE@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZNSt6vectorIPN6muscle3SeqESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZNSt6vectorIcSaIcEE17_M_realloc_insertIJRKcEEEvN9__gnu_cxx17__normal_iteratorIPcS1_EEDpOT_@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZNSt6vectorIcSaIcEE8_M_eraseEN9__gnu_cxx17__normal_iteratorIPcS1_EE@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZNSt6vectorIjSaIjEE17_M_realloc_insertIJRKjEEEvN9__gnu_cxx17__normal_iteratorIPjS1_EEDpOT_@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZNSt6vectorImSaImEE17_M_realloc_insertIJRKmEEEvN9__gnu_cxx17__normal_iteratorIPmS1_EEDpOT_@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZTIN6muscle10ClustSetDFE@Base 3.7+4565 _ZTIN6muscle10DistCalcDFE@Base 3.7+4565 - (optional)_ZTIN6muscle11ClustSetMSAE@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZTIN6muscle11ClustSetMSAE@Base 3.7+4565 _ZTIN6muscle11ClusterTreeE@Base 3.7+4565 _ZTIN6muscle11DistCalcMSAE@Base 3.7+4565 - (optional)_ZTIN6muscle12DistCalcTestE@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZTIN6muscle12DistCalcTestE@Base 3.7+4565 _ZTIN6muscle3MSAE@Base 3.7+4565 - (optional)_ZTIN6muscle3SeqE@Base 3.7+4565 - (optional)_ZTIN6muscle4TreeE@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZTIN6muscle3SeqE@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZTIN6muscle4TreeE@Base 3.7+4565 _ZTIN6muscle5ClustE@Base 3.7+4565 _ZTIN6muscle6PWPathE@Base 3.7+4565 _ZTIN6muscle7SeqVectE@Base 3.7+4565 @@ -886,15 +886,15 @@ _ZTSSt12_Vector_baseIcSaIcEE@Base 3.7+4565 _ZTSSt6vectorIPN6muscle3SeqESaIS2_EE@Base 3.7+4565 _ZTSSt6vectorIcSaIcEE@Base 3.7+4565 - (optional)_ZTVN6muscle10ClustSetDFE@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZTVN6muscle10ClustSetDFE@Base 3.7+4565 _ZTVN6muscle10DistCalcDFE@Base 3.7+4565 - (optional)_ZTVN6muscle11ClustSetMSAE@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZTVN6muscle11ClustSetMSAE@Base 3.7+4565 _ZTVN6muscle11ClusterTreeE@Base 3.7+4565 _ZTVN6muscle11DistCalcMSAE@Base 3.7+4565 - (optional)_ZTVN6muscle12DistCalcTestE@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZTVN6muscle12DistCalcTestE@Base 3.7+4565 _ZTVN6muscle3MSAE@Base 3.7+4565 - (optional)_ZTVN6muscle3SeqE@Base 3.7+4565 - (optional)_ZTVN6muscle4TreeE@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZTVN6muscle3SeqE@Base 3.7+4565 +#MISSING: 3.7+4565-8# (optional)_ZTVN6muscle4TreeE@Base 3.7+4565 _ZTVN6muscle5ClustE@Base 3.7+4565 _ZTVN6muscle6PWPathE@Base 3.7+4565 _ZTVN6muscle7SeqVectE@Base 3.7+4565 dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'libmuscle-dev' in '../libmuscle-dev_3.7+4565-8_amd64.deb'. dpkg-deb: building package 'libmuscle1' in '../libmuscle1_3.7+4565-8_amd64.deb'. dpkg-deb: building package 'libmuscle1-dbgsym' in '../libmuscle1-dbgsym_3.7+4565-8_amd64.deb'. dpkg-genbuildinfo --build=any -O../libmuscle_3.7+4565-8_amd64.buildinfo dpkg-genchanges --build=any -O../libmuscle_3.7+4565-8_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2024-08-10T22:39:48Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libmuscle_3.7+4565-8_amd64.changes: ----------------------------------- Format: 1.8 Date: Sun, 14 Jul 2024 18:06:32 +0200 Source: libmuscle Binary: libmuscle-dev libmuscle1 libmuscle1-dbgsym Built-For-Profiles: cross nocheck Architecture: amd64 Version: 3.7+4565-8 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: libmuscle-dev - multiple alignment development library for protein sequences libmuscle1 - multiple alignment library for protein sequences Closes: 1015504 1075190 Changes: libmuscle (3.7+4565-8) unstable; urgency=medium . [ Steffen Möller ] * Add new file with ref to conda . [ Balint Reczey ] * debian/libmuscle1.symbols: Mark symbols which were optimized away on s390x as optional (Closes: #1075190) . [ Étienne Mollier ] * d/libmuscle1.symbols: mark symbols trimmed by LTO builds as optional. (Closes: #1015504) * d/rules: force LTO builds. This is done after ensuring all reverse dependencies are still operating properly; there were a couple of dubious Muscle symbols trimmed by LTO builds, but C++ inflation of intricate symbols makes it hard to make sense whether symbols drop is harmful or not. * d/control: declare compliance to standards version 4.7.0. * d/control: add myself to uploaders. * d/control: migrate from pkg-config to pkgconf. * d/libmuscle1.lintian-overrides: delete: unused override. * d/libmuscle1.symbols: append missing Build-Depends-Package field. * d/libmuscle1.symbols: also flag a symbole formerly 32-bit only. Checksums-Sha1: 107bf083d22be434c88a07bc0b9b216edddc0232 309112 libmuscle-dev_3.7+4565-8_amd64.deb 0bfedebdb97fe2097bb9fdfa916b515df768d94d 907064 libmuscle1-dbgsym_3.7+4565-8_amd64.deb c0b7a643dc593765fdc28bfaa6df10bd43bc58f8 256212 libmuscle1_3.7+4565-8_amd64.deb bbcac78448a66f05c54a7642f428bee72a123da3 5586 libmuscle_3.7+4565-8_amd64.buildinfo Checksums-Sha256: 9fb203c98d6272780d7af40b1b182d8112681555bb869f2bdd3a462ec2bab4a9 309112 libmuscle-dev_3.7+4565-8_amd64.deb 9923e3de8c0b42e8f6d3ee8fc281cda54dfa07f39fed3e09644e696cc8eb03be 907064 libmuscle1-dbgsym_3.7+4565-8_amd64.deb 863a11755aa28ed77b33fa8fed9f6417d0d5e7730837609a49b2a361f214ae96 256212 libmuscle1_3.7+4565-8_amd64.deb 4af809d2ffe721841f9f43ed43f24300b48b2d4c293d926ec4962c384c915064 5586 libmuscle_3.7+4565-8_amd64.buildinfo Files: 99b7881c0a57937bf094ef36c8b5747a 309112 libdevel optional libmuscle-dev_3.7+4565-8_amd64.deb 1444d90acbadfd6353c2264d002a3ce3 907064 debug optional libmuscle1-dbgsym_3.7+4565-8_amd64.deb 99701b7187dbba11d5c22b57140280f2 256212 libs optional libmuscle1_3.7+4565-8_amd64.deb 98fccc8dc4b42d64e238942149519299 5586 science optional libmuscle_3.7+4565-8_amd64.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: libmuscle Binary: libmuscle-dev libmuscle1 libmuscle1-dbgsym Architecture: amd64 Version: 3.7+4565-8 Checksums-Md5: 99b7881c0a57937bf094ef36c8b5747a 309112 libmuscle-dev_3.7+4565-8_amd64.deb 1444d90acbadfd6353c2264d002a3ce3 907064 libmuscle1-dbgsym_3.7+4565-8_amd64.deb 99701b7187dbba11d5c22b57140280f2 256212 libmuscle1_3.7+4565-8_amd64.deb Checksums-Sha1: 107bf083d22be434c88a07bc0b9b216edddc0232 309112 libmuscle-dev_3.7+4565-8_amd64.deb 0bfedebdb97fe2097bb9fdfa916b515df768d94d 907064 libmuscle1-dbgsym_3.7+4565-8_amd64.deb c0b7a643dc593765fdc28bfaa6df10bd43bc58f8 256212 libmuscle1_3.7+4565-8_amd64.deb Checksums-Sha256: 9fb203c98d6272780d7af40b1b182d8112681555bb869f2bdd3a462ec2bab4a9 309112 libmuscle-dev_3.7+4565-8_amd64.deb 9923e3de8c0b42e8f6d3ee8fc281cda54dfa07f39fed3e09644e696cc8eb03be 907064 libmuscle1-dbgsym_3.7+4565-8_amd64.deb 863a11755aa28ed77b33fa8fed9f6417d0d5e7730837609a49b2a361f214ae96 256212 libmuscle1_3.7+4565-8_amd64.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Sat, 10 Aug 2024 22:39:46 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: apt (= 2.9.7), autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.22.5-2), autotools-dev (= 20220109.1), base-files (= 13.5), base-passwd (= 3.6.4), bash (= 5.2.21-2.1), binutils (= 2.43-2), binutils-aarch64-linux-gnu (= 2.43-2), binutils-common (= 2.43-2), bsdextrautils (= 2.40.2-6), bsdutils (= 1:2.40.2-6), build-essential (= 12.10), bzip2 (= 1.0.8-5.1), coreutils (= 9.4-3.1), cpp (= 4:14.1.0-2), cpp-14 (= 14.2.0-1), cpp-14-aarch64-linux-gnu (= 14.2.0-1), cpp-aarch64-linux-gnu (= 4:14.1.0-2), d-shlibs (= 0.106), dash (= 0.5.12-9), debconf (= 1.5.87), debhelper (= 13.16), debian-archive-keyring (= 2023.4), debianutils (= 5.20), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.0-1), diffutils (= 1:3.10-1), dpkg (= 1.22.11), dpkg-dev (= 1.22.11), dwz (= 0.15-1+b1), file (= 1:5.45-3), findutils (= 4.10.0-3), g++ (= 4:14.1.0-2), g++-14 (= 14.2.0-1), g++-14-aarch64-linux-gnu (= 14.2.0-1), g++-aarch64-linux-gnu (= 4:14.1.0-2), gcc (= 4:14.1.0-2), gcc-14 (= 14.2.0-1), gcc-14-aarch64-linux-gnu (= 14.2.0-1), gcc-14-base (= 14.2.0-1), gcc-aarch64-linux-gnu (= 4:14.1.0-2), gettext (= 0.22.5-2), gettext-base (= 0.22.5-2), gpgv (= 2.2.43-8), grep (= 3.11-4), groff-base (= 1.23.0-5), gzip (= 1.12-1.1), hostname (= 3.23+nmu2), init-system-helpers (= 1.66), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-2), libapt-pkg6.0t64 (= 2.9.7), libarchive-zip-perl (= 1.68-1), libasan8 (= 14.2.0-1), libatomic1 (= 14.2.0-1), libattr1 (= 1:2.5.2-1), libaudit-common (= 1:4.0.1-1), libaudit1 (= 1:4.0.1-1), libbinutils (= 2.43-2), libblkid1 (= 2.40.2-6), libbz2-1.0 (= 1.0.8-5.1), libc-bin (= 2.39-6), libc-dev-bin (= 2.39-6), libc6 (= 2.39-6), libc6-dev (= 2.39-6), libcap-ng0 (= 0.8.5-1+b1), libcap2 (= 1:2.66-5), libcc1-0 (= 14.2.0-1), libcrypt-dev (= 1:4.4.36-4), libcrypt1 (= 1:4.4.36-4), libctf-nobfd0 (= 2.43-2), libctf0 (= 2.43-2), libdb5.3t64 (= 5.3.28+dfsg2-7), libdebconfclient0 (= 0.272), libdebhelper-perl (= 13.16), libdpkg-perl (= 1.22.11), libelf1t64 (= 0.191-2), libffi8 (= 3.4.6-1), libfile-stripnondeterminism-perl (= 1.14.0-1), libgcc-14-dev (= 14.2.0-1), libgcc-s1 (= 14.2.0-1), libgcrypt20 (= 1.11.0-6), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgmp10 (= 2:6.3.0+dfsg-2+b1), libgnutls30t64 (= 3.8.6-2), libgomp1 (= 14.2.0-1), libgpg-error0 (= 1.50-3), libgprofng0 (= 2.43-2), libhogweed6t64 (= 3.10-1), libhwasan0 (= 14.2.0-1), libicu72 (= 72.1-5), libidn2-0 (= 2.3.7-2), libisl23 (= 0.26-3+b2), libitm1 (= 14.2.0-1), libjansson4 (= 2.14-2+b2), liblsan0 (= 14.2.0-1), liblz4-1 (= 1.9.4-3), liblzma5 (= 5.6.2-2), libmagic-mgc (= 1:5.45-3), libmagic1t64 (= 1:5.45-3), libmd0 (= 1.1.0-2), libmount1 (= 2.40.2-6), libmpc3 (= 1.3.1-1+b2), libmpfr6 (= 4.2.1-1+b1), libnettle8t64 (= 3.10-1), libp11-kit0 (= 0.25.5-2), libpam-modules (= 1.5.3-7), libpam-modules-bin (= 1.5.3-7), libpam-runtime (= 1.5.3-7), libpam0g (= 1.5.3-7), libpcre2-8-0 (= 10.42-4+b1), libperl5.38t64 (= 5.38.2-5), libpipeline1 (= 1.5.7-2), libpkgconf3 (= 1.8.1-3), libquadmath0 (= 14.2.0-1), libseccomp2 (= 2.5.5-1+b1), libselinux1 (= 3.5-2+b3), libsframe1 (= 2.43-2), libsmartcols1 (= 2.40.2-6), libssl3t64 (= 3.3.1-2), libstdc++-14-dev (= 14.2.0-1), libstdc++6 (= 14.2.0-1), libsystemd0 (= 256.4-2), libtasn1-6 (= 4.19.0-3+b2), libtinfo6 (= 6.5-2), libtool (= 2.4.7-7), libtsan2 (= 14.2.0-1), libubsan1 (= 14.2.0-1), libuchardet0 (= 0.0.8-1+b1), libudev1 (= 256.4-2), libunistring5 (= 1.2-1), libuuid1 (= 2.40.2-6), libxml2 (= 2.12.7+dfsg-3+b1), libxxhash0 (= 0.8.2-2+b1), libzstd1 (= 1.5.6+dfsg-1), linux-libc-dev (= 6.10.3-1), m4 (= 1.4.19-4), make (= 4.3-4.1), man-db (= 2.12.1-3), mawk (= 1.3.4.20240622-2), ncurses-base (= 6.5-2), ncurses-bin (= 6.5-2), patch (= 2.7.6-7), perl (= 5.38.2-5), perl-base (= 5.38.2-5), perl-modules-5.38 (= 5.38.2-5), pkgconf (= 1.8.1-3), pkgconf-bin (= 1.8.1-3), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.24), sysvinit-utils (= 3.10-1), tar (= 1.35+dfsg-3), util-linux (= 2.40.2-6), xz-utils (= 5.6.2-2), zlib1g (= 1:1.3.dfsg+really1.3.1-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1720973192" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libmuscle-dev_3.7+4565-8_amd64.deb ---------------------------------- new Debian package, version 2.0. size 309112 bytes: control archive=1872 bytes. 940 bytes, 24 lines control 2706 bytes, 40 lines md5sums Package: libmuscle-dev Source: libmuscle Version: 3.7+4565-8 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 1583 Depends: libmuscle1 (= 3.7+4565-8) Conflicts: libmuscle-3.7-dev Replaces: libmuscle-3.7-dev Provides: libmuscle-3.7-dev Section: libdevel Priority: optional Homepage: http://sourceforge.net/p/mauve/code/HEAD/tree/muscle/trunk/ Description: multiple alignment development library for protein sequences MUSCLE is a multiple alignment program for protein sequences. MUSCLE stands for multiple sequence comparison by log-expectation. In the authors tests, MUSCLE achieved the highest scores of all tested programs on several alignment accuracy benchmarks, and is also one of the fastest programs out there. . This library was derived from the original MUSCLE and turned into a library. . This package contains the static library and header files. drwxr-xr-x root/root 0 2024-07-14 16:06 ./ drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/ drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/include/ drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/include/libMUSCLE/ -rw-r--r-- root/root 2248 2024-07-14 16:06 ./usr/include/libMUSCLE/alpha.h -rw-r--r-- root/root 4684 2024-07-14 16:06 ./usr/include/libMUSCLE/clust.h -rw-r--r-- root/root 2392 2024-07-14 16:06 ./usr/include/libMUSCLE/cluster.h -rw-r--r-- root/root 623 2024-07-14 16:06 ./usr/include/libMUSCLE/clustset.h -rw-r--r-- root/root 1087 2024-07-14 16:06 ./usr/include/libMUSCLE/clustsetdf.h -rw-r--r-- root/root 1329 2024-07-14 16:06 ./usr/include/libMUSCLE/clustsetmsa.h -rw-r--r-- root/root 1927 2024-07-14 16:06 ./usr/include/libMUSCLE/diaglist.h -rw-r--r-- root/root 1117 2024-07-14 16:06 ./usr/include/libMUSCLE/distcalc.h -rw-r--r-- root/root 854 2024-07-14 16:06 ./usr/include/libMUSCLE/distfunc.h -rw-r--r-- root/root 1075 2024-07-14 16:06 ./usr/include/libMUSCLE/dpregionlist.h -rw-r--r-- root/root 1100 2024-07-14 16:06 ./usr/include/libMUSCLE/dpreglist.h -rw-r--r-- root/root 554 2024-07-14 16:06 ./usr/include/libMUSCLE/edgelist.h -rw-r--r-- root/root 307 2024-07-14 16:06 ./usr/include/libMUSCLE/enumopts.h -rw-r--r-- root/root 2053 2024-07-14 16:06 ./usr/include/libMUSCLE/enums.h -rw-r--r-- root/root 574 2024-07-14 16:06 ./usr/include/libMUSCLE/estring.h -rw-r--r-- root/root 2916 2024-07-14 16:06 ./usr/include/libMUSCLE/gapscoredimer.h -rw-r--r-- root/root 296 2024-07-14 16:06 ./usr/include/libMUSCLE/gonnet.h -rw-r--r-- root/root 5963 2024-07-14 16:06 ./usr/include/libMUSCLE/intmath.h -rw-r--r-- root/root 6291 2024-07-14 16:06 ./usr/include/libMUSCLE/msa.h -rw-r--r-- root/root 882 2024-07-14 16:06 ./usr/include/libMUSCLE/msadist.h -rw-r--r-- root/root 12119 2024-07-14 16:06 ./usr/include/libMUSCLE/muscle.h -rw-r--r-- root/root 1359 2024-07-14 16:06 ./usr/include/libMUSCLE/objscore.h -rw-r--r-- root/root 3555 2024-07-14 16:06 ./usr/include/libMUSCLE/params.h -rw-r--r-- root/root 4746 2024-07-14 16:06 ./usr/include/libMUSCLE/profile.h -rw-r--r-- root/root 2477 2024-07-14 16:06 ./usr/include/libMUSCLE/pwpath.h -rw-r--r-- root/root 416 2024-07-14 16:06 ./usr/include/libMUSCLE/refine.h -rw-r--r-- root/root 555 2024-07-14 16:06 ./usr/include/libMUSCLE/scorehistory.h -rw-r--r-- root/root 1915 2024-07-14 16:06 ./usr/include/libMUSCLE/seq.h -rw-r--r-- root/root 1607 2024-07-14 16:06 ./usr/include/libMUSCLE/seqvect.h -rw-r--r-- root/root 1633 2024-07-14 16:06 ./usr/include/libMUSCLE/textfile.h -rw-r--r-- root/root 1379 2024-07-14 16:06 ./usr/include/libMUSCLE/threadstorage.h -rw-r--r-- root/root 468 2024-07-14 16:06 ./usr/include/libMUSCLE/timing.h -rw-r--r-- root/root 9608 2024-07-14 16:06 ./usr/include/libMUSCLE/tree.h -rw-r--r-- root/root 2301 2024-07-14 16:06 ./usr/include/libMUSCLE/types.h -rw-r--r-- root/root 180 2024-07-14 16:06 ./usr/include/libMUSCLE/unixio.h drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/lib/ drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/lib/x86_64-linux-gnu/ -rw-r--r-- root/root 1500480 2024-07-14 16:06 ./usr/lib/x86_64-linux-gnu/libMUSCLE.a lrwxrwxrwx root/root 0 2024-07-14 16:06 ./usr/lib/x86_64-linux-gnu/libMUSCLE.so -> libMUSCLE.so.1.0.0 drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/lib/x86_64-linux-gnu/pkgconfig/ -rw-r--r-- root/root 279 2024-07-14 16:06 ./usr/lib/x86_64-linux-gnu/pkgconfig/libMUSCLE.pc drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/share/ drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/share/doc/libmuscle-dev/ -rw-r--r-- root/root 432 2024-07-14 16:06 ./usr/share/doc/libmuscle-dev/README.Debian -rw-r--r-- root/root 994 2024-07-14 16:06 ./usr/share/doc/libmuscle-dev/changelog.Debian.gz -rw-r--r-- root/root 1105 2024-07-14 16:06 ./usr/share/doc/libmuscle-dev/copyright libmuscle1-dbgsym_3.7+4565-8_amd64.deb -------------------------------------- new Debian package, version 2.0. size 907064 bytes: control archive=544 bytes. 388 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: libmuscle1-dbgsym Source: libmuscle Version: 3.7+4565-8 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 1026 Depends: libmuscle1 (= 3.7+4565-8) Section: debug Priority: optional Description: debug symbols for libmuscle1 Build-Ids: e9ab93933cd8884b2cc7a916f48690571a0abe7e drwxr-xr-x root/root 0 2024-07-14 16:06 ./ drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/ drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/lib/ drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/lib/debug/ drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/lib/debug/.build-id/e9/ -rw-r--r-- root/root 1039744 2024-07-14 16:06 ./usr/lib/debug/.build-id/e9/ab93933cd8884b2cc7a916f48690571a0abe7e.debug drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/share/ drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/share/doc/ lrwxrwxrwx root/root 0 2024-07-14 16:06 ./usr/share/doc/libmuscle1-dbgsym -> libmuscle1 libmuscle1_3.7+4565-8_amd64.deb ------------------------------- new Debian package, version 2.0. size 256212 bytes: control archive=7744 bytes. 953 bytes, 24 lines control 226 bytes, 3 lines md5sums 37 bytes, 1 lines shlibs 42090 bytes, 866 lines symbols 66 bytes, 2 lines triggers Package: libmuscle1 Source: libmuscle Version: 3.7+4565-8 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 712 Depends: libc6 (>= 2.38), libgcc-s1 (>= 3.3.1), libgomp1 (>= 4.2.1), libstdc++6 (>= 13.1) Conflicts: libmuscle-3.7-1 Replaces: libmuscle-3.7-1 Provides: libmuscle-3.7-1 Section: libs Priority: optional Homepage: http://sourceforge.net/p/mauve/code/HEAD/tree/muscle/trunk/ Description: multiple alignment library for protein sequences MUSCLE is a multiple alignment program for protein sequences. MUSCLE stands for multiple sequence comparison by log-expectation. In the authors tests, MUSCLE achieved the highest scores of all tested programs on several alignment accuracy benchmarks, and is also one of the fastest programs out there. . This library was derived from the original MUSCLE and turned into a library. . This package contains the dynamic library. drwxr-xr-x root/root 0 2024-07-14 16:06 ./ drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/ drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/lib/ drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/lib/x86_64-linux-gnu/ lrwxrwxrwx root/root 0 2024-07-14 16:06 ./usr/lib/x86_64-linux-gnu/libMUSCLE-3.7.so.1 -> libMUSCLE.so.1 lrwxrwxrwx root/root 0 2024-07-14 16:06 ./usr/lib/x86_64-linux-gnu/libMUSCLE.so.1 -> libMUSCLE.so.1.0.0 -rw-r--r-- root/root 670280 2024-07-14 16:06 ./usr/lib/x86_64-linux-gnu/libMUSCLE.so.1.0.0 drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/share/ drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-07-14 16:06 ./usr/share/doc/libmuscle1/ -rw-r--r-- root/root 992 2024-07-14 16:06 ./usr/share/doc/libmuscle1/changelog.Debian.gz -rw-r--r-- root/root 1105 2024-07-14 16:06 ./usr/share/doc/libmuscle1/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:arm64 Filtered Build-Depends: lintian:arm64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1315 B] Get:5 copy:/<>/apt_archive ./ Packages [1394 B] Fetched 3324 B in 0s (182 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following package was automatically installed and is no longer required: libbsd0 Use 'apt autoremove' to remove it. The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfile-sharedir-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8t64 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl libio-compress-brotli-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfile-sharedir-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8t64 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:amd64 t1utils unzip 0 upgraded, 131 newly installed, 0 to remove and 0 not upgraded. Need to get 12.6 MB of archives. After this operation, 52.9 MB of additional disk space will be used. 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kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 iso-codes all 4.16.0-1 [2936 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 libaliased-perl all 0.34-3 [13.5 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 libapt-pkg-perl arm64 0.1.40+b5 [63.8 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 libb-hooks-op-check-perl arm64 0.22-3+b1 [10.6 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 libdynaloader-functions-perl all 0.004-1 [12.1 kB] Get:17 http://mirror.einval.org/debian unstable/main arm64 libdevel-callchecker-perl arm64 0.009-1 [16.0 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 libparams-classify-perl arm64 0.015-2+b3 [22.3 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:20 http://mirror.einval.org/debian unstable/main arm64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:21 http://mirror.einval.org/debian unstable/main arm64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:22 http://mirror.einval.org/debian unstable/main arm64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:23 http://mirror.einval.org/debian unstable/main arm64 libvariable-magic-perl arm64 0.64-1 [43.5 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 libberkeleydb-perl arm64 0.64-2+b3 [120 kB] Get:26 http://mirror.einval.org/debian unstable/main arm64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:27 http://mirror.einval.org/debian unstable/main arm64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 liburi-perl all 5.28-1 [98.6 kB] Get:29 http://mirror.einval.org/debian unstable/main arm64 libhtml-parser-perl arm64 3.83-1 [97.2 kB] Get:30 http://mirror.einval.org/debian unstable/main arm64 libcgi-pm-perl all 4.66-1 [217 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:32 http://mirror.einval.org/debian unstable/main arm64 libclass-inspector-perl all 1.36-3 [17.5 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 libclass-xsaccessor-perl arm64 1.19-4+b3 [35.2 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 libclone-perl arm64 0.46-1+b2 [13.6 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 libconfig-tiny-perl all 2.30-1 [18.9 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libparams-util-perl arm64 1.102-3 [23.4 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 libsub-install-perl all 0.929-1 [10.5 kB] Get:39 http://mirror.einval.org/debian unstable/main arm64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:40 http://mirror.einval.org/debian unstable/main arm64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:41 http://mirror.einval.org/debian unstable/main arm64 libconst-fast-perl all 0.014-2 [8792 B] Get:42 http://mirror.einval.org/debian unstable/main arm64 libcpanel-json-xs-perl arm64 4.38-1 [127 kB] Get:43 http://mirror.einval.org/debian unstable/main arm64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:44 http://mirror.einval.org/debian unstable/main arm64 libexception-class-perl all 1.45-1 [34.6 kB] Get:45 http://mirror.einval.org/debian unstable/main arm64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:46 http://mirror.einval.org/debian unstable/main arm64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:47 http://mirror.einval.org/debian unstable/main arm64 libdata-dpath-perl all 0.59-1 [43.6 kB] Get:48 http://mirror.einval.org/debian unstable/main arm64 libdata-messagepack-perl arm64 1.02-1+b3 [31.2 kB] Get:49 http://mirror.einval.org/debian unstable/main arm64 libnet-domain-tld-perl all 1.75-3 [31.9 kB] Get:50 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:51 http://mirror.einval.org/debian unstable/main arm64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:53 http://mirror.einval.org/debian unstable/main arm64 libnetaddr-ip-perl arm64 4.079+dfsg-2+b3 [97.6 kB] Get:54 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-uri-perl all 0.07-3 [11.0 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 libdevel-size-perl arm64 0.84-1 [23.7 kB] Get:57 http://mirror.einval.org/debian unstable/main arm64 libemail-address-xs-perl arm64 1.05-1+b3 [28.3 kB] Get:58 http://mirror.einval.org/debian unstable/main arm64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:61 http://mirror.einval.org/debian unstable/main arm64 libnumber-compare-perl all 0.03-3 [6332 B] Get:62 http://mirror.einval.org/debian unstable/main arm64 libtext-glob-perl all 0.11-3 [7676 B] Get:63 http://mirror.einval.org/debian unstable/main arm64 libfile-find-rule-perl all 0.34-3 [26.6 kB] Get:64 http://mirror.einval.org/debian unstable/main arm64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:65 http://mirror.einval.org/debian unstable/main arm64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:66 http://mirror.einval.org/debian unstable/main arm64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:67 http://mirror.einval.org/debian unstable/main arm64 libfile-sharedir-perl all 1.118-3 [16.0 kB] Get:68 http://mirror.einval.org/debian unstable/main arm64 libfont-ttf-perl all 1.06-2 [318 kB] Get:69 http://mirror.einval.org/debian unstable/main arm64 libio-html-perl all 1.004-3 [16.2 kB] Get:70 http://mirror.einval.org/debian unstable/main arm64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:71 http://mirror.einval.org/debian unstable/main arm64 libhttp-message-perl all 6.46-1 [79.7 kB] Get:72 http://mirror.einval.org/debian unstable/main arm64 libhtml-form-perl all 6.11-1 [33.1 kB] Get:73 http://mirror.einval.org/debian unstable/main arm64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:74 http://mirror.einval.org/debian unstable/main arm64 libhtml-tree-perl all 5.07-3 [211 kB] Get:75 http://mirror.einval.org/debian unstable/main arm64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:76 http://mirror.einval.org/debian unstable/main arm64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:77 http://mirror.einval.org/debian unstable/main arm64 perl-openssl-defaults arm64 7+b2 [6712 B] Get:78 http://mirror.einval.org/debian unstable/main arm64 libnet-ssleay-perl arm64 1.94-1+b1 [328 kB] Get:79 http://mirror.einval.org/debian unstable/main arm64 libio-socket-ssl-perl all 2.088-1 [222 kB] Get:80 http://mirror.einval.org/debian unstable/main arm64 libnet-http-perl all 6.23-1 [23.9 kB] Get:81 http://mirror.einval.org/debian unstable/main arm64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get:82 http://mirror.einval.org/debian unstable/main arm64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:83 http://mirror.einval.org/debian unstable/main arm64 libwww-perl all 6.77-1 [183 kB] Get:84 http://mirror.einval.org/debian unstable/main arm64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:85 http://mirror.einval.org/debian unstable/main arm64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:86 http://mirror.einval.org/debian unstable/main arm64 libio-interactive-perl all 1.025-1 [11.4 kB] Get:87 http://mirror.einval.org/debian unstable/main arm64 libipc-run3-perl all 0.049-1 [31.5 kB] Get:88 http://mirror.einval.org/debian unstable/main arm64 libjson-maybexs-perl all 1.004005-1 [12.9 kB] Get:89 http://mirror.einval.org/debian unstable/main arm64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:90 http://mirror.einval.org/debian unstable/main arm64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:91 http://mirror.einval.org/debian unstable/main arm64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:92 http://mirror.einval.org/debian unstable/main arm64 liblz1 arm64 1.15~pre1-1 [37.7 kB] Get:93 http://mirror.einval.org/debian unstable/main arm64 liblzo2-2 arm64 2.10-3 [48.9 kB] Get:94 http://mirror.einval.org/debian unstable/main arm64 libmarkdown2 arm64 2.2.7-2+b1 [33.2 kB] Get:95 http://mirror.einval.org/debian unstable/main arm64 libmldbm-perl all 2.05-4 [16.8 kB] Get:96 http://mirror.einval.org/debian unstable/main arm64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:97 http://mirror.einval.org/debian unstable/main arm64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:98 http://mirror.einval.org/debian unstable/main arm64 libmoo-perl all 2.005005-1 [58.0 kB] Get:99 http://mirror.einval.org/debian unstable/main arm64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:100 http://mirror.einval.org/debian unstable/main arm64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:101 http://mirror.einval.org/debian unstable/main arm64 libmouse-perl arm64 2.5.10-1+b5 [141 kB] Get:102 http://mirror.einval.org/debian unstable/main arm64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:103 http://mirror.einval.org/debian unstable/main arm64 libsub-identify-perl arm64 0.14-3+b2 [11.2 kB] Get:104 http://mirror.einval.org/debian unstable/main arm64 libsub-name-perl arm64 0.27-1+b2 [12.3 kB] Get:105 http://mirror.einval.org/debian unstable/main arm64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:106 http://mirror.einval.org/debian unstable/main arm64 libpath-tiny-perl all 0.146-1 [56.2 kB] Get:107 http://mirror.einval.org/debian unstable/main arm64 libperlio-gzip-perl arm64 0.20-1+b3 [17.4 kB] Get:108 http://mirror.einval.org/debian unstable/main arm64 libperlio-utf8-strict-perl arm64 0.010-1+b2 [11.4 kB] Get:109 http://mirror.einval.org/debian unstable/main arm64 libproc-processtable-perl arm64 0.636-1+b2 [41.6 kB] Get:110 http://mirror.einval.org/debian unstable/main arm64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:111 http://mirror.einval.org/debian unstable/main arm64 libsereal-decoder-perl arm64 5.004+ds-1+b2 [95.4 kB] Get:112 http://mirror.einval.org/debian unstable/main arm64 libsereal-encoder-perl arm64 5.004+ds-1+b2 [97.6 kB] Get:113 http://mirror.einval.org/debian unstable/main arm64 libsort-versions-perl all 1.62-3 [8928 B] Get:114 http://mirror.einval.org/debian unstable/main arm64 libxs-parse-keyword-perl arm64 0.44-1 [62.7 kB] Get:115 http://mirror.einval.org/debian unstable/main arm64 libsyntax-keyword-try-perl arm64 0.29-2 [26.6 kB] Get:116 http://mirror.einval.org/debian unstable/main arm64 libterm-readkey-perl arm64 2.38-2+b3 [24.4 kB] Get:117 http://mirror.einval.org/debian unstable/main arm64 libtext-levenshteinxs-perl arm64 0.03-5+b3 [8680 B] Get:118 http://mirror.einval.org/debian unstable/main arm64 libtext-markdown-discount-perl arm64 0.16-1+b2 [13.1 kB] Get:119 http://mirror.einval.org/debian unstable/main arm64 libtext-xslate-perl arm64 3.5.9-2 [171 kB] Get:120 http://mirror.einval.org/debian unstable/main arm64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:121 http://mirror.einval.org/debian unstable/main arm64 libtime-moment-perl arm64 0.44-2+b3 [72.2 kB] Get:122 http://mirror.einval.org/debian unstable/main arm64 libunicode-utf8-perl arm64 0.62-2+b2 [19.9 kB] Get:123 http://mirror.einval.org/debian unstable/main arm64 libwww-mechanize-perl all 2.18-1 [114 kB] Get:124 http://mirror.einval.org/debian unstable/main arm64 libyaml-0-2 arm64 0.2.5-1+b1 [49.0 kB] Get:125 http://mirror.einval.org/debian unstable/main arm64 libyaml-libyaml-perl arm64 0.89+ds-1+b1 [33.2 kB] Get:126 http://mirror.einval.org/debian unstable/main arm64 plzip arm64 1.11-2 [58.9 kB] Get:127 http://mirror.einval.org/debian unstable/main arm64 lzop arm64 1.04-2 [82.8 kB] Get:128 http://mirror.einval.org/debian unstable/main arm64 patchutils arm64 0.4.2-1 [73.5 kB] Get:129 http://mirror.einval.org/debian unstable/main arm64 t1utils arm64 1.41-4 [59.8 kB] Get:130 http://mirror.einval.org/debian unstable/main arm64 unzip arm64 6.0-28 [157 kB] Get:131 http://mirror.einval.org/debian unstable/main arm64 lintian all 2.118.0 [1055 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 12.6 MB in 0s (49.3 MB/s) Selecting previously unselected package netbase. (Reading database ... 17246 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.3.1-2_arm64.deb ... Unpacking openssl (3.3.1-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package diffstat. Preparing to unpack .../004-diffstat_1.66-1_arm64.deb ... Unpacking diffstat (1.66-1) ... Selecting previously unselected package libassuan0:arm64. Preparing to unpack .../005-libassuan0_2.5.6-1+b1_arm64.deb ... Unpacking libassuan0:arm64 (2.5.6-1+b1) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../006-libreadline8t64_8.2-4_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-4) ... Selecting previously unselected package gpgconf. Preparing to unpack .../007-gpgconf_2.2.43-8_arm64.deb ... Unpacking gpgconf (2.2.43-8) ... Selecting previously unselected package libsqlite3-0:arm64. Preparing to unpack .../008-libsqlite3-0_3.46.0-1_arm64.deb ... Unpacking libsqlite3-0:arm64 (3.46.0-1) ... Selecting previously unselected package gpg. Preparing to unpack .../009-gpg_2.2.43-8_arm64.deb ... Unpacking gpg (2.2.43-8) ... Selecting previously unselected package iso-codes. Preparing to unpack .../010-iso-codes_4.16.0-1_all.deb ... Unpacking iso-codes (4.16.0-1) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../011-libaliased-perl_0.34-3_all.deb ... Unpacking libaliased-perl (0.34-3) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../012-libapt-pkg-perl_0.1.40+b5_arm64.deb ... Unpacking libapt-pkg-perl (0.1.40+b5) ... Selecting previously unselected package libb-hooks-op-check-perl:arm64. Preparing to unpack .../013-libb-hooks-op-check-perl_0.22-3+b1_arm64.deb ... Unpacking libb-hooks-op-check-perl:arm64 (0.22-3+b1) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../014-libdynaloader-functions-perl_0.004-1_all.deb ... Unpacking libdynaloader-functions-perl (0.004-1) ... Selecting previously unselected package libdevel-callchecker-perl:arm64. Preparing to unpack .../015-libdevel-callchecker-perl_0.009-1_arm64.deb ... Unpacking libdevel-callchecker-perl:arm64 (0.009-1) ... Selecting previously unselected package libparams-classify-perl:arm64. Preparing to unpack .../016-libparams-classify-perl_0.015-2+b3_arm64.deb ... Unpacking libparams-classify-perl:arm64 (0.015-2+b3) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../017-libmodule-runtime-perl_0.016-2_all.deb ... Unpacking libmodule-runtime-perl (0.016-2) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../018-libtry-tiny-perl_0.31-2_all.deb ... Unpacking libtry-tiny-perl (0.31-2) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../019-libmodule-implementation-perl_0.09-2_all.deb ... Unpacking libmodule-implementation-perl (0.09-2) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../020-libsub-exporter-progressive-perl_0.001013-3_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-3) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../021-libvariable-magic-perl_0.64-1_arm64.deb ... Unpacking libvariable-magic-perl (0.64-1) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../022-libb-hooks-endofscope-perl_0.28-1_all.deb ... Unpacking libb-hooks-endofscope-perl (0.28-1) ... Selecting previously unselected package libberkeleydb-perl:arm64. Preparing to unpack .../023-libberkeleydb-perl_0.64-2+b3_arm64.deb ... Unpacking libberkeleydb-perl:arm64 (0.64-2+b3) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../024-libcapture-tiny-perl_0.48-2_all.deb ... Unpacking libcapture-tiny-perl (0.48-2) ... Selecting previously unselected package libhtml-tagset-perl. Preparing to unpack .../025-libhtml-tagset-perl_3.24-1_all.deb ... Unpacking libhtml-tagset-perl (3.24-1) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../026-liburi-perl_5.28-1_all.deb ... Unpacking liburi-perl (5.28-1) ... Selecting previously unselected package libhtml-parser-perl:arm64. Preparing to unpack .../027-libhtml-parser-perl_3.83-1_arm64.deb ... Unpacking libhtml-parser-perl:arm64 (3.83-1) ... Selecting previously unselected package libcgi-pm-perl. Preparing to unpack .../028-libcgi-pm-perl_4.66-1_all.deb ... Unpacking libcgi-pm-perl (4.66-1) ... Selecting previously unselected package libclass-data-inheritable-perl. Preparing to unpack .../029-libclass-data-inheritable-perl_0.08-3_all.deb ... Unpacking libclass-data-inheritable-perl (0.08-3) ... Selecting previously unselected package libclass-inspector-perl. 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Unpacking libparams-util-perl (1.102-3) ... Selecting previously unselected package libsub-install-perl. Preparing to unpack .../036-libsub-install-perl_0.929-1_all.deb ... Unpacking libsub-install-perl (0.929-1) ... Selecting previously unselected package libdata-optlist-perl. Preparing to unpack .../037-libdata-optlist-perl_0.114-1_all.deb ... Unpacking libdata-optlist-perl (0.114-1) ... Selecting previously unselected package libsub-exporter-perl. Preparing to unpack .../038-libsub-exporter-perl_0.990-1_all.deb ... Unpacking libsub-exporter-perl (0.990-1) ... Selecting previously unselected package libconst-fast-perl. Preparing to unpack .../039-libconst-fast-perl_0.014-2_all.deb ... Unpacking libconst-fast-perl (0.014-2) ... Selecting previously unselected package libcpanel-json-xs-perl:arm64. Preparing to unpack .../040-libcpanel-json-xs-perl_4.38-1_arm64.deb ... Unpacking libcpanel-json-xs-perl:arm64 (4.38-1) ... Selecting previously unselected package libdevel-stacktrace-perl. 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Setting up libclass-inspector-perl (1.36-3) ... Setting up libdynaloader-functions-perl (0.004-1) ... Setting up libtext-glob-perl (0.11-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:arm64 (0.46-1+b2) ... Setting up libyaml-0-2:arm64 (0.2.5-1+b1) ... Setting up libsub-identify-perl (0.14-3+b2) ... Setting up libcpanel-json-xs-perl:arm64 (4.38-1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdevel-size-perl (0.84-1) ... Setting up unzip (6.0-28) ... Setting up libsqlite3-0:arm64 (3.46.0-1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.89+ds-1+b1) ... Setting up libio-interactive-perl (1.025-1) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up perl-openssl-defaults:arm64 (7+b2) ... Setting up libmldbm-perl (2.05-4) ... Setting up liblzo2-2:arm64 (2.10-3) ... Setting up libtime-moment-perl (0.44-2+b3) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libassuan0:arm64 (2.5.6-1+b1) ... Setting up libconfig-tiny-perl (2.30-1) ... Setting up libsereal-encoder-perl (5.004+ds-1+b2) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up libnet-netmask-perl (2.0002-2) ... Setting up libsub-install-perl (0.929-1) ... Setting up libnumber-compare-perl (0.03-3) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004005-1) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2+b3) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libfile-find-rule-perl (0.34-3) ... Setting up libipc-system-simple-perl (1.30-2) ... Setting up libnet-domain-tld-perl (1.75-3) ... Setting up libperlio-utf8-strict-perl (0.010-1+b2) ... Setting up t1utils (1.41-4) ... Setting up diffstat (1.66-1) ... Setting up libvariable-magic-perl (0.64-1) ... Setting up libio-html-perl (1.004-3) ... Setting up libb-hooks-op-check-perl:arm64 (0.22-3+b1) ... Setting up libparams-util-perl (1.102-3) ... Setting up libtime-duration-perl (1.21-2) ... Setting up libtext-xslate-perl:arm64 (3.5.9-2) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up libcapture-tiny-perl (0.48-2) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libsub-name-perl:arm64 (0.27-1+b2) ... Setting up libdata-validate-domain-perl (0.10-1.1) ... Setting up libproc-processtable-perl:arm64 (0.636-1+b2) ... Setting up libpath-tiny-perl (0.146-1) ... Setting up lzop (1.04-2) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libipc-run3-perl (0.049-1) ... Setting up libregexp-wildcards-perl (1.05-3) ... Setting up libfile-sharedir-perl (1.118-3) ... Setting up libaliased-perl (0.34-3) ... Setting up netbase (6.4) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006008-1) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libclass-xsaccessor-perl (1.19-4+b3) ... Setting up libsort-versions-perl (1.62-3) ... Setting up libterm-readkey-perl (2.38-2+b3) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.3.1-2) ... Setting up libtext-levenshteinxs-perl (0.03-5+b3) ... Setting up libperlio-gzip-perl (0.20-1+b3) ... Setting up readline-common (8.2-4) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.004+ds-1+b2) ... Setting up libmarkdown2:arm64 (2.2.7-2+b1) ... Setting up liburi-perl (5.28-1) ... Setting up iso-codes (4.16.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b3) ... Setting up libnet-ssleay-perl:arm64 (1.94-1+b1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libtext-markdown-discount-perl (0.16-1+b2) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:arm64 (0.009-1) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-3) ... Setting up libxs-parse-keyword-perl (0.44-1) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up libreadline8t64:arm64 (8.2-4) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libsyntax-keyword-try-perl (0.29-2) ... Setting up libhtml-parser-perl:arm64 (3.83-1) ... Setting up gpgconf (2.2.43-8) ... Setting up libio-socket-ssl-perl (2.088-1) ... Setting up gpg (2.2.43-8) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (6.46-1) ... Setting up libhtml-form-perl (6.11-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:arm64 (0.015-2+b3) ... Setting up libcgi-pm-perl (4.66-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.59-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.28-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.77-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.18-1) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up lintian (2.118.0) ... Setting up sbuild-build-depends-lintian-dummy:amd64 (0.invalid.0) ... Processing triggers for libc-bin (2.39-6) ... Processing triggers for man-db (2.12.1-3) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Build-Space: 72648 Build-Time: 489 Distribution: unstable Foreign Architectures: amd64 Host Architecture: amd64 Install-Time: 49 Job: libmuscle_3.7+4565-8 Lintian: pass Machine Architecture: arm64 Package: libmuscle Package-Time: 590 Source-Version: 3.7+4565-8 Space: 72648 Status: successful Version: 3.7+4565-8 -------------------------------------------------------------------------------- Finished at 2024-08-10T22:39:48Z Build needed 00:09:50, 72648k disk space