sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | libpdb-redo 3.0.5-2 (armhf) Tue, 26 Sep 2023 00:59:10 +0000 | +==============================================================================+ Package: libpdb-redo Version: 3.0.5-2 Source Version: 3.0.5-2 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-33e30ece-e121-49a0-b208-c6f7ae8b449b' with '<>' I: NOTICE: Log filtering will replace 'build/libpdb-redo-fJ2YqZ/resolver-TJ5elg' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://localhost:3142/debian sid InRelease Get:2 http://localhost:3142/debian sid/main armhf Packages [9076 kB] Fetched 9076 kB in 1s (7690 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'libpdb-redo' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libpdb-redo.git Please use: git clone https://salsa.debian.org/med-team/libpdb-redo.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 870 kB of source archives. Get:1 http://localhost:3142/debian sid/main libpdb-redo 3.0.5-2 (dsc) [2288 B] Get:2 http://localhost:3142/debian sid/main libpdb-redo 3.0.5-2 (tar) [864 kB] Get:3 http://localhost:3142/debian sid/main libpdb-redo 3.0.5-2 (diff) [4160 B] Fetched 870 kB in 1s (787 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/libpdb-redo-fJ2YqZ/libpdb-redo-3.0.5' with '<>' I: NOTICE: Log filtering will replace 'build/libpdb-redo-fJ2YqZ' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), libcifpp-dev (>= 5.0.7), cmake, libnewuoa-dev (>= 0.1.2), pkg-config, libgsl-dev, libboost-dev, libboost-regex-dev, libclipper-dev, zlib1g-dev, libccp4-dev (>= 6.5.1-5), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf Filtered Build-Depends: debhelper-compat (= 13), libcifpp-dev (>= 5.0.7), cmake, libnewuoa-dev (>= 0.1.2), pkg-config, libgsl-dev, libboost-dev, libboost-regex-dev, libclipper-dev, zlib1g-dev, libccp4-dev (>= 6.5.1-5), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [884 B] Get:5 copy:/<>/apt_archive ./ Packages [927 B] Fetched 2420 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils cmake cmake-data cpp-13-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fftw-dev:armhf fftw2:armhf file g++-13-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-13-arm-linux-gnueabihf gcc-13-arm-linux-gnueabihf-base gcc-13-base:armhf gcc-13-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libarchive13 libasan8:armhf libasan8-armhf-cross libatomic1:armhf libatomic1-armhf-cross libboost-dev:armhf libboost-regex-dev:armhf libboost-regex1.74-dev:armhf libboost-regex1.74.0:armhf libboost1.74-dev:armhf libbrotli1 libbsd0:armhf libc6:armhf libc6-armhf-cross libc6-dev:armhf libc6-dev-armhf-cross libcap2:armhf libccp4-data libccp4-dev:armhf libccp4c0:armhf libccp4f0:armhf libcifpp-data libcifpp-dev:armhf libcifpp5:armhf libclipper-dev:armhf libclipper2:armhf libcom-err2:armhf libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:armhf libcrypt1:armhf libcurl4 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libevent-core-2.1-7:armhf libevent-pthreads-2.1-7:armhf libexpat1 libfabric1:armhf libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-13-dev:armhf libgcc-13-dev-armhf-cross libgcc-s1:armhf libgcc-s1-armhf-cross libgfortran5:armhf libgomp1:armhf libgomp1-armhf-cross libgsl-dev:armhf libgsl27:armhf libgslcblas0:armhf libgssapi-krb5-2:armhf libhwloc-plugins:armhf libhwloc15:armhf libibverbs1:armhf libicu-dev:armhf libicu72 libicu72:armhf libio-string-perl libjsoncpp25 libk5crypto3:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5support0:armhf libldap-2.5-0 liblocale-gettext-perl liblzma5:armhf libmagic-mgc libmagic1 libmd0:armhf libmmdb2-0:armhf libmmdb2-dev:armhf libmunge2:armhf libncursesw6 libnewuoa-dev:armhf libnewuoa0:armhf libnghttp2-14 libnl-3-200:armhf libnl-route-3-200:armhf libnsl-dev:armhf libnsl2:armhf libopenmpi3:armhf libpciaccess0:armhf libpipeline1 libpkgconf3 libpmix2:armhf libproc2-0 libpsl5 librdmacm1:armhf librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libssh2-1 libssl3:armhf libstdc++-13-dev:armhf libstdc++-13-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtirpc-dev:armhf libtirpc3:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libudev1:armhf libuv1 libx11-6:armhf libx11-data libxau6:armhf libxcb1:armhf libxdmcp6:armhf libxext6:armhf libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxml2:armhf libxnvctrl0:armhf libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db ocl-icd-libopencl1:armhf pkg-config:armhf pkgconf:armhf pkgconf-bin po-debconf procps sensible-utils sfftw-dev:armhf sfftw2:armhf ucf zlib1g:armhf zlib1g-dev:armhf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc cmake-doc cmake-format elpa-cmake-mode ninja-build gcc-13-locales cpp-13-doc cpp-doc dh-make binutils-multiarch mpi-defaults-bin:armhf gcc-13-doc manpages-dev flex bison gdb-arm-linux-gnueabihf gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libboost-doc:armhf libboost1.74-doc:armhf libboost-atomic1.74-dev:armhf libboost-chrono1.74-dev:armhf libboost-container1.74-dev:armhf libboost-context1.74-dev:armhf libboost-contract1.74-dev:armhf libboost-coroutine1.74-dev:armhf libboost-date-time1.74-dev:armhf libboost-exception1.74-dev:armhf libboost-fiber1.74-dev:armhf libboost-filesystem1.74-dev:armhf libboost-graph1.74-dev:armhf libboost-graph-parallel1.74-dev:armhf libboost-iostreams1.74-dev:armhf libboost-locale1.74-dev:armhf libboost-log1.74-dev:armhf libboost-math1.74-dev:armhf libboost-mpi1.74-dev:armhf libboost-mpi-python1.74-dev:armhf libboost-numpy1.74-dev:armhf libboost-program-options1.74-dev:armhf libboost-python1.74-dev:armhf libboost-random1.74-dev:armhf libboost-serialization1.74-dev:armhf libboost-stacktrace1.74-dev:armhf libboost-system1.74-dev:armhf libboost-test1.74-dev:armhf libboost-thread1.74-dev:armhf libboost-timer1.74-dev:armhf libboost-type-erasure1.74-dev:armhf libboost-wave1.74-dev:armhf libboost1.74-tools-dev:armhf libmpfrc++-dev:armhf libntl-dev:armhf libboost-nowide1.74-dev:armhf glibc-doc:armhf libc-l10n:armhf locales:armhf libnss-nis:armhf libnss-nisplus:armhf manpages-dev:armhf libclipper-doc:armhf gsl-ref-psdoc:armhf | gsl-doc-pdf:armhf | gsl-doc-info:armhf | gsl-ref-html:armhf krb5-doc:armhf krb5-user:armhf icu-doc:armhf pciutils:armhf libstdc++-13-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser opencl-icd:armhf libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:armhf ca-certificates libarchive-cpio-perl ibverbs-providers:armhf krb5-locales:armhf libldap-common libgpm2 publicsuffix libsasl2-modules libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils cmake cmake-data cpp-13-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fftw-dev:armhf fftw2:armhf file g++-13-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-13-arm-linux-gnueabihf gcc-13-arm-linux-gnueabihf-base gcc-13-base:armhf gcc-13-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libarchive13 libasan8:armhf libasan8-armhf-cross libatomic1:armhf libatomic1-armhf-cross libboost-dev:armhf libboost-regex-dev:armhf libboost-regex1.74-dev:armhf libboost-regex1.74.0:armhf libboost1.74-dev:armhf libbrotli1 libbsd0:armhf libc6:armhf libc6-armhf-cross libc6-dev:armhf libc6-dev-armhf-cross libcap2:armhf libccp4-data libccp4-dev:armhf libccp4c0:armhf libccp4f0:armhf libcifpp-data libcifpp-dev:armhf libcifpp5:armhf libclipper-dev:armhf libclipper2:armhf libcom-err2:armhf libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:armhf libcrypt1:armhf libcurl4 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libevent-core-2.1-7:armhf libevent-pthreads-2.1-7:armhf libexpat1 libfabric1:armhf libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-13-dev:armhf libgcc-13-dev-armhf-cross libgcc-s1:armhf libgcc-s1-armhf-cross libgfortran5:armhf libgomp1:armhf libgomp1-armhf-cross libgsl-dev:armhf libgsl27:armhf libgslcblas0:armhf libgssapi-krb5-2:armhf libhwloc-plugins:armhf libhwloc15:armhf libibverbs1:armhf libicu-dev:armhf libicu72 libicu72:armhf libio-string-perl libjsoncpp25 libk5crypto3:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5support0:armhf libldap-2.5-0 liblocale-gettext-perl liblzma5:armhf libmagic-mgc libmagic1 libmd0:armhf libmmdb2-0:armhf libmmdb2-dev:armhf libmunge2:armhf libncursesw6 libnewuoa-dev:armhf libnewuoa0:armhf libnghttp2-14 libnl-3-200:armhf libnl-route-3-200:armhf libnsl-dev:armhf libnsl2:armhf libopenmpi3:armhf libpciaccess0:armhf libpipeline1 libpkgconf3 libpmix2:armhf libproc2-0 libpsl5 librdmacm1:armhf librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libssh2-1 libssl3:armhf libstdc++-13-dev:armhf libstdc++-13-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtirpc-dev:armhf libtirpc3:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libudev1:armhf libuv1 libx11-6:armhf libx11-data libxau6:armhf libxcb1:armhf libxdmcp6:armhf libxext6:armhf libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxml2:armhf libxnvctrl0:armhf libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db ocl-icd-libopencl1:armhf pkg-config:armhf pkgconf:armhf pkgconf-bin po-debconf procps sbuild-build-depends-main-dummy:armhf sensible-utils sfftw-dev:armhf sfftw2:armhf ucf zlib1g:armhf zlib1g-dev:armhf 0 upgraded, 174 newly installed, 0 to remove and 0 not upgraded. Need to get 146 MB of archives. After this operation, 663 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [996 B] Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-6 [15.3 kB] Get:3 http://localhost:3142/debian sid/main amd64 libncursesw6 amd64 6.4+20230625-2 [134 kB] Get:4 http://localhost:3142/debian sid/main amd64 libproc2-0 amd64 2:4.0.3-1 [63.2 kB] Get:5 http://localhost:3142/debian sid/main amd64 procps amd64 2:4.0.3-1 [762 kB] Get:6 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.20 [19.3 kB] Get:7 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.45-2 [314 kB] Get:8 http://localhost:3142/debian sid/main amd64 libmagic1 amd64 1:5.45-2 [105 kB] Get:9 http://localhost:3142/debian sid/main amd64 file amd64 1:5.45-2 [42.8 kB] Get:10 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-13+b1 [161 kB] Get:11 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:12 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.23.0-2 [1176 kB] Get:13 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.39.2-1 [88.7 kB] Get:14 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get:15 http://localhost:3142/debian sid/main amd64 man-db amd64 2.12.0-1 [1402 kB] Get:16 http://localhost:3142/debian sid/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:17 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-4 [287 kB] Get:18 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-3 [332 kB] Get:19 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:20 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:21 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-13 [496 kB] Get:22 http://localhost:3142/debian sid/main amd64 binutils-arm-linux-gnueabihf amd64 2.41-5 [3243 kB] Get:23 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get:24 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1.3 [686 kB] Get:25 http://localhost:3142/debian sid/main amd64 libarchive13 amd64 3.6.2-1 [343 kB] Get:26 http://localhost:3142/debian sid/main amd64 libbrotli1 amd64 1.0.9-2+b6 [275 kB] Get:27 http://localhost:3142/debian sid/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-3 [19.3 kB] Get:28 http://localhost:3142/debian sid/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-3 [56.6 kB] Get:29 http://localhost:3142/debian sid/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5 [183 kB] Get:30 http://localhost:3142/debian sid/main amd64 libnghttp2-14 amd64 1.56.0-1 [73.1 kB] Get:31 http://localhost:3142/debian sid/main amd64 libpsl5 amd64 0.21.2-1+b1 [59.1 kB] Get:32 http://localhost:3142/debian sid/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:33 http://localhost:3142/debian sid/main amd64 libssh2-1 amd64 1.11.0-2 [214 kB] Get:34 http://localhost:3142/debian sid/main amd64 libcurl4 amd64 8.3.0-1 [406 kB] Get:35 http://localhost:3142/debian sid/main amd64 libexpat1 amd64 2.5.0-2 [99.0 kB] Get:36 http://localhost:3142/debian sid/main amd64 libjsoncpp25 amd64 1.9.5-6 [79.8 kB] Get:37 http://localhost:3142/debian sid/main amd64 librhash0 amd64 1.4.3-3 [134 kB] Get:38 http://localhost:3142/debian sid/main amd64 libuv1 amd64 1.44.2-1 [140 kB] Get:39 http://localhost:3142/debian sid/main amd64 cmake-data all 3.27.6-1 [2103 kB] Get:40 http://localhost:3142/debian sid/main amd64 cmake amd64 3.27.6-1 [10.4 MB] Get:41 http://localhost:3142/debian sid/main amd64 gcc-13-arm-linux-gnueabihf-base amd64 13.2.0-2cross1 [39.6 kB] Get:42 http://localhost:3142/debian sid/main amd64 cpp-13-arm-linux-gnueabihf amd64 13.2.0-2cross1 [9272 kB] Get:43 http://localhost:3142/debian sid/main amd64 cpp-arm-linux-gnueabihf amd64 4:13.2.0-1 [4124 B] Get:44 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.20 [16.3 kB] Get:45 http://localhost:3142/debian sid/main amd64 gcc-13-cross-base all 13.2.0-2cross1 [35.2 kB] Get:46 http://localhost:3142/debian sid/main amd64 libc6-armhf-cross all 2.37-3cross1 [868 kB] Get:47 http://localhost:3142/debian sid/main amd64 libgcc-s1-armhf-cross all 13.2.0-2cross1 [36.4 kB] Get:48 http://localhost:3142/debian sid/main amd64 libgomp1-armhf-cross all 13.2.0-2cross1 [103 kB] Get:49 http://localhost:3142/debian sid/main amd64 libatomic1-armhf-cross all 13.2.0-2cross1 [6752 B] Get:50 http://localhost:3142/debian sid/main amd64 libasan8-armhf-cross all 13.2.0-2cross1 [2410 kB] Get:51 http://localhost:3142/debian sid/main amd64 libstdc++6-armhf-cross all 13.2.0-2cross1 [545 kB] Get:52 http://localhost:3142/debian sid/main amd64 libubsan1-armhf-cross all 13.2.0-2cross1 [967 kB] Get:53 http://localhost:3142/debian sid/main amd64 libgcc-13-dev-armhf-cross all 13.2.0-2cross1 [783 kB] Get:54 http://localhost:3142/debian sid/main amd64 gcc-13-arm-linux-gnueabihf amd64 13.2.0-2cross1 [18.2 MB] Get:55 http://localhost:3142/debian sid/main amd64 gcc-arm-linux-gnueabihf amd64 4:13.2.0-1 [1476 B] Get:56 http://localhost:3142/debian sid/main amd64 linux-libc-dev-armhf-cross all 6.3.7-1cross1 [1878 kB] Get:57 http://localhost:3142/debian sid/main amd64 libc6-dev-armhf-cross all 2.37-3cross1 [1264 kB] Get:58 http://localhost:3142/debian sid/main amd64 libstdc++-13-dev-armhf-cross all 13.2.0-2cross1 [2207 kB] Get:59 http://localhost:3142/debian sid/main amd64 g++-13-arm-linux-gnueabihf amd64 13.2.0-2cross1 [10.2 MB] Get:60 http://localhost:3142/debian sid/main amd64 g++-arm-linux-gnueabihf amd64 4:13.2.0-1 [1180 B] Get:61 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:62 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:63 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:64 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:65 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:66 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b1 [322 kB] Get:67 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:68 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.30-2 [63.4 kB] Get:69 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:70 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:71 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:72 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:73 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.20 [25.8 kB] Get:74 http://localhost:3142/debian sid/main amd64 crossbuild-essential-armhf all 12.10 [3484 B] Get:75 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.11.6 [81.9 kB] Get:76 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-7 [517 kB] Get:77 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:78 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:79 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get:80 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:81 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:82 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.189-4 [174 kB] Get:83 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1 [109 kB] Get:84 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-13+b1 [1301 kB] Get:85 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:86 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:87 http://localhost:3142/debian sid/main amd64 debhelper all 13.11.6 [952 kB] Get:88 http://localhost:3142/debian sid/main armhf gcc-13-base armhf 13.2.0-4 [39.8 kB] Get:89 http://localhost:3142/debian sid/main armhf libgcc-s1 armhf 13.2.0-4 [36.5 kB] Get:90 http://localhost:3142/debian sid/main armhf libc6 armhf 2.37-10 [2135 kB] Get:91 http://localhost:3142/debian sid/main armhf libevent-core-2.1-7 armhf 2.1.12-stable-8 [120 kB] Get:92 http://localhost:3142/debian sid/main armhf libevent-pthreads-2.1-7 armhf 2.1.12-stable-8 [53.2 kB] Get:93 http://localhost:3142/debian sid/main armhf libnl-3-200 armhf 3.7.0-0.2+b1 [55.8 kB] Get:94 http://localhost:3142/debian sid/main armhf libnl-route-3-200 armhf 3.7.0-0.2+b1 [156 kB] Get:95 http://localhost:3142/debian sid/main armhf libibverbs1 armhf 47.0-1 [53.5 kB] Get:96 http://localhost:3142/debian sid/main armhf librdmacm1 armhf 47.0-1 [61.1 kB] Get:97 http://localhost:3142/debian sid/main armhf libfabric1 armhf 1.17.0-3 [385 kB] Get:98 http://localhost:3142/debian sid/main armhf libcap2 armhf 1:2.66-4 [23.0 kB] Get:99 http://localhost:3142/debian sid/main armhf libudev1 armhf 254.4-1 [111 kB] Get:100 http://localhost:3142/debian sid/main armhf libhwloc15 armhf 2.9.3-1 [127 kB] Get:101 http://localhost:3142/debian sid/main armhf libmunge2 armhf 0.5.15-2 [15.7 kB] Get:102 http://localhost:3142/debian sid/main armhf zlib1g armhf 1:1.2.13.dfsg-3 [73.8 kB] Get:103 http://localhost:3142/debian sid/main armhf libpciaccess0 armhf 0.17-2 [48.7 kB] Get:104 http://localhost:3142/debian sid/main armhf libxau6 armhf 1:1.0.9-1 [19.0 kB] Get:105 http://localhost:3142/debian sid/main armhf libmd0 armhf 1.1.0-1 [31.5 kB] Get:106 http://localhost:3142/debian sid/main armhf libbsd0 armhf 0.11.7-4 [111 kB] Get:107 http://localhost:3142/debian sid/main armhf libxdmcp6 armhf 1:1.1.2-3 [24.9 kB] Get:108 http://localhost:3142/debian sid/main armhf libxcb1 armhf 1.15-1 [140 kB] Get:109 http://localhost:3142/debian sid/main amd64 libx11-data all 2:1.8.6-1 [323 kB] Get:110 http://localhost:3142/debian sid/main armhf libx11-6 armhf 2:1.8.6-1 [732 kB] Get:111 http://localhost:3142/debian sid/main armhf libstdc++6 armhf 13.2.0-4 [592 kB] Get:112 http://localhost:3142/debian sid/main armhf libicu72 armhf 72.1-3 [9048 kB] Get:113 http://localhost:3142/debian sid/main armhf liblzma5 armhf 5.4.4-0.1 [216 kB] Get:114 http://localhost:3142/debian sid/main armhf libxml2 armhf 2.9.14+dfsg-1.3 [591 kB] Get:115 http://localhost:3142/debian sid/main armhf libxext6 armhf 2:1.3.4-1+b1 [47.8 kB] Get:116 http://localhost:3142/debian sid/main armhf libxnvctrl0 armhf 525.125.06-1 [12.4 kB] Get:117 http://localhost:3142/debian sid/main armhf ocl-icd-libopencl1 armhf 2.3.2-1 [36.8 kB] Get:118 http://localhost:3142/debian sid/main armhf libhwloc-plugins armhf 2.9.3-1 [15.6 kB] Get:119 http://localhost:3142/debian sid/main armhf libpmix2 armhf 5.0.1-2 [542 kB] Get:120 http://localhost:3142/debian sid/main armhf libopenmpi3 armhf 4.1.5-3 [1847 kB] Get:121 http://localhost:3142/debian sid/main armhf fftw2 armhf 2.1.5-6 [190 kB] Get:122 http://localhost:3142/debian sid/main armhf fftw-dev armhf 2.1.5-6 [217 kB] Get:123 http://localhost:3142/debian sid/main amd64 icu-devtools amd64 72.1-3 [206 kB] Get:124 http://localhost:3142/debian sid/main armhf libasan8 armhf 13.2.0-4 [2416 kB] Get:125 http://localhost:3142/debian sid/main armhf libatomic1 armhf 13.2.0-4 [7004 B] Get:126 http://localhost:3142/debian sid/main armhf libgomp1 armhf 13.2.0-4 [105 kB] Get:127 http://localhost:3142/debian sid/main armhf libubsan1 armhf 13.2.0-4 [968 kB] Get:128 http://localhost:3142/debian sid/main armhf libgcc-13-dev armhf 13.2.0-4 [782 kB] Get:129 http://localhost:3142/debian sid/main armhf linux-libc-dev armhf 6.5.3-1 [1946 kB] Get:130 http://localhost:3142/debian sid/main armhf libcrypt1 armhf 1:4.4.36-2 [95.7 kB] Get:131 http://localhost:3142/debian sid/main armhf libcrypt-dev armhf 1:4.4.36-2 [125 kB] Get:132 http://localhost:3142/debian sid/main armhf libkrb5support0 armhf 1.20.1-4 [29.9 kB] Get:133 http://localhost:3142/debian sid/main armhf libcom-err2 armhf 1.47.0-2+b1 [19.3 kB] Get:134 http://localhost:3142/debian sid/main armhf libk5crypto3 armhf 1.20.1-4 [74.7 kB] Get:135 http://localhost:3142/debian sid/main armhf libkeyutils1 armhf 1.6.3-2 [7832 B] Get:136 http://localhost:3142/debian sid/main armhf libssl3 armhf 3.0.11-1 [1665 kB] Get:137 http://localhost:3142/debian sid/main armhf libkrb5-3 armhf 1.20.1-4 [287 kB] Get:138 http://localhost:3142/debian sid/main armhf libgssapi-krb5-2 armhf 1.20.1-4 [111 kB] Get:139 http://localhost:3142/debian sid/main armhf libtirpc3 armhf 1.3.3+ds-1 [72.9 kB] Get:140 http://localhost:3142/debian sid/main armhf libnsl2 armhf 1.3.0-2 [33.9 kB] Get:141 http://localhost:3142/debian sid/main armhf libtirpc-dev armhf 1.3.3+ds-1 [182 kB] Get:142 http://localhost:3142/debian sid/main armhf libnsl-dev armhf 1.3.0-2 [62.1 kB] Get:143 http://localhost:3142/debian sid/main armhf libc6-dev armhf 2.37-10 [1267 kB] Get:144 http://localhost:3142/debian sid/main armhf libstdc++-13-dev armhf 13.2.0-4 [2258 kB] Get:145 http://localhost:3142/debian sid/main armhf libboost1.74-dev armhf 1.74.0+ds1-22 [9511 kB] Get:146 http://localhost:3142/debian sid/main armhf libboost-dev armhf 1.74.0.3 [4548 B] Get:147 http://localhost:3142/debian sid/main armhf libboost-regex1.74.0 armhf 1.74.0+ds1-22 [439 kB] Get:148 http://localhost:3142/debian sid/main armhf libicu-dev armhf 72.1-3 [10.1 MB] Get:149 http://localhost:3142/debian sid/main armhf libboost-regex1.74-dev armhf 1.74.0+ds1-22 [554 kB] Get:150 http://localhost:3142/debian sid/main armhf libboost-regex-dev armhf 1.74.0.3 [4596 B] Get:151 http://localhost:3142/debian sid/main amd64 libccp4-data all 8.0.0-2 [62.3 kB] Get:152 http://localhost:3142/debian sid/main armhf libccp4c0 armhf 8.0.0-2 [75.2 kB] Get:153 http://localhost:3142/debian sid/main armhf libgfortran5 armhf 13.2.0-4 [254 kB] Get:154 http://localhost:3142/debian sid/main armhf libmmdb2-0 armhf 2.0.22-1 [277 kB] Get:155 http://localhost:3142/debian sid/main armhf libccp4f0 armhf 8.0.0-2 [194 kB] Get:156 http://localhost:3142/debian sid/main armhf libccp4-dev armhf 8.0.0-2 [42.8 kB] Get:157 http://localhost:3142/debian sid/main amd64 libcifpp-data all 5.0.7.1-3 [452 kB] Get:158 http://localhost:3142/debian sid/main armhf libcifpp5 armhf 5.0.7.1-3 [678 kB] Get:159 http://localhost:3142/debian sid/main armhf zlib1g-dev armhf 1:1.2.13.dfsg-3 [902 kB] Get:160 http://localhost:3142/debian sid/main armhf libcifpp-dev armhf 5.0.7.1-3 [86.2 kB] Get:161 http://localhost:3142/debian sid/main armhf sfftw2 armhf 2.1.5-6 [192 kB] Get:162 http://localhost:3142/debian sid/main armhf libclipper2 armhf 2.1.20201109-2 [1073 kB] Get:163 http://localhost:3142/debian sid/main armhf libmmdb2-dev armhf 2.0.22-1 [92.9 kB] Get:164 http://localhost:3142/debian sid/main armhf sfftw-dev armhf 2.1.5-6 [220 kB] Get:165 http://localhost:3142/debian sid/main armhf libclipper-dev armhf 2.1.20201109-2 [82.1 kB] Get:166 http://localhost:3142/debian sid/main armhf libgslcblas0 armhf 2.7.1+dfsg-5 [80.1 kB] Get:167 http://localhost:3142/debian sid/main armhf libgsl27 armhf 2.7.1+dfsg-5 [766 kB] Get:168 http://localhost:3142/debian sid/main armhf libgsl-dev armhf 2.7.1+dfsg-5 [976 kB] Get:169 http://localhost:3142/debian sid/main armhf libnewuoa0 armhf 0.1.2-1 [15.4 kB] Get:170 http://localhost:3142/debian sid/main armhf libnewuoa-dev armhf 0.1.2-1 [7504 B] Get:171 http://localhost:3142/debian sid/main amd64 libpkgconf3 amd64 1.8.1-1 [36.1 kB] Get:172 http://localhost:3142/debian sid/main amd64 pkgconf-bin amd64 1.8.1-1 [29.5 kB] Get:173 http://localhost:3142/debian sid/main armhf pkgconf armhf 1.8.1-1 [25.9 kB] Get:174 http://localhost:3142/debian sid/main armhf pkg-config armhf 1.8.1-1 [13.7 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 146 MB in 1s (103 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 14612 files and directories currently installed.) Preparing to unpack .../000-liblocale-gettext-perl_1.07-6_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-6) ... Selecting previously unselected package libncursesw6:amd64. Preparing to unpack .../001-libncursesw6_6.4+20230625-2_amd64.deb ... Unpacking libncursesw6:amd64 (6.4+20230625-2) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../002-libproc2-0_2%3a4.0.3-1_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.3-1) ... Selecting previously unselected package procps. Preparing to unpack .../003-procps_2%3a4.0.3-1_amd64.deb ... Unpacking procps (2:4.0.3-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../004-sensible-utils_0.0.20_all.deb ... Unpacking sensible-utils (0.0.20) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../005-libmagic-mgc_1%3a5.45-2_amd64.deb ... Unpacking libmagic-mgc (1:5.45-2) ... 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Preparing to unpack .../012-libpipeline1_1.5.7-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../013-man-db_2.12.0-1_amd64.deb ... Unpacking man-db (2.12.0-1) ... Selecting previously unselected package ucf. Preparing to unpack .../014-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package m4. Preparing to unpack .../015-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../016-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../017-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../018-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../019-autopoint_0.21-13_all.deb ... Unpacking autopoint (0.21-13) ... Selecting previously unselected package binutils-arm-linux-gnueabihf. Preparing to unpack .../020-binutils-arm-linux-gnueabihf_2.41-5_amd64.deb ... Unpacking binutils-arm-linux-gnueabihf (2.41-5) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../021-libicu72_72.1-3_amd64.deb ... Unpacking libicu72:amd64 (72.1-3) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../022-libxml2_2.9.14+dfsg-1.3_amd64.deb ... Unpacking libxml2:amd64 (2.9.14+dfsg-1.3) ... Selecting previously unselected package libarchive13:amd64. Preparing to unpack .../023-libarchive13_3.6.2-1_amd64.deb ... Unpacking libarchive13:amd64 (3.6.2-1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../024-libbrotli1_1.0.9-2+b6_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.9-2+b6) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../025-libsasl2-modules-db_2.1.28+dfsg1-3_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-3) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../026-libsasl2-2_2.1.28+dfsg1-3_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-3) ... Selecting previously unselected package libldap-2.5-0:amd64. Preparing to unpack .../027-libldap-2.5-0_2.5.13+dfsg-5_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.13+dfsg-5) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../028-libnghttp2-14_1.56.0-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.56.0-1) ... Selecting previously unselected package libpsl5:amd64. Preparing to unpack .../029-libpsl5_0.21.2-1+b1_amd64.deb ... Unpacking libpsl5:amd64 (0.21.2-1+b1) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../030-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:amd64. Preparing to unpack .../031-libssh2-1_1.11.0-2_amd64.deb ... Unpacking libssh2-1:amd64 (1.11.0-2) ... Selecting previously unselected package libcurl4:amd64. Preparing to unpack .../032-libcurl4_8.3.0-1_amd64.deb ... Unpacking libcurl4:amd64 (8.3.0-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../033-libexpat1_2.5.0-2_amd64.deb ... Unpacking libexpat1:amd64 (2.5.0-2) ... Selecting previously unselected package libjsoncpp25:amd64. Preparing to unpack .../034-libjsoncpp25_1.9.5-6_amd64.deb ... Unpacking libjsoncpp25:amd64 (1.9.5-6) ... Selecting previously unselected package librhash0:amd64. Preparing to unpack .../035-librhash0_1.4.3-3_amd64.deb ... Unpacking librhash0:amd64 (1.4.3-3) ... Selecting previously unselected package libuv1:amd64. Preparing to unpack .../036-libuv1_1.44.2-1_amd64.deb ... Unpacking libuv1:amd64 (1.44.2-1) ... Selecting previously unselected package cmake-data. Preparing to unpack .../037-cmake-data_3.27.6-1_all.deb ... Unpacking cmake-data (3.27.6-1) ... Selecting previously unselected package cmake. Preparing to unpack .../038-cmake_3.27.6-1_amd64.deb ... Unpacking cmake (3.27.6-1) ... Selecting previously unselected package gcc-13-arm-linux-gnueabihf-base:amd64. Preparing to unpack .../039-gcc-13-arm-linux-gnueabihf-base_13.2.0-2cross1_amd64.deb ... Unpacking gcc-13-arm-linux-gnueabihf-base:amd64 (13.2.0-2cross1) ... Selecting previously unselected package cpp-13-arm-linux-gnueabihf. Preparing to unpack .../040-cpp-13-arm-linux-gnueabihf_13.2.0-2cross1_amd64.deb ... Unpacking cpp-13-arm-linux-gnueabihf (13.2.0-2cross1) ... Selecting previously unselected package cpp-arm-linux-gnueabihf. Preparing to unpack .../041-cpp-arm-linux-gnueabihf_4%3a13.2.0-1_amd64.deb ... Unpacking cpp-arm-linux-gnueabihf (4:13.2.0-1) ... Selecting previously unselected package cross-config. Preparing to unpack .../042-cross-config_2.6.20_all.deb ... Unpacking cross-config (2.6.20) ... Selecting previously unselected package gcc-13-cross-base. Preparing to unpack .../043-gcc-13-cross-base_13.2.0-2cross1_all.deb ... Unpacking gcc-13-cross-base (13.2.0-2cross1) ... Selecting previously unselected package libc6-armhf-cross. Preparing to unpack .../044-libc6-armhf-cross_2.37-3cross1_all.deb ... Unpacking libc6-armhf-cross (2.37-3cross1) ... Selecting previously unselected package libgcc-s1-armhf-cross. Preparing to unpack .../045-libgcc-s1-armhf-cross_13.2.0-2cross1_all.deb ... Unpacking libgcc-s1-armhf-cross (13.2.0-2cross1) ... Selecting previously unselected package libgomp1-armhf-cross. Preparing to unpack .../046-libgomp1-armhf-cross_13.2.0-2cross1_all.deb ... Unpacking libgomp1-armhf-cross (13.2.0-2cross1) ... Selecting previously unselected package libatomic1-armhf-cross. Preparing to unpack .../047-libatomic1-armhf-cross_13.2.0-2cross1_all.deb ... Unpacking libatomic1-armhf-cross (13.2.0-2cross1) ... Selecting previously unselected package libasan8-armhf-cross. Preparing to unpack .../048-libasan8-armhf-cross_13.2.0-2cross1_all.deb ... Unpacking libasan8-armhf-cross (13.2.0-2cross1) ... Selecting previously unselected package libstdc++6-armhf-cross. Preparing to unpack .../049-libstdc++6-armhf-cross_13.2.0-2cross1_all.deb ... Unpacking libstdc++6-armhf-cross (13.2.0-2cross1) ... Selecting previously unselected package libubsan1-armhf-cross. Preparing to unpack .../050-libubsan1-armhf-cross_13.2.0-2cross1_all.deb ... Unpacking libubsan1-armhf-cross (13.2.0-2cross1) ... Selecting previously unselected package libgcc-13-dev-armhf-cross. Preparing to unpack .../051-libgcc-13-dev-armhf-cross_13.2.0-2cross1_all.deb ... Unpacking libgcc-13-dev-armhf-cross (13.2.0-2cross1) ... 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Unpacking libgsl-dev:armhf (2.7.1+dfsg-5) ... Selecting previously unselected package libnewuoa0:armhf. Preparing to unpack .../167-libnewuoa0_0.1.2-1_armhf.deb ... Unpacking libnewuoa0:armhf (0.1.2-1) ... Selecting previously unselected package libnewuoa-dev:armhf. Preparing to unpack .../168-libnewuoa-dev_0.1.2-1_armhf.deb ... Unpacking libnewuoa-dev:armhf (0.1.2-1) ... Selecting previously unselected package libpkgconf3:amd64. Preparing to unpack .../169-libpkgconf3_1.8.1-1_amd64.deb ... Unpacking libpkgconf3:amd64 (1.8.1-1) ... Selecting previously unselected package pkgconf-bin. Preparing to unpack .../170-pkgconf-bin_1.8.1-1_amd64.deb ... Unpacking pkgconf-bin (1.8.1-1) ... Selecting previously unselected package pkgconf:armhf. Preparing to unpack .../171-pkgconf_1.8.1-1_armhf.deb ... Unpacking pkgconf:armhf (1.8.1-1) ... Selecting previously unselected package pkg-config:armhf. Preparing to unpack .../172-pkg-config_1.8.1-1_armhf.deb ... Unpacking pkg-config:armhf (1.8.1-1) ... Selecting previously unselected package sbuild-build-depends-main-dummy:armhf. Preparing to unpack .../173-sbuild-build-depends-main-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-2) ... Setting up libexpat1:amd64 (2.5.0-2) ... Setting up libpipeline1:amd64 (1.5.7-1) ... Setting up libfile-which-perl (1.27-2) ... Setting up libpsl5:amd64 (0.21.2-1+b1) ... Setting up libc6-armhf-cross (2.37-3cross1) ... Setting up libicu72:amd64 (72.1-3) ... Setting up bsdextrautils (2.39.2-1) ... Setting up libmagic-mgc (1:5.45-2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.11.6) ... Setting up libbrotli1:amd64 (1.0.9-2+b6) ... Setting up libnghttp2-14:amd64 (1.56.0-1) ... Setting up libmagic1:amd64 (1:5.45-2) ... Setting up linux-libc-dev:armhf (6.5.3-1) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-13+b1) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-2) ... Setting up libccp4-data (8.0.0-2) ... Setting up libyaml-perl (1.30-2) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-3) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.20) ... Setting up libpkgconf3:amd64 (1.8.1-1) ... Setting up libuv1:amd64 (1.44.2-1) ... Setting up gcc-13-base:armhf (13.2.0-4) ... Setting up libx11-data (2:1.8.6-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up gcc-13-cross-base (13.2.0-2cross1) ... Setting up libproc2-0:amd64 (2:4.0.3-1) ... Setting up linux-libc-dev-armhf-cross (6.3.7-1cross1) ... Setting up autopoint (0.21-13) ... Setting up libjsoncpp25:amd64 (1.9.5-6) ... Setting up icu-devtools (72.1-3) ... Setting up pkgconf-bin (1.8.1-1) ... Setting up libncursesw6:amd64 (6.4+20230625-2) ... Setting up libcifpp-data (5.0.7.1-3) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-3) ... Setting up autoconf (2.71-3) ... Setting up gcc-13-arm-linux-gnueabihf-base:amd64 (13.2.0-2cross1) ... Setting up sensible-utils (0.0.20) ... Setting up librhash0:amd64 (1.4.3-3) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up procps (2:4.0.3-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libssh2-1:amd64 (1.11.0-2) ... Setting up cmake-data (3.27.6-1) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up binutils-arm-linux-gnueabihf (2.41-5) ... Setting up libelf1:amd64 (0.189-4) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3) ... Setting up liblocale-gettext-perl (1.07-6) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libgomp1-armhf-cross (13.2.0-2cross1) ... Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-13+b1) ... 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Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-13-dev-armhf-cross (13.2.0-2cross1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up cmake (3.27.6-1) ... Setting up libstdc++-13-dev-armhf-cross (13.2.0-2cross1) ... Setting up debhelper (13.11.6) ... 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Setting up liblzma5:armhf (5.4.4-0.1) ... Setting up libgslcblas0:armhf (2.7.1+dfsg-5) ... Setting up libmmdb2-0:armhf (2.0.22-1) ... Setting up libssl3:armhf (3.0.11-1) ... Setting up libgsl27:armhf (2.7.1+dfsg-5) ... Setting up zlib1g:armhf (1:1.2.13.dfsg-3) ... Setting up libcrypt1:armhf (1:4.4.36-2) ... Setting up libcom-err2:armhf (1.47.0-2+b1) ... Setting up libnewuoa0:armhf (0.1.2-1) ... Setting up libgomp1:armhf (13.2.0-4) ... Setting up libcap2:armhf (1:2.66-4) ... Setting up libkrb5support0:armhf (1.20.1-4) ... Setting up libnl-route-3-200:armhf (3.7.0-0.2+b1) ... Setting up libmunge2:armhf (0.5.15-2) ... Setting up libboost-regex1.74.0:armhf (1.74.0+ds1-22) ... Setting up libevent-core-2.1-7:armhf (2.1.12-stable-8) ... Setting up libatomic1:armhf (13.2.0-4) ... Setting up libmmdb2-dev:armhf (2.0.22-1) ... Setting up libccp4c0:armhf (8.0.0-2) ... Setting up libk5crypto3:armhf (1.20.1-4) ... Setting up libgfortran5:armhf (13.2.0-4) ... Setting up libudev1:armhf (254.4-1) ... Setting up libubsan1:armhf (13.2.0-4) ... Setting up libgcc-13-dev:armhf (13.2.0-4) ... Setting up libcrypt-dev:armhf (1:4.4.36-2) ... Setting up libx11-6:armhf (2:1.8.6-1) ... Setting up libkrb5-3:armhf (1.20.1-4) ... Setting up libxml2:armhf (2.9.14+dfsg-1.3) ... Setting up libevent-pthreads-2.1-7:armhf (2.1.12-stable-8) ... Setting up libccp4f0:armhf (8.0.0-2) ... Setting up libpciaccess0:armhf (0.17-2) ... Setting up libibverbs1:armhf (47.0-1) ... Setting up libgsl-dev:armhf (2.7.1+dfsg-5) ... Setting up libccp4-dev:armhf (8.0.0-2) ... Setting up libnewuoa-dev:armhf (0.1.2-1) ... Setting up libxext6:armhf (2:1.3.4-1+b1) ... Setting up libxnvctrl0:armhf (525.125.06-1) ... Setting up libcifpp5:armhf (5.0.7.1-3) ... Setting up libhwloc15:armhf (2.9.3-1) ... Setting up libgssapi-krb5-2:armhf (1.20.1-4) ... Setting up libtirpc3:armhf (1.3.3+ds-1) ... Setting up librdmacm1:armhf (47.0-1) ... Setting up libhwloc-plugins:armhf (2.9.3-1) ... Setting up libtirpc-dev:armhf (1.3.3+ds-1) ... Setting up libnsl2:armhf (1.3.0-2) ... Setting up libfabric1:armhf (1.17.0-3) ... Setting up libpmix2:armhf (5.0.1-2) ... Setting up libopenmpi3:armhf (4.1.5-3) ... Setting up sfftw2:armhf (2.1.5-6) ... Setting up fftw2:armhf (2.1.5-6) ... Setting up sfftw-dev:armhf (2.1.5-6) ... Setting up libclipper2:armhf (2.1.20201109-2) ... Setting up libnsl-dev:armhf (1.3.0-2) ... Setting up libc6-dev:armhf (2.37-10) ... Setting up fftw-dev:armhf (2.1.5-6) ... Setting up libicu-dev:armhf (72.1-3) ... Setting up libstdc++-13-dev:armhf (13.2.0-4) ... Setting up libboost1.74-dev:armhf (1.74.0+ds1-22) ... Setting up libclipper-dev:armhf (2.1.20201109-2) ... Setting up zlib1g-dev:armhf (1:1.2.13.dfsg-3) ... Setting up libboost-regex1.74-dev:armhf (1.74.0+ds1-22) ... Setting up libboost-dev:armhf (1.74.0.3) ... Setting up libboost-regex-dev:armhf (1.74.0.3) ... Setting up libcifpp-dev:armhf (5.0.7.1-3) ... Setting up sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.37-10) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-9-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.27-1 (2023-05-08) amd64 (x86_64) Toolchain package versions: binutils_2.41-5 dpkg-dev_1.22.0 g++-11_11.4.0-4 g++-13_13.2.0-4 gcc-11_11.4.0-4 gcc-13_13.2.0-4 libc6-dev_2.37-10 libstdc++-11-dev_11.4.0-4 libstdc++-13-dev_13.2.0-4 libstdc++-13-dev-armhf-cross_13.2.0-2cross1 libstdc++6_13.2.0-4 libstdc++6-armhf-cross_13.2.0-2cross1 linux-libc-dev_6.5.3-1 Package versions: adduser_3.137 apt_2.7.6 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-13 autotools-dev_20220109.1 base-files_13 base-passwd_3.6.1 bash_5.2.15-2+b5 binutils_2.41-5 binutils-arm-linux-gnueabihf_2.41-5 binutils-common_2.41-5 binutils-x86-64-linux-gnu_2.41-5 bsdextrautils_2.39.2-1 bsdutils_1:2.39.2-1 build-essential_12.10 bzip2_1.0.8-5+b1 cmake_3.27.6-1 cmake-data_3.27.6-1 coreutils_9.1-1 cpp_4:13.2.0-1 cpp-11_11.4.0-4 cpp-13_13.2.0-4 cpp-13-arm-linux-gnueabihf_13.2.0-2cross1 cpp-arm-linux-gnueabihf_4:13.2.0-1 cross-config_2.6.20 crossbuild-essential-armhf_12.10 dash_0.5.12-6 debconf_1.5.82 debhelper_13.11.6 debian-archive-keyring_2023.4 debianutils_5.13 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-4 dpkg_1.22.0 dpkg-cross_2.6.20 dpkg-dev_1.22.0 dwz_0.15-1 e2fsprogs_1.47.0-2+b1 fakeroot_1.32.1-1 fftw-dev_2.1.5-6 fftw2_2.1.5-6 file_1:5.45-2 findutils_4.9.0-5 g++_4:13.2.0-1 g++-11_11.4.0-4 g++-13_13.2.0-4 g++-13-arm-linux-gnueabihf_13.2.0-2cross1 g++-arm-linux-gnueabihf_4:13.2.0-1 gcc_4:13.2.0-1 gcc-11_11.4.0-4 gcc-11-base_11.4.0-4 gcc-12-base_12.3.0-9 gcc-13_13.2.0-4 gcc-13-arm-linux-gnueabihf_13.2.0-2cross1 gcc-13-arm-linux-gnueabihf-base_13.2.0-2cross1 gcc-13-base_13.2.0-4 gcc-13-cross-base_13.2.0-2cross1 gcc-9-base_9.5.0-4 gcc-arm-linux-gnueabihf_4:13.2.0-1 gettext_0.21-13+b1 gettext-base_0.21-13+b1 gpgv_2.2.40-1.1 grep_3.11-3 groff-base_1.23.0-2 gzip_1.12-1 hostname_3.23+nmu1 icu-devtools_72.1-3 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-3 libapt-pkg6.0_2.7.6 libarchive-zip-perl_1.68-1 libarchive13_3.6.2-1 libasan6_11.4.0-4 libasan8_13.2.0-4 libasan8-armhf-cross_13.2.0-2cross1 libatomic1_13.2.0-4 libatomic1-armhf-cross_13.2.0-2cross1 libattr1_1:2.5.1-4 libaudit-common_1:3.1.1-1 libaudit1_1:3.1.1-1 libbinutils_2.41-5 libblkid1_2.39.2-1 libboost-dev_1.74.0.3 libboost-regex-dev_1.74.0.3 libboost-regex1.74-dev_1.74.0+ds1-22 libboost-regex1.74.0_1.74.0+ds1-22 libboost1.74-dev_1.74.0+ds1-22 libbrotli1_1.0.9-2+b6 libbsd0_0.11.7-4 libbz2-1.0_1.0.8-5+b1 libc-bin_2.37-10 libc-dev-bin_2.37-10 libc6_2.37-10 libc6-armhf-cross_2.37-3cross1 libc6-dev_2.37-10 libc6-dev-armhf-cross_2.37-3cross1 libcap-ng0_0.8.3-1+b3 libcap2_1:2.66-4 libcc1-0_13.2.0-4 libccp4-data_8.0.0-2 libccp4-dev_8.0.0-2 libccp4c0_8.0.0-2 libccp4f0_8.0.0-2 libcifpp-data_5.0.7.1-3 libcifpp-dev_5.0.7.1-3 libcifpp5_5.0.7.1-3 libclipper-dev_2.1.20201109-2 libclipper2_2.1.20201109-2 libcom-err2_1.47.0-2+b1 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-2 libcrypt-dev_1:4.4.36-2 libcrypt1_1:4.4.36-2 libctf-nobfd0_2.41-5 libctf0_2.41-5 libcurl4_8.3.0-1 libdb5.3_5.3.28+dfsg2-2 libdebconfclient0_0.271 libdebhelper-perl_13.11.6 libdebian-dpkgcross-perl_2.6.20 libdpkg-perl_1.22.0 libelf1_0.189-4 libevent-core-2.1-7_2.1.12-stable-8 libevent-pthreads-2.1-7_2.1.12-stable-8 libexpat1_2.5.0-2 libext2fs2_1.47.0-2+b1 libfabric1_1.17.0-3 libfakeroot_1.32.1-1 libffi8_3.4.4-1 libfile-find-rule-perl_0.34-3 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.13.1-1 libfile-which-perl_1.27-2 libgcc-11-dev_11.4.0-4 libgcc-13-dev_13.2.0-4 libgcc-13-dev-armhf-cross_13.2.0-2cross1 libgcc-s1_13.2.0-4 libgcc-s1-armhf-cross_13.2.0-2cross1 libgcrypt20_1.10.2-3 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgfortran5_13.2.0-4 libgmp10_2:6.3.0+dfsg-2 libgnutls30_3.8.1-4+b1 libgomp1_13.2.0-4 libgomp1-armhf-cross_13.2.0-2cross1 libgpg-error0_1.47-2 libgprofng0_2.41-5 libgsl-dev_2.7.1+dfsg-5 libgsl27_2.7.1+dfsg-5 libgslcblas0_2.7.1+dfsg-5 libgssapi-krb5-2_1.20.1-4 libhogweed6_3.9.1-2 libhwasan0_13.2.0-4 libhwloc-plugins_2.9.3-1 libhwloc15_2.9.3-1 libibverbs1_47.0-1 libicu-dev_72.1-3 libicu72_72.1-3 libidn2-0_2.3.4-1+b1 libio-string-perl_1.08-4 libisl23_0.26-3 libitm1_13.2.0-4 libjansson4_2.14-2 libjsoncpp25_1.9.5-6 libk5crypto3_1.20.1-4 libkeyutils1_1.6.3-2 libkrb5-3_1.20.1-4 libkrb5support0_1.20.1-4 libldap-2.5-0_2.5.13+dfsg-5 liblocale-gettext-perl_1.07-6 liblsan0_13.2.0-4 liblz4-1_1.9.4-1 liblzma5_5.4.4-0.1 libmagic-mgc_1:5.45-2 libmagic1_1:5.45-2 libmd0_1.1.0-1 libmmdb2-0_2.0.22-1 libmmdb2-dev_2.0.22-1 libmount1_2.39.2-1 libmpc3_1.3.1-1 libmpfr6_4.2.1-1 libmunge2_0.5.15-2 libncursesw6_6.4+20230625-2 libnettle8_3.9.1-2 libnewuoa-dev_0.1.2-1 libnewuoa0_0.1.2-1 libnghttp2-14_1.56.0-1 libnl-3-200_3.7.0-0.2+b1 libnl-route-3-200_3.7.0-0.2+b1 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnumber-compare-perl_0.03-3 libopenmpi3_4.1.5-3 libp11-kit0_0.25.0-4 libpam-modules_1.5.2-7 libpam-modules-bin_1.5.2-7 libpam-runtime_1.5.2-7 libpam0g_1.5.2-7 libpciaccess0_0.17-2 libpcre2-8-0_10.42-4 libpcre3_2:8.39-15 libperl5.34_5.34.0-5 libperl5.36_5.36.0-9 libpipeline1_1.5.7-1 libpkgconf3_1.8.1-1 libpmix2_5.0.1-2 libproc2-0_2:4.0.3-1 libpsl5_0.21.2-1+b1 libquadmath0_13.2.0-4 librdmacm1_47.0-1 librhash0_1.4.3-3 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.28+dfsg1-3 libsasl2-modules-db_2.1.28+dfsg1-3 libseccomp2_2.5.4-1+b3 libselinux1_3.5-1 libsemanage-common_3.5-1 libsemanage2_3.5-1 libsepol2_3.5-1 libsframe1_2.41-5 libsmartcols1_2.39.2-1 libss2_1.47.0-2+b1 libssh2-1_1.11.0-2 libssl3_3.0.11-1 libstdc++-11-dev_11.4.0-4 libstdc++-13-dev_13.2.0-4 libstdc++-13-dev-armhf-cross_13.2.0-2cross1 libstdc++6_13.2.0-4 libstdc++6-armhf-cross_13.2.0-2cross1 libsub-override-perl_0.09-4 libsystemd0_254.4-1 libtasn1-6_4.19.0-3 libtext-glob-perl_0.11-3 libtinfo6_6.4+20230625-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-7 libtsan0_11.4.0-4 libtsan2_13.2.0-4 libubsan1_13.2.0-4 libubsan1-armhf-cross_13.2.0-2cross1 libuchardet0_0.0.7-1 libudev1_254.4-1 libunistring2_1.0-2 libunistring5_1.1-2 libuuid1_2.39.2-1 libuv1_1.44.2-1 libx11-6_2:1.8.6-1 libx11-data_2:1.8.6-1 libxau6_1:1.0.9-1 libxcb1_1.15-1 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.4-1+b1 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b1 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-2 libxml2_2.9.14+dfsg-1.3 libxnvctrl0_525.125.06-1 libxxhash0_0.8.2-2 libyaml-perl_1.30-2 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.5.3-1 linux-libc-dev-armhf-cross_6.3.7-1cross1 login_1:4.13+dfsg1-1+b1 logsave_1.47.0-2+b1 m4_1.4.19-4 make_4.3-4.1 man-db_2.12.0-1 mawk_1.3.4.20230808-1 mount_2.39.2-1 ncurses-base_6.4+20230625-2 ncurses-bin_6.4+20230625-2 ocl-icd-libopencl1_2.3.2-1 passwd_1:4.13+dfsg1-1+b1 patch_2.7.6-7 perl_5.36.0-9 perl-base_5.36.0-9 perl-modules-5.34_5.34.0-5 perl-modules-5.36_5.36.0-9 pkg-config_1.8.1-1 pkgconf_1.8.1-1 pkgconf-bin_1.8.1-1 po-debconf_1.0.21+nmu1 procps_2:4.0.3-1 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-1 sensible-utils_0.0.20 sfftw-dev_2.1.5-6 sfftw2_2.1.5-6 sysvinit-utils_3.08-1 tar_1.34+dfsg-1.2 tzdata_2023c-10 ucf_3.0043+nmu1 usrmerge_37 util-linux_2.39.2-1 util-linux-extra_2.39.2-1 xz-utils_5.4.4-0.1 zlib1g_1:1.2.13.dfsg-3 zlib1g-dev_1:1.2.13.dfsg-3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libpdb-redo Binary: libpdb-redo-dev, libpdb-redo3 Architecture: any Version: 3.0.5-2 Maintainer: Debian Med Packaging Team Uploaders: Maarten L. Hekkelman Homepage: https://github.com/PDB-REDO/libpdb-redo Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/libpdb-redo Vcs-Git: https://salsa.debian.org/med-team/libpdb-redo.git Testsuite: autopkgtest Testsuite-Triggers: @builddeps@, mrc Build-Depends: debhelper-compat (= 13), libcifpp-dev (>= 5.0.7), cmake, libnewuoa-dev (>= 0.1.2), pkg-config, libgsl-dev, libboost-dev, libboost-regex-dev, libclipper-dev, zlib1g-dev, libccp4-dev (>= 6.5.1-5) Package-List: libpdb-redo-dev deb libdevel optional arch=any libpdb-redo3 deb libs optional arch=any Checksums-Sha1: e35e45e80dc2966df0e90c13c888b09bf63f5cf3 864015 libpdb-redo_3.0.5.orig.tar.gz 48e1a00a6a64ea016584807257287a58f28c4d2c 4160 libpdb-redo_3.0.5-2.debian.tar.xz Checksums-Sha256: 00222c575f1b291cc6847c0c2ec3f0ccd3b79adb2891ed20c8629061ca69f822 864015 libpdb-redo_3.0.5.orig.tar.gz 8f98088f835db964d4b276c9a05c758fa22ff07bc3f81f9ecab81c251105f6d5 4160 libpdb-redo_3.0.5-2.debian.tar.xz Files: bfdfcd5d48dbe171d7a2af4c5fd717dc 864015 libpdb-redo_3.0.5.orig.tar.gz 27749485b7fa028d7f67d83f0d7667d3 4160 libpdb-redo_3.0.5-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJKBAEBCgA0FiEEpytoJCJrtAfiS56AWHUD7Hrn7c4FAmPcxKIWHG1hYXJ0ZW5A aGVra2VsbWFuLmNvbQAKCRBYdQPseuftzj7bEADM0nKt0sKGWYtHDAmJHuGh0kBK rT6gEyFONYmHJP91QEho98PVQtmyvFu4Zcrwo29v2IjlIWb1zGClCr4u9zqa14Ti xk/VQYhWS368CDC2hfHKqULrBIIur50tMYBWvUFGU8C9l6DLcB/n0utnBsnxqhgS SZcG9w90vrQbhSj8vWkBB+bv9tkVS/Ii85mePl5i7BqEqipbKGaKi6pcmGV+vI6F QG3ZIk3owQjBHdEG87InIjRE2YuDwLr4JaXkERxwpQjSgC3v5ZE1rkqu5icgx4iC xraryRzhnFlAk/SQV0k39bDVbRUHRLcpv4Wv32Zpd4eo0W6wzzY7mGFFbp5oT9qt QgPB3oNgz/kDIpfV6bKJzwPk09IMFdUyK8iTlo0Yh40585MMisQCluMs+IevT+NE V6GTkKbGpsSN4AXQ/t1KCWKYAfmMzVVHfZdF5HNEq15xv6nlp45iUrHlUFA+cz8t ABeLVkBg8qLOG5+oS006B7PLdZ7+2JHEMjlprUHAxBFJdnpeDnJbRRxctrZhOzal yDUeXIytzKnPEIkE+JiQaxlRdD06KcIhI50VkKsVi0GlZNynx+1UI0UhYC/YndTu HEzG/NGAt7JtAdfevQan2c4c82prMFi5ODx7WiCzVb/QxRVbfTcZE0GGyAzowfUR FuMNCbad57u0slf8kQ== =MksD -----END PGP SIGNATURE----- gpgv: Signature made Fri Feb 3 08:24:02 2023 UTC gpgv: using RSA key A72B6824226BB407E24B9E80587503EC7AE7EDCE gpgv: issuer "maarten@hekkelman.com" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libpdb-redo_3.0.5-2.dsc: no acceptable signature found dpkg-source: info: extracting libpdb-redo in /<> dpkg-source: info: unpacking libpdb-redo_3.0.5.orig.tar.gz dpkg-source: info: unpacking libpdb-redo_3.0.5-2.debian.tar.xz Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-33e30ece-e121-49a0-b208-c6f7ae8b449b SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aarmhf -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package libpdb-redo dpkg-buildpackage: info: source version 3.0.5-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Maarten L. Hekkelman dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- -DBUILD_SHARED_LIBS=ON -DPDB_REDO_BUILD_TESTS=ON cd obj-arm-linux-gnueabihf && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=armv7l -DCMAKE_C_COMPILER=arm-linux-gnueabihf-gcc -DCMAKE_CXX_COMPILER=arm-linux-gnueabihf-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/arm-linux-gnueabihf-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/arm-linux-gnueabihf-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/arm-linux-gnueabihf-qmake -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DBUILD_SHARED_LIBS=ON -DPDB_REDO_BUILD_TESTS=ON .. -- The CXX compiler identification is GNU 13.2.0 -- The C compiler identification is GNU 13.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/arm-linux-gnueabihf-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/arm-linux-gnueabihf-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Looking for ccp4/ccp4_general.h - /usr/include -- Found CCP4: /usr/lib/arm-linux-gnueabihf/libccp4c.so -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for clipper/clipper.h - /usr/include -- Found CCP4: /usr/lib/arm-linux-gnueabihf/libclipper-core.so -- FFTW2 libraries - /usr/lib/libsfftw.so -- - /usr/lib/libsrfftw.so -- FFTW2 header directory - /usr/include -- Performing Test _LINKING_WITH_CLIPPER_CORE -- Performing Test _LINKING_WITH_CLIPPER_CORE - Success -- Looking for clipper/clipper-ccp4.h - /usr/include -- Found CCP4: /usr/lib/arm-linux-gnueabihf/libclipper-ccp4.so -- Looking for clipper/clipper-contrib.h - /usr/include -- Found CCP4: /usr/lib/arm-linux-gnueabihf/libclipper-contrib.so -- CCP4 include directory: /usr/include -- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.13") -- Found Boost: /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.74.0/BoostConfig.cmake (found version "1.74.0") found components: regex -- Found GSL: /usr/include (found version "2.7.1") -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Configuring done (1.8s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED PDB_REDO_BUILD_TESTS PKGCONFIG_EXECUTABLE QMAKE_EXECUTABLE -- Build files have been written to: /<>/obj-arm-linux-gnueabihf make[1]: Leaving directory '/<>' dh_auto_build -a cd obj-arm-linux-gnueabihf && make -j1 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/<>/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/<> -B/<>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-arm-linux-gnueabihf/CMakeFiles /<>/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-arm-linux-gnueabihf' make -f CMakeFiles/pdb-redo.dir/build.make CMakeFiles/pdb-redo.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/CMakeFiles/pdb-redo.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f CMakeFiles/pdb-redo.dir/build.make CMakeFiles/pdb-redo.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 7%] Building CXX object CMakeFiles/pdb-redo.dir/src/AtomShape.cpp.o /usr/bin/arm-linux-gnueabihf-g++ -DBOOST_ALL_NO_LIB -DBOOST_REGEX_DYN_LINK -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -Dpdb_redo_EXPORTS -I/<>/include -I/<>/obj-arm-linux-gnueabihf -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++17 -fPIC -MD -MT CMakeFiles/pdb-redo.dir/src/AtomShape.cpp.o -MF CMakeFiles/pdb-redo.dir/src/AtomShape.cpp.o.d -o CMakeFiles/pdb-redo.dir/src/AtomShape.cpp.o -c /<>/src/AtomShape.cpp /<>/src/AtomShape.cpp: In constructor ‘pdb_redo::AtomShapeImpl::AtomShapeImpl(cif::point, cif::atom_type, int, float, float, float, float, bool)’: /<>/src/AtomShape.cpp:477:23: warning: possibly dangling reference to a temporary [-Wdangling-reference] 477 | auto &D = | ^ /<>/src/AtomShape.cpp:478:76: note: the temporary was destroyed at the end of the full expression ‘cif::atom_type_traits(symbol).cif::atom_type_traits::elsf()’ 478 | mElectronScattering ? atom_type_traits(symbol).elsf() : atom_type_traits(symbol).wksf(charge); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /<>/src/AtomShape.cpp: In constructor ‘pdb_redo::AtomShapeAnisoImpl::AtomShapeAnisoImpl(cif::point, cif::atom_type, int, clipper::U_aniso_orth&, float, float, float, bool)’: /<>/src/AtomShape.cpp:554:23: warning: possibly dangling reference to a temporary [-Wdangling-reference] 554 | auto &D = | ^ /<>/src/AtomShape.cpp:555:76: note: the temporary was destroyed at the end of the full expression ‘cif::atom_type_traits(symbol).cif::atom_type_traits::elsf()’ 555 | mElectronScattering ? atom_type_traits(symbol).elsf() : atom_type_traits(symbol).wksf(charge); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ [ 14%] Building CXX object CMakeFiles/pdb-redo.dir/src/BondMap.cpp.o /usr/bin/arm-linux-gnueabihf-g++ -DBOOST_ALL_NO_LIB -DBOOST_REGEX_DYN_LINK -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -Dpdb_redo_EXPORTS -I/<>/include -I/<>/obj-arm-linux-gnueabihf -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++17 -fPIC -MD -MT CMakeFiles/pdb-redo.dir/src/BondMap.cpp.o -MF CMakeFiles/pdb-redo.dir/src/BondMap.cpp.o.d -o CMakeFiles/pdb-redo.dir/src/BondMap.cpp.o -c /<>/src/BondMap.cpp [ 21%] Building CXX object CMakeFiles/pdb-redo.dir/src/ClipperWrapper.cpp.o /usr/bin/arm-linux-gnueabihf-g++ -DBOOST_ALL_NO_LIB -DBOOST_REGEX_DYN_LINK -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -Dpdb_redo_EXPORTS -I/<>/include -I/<>/obj-arm-linux-gnueabihf -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++17 -fPIC -MD -MT CMakeFiles/pdb-redo.dir/src/ClipperWrapper.cpp.o -MF CMakeFiles/pdb-redo.dir/src/ClipperWrapper.cpp.o.d -o CMakeFiles/pdb-redo.dir/src/ClipperWrapper.cpp.o -c /<>/src/ClipperWrapper.cpp [ 28%] Building CXX object CMakeFiles/pdb-redo.dir/src/Compound.cpp.o /usr/bin/arm-linux-gnueabihf-g++ -DBOOST_ALL_NO_LIB -DBOOST_REGEX_DYN_LINK -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -Dpdb_redo_EXPORTS -I/<>/include -I/<>/obj-arm-linux-gnueabihf -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++17 -fPIC -MD -MT CMakeFiles/pdb-redo.dir/src/Compound.cpp.o -MF CMakeFiles/pdb-redo.dir/src/Compound.cpp.o.d -o CMakeFiles/pdb-redo.dir/src/Compound.cpp.o -c /<>/src/Compound.cpp [ 35%] Building CXX object CMakeFiles/pdb-redo.dir/src/DistanceMap.cpp.o /usr/bin/arm-linux-gnueabihf-g++ -DBOOST_ALL_NO_LIB -DBOOST_REGEX_DYN_LINK -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -Dpdb_redo_EXPORTS -I/<>/include -I/<>/obj-arm-linux-gnueabihf -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++17 -fPIC -MD -MT CMakeFiles/pdb-redo.dir/src/DistanceMap.cpp.o -MF CMakeFiles/pdb-redo.dir/src/DistanceMap.cpp.o.d -o CMakeFiles/pdb-redo.dir/src/DistanceMap.cpp.o -c /<>/src/DistanceMap.cpp /<>/src/DistanceMap.cpp: In member function ‘std::vector pdb_redo::DistanceMap::near(const cif::mm::atom&, float) const’: /<>/src/DistanceMap.cpp:448:15: warning: possibly dangling reference to a temporary [-Wdangling-reference] 448 | auto &atom_site = atom.get_row().get_category(); | ^~~~~~~~~ /<>/src/DistanceMap.cpp:448:54: note: the temporary was destroyed at the end of the full expression ‘(& atom)->cif::mm::atom::get_row().cif::row_handle::get_category()’ 448 | auto &atom_site = atom.get_row().get_category(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/arm-linux-gnueabihf/include/c++/13/vector:72, from /usr/include/cif++/forward_decl.hpp:32, from /usr/include/cif++/category.hpp:29, from /usr/include/cif++/datablock.hpp:29, from /usr/include/cif++/file.hpp:32, from /usr/include/cif++.hpp:30, from /<>/include/pdb-redo/ClipperWrapper.hpp:29, from /<>/src/DistanceMap.cpp:32: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {clipper::RTop_orth}; _Tp = clipper::RTop_orth; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {clipper::RTop_orth}; _Tp = clipper::RTop_orth; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 42%] Building CXX object CMakeFiles/pdb-redo.dir/src/MapMaker.cpp.o /usr/bin/arm-linux-gnueabihf-g++ -DBOOST_ALL_NO_LIB -DBOOST_REGEX_DYN_LINK -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -Dpdb_redo_EXPORTS -I/<>/include -I/<>/obj-arm-linux-gnueabihf -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++17 -fPIC -MD -MT CMakeFiles/pdb-redo.dir/src/MapMaker.cpp.o -MF CMakeFiles/pdb-redo.dir/src/MapMaker.cpp.o.d -o CMakeFiles/pdb-redo.dir/src/MapMaker.cpp.o -c /<>/src/MapMaker.cpp /<>/src/MapMaker.cpp: In member function ‘void pdb_redo::MapMaker::fixMTZ() [with FTYPE = float]’: /<>/src/MapMaker.cpp:1118:22: note: parameter passing for argument of type ‘clipper::datatypes::F_phi’ when C++17 is enabled changed to match C++14 in GCC 10.1 1118 | auto mFo = mFbData[ih] - mFdData[ih]; | ^~~ In file included from /usr/arm-linux-gnueabihf/include/c++/13/vector:72, from /usr/include/clipper/ccp4/ccp4_utils.h:49, from /usr/include/clipper/clipper-ccp4.h:7, from /<>/src/MapMaker.cpp:31: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:529:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 529 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void clipper::Array2d::resize(const int&, const int&, const T&) [with T = double]’ at /usr/include/clipper/core/clipper_types.h:379:40, inlined from ‘clipper::Matrix::Matrix(const int&, const int&, T) [with T = double]’ at /usr/include/clipper/core/clipper_types.h:406:27, inlined from ‘clipper::BasisFn_base::Fderiv::Fderiv(const int&)’ at /usr/include/clipper/core/resol_fn.h:80:43, inlined from ‘clipper::BasisFn_base::BasisFn_base(const int&)’ at /usr/include/clipper/core/resol_fn.h:86:46, inlined from ‘clipper::BasisFn_spline::BasisFn_spline(const clipper::HKL_data_base&, const int&, clipper::ftype)’ at /usr/include/clipper/core/resol_basisfn.h:136:120: /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_vector.h:1034:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {clipper::Atom}; _Tp = clipper::Atom; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {clipper::Atom}; _Tp = clipper::Atom; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object CMakeFiles/pdb-redo.dir/src/Ramachandran.cpp.o /usr/bin/arm-linux-gnueabihf-g++ -DBOOST_ALL_NO_LIB -DBOOST_REGEX_DYN_LINK -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -Dpdb_redo_EXPORTS -I/<>/include -I/<>/obj-arm-linux-gnueabihf -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++17 -fPIC -MD -MT CMakeFiles/pdb-redo.dir/src/Ramachandran.cpp.o -MF CMakeFiles/pdb-redo.dir/src/Ramachandran.cpp.o.d -o CMakeFiles/pdb-redo.dir/src/Ramachandran.cpp.o -c /<>/src/Ramachandran.cpp [ 57%] Building CXX object CMakeFiles/pdb-redo.dir/src/ResolutionCalculator.cpp.o /usr/bin/arm-linux-gnueabihf-g++ -DBOOST_ALL_NO_LIB -DBOOST_REGEX_DYN_LINK -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -Dpdb_redo_EXPORTS -I/<>/include -I/<>/obj-arm-linux-gnueabihf -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++17 -fPIC -MD -MT CMakeFiles/pdb-redo.dir/src/ResolutionCalculator.cpp.o -MF CMakeFiles/pdb-redo.dir/src/ResolutionCalculator.cpp.o.d -o CMakeFiles/pdb-redo.dir/src/ResolutionCalculator.cpp.o -c /<>/src/ResolutionCalculator.cpp [ 64%] Building CXX object CMakeFiles/pdb-redo.dir/src/SkipList.cpp.o /usr/bin/arm-linux-gnueabihf-g++ -DBOOST_ALL_NO_LIB -DBOOST_REGEX_DYN_LINK -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -Dpdb_redo_EXPORTS -I/<>/include -I/<>/obj-arm-linux-gnueabihf -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++17 -fPIC -MD -MT CMakeFiles/pdb-redo.dir/src/SkipList.cpp.o -MF CMakeFiles/pdb-redo.dir/src/SkipList.cpp.o.d -o CMakeFiles/pdb-redo.dir/src/SkipList.cpp.o -c /<>/src/SkipList.cpp [ 71%] Building CXX object CMakeFiles/pdb-redo.dir/src/Statistics.cpp.o /usr/bin/arm-linux-gnueabihf-g++ -DBOOST_ALL_NO_LIB -DBOOST_REGEX_DYN_LINK -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -Dpdb_redo_EXPORTS -I/<>/include -I/<>/obj-arm-linux-gnueabihf -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++17 -fPIC -MD -MT CMakeFiles/pdb-redo.dir/src/Statistics.cpp.o -MF CMakeFiles/pdb-redo.dir/src/Statistics.cpp.o.d -o CMakeFiles/pdb-redo.dir/src/Statistics.cpp.o -c /<>/src/Statistics.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algobase.h:64, from /usr/arm-linux-gnueabihf/include/c++/13/string:51, from /usr/arm-linux-gnueabihf/include/c++/13/bits/locale_classes.h:40, from /usr/arm-linux-gnueabihf/include/c++/13/bits/ios_base.h:41, from /usr/arm-linux-gnueabihf/include/c++/13/ios:44, from /usr/arm-linux-gnueabihf/include/c++/13/istream:40, from /usr/arm-linux-gnueabihf/include/c++/13/fstream:40, from /<>/src/Statistics.cpp:27: /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_pair.h: In instantiation of ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]’: /<>/src/Statistics.cpp:545:41: required from here /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_pair.h:922:5: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 922 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:61, from /usr/arm-linux-gnueabihf/include/c++/13/functional:67, from /usr/include/cif++/condition.hpp:32, from /usr/include/cif++/category.hpp:31, from /usr/include/cif++/datablock.hpp:29, from /usr/include/cif++/file.hpp:32, from /usr/include/cif++.hpp:30, from /<>/src/Statistics.cpp:30: /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1812 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1918 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/13/vector:72, from /usr/include/cif++/forward_decl.hpp:32, from /usr/include/cif++/category.hpp:29: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {pdb_redo::ResidueStatistics}; _Tp = pdb_redo::ResidueStatistics; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const clipper::Coord_grid&, double&}; _Tp = pdb_redo::AtomGridData; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 In file included from /usr/arm-linux-gnueabihf/include/c++/13/set:62, from /usr/include/cif++/text.hpp:35, from /usr/include/cif++/item.hpp:31, from /usr/include/cif++/row.hpp:29, from /usr/include/cif++/condition.hpp:29: /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, std::pair >; _KeyOfValue = std::_Select1st, std::pair > >; _Compare = std::less >; _Alloc = std::allocator, std::pair > >]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, std::pair >, std::_Select1st, std::pair > >, std::less >, std::allocator, std::pair > > >::const_iterator’ changed in GCC 7.1 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = clipper::Coord_grid; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = pdb_redo::StatsCollector::cmpGPt; _Alloc = std::allocator >]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, pdb_redo::StatsCollector::cmpGPt, std::allocator > >::const_iterator’ changed in GCC 7.1 In file included from /usr/arm-linux-gnueabihf/include/c++/13/regex:56, from /usr/include/cif++/condition.hpp:34: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = clipper::Coord_grid; _Tp = double; _Compare = pdb_redo::StatsCollector::cmpGPt; _Alloc = std::allocator >]’, inlined from ‘pdb_redo::StatsCollector::sumDensity(std::vector&, GridPtDataMap&, std::map, std::vector >&) const::’ at /<>/src/Statistics.cpp:967:32, inlined from ‘void pdb_redo::iterateGrid(const clipper::Coord_orth&, float, const clipper::Xmap&, F&&) [with F = StatsCollector::sumDensity(std::vector&, GridPtDataMap&, std::map, std::vector >&) const::; FTYPE = float]’ at /<>/include/pdb-redo/Statistics.hpp:76:9, inlined from ‘void pdb_redo::StatsCollector::sumDensity(std::vector&, GridPtDataMap&, std::map, std::vector >&) const’ at /<>/src/Statistics.cpp:954:14: /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, pdb_redo::StatsCollector::cmpGPt, std::allocator > >::const_iterator’ changed in GCC 7.1 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 | std::tuple(__k), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const clipper::Coord_grid&, double&}; _Tp = pdb_redo::AtomGridData; _Alloc = std::allocator]’, inlined from ‘pdb_redo::StatsCollector::sumDensity(std::vector&, GridPtDataMap&, std::map, std::vector >&) const::’ at /<>/src/Statistics.cpp:968:29, inlined from ‘void pdb_redo::iterateGrid(const clipper::Coord_orth&, float, const clipper::Xmap&, F&&) [with F = StatsCollector::sumDensity(std::vector&, GridPtDataMap&, std::map, std::vector >&) const::; FTYPE = float]’ at /<>/include/pdb-redo/Statistics.hpp:76:9, inlined from ‘void pdb_redo::StatsCollector::sumDensity(std::vector&, GridPtDataMap&, std::map, std::vector >&) const’ at /<>/src/Statistics.cpp:954:14: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘pdb_redo::StatsCollector::sumDensity(std::vector&, GridPtDataMap&, std::map, std::vector >&) const::’ at /<>/src/Statistics.cpp:972:42, inlined from ‘void pdb_redo::iterateGrid(const clipper::Coord_orth&, float, const clipper::Xmap&, F&&) [with F = StatsCollector::sumDensity(std::vector&, GridPtDataMap&, std::map, std::vector >&) const::; FTYPE = float]’ at /<>/include/pdb-redo/Statistics.hpp:76:9, inlined from ‘void pdb_redo::StatsCollector::sumDensity(std::vector&, GridPtDataMap&, std::map, std::vector >&) const’ at /<>/src/Statistics.cpp:954:14: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {cif::mm::atom&, float&}; _Tp = pdb_redo::AtomData; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {cif::mm::atom&, float&}; _Tp = pdb_redo::AtomData; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {pdb_redo::ResidueStatistics}; _Tp = pdb_redo::ResidueStatistics; _Alloc = std::allocator]’, inlined from ‘std::vector pdb_redo::StatsCollector::collect(const residue_list&, pdb_redo::BoundingBox&, bool) const’ at /<>/src/Statistics.cpp:819:22: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {pdb_redo::ResidueStatistics}; _Tp = pdb_redo::ResidueStatistics; _Alloc = std::allocator]’, inlined from ‘std::vector pdb_redo::StatsCollector::collect(const residue_list&, pdb_redo::BoundingBox&, bool) const’ at /<>/src/Statistics.cpp:838:23: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = std::pair; _Compare = std::less >; _Alloc = std::allocator, std::pair > >]’, inlined from ‘void pdb_redo::StatsCollector::initialize()’ at /<>/src/Statistics.cpp:402:21: /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, std::pair >, std::_Select1st, std::pair > >, std::less >, std::allocator, std::pair > > >::const_iterator’ changed in GCC 7.1 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 | std::tuple(__k), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:4861:18, inlined from ‘void pdb_redo::StatsCollector::initialize()’ at /<>/src/Statistics.cpp:483:7: /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1947 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1948 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1949 | __comp); | ~~~~~~~ In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1950:31, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:4861:18, inlined from ‘void pdb_redo::StatsCollector::initialize()’ at /<>/src/Statistics.cpp:483:7: /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1864 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = std::pair; _Compare = std::less >; _Alloc = std::allocator, std::pair > >]’, inlined from ‘void pdb_redo::StatsCollector::initialize()’ at /<>/src/Statistics.cpp:545:23: /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, std::pair >, std::_Select1st, std::pair > >, std::less >, std::allocator, std::pair > > >::const_iterator’ changed in GCC 7.1 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 | std::tuple(__k), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:4861:18, inlined from ‘void pdb_redo::StatsCollector::initialize()’ at /<>/src/Statistics.cpp:483:7: /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1947 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1948 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1949 | __comp); | ~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = clipper::Coord_grid; _Tp = double; _Compare = pdb_redo::StatsCollector::cmpGPt; _Alloc = std::allocator >]’, inlined from ‘void pdb_redo::StatsCollector::collectSums(std::vector&, GridPtDataMap&) const’ at /<>/src/Statistics.cpp:997:36: /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, pdb_redo::StatsCollector::cmpGPt, std::allocator > >::const_iterator’ changed in GCC 7.1 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 | std::tuple(__k), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | std::tuple<>()); | ~~~~~~~~~~~~~~~ [ 78%] Building CXX object CMakeFiles/pdb-redo.dir/src/Symmetry-2.cpp.o /usr/bin/arm-linux-gnueabihf-g++ -DBOOST_ALL_NO_LIB -DBOOST_REGEX_DYN_LINK -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -Dpdb_redo_EXPORTS -I/<>/include -I/<>/obj-arm-linux-gnueabihf -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++17 -fPIC -MD -MT CMakeFiles/pdb-redo.dir/src/Symmetry-2.cpp.o -MF CMakeFiles/pdb-redo.dir/src/Symmetry-2.cpp.o.d -o CMakeFiles/pdb-redo.dir/src/Symmetry-2.cpp.o -c /<>/src/Symmetry-2.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/13/vector:72, from /usr/include/cif++/forward_decl.hpp:32, from /usr/include/cif++/category.hpp:29, from /usr/include/cif++/datablock.hpp:29, from /usr/include/cif++/file.hpp:32, from /usr/include/cif++.hpp:30, from /<>/src/Symmetry-2.cpp:30: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {clipper::Coord_orth}; _Tp = clipper::Coord_orth; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {clipper::Coord_orth}; _Tp = clipper::Coord_orth; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = clipper::Coord_orth; _Alloc = std::allocator]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘clipper::Coord_orth pdb_redo::CalculateOffsetForCell(const cif::mm::structure&, const clipper::Spacegroup&, const clipper::Cell&)’ at /<>/src/Symmetry-2.cpp:59:22: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {clipper::RTop_orth}; _Tp = clipper::RTop_orth; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {clipper::RTop_orth}; _Tp = clipper::RTop_orth; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object CMakeFiles/pdb-redo.dir/src/Minimizer.cpp.o /usr/bin/arm-linux-gnueabihf-g++ -DBOOST_ALL_NO_LIB -DBOOST_REGEX_DYN_LINK -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -Dpdb_redo_EXPORTS -I/<>/include -I/<>/obj-arm-linux-gnueabihf -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++17 -fPIC -MD -MT CMakeFiles/pdb-redo.dir/src/Minimizer.cpp.o -MF CMakeFiles/pdb-redo.dir/src/Minimizer.cpp.o.d -o CMakeFiles/pdb-redo.dir/src/Minimizer.cpp.o -c /<>/src/Minimizer.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/13/regex:59, from /<>/src/Minimizer.cpp:35: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {unsigned int, unsigned int, float&, float&}; _Tp = pdb_redo::BondRestraint; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {unsigned int, unsigned int, float&, float&}; _Tp = pdb_redo::BondRestraint; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {unsigned int, unsigned int, unsigned int, float&, float&}; _Tp = pdb_redo::AngleRestraint; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {unsigned int, unsigned int, unsigned int, float&, float&}; _Tp = pdb_redo::AngleRestraint; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {unsigned int, unsigned int, unsigned int, unsigned int, float&, float&, int&}; _Tp = pdb_redo::TorsionRestraint; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {unsigned int, unsigned int, unsigned int, unsigned int, float&, float&, int&}; _Tp = pdb_redo::TorsionRestraint; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {unsigned int, unsigned int, unsigned int, unsigned int, float}; _Tp = pdb_redo::ChiralVolumeRestraint; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::vector >, float&}; _Tp = pdb_redo::PlanarityRestraint; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {pdb_redo::TransPeptideRestraint}; _Tp = pdb_redo::TransPeptideRestraint; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {pdb_redo::PlanarityRestraint}; _Tp = pdb_redo::PlanarityRestraint; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {pdb_redo::PlanarityRestraint}; _Tp = pdb_redo::PlanarityRestraint; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {unsigned int&, unsigned int&, double&, double}; _Tp = pdb_redo::NonBondedContactRestraint; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {unsigned int, unsigned int, unsigned int, unsigned int, float&}; _Tp = pdb_redo::ChiralVolumeRestraint; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {unsigned int, unsigned int, unsigned int, unsigned int, float&}; _Tp = pdb_redo::ChiralVolumeRestraint; _Alloc = std::allocator]’, inlined from ‘void pdb_redo::Minimizer::addLinkRestraints(const cif::mm::residue&, const cif::mm::residue&, const std::string&, const std::string&, const pdb_redo::Link&)’ at /<>/src/Minimizer.cpp:715:40: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {pdb_redo::TransPeptideRestraint}; _Tp = pdb_redo::TransPeptideRestraint; _Alloc = std::allocator]’, inlined from ‘virtual void pdb_redo::Minimizer::addPolySection(const cif::mm::polymer&, int, int)’ at /<>/src/Minimizer.cpp:282:43: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::pair; _Alloc = std::allocator >]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘std::back_insert_iterator<_Container>& std::back_insert_iterator<_Container>::operator=(typename _Container::value_type&&) [with _Container = std::vector >]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_iterator.h:747:22, inlined from ‘_OIter std::transform(_IIter, _IIter, _OIter, _UnaryOperation) [with _IIter = __gnu_cxx::__normal_iterator >; _OIter = back_insert_iterator > >; _UnaryOperation = pdb_redo::Minimizer::addDensityMap(const XMap&, float)::]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:4309:12, inlined from ‘virtual void pdb_redo::Minimizer::addDensityMap(const XMap&, float)’ at /<>/src/Minimizer.cpp:326:11: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {unsigned int, unsigned int, unsigned int, unsigned int, float}; _Tp = pdb_redo::ChiralVolumeRestraint; _Alloc = std::allocator]’, inlined from ‘virtual void pdb_redo::Minimizer::addResidue(const cif::mm::residue&)’ at /<>/src/Minimizer.cpp:207:40: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::vector >, float&}; _Tp = pdb_redo::PlanarityRestraint; _Alloc = std::allocator]’, inlined from ‘virtual void pdb_redo::Minimizer::addResidue(const cif::mm::residue&)’ at /<>/src/Minimizer.cpp:237:38: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {unsigned int&, unsigned int&, double&, double}; _Tp = pdb_redo::NonBondedContactRestraint; _Alloc = std::allocator]’, inlined from ‘pdb_redo::Minimizer::Finish()::’ at /<>/src/Minimizer.cpp:501:43: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object CMakeFiles/pdb-redo.dir/src/Restraints.cpp.o /usr/bin/arm-linux-gnueabihf-g++ -DBOOST_ALL_NO_LIB -DBOOST_REGEX_DYN_LINK -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -Dpdb_redo_EXPORTS -I/<>/include -I/<>/obj-arm-linux-gnueabihf -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++17 -fPIC -MD -MT CMakeFiles/pdb-redo.dir/src/Restraints.cpp.o -MF CMakeFiles/pdb-redo.dir/src/Restraints.cpp.o.d -o CMakeFiles/pdb-redo.dir/src/Restraints.cpp.o -c /<>/src/Restraints.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/13/vector:72, from /usr/include/cif++/forward_decl.hpp:32, from /usr/include/cif++/category.hpp:29, from /usr/include/cif++/datablock.hpp:29, from /usr/include/cif++/file.hpp:32, from /usr/include/cif++.hpp:30, from /<>/src/Restraints.cpp:34: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:529:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 529 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void clipper::Array2d::resize(const int&, const int&, const T&) [with T = double]’ at /usr/include/clipper/core/clipper_types.h:379:40, inlined from ‘clipper::Matrix::Matrix(const int&, const int&, T) [with T = double]’ at /usr/include/clipper/core/clipper_types.h:406:27, inlined from ‘std::vector clipper::Matrix::eigen(bool) [with T = double]’ at /usr/include/clipper/core/clipper_types.h:614:10: /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_vector.h:1034:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [100%] Linking CXX shared library libpdb-redo.so /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb-redo.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -fPIC -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libpdb-redo.so.3 -o libpdb-redo.so.3.0.5 "CMakeFiles/pdb-redo.dir/src/AtomShape.cpp.o" "CMakeFiles/pdb-redo.dir/src/BondMap.cpp.o" "CMakeFiles/pdb-redo.dir/src/ClipperWrapper.cpp.o" "CMakeFiles/pdb-redo.dir/src/Compound.cpp.o" "CMakeFiles/pdb-redo.dir/src/DistanceMap.cpp.o" "CMakeFiles/pdb-redo.dir/src/MapMaker.cpp.o" "CMakeFiles/pdb-redo.dir/src/Ramachandran.cpp.o" "CMakeFiles/pdb-redo.dir/src/ResolutionCalculator.cpp.o" "CMakeFiles/pdb-redo.dir/src/SkipList.cpp.o" "CMakeFiles/pdb-redo.dir/src/Statistics.cpp.o" "CMakeFiles/pdb-redo.dir/src/Symmetry-2.cpp.o" "CMakeFiles/pdb-redo.dir/src/Minimizer.cpp.o" "CMakeFiles/pdb-redo.dir/src/Restraints.cpp.o" /usr/lib/arm-linux-gnueabihf/libcifpp.so.5.0.7.1 /usr/lib/arm-linux-gnueabihf/libnewuoa.so.0.1.2 /usr/lib/arm-linux-gnueabihf/libclipper-ccp4.so /usr/lib/arm-linux-gnueabihf/libclipper-contrib.so /usr/lib/arm-linux-gnueabihf/libclipper-core.so /usr/lib/arm-linux-gnueabihf/libccp4c.so /usr/lib/arm-linux-gnueabihf/libgsl.so /usr/lib/arm-linux-gnueabihf/libgslcblas.so /usr/lib/arm-linux-gnueabihf/libz.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so.1.74.0 /usr/bin/cmake -E cmake_symlink_library libpdb-redo.so.3.0.5 libpdb-redo.so.3 libpdb-redo.so make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [100%] Built target pdb-redo make[2]: Leaving directory '/<>/obj-arm-linux-gnueabihf' /usr/bin/cmake -E cmake_progress_start /<>/obj-arm-linux-gnueabihf/CMakeFiles 0 make[1]: Leaving directory '/<>/obj-arm-linux-gnueabihf' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install -a cd obj-arm-linux-gnueabihf && make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/<> -B/<>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/obj-arm-linux-gnueabihf' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/obj-arm-linux-gnueabihf' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libpdb-redo.so.3.0.5 -- Installing: /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libpdb-redo.so.3 -- Installing: /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libpdb-redo.so -- Installing: /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/pdb-redo/pdb-redoTargets.cmake -- Installing: /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/pdb-redo/pdb-redoTargets-none.cmake -- Installing: /<>/debian/tmp/usr/include/pdb-redo -- Installing: /<>/debian/tmp/usr/include/pdb-redo/Symmetry-2.hpp -- Installing: /<>/debian/tmp/usr/include/pdb-redo/Statistics.hpp -- Installing: /<>/debian/tmp/usr/include/pdb-redo/SkipList.hpp -- Installing: /<>/debian/tmp/usr/include/pdb-redo/Restraints.hpp -- Installing: /<>/debian/tmp/usr/include/pdb-redo/ResolutionCalculator.hpp -- Installing: /<>/debian/tmp/usr/include/pdb-redo/Ramachandran.hpp -- Installing: /<>/debian/tmp/usr/include/pdb-redo/Minimizer.hpp -- Installing: /<>/debian/tmp/usr/include/pdb-redo/MapMaker.hpp -- Installing: /<>/debian/tmp/usr/include/pdb-redo/DistanceMap.hpp -- Installing: /<>/debian/tmp/usr/include/pdb-redo/Compound.hpp -- Installing: /<>/debian/tmp/usr/include/pdb-redo/ClipperWrapper.hpp -- Installing: /<>/debian/tmp/usr/include/pdb-redo/BondMap.hpp -- Installing: /<>/debian/tmp/usr/include/pdb-redo/AtomShape.hpp -- Installing: /<>/debian/tmp/usr/include/pdb-redo/exports.hpp -- Installing: /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/pdb-redo/pdb-redoConfig.cmake -- Installing: /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/pdb-redo/pdb-redoConfigVersion.cmake -- Installing: /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig/libpdb-redo.pc make[1]: Leaving directory '/<>/obj-arm-linux-gnueabihf' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libpdb-redo3/usr/lib/arm-linux-gnueabihf/libpdb-redo.so.3.0.5 found in none of the libraries dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'libpdb-redo-dev' in '../libpdb-redo-dev_3.0.5-2_armhf.deb'. dpkg-deb: building package 'libpdb-redo3' in '../libpdb-redo3_3.0.5-2_armhf.deb'. dpkg-deb: building package 'libpdb-redo3-dbgsym' in '../libpdb-redo3-dbgsym_3.0.5-2_armhf.deb'. dpkg-genbuildinfo --build=any -O../libpdb-redo_3.0.5-2_armhf.buildinfo dpkg-genchanges --build=any -O../libpdb-redo_3.0.5-2_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2023-09-26T01:01:11Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libpdb-redo_3.0.5-2_armhf.changes: ---------------------------------- Format: 1.8 Date: Fri, 03 Feb 2023 09:22:45 +0100 Source: libpdb-redo Binary: libpdb-redo-dev libpdb-redo3 libpdb-redo3-dbgsym Built-For-Profiles: cross nocheck Architecture: armhf Version: 3.0.5-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Maarten L. Hekkelman Description: libpdb-redo-dev - Development files for libpdb-redo libpdb-redo3 - Library file for libpdb-redo Changes: libpdb-redo (3.0.5-2) unstable; urgency=medium . * Fix libcifpp dependency. Checksums-Sha1: 17a898437a802a14a332991a499778f13a14bd05 628108 libpdb-redo-dev_3.0.5-2_armhf.deb 3f56f0d0b26b0b1f0831d2a3128590615f10b45c 7173668 libpdb-redo3-dbgsym_3.0.5-2_armhf.deb 63d493b95b5f0fbad8a8fb9f9a1fa639c88e3162 288216 libpdb-redo3_3.0.5-2_armhf.deb e2c167274d8bae241770037308083937c103f0b8 7974 libpdb-redo_3.0.5-2_armhf.buildinfo Checksums-Sha256: 9c740112ee72c422b24558e15cef08df9d3e5477cffa960a8b325c53c9382264 628108 libpdb-redo-dev_3.0.5-2_armhf.deb f672b93bc18afe3ee70df3df274728ab46667850ee1fc09460dd798a7e3418d5 7173668 libpdb-redo3-dbgsym_3.0.5-2_armhf.deb 701c7f3cacc7e361246c0d31eaaced8fad8c949a410ec0687144147d9ab2456b 288216 libpdb-redo3_3.0.5-2_armhf.deb a91c02b9c6167b86d427f28bddccabc7cb543bdf4f6900162c5aa0322beacde9 7974 libpdb-redo_3.0.5-2_armhf.buildinfo Files: fe15b6c8669ad0558ed1c576171c563c 628108 libdevel optional libpdb-redo-dev_3.0.5-2_armhf.deb da90daaa16b45b4e02c383170696d569 7173668 debug optional libpdb-redo3-dbgsym_3.0.5-2_armhf.deb efe63b606a52aa303c715352a92cf323 288216 libs optional libpdb-redo3_3.0.5-2_armhf.deb 34439c503919479f0707a67756856fcb 7974 libs optional libpdb-redo_3.0.5-2_armhf.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: libpdb-redo Binary: libpdb-redo-dev libpdb-redo3 libpdb-redo3-dbgsym Architecture: armhf Version: 3.0.5-2 Checksums-Md5: fe15b6c8669ad0558ed1c576171c563c 628108 libpdb-redo-dev_3.0.5-2_armhf.deb da90daaa16b45b4e02c383170696d569 7173668 libpdb-redo3-dbgsym_3.0.5-2_armhf.deb efe63b606a52aa303c715352a92cf323 288216 libpdb-redo3_3.0.5-2_armhf.deb Checksums-Sha1: 17a898437a802a14a332991a499778f13a14bd05 628108 libpdb-redo-dev_3.0.5-2_armhf.deb 3f56f0d0b26b0b1f0831d2a3128590615f10b45c 7173668 libpdb-redo3-dbgsym_3.0.5-2_armhf.deb 63d493b95b5f0fbad8a8fb9f9a1fa639c88e3162 288216 libpdb-redo3_3.0.5-2_armhf.deb Checksums-Sha256: 9c740112ee72c422b24558e15cef08df9d3e5477cffa960a8b325c53c9382264 628108 libpdb-redo-dev_3.0.5-2_armhf.deb f672b93bc18afe3ee70df3df274728ab46667850ee1fc09460dd798a7e3418d5 7173668 libpdb-redo3-dbgsym_3.0.5-2_armhf.deb 701c7f3cacc7e361246c0d31eaaced8fad8c949a410ec0687144147d9ab2456b 288216 libpdb-redo3_3.0.5-2_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Tue, 26 Sep 2023 01:01:11 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: adduser (= 3.137), autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-13), autotools-dev (= 20220109.1), base-files (= 13), base-passwd (= 3.6.1), bash (= 5.2.15-2+b5), binutils (= 2.41-5), binutils-common (= 2.41-5), binutils-x86-64-linux-gnu (= 2.41-5), bsdextrautils (= 2.39.2-1), bsdutils (= 1:2.39.2-1), build-essential (= 12.10), bzip2 (= 1.0.8-5+b1), cmake (= 3.27.6-1), cmake-data (= 3.27.6-1), coreutils (= 9.1-1), cpp (= 4:13.2.0-1), cpp-11 (= 11.4.0-4), cpp-13 (= 13.2.0-4), dash (= 0.5.12-6), debconf (= 1.5.82), debhelper (= 13.11.6), debianutils (= 5.13), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.8-4), dpkg (= 1.22.0), dpkg-dev (= 1.22.0), dwz (= 0.15-1), fftw-dev (= 2.1.5-6), fftw2 (= 2.1.5-6), file (= 1:5.45-2), findutils (= 4.9.0-5), g++ (= 4:13.2.0-1), g++-13 (= 13.2.0-4), gcc (= 4:13.2.0-1), gcc-11 (= 11.4.0-4), gcc-11-base (= 11.4.0-4), gcc-13 (= 13.2.0-4), gcc-13-base (= 13.2.0-4), gettext (= 0.21-13+b1), gettext-base (= 0.21-13+b1), grep (= 3.11-3), groff-base (= 1.23.0-2), gzip (= 1.12-1), hostname (= 3.23+nmu1), icu-devtools (= 72.1-3), init-system-helpers (= 1.65.2), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.1-3), libarchive-zip-perl (= 1.68-1), libarchive13 (= 3.6.2-1), libasan6 (= 11.4.0-4), libasan8 (= 13.2.0-4), libatomic1 (= 13.2.0-4), libattr1 (= 1:2.5.1-4), libaudit-common (= 1:3.1.1-1), libaudit1 (= 1:3.1.1-1), libbinutils (= 2.41-5), libblkid1 (= 2.39.2-1), libboost-dev (= 1.74.0.3), libboost-regex-dev (= 1.74.0.3), libboost-regex1.74-dev (= 1.74.0+ds1-22), libboost-regex1.74.0 (= 1.74.0+ds1-22), libboost1.74-dev (= 1.74.0+ds1-22), libbrotli1 (= 1.0.9-2+b6), libbsd0 (= 0.11.7-4), libbz2-1.0 (= 1.0.8-5+b1), libc-bin (= 2.37-10), libc-dev-bin (= 2.37-10), libc6 (= 2.37-10), libc6-dev (= 2.37-10), libcap-ng0 (= 0.8.3-1+b3), libcap2 (= 1:2.66-4), libcc1-0 (= 13.2.0-4), libccp4-data (= 8.0.0-2), libccp4-dev (= 8.0.0-2), libccp4c0 (= 8.0.0-2), libccp4f0 (= 8.0.0-2), libcifpp-data (= 5.0.7.1-3), libcifpp-dev (= 5.0.7.1-3), libcifpp5 (= 5.0.7.1-3), libclipper-dev (= 2.1.20201109-2), libclipper2 (= 2.1.20201109-2), libcom-err2 (= 1.47.0-2+b1), libcrypt-dev (= 1:4.4.36-2), libcrypt1 (= 1:4.4.36-2), libctf-nobfd0 (= 2.41-5), libctf0 (= 2.41-5), libcurl4 (= 8.3.0-1), libdb5.3 (= 5.3.28+dfsg2-2), libdebconfclient0 (= 0.271), libdebhelper-perl (= 13.11.6), libdpkg-perl (= 1.22.0), libelf1 (= 0.189-4), libevent-core-2.1-7 (= 2.1.12-stable-8), libevent-pthreads-2.1-7 (= 2.1.12-stable-8), libexpat1 (= 2.5.0-2), libfabric1 (= 1.17.0-3), libffi8 (= 3.4.4-1), libfile-find-rule-perl (= 0.34-3), libfile-stripnondeterminism-perl (= 1.13.1-1), libgcc-11-dev (= 11.4.0-4), libgcc-13-dev (= 13.2.0-4), libgcc-s1 (= 13.2.0-4), libgcrypt20 (= 1.10.2-3), libgdbm-compat4 (= 1.23-3), libgdbm6 (= 1.23-3), libgfortran5 (= 13.2.0-4), libgmp10 (= 2:6.3.0+dfsg-2), libgnutls30 (= 3.8.1-4+b1), libgomp1 (= 13.2.0-4), libgpg-error0 (= 1.47-2), libgprofng0 (= 2.41-5), libgsl-dev (= 2.7.1+dfsg-5), libgsl27 (= 2.7.1+dfsg-5), libgslcblas0 (= 2.7.1+dfsg-5), libgssapi-krb5-2 (= 1.20.1-4), libhogweed6 (= 3.9.1-2), libhwasan0 (= 13.2.0-4), libhwloc-plugins (= 2.9.3-1), libhwloc15 (= 2.9.3-1), libibverbs1 (= 47.0-1), libicu-dev (= 72.1-3), libicu72 (= 72.1-3), libidn2-0 (= 2.3.4-1+b1), libisl23 (= 0.26-3), libitm1 (= 13.2.0-4), libjansson4 (= 2.14-2), libjsoncpp25 (= 1.9.5-6), libk5crypto3 (= 1.20.1-4), libkeyutils1 (= 1.6.3-2), libkrb5-3 (= 1.20.1-4), libkrb5support0 (= 1.20.1-4), libldap-2.5-0 (= 2.5.13+dfsg-5), liblsan0 (= 13.2.0-4), liblz4-1 (= 1.9.4-1), liblzma5 (= 5.4.4-0.1), libmagic-mgc (= 1:5.45-2), libmagic1 (= 1:5.45-2), libmd0 (= 1.1.0-1), libmmdb2-0 (= 2.0.22-1), libmmdb2-dev (= 2.0.22-1), libmount1 (= 2.39.2-1), libmpc3 (= 1.3.1-1), libmpfr6 (= 4.2.1-1), libmunge2 (= 0.5.15-2), libncursesw6 (= 6.4+20230625-2), libnettle8 (= 3.9.1-2), libnewuoa-dev (= 0.1.2-1), libnewuoa0 (= 0.1.2-1), libnghttp2-14 (= 1.56.0-1), libnl-3-200 (= 3.7.0-0.2+b1), libnl-route-3-200 (= 3.7.0-0.2+b1), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libnumber-compare-perl (= 0.03-3), libopenmpi3 (= 4.1.5-3), libp11-kit0 (= 0.25.0-4), libpam-modules (= 1.5.2-7), libpam-modules-bin (= 1.5.2-7), libpam-runtime (= 1.5.2-7), libpam0g (= 1.5.2-7), libpciaccess0 (= 0.17-2), libpcre2-8-0 (= 10.42-4), libperl5.36 (= 5.36.0-9), libpipeline1 (= 1.5.7-1), libpkgconf3 (= 1.8.1-1), libpmix2 (= 5.0.1-2), libproc2-0 (= 2:4.0.3-1), libpsl5 (= 0.21.2-1+b1), libquadmath0 (= 13.2.0-4), librdmacm1 (= 47.0-1), librhash0 (= 1.4.3-3), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2), libsasl2-2 (= 2.1.28+dfsg1-3), libsasl2-modules-db (= 2.1.28+dfsg1-3), libseccomp2 (= 2.5.4-1+b3), libselinux1 (= 3.5-1), libsemanage-common (= 3.5-1), libsemanage2 (= 3.5-1), libsepol2 (= 3.5-1), libsframe1 (= 2.41-5), libsmartcols1 (= 2.39.2-1), libssh2-1 (= 1.11.0-2), libssl3 (= 3.0.11-1), libstdc++-13-dev (= 13.2.0-4), libstdc++6 (= 13.2.0-4), libsub-override-perl (= 0.09-4), libsystemd0 (= 254.4-1), libtasn1-6 (= 4.19.0-3), libtext-glob-perl (= 0.11-3), libtinfo6 (= 6.4+20230625-2), libtirpc-common (= 1.3.3+ds-1), libtirpc-dev (= 1.3.3+ds-1), libtirpc3 (= 1.3.3+ds-1), libtool (= 2.4.7-7), libtsan0 (= 11.4.0-4), libtsan2 (= 13.2.0-4), libubsan1 (= 13.2.0-4), libuchardet0 (= 0.0.7-1), libudev1 (= 254.4-1), libunistring5 (= 1.1-2), libuuid1 (= 2.39.2-1), libuv1 (= 1.44.2-1), libx11-6 (= 2:1.8.6-1), libx11-data (= 2:1.8.6-1), libxau6 (= 1:1.0.9-1), libxcb1 (= 1.15-1), libxdmcp6 (= 1:1.1.2-3), libxext6 (= 2:1.3.4-1+b1), libxml2 (= 2.9.14+dfsg-1.3), libxnvctrl0 (= 525.125.06-1), libzstd1 (= 1.5.5+dfsg2-2), linux-libc-dev (= 6.5.3-1), login (= 1:4.13+dfsg1-1+b1), m4 (= 1.4.19-4), make (= 4.3-4.1), man-db (= 2.12.0-1), mawk (= 1.3.4.20230808-1), ncurses-base (= 6.4+20230625-2), ncurses-bin (= 6.4+20230625-2), ocl-icd-libopencl1 (= 2.3.2-1), passwd (= 1:4.13+dfsg1-1+b1), patch (= 2.7.6-7), perl (= 5.36.0-9), perl-base (= 5.36.0-9), perl-modules-5.36 (= 5.36.0-9), pkg-config (= 1.8.1-1), pkgconf (= 1.8.1-1), pkgconf-bin (= 1.8.1-1), po-debconf (= 1.0.21+nmu1), procps (= 2:4.0.3-1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-1), sensible-utils (= 0.0.20), sfftw-dev (= 2.1.5-6), sfftw2 (= 2.1.5-6), sysvinit-utils (= 3.08-1), tar (= 1.34+dfsg-1.2), usrmerge (= 37), util-linux (= 2.39.2-1), xz-utils (= 5.4.4-0.1), zlib1g (= 1:1.2.13.dfsg-3), zlib1g-dev (= 1:1.2.13.dfsg-3) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1675412565" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libpdb-redo-dev_3.0.5-2_armhf.deb --------------------------------- new Debian package, version 2.0. size 628108 bytes: control archive=1440 bytes. 627 bytes, 16 lines control 1970 bytes, 25 lines md5sums Package: libpdb-redo-dev Source: libpdb-redo Version: 3.0.5-2 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 1073 Depends: libpdb-redo3 (= 3.0.5-2), libboost-regex-dev, libnewuoa-dev, libclipper-dev, zlib1g-dev, libgsl-dev, libcifpp-dev Section: libdevel Priority: optional Homepage: https://github.com/PDB-REDO/libpdb-redo Description: Development files for libpdb-redo This library contains shared code for the various programs in the project PDB-REDO. . This specific package contains all files needed to develop new software using libpdb-redo. drwxr-xr-x root/root 0 2023-02-03 08:22 ./ drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/ drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/include/ drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/include/pdb-redo/ -rw-r--r-- root/root 2344 2023-01-25 13:55 ./usr/include/pdb-redo/AtomShape.hpp -rw-r--r-- root/root 3457 2023-01-25 13:55 ./usr/include/pdb-redo/BondMap.hpp -rw-r--r-- root/root 2298 2023-01-25 13:55 ./usr/include/pdb-redo/ClipperWrapper.hpp -rw-r--r-- root/root 10211 2023-01-25 13:55 ./usr/include/pdb-redo/Compound.hpp -rw-r--r-- root/root 3072 2023-01-25 13:55 ./usr/include/pdb-redo/DistanceMap.hpp -rw-r--r-- root/root 6212 2023-01-25 13:55 ./usr/include/pdb-redo/MapMaker.hpp -rw-r--r-- root/root 5981 2023-01-25 13:55 ./usr/include/pdb-redo/Minimizer.hpp -rw-r--r-- root/root 1814 2023-01-25 13:55 ./usr/include/pdb-redo/Ramachandran.hpp -rw-r--r-- root/root 2043 2023-01-25 13:55 ./usr/include/pdb-redo/ResolutionCalculator.hpp -rw-r--r-- root/root 5988 2023-01-25 13:55 ./usr/include/pdb-redo/Restraints.hpp -rw-r--r-- root/root 4554 2023-01-25 13:55 ./usr/include/pdb-redo/SkipList.hpp -rw-r--r-- root/root 5344 2023-01-25 13:55 ./usr/include/pdb-redo/Statistics.hpp -rw-r--r-- root/root 6271 2023-01-25 13:55 ./usr/include/pdb-redo/Symmetry-2.hpp -rw-r--r-- root/root 1055 2023-02-03 08:22 ./usr/include/pdb-redo/exports.hpp drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/lib/ drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/lib/arm-linux-gnueabihf/ drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/lib/arm-linux-gnueabihf/cmake/ drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/lib/arm-linux-gnueabihf/cmake/pdb-redo/ -rw-r--r-- root/root 1773 2023-02-03 08:22 ./usr/lib/arm-linux-gnueabihf/cmake/pdb-redo/pdb-redoConfig.cmake -rw-r--r-- root/root 1861 2023-02-03 08:22 ./usr/lib/arm-linux-gnueabihf/cmake/pdb-redo/pdb-redoConfigVersion.cmake -rw-r--r-- root/root 901 2023-02-03 08:22 ./usr/lib/arm-linux-gnueabihf/cmake/pdb-redo/pdb-redoTargets-none.cmake -rw-r--r-- root/root 4976 2023-02-03 08:22 ./usr/lib/arm-linux-gnueabihf/cmake/pdb-redo/pdb-redoTargets.cmake lrwxrwxrwx root/root 0 2023-02-03 08:22 ./usr/lib/arm-linux-gnueabihf/libpdb-redo.so -> libpdb-redo.so.3 drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/lib/arm-linux-gnueabihf/pkgconfig/ -rw-r--r-- root/root 303 2023-02-03 08:22 ./usr/lib/arm-linux-gnueabihf/pkgconfig/libpdb-redo.pc drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/share/ drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/share/doc/ drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/share/doc/libpdb-redo-dev/ -rw-r--r-- root/root 828 2023-02-03 08:22 ./usr/share/doc/libpdb-redo-dev/changelog.Debian.gz -rw-r--r-- root/root 519 2023-01-25 13:55 ./usr/share/doc/libpdb-redo-dev/changelog.gz -rw-r--r-- root/root 3497 2022-02-03 10:28 ./usr/share/doc/libpdb-redo-dev/copyright drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/share/doc/libpdb-redo-dev/examples/ -rw-r--r-- root/root 993520 2023-01-25 13:55 ./usr/share/doc/libpdb-redo-dev/examples/1cbs_map.mtz -rw-r--r-- root/root 2356 2023-01-25 13:55 ./usr/share/doc/libpdb-redo-dev/examples/CMakeLists.txt -rw-r--r-- root/root 994 2023-01-25 13:55 ./usr/share/doc/libpdb-redo-dev/examples/example.cpp libpdb-redo3-dbgsym_3.0.5-2_armhf.deb ------------------------------------- new Debian package, version 2.0. size 7173668 bytes: control archive=544 bytes. 390 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: libpdb-redo3-dbgsym Source: libpdb-redo Version: 3.0.5-2 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 7197 Depends: libpdb-redo3 (= 3.0.5-2) Section: debug Priority: optional Description: debug symbols for libpdb-redo3 Build-Ids: c1d094c7cc1ea0c209643e69b279d8997d110ac6 drwxr-xr-x root/root 0 2023-02-03 08:22 ./ drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/ drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/lib/ drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/lib/debug/ drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/lib/debug/.build-id/c1/ -rw-r--r-- root/root 7358540 2023-02-03 08:22 ./usr/lib/debug/.build-id/c1/d094c7cc1ea0c209643e69b279d8997d110ac6.debug drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/share/ drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/share/doc/ lrwxrwxrwx root/root 0 2023-02-03 08:22 ./usr/share/doc/libpdb-redo3-dbgsym -> libpdb-redo3 libpdb-redo3_3.0.5-2_armhf.deb ------------------------------ new Debian package, version 2.0. size 288216 bytes: control archive=888 bytes. 644 bytes, 15 lines control 309 bytes, 4 lines md5sums 38 bytes, 1 lines shlibs 68 bytes, 2 lines triggers Package: libpdb-redo3 Source: libpdb-redo Version: 3.0.5-2 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 671 Depends: libc6 (>= 2.34), libcifpp5 (>= 5.0.7.1), libclipper2 (>= 2.1.20201109), libgcc-s1 (>= 3.5), libgsl27 (>= 2.7.1), libnewuoa0 (>= 0.1.2), libstdc++6 (>= 13.1), zlib1g (>= 1:1.2.2) Section: libs Priority: optional Homepage: https://github.com/PDB-REDO/libpdb-redo Description: Library file for libpdb-redo This library contains shared code for the various programs in the project PDB-REDO. . This package contains the shared library for libpdb-redo. drwxr-xr-x root/root 0 2023-02-03 08:22 ./ drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/ drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/lib/ drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/lib/arm-linux-gnueabihf/ lrwxrwxrwx root/root 0 2023-02-03 08:22 ./usr/lib/arm-linux-gnueabihf/libpdb-redo.so.3 -> libpdb-redo.so.3.0.5 -rw-r--r-- root/root 669604 2023-02-03 08:22 ./usr/lib/arm-linux-gnueabihf/libpdb-redo.so.3.0.5 drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/share/ drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/share/doc/ drwxr-xr-x root/root 0 2023-02-03 08:22 ./usr/share/doc/libpdb-redo3/ -rw-r--r-- root/root 828 2023-02-03 08:22 ./usr/share/doc/libpdb-redo3/changelog.Debian.gz -rw-r--r-- root/root 519 2023-01-25 13:55 ./usr/share/doc/libpdb-redo3/changelog.gz -rw-r--r-- root/root 3497 2022-02-03 10:28 ./usr/share/doc/libpdb-redo3/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1466 B] Get:5 copy:/<>/apt_archive ./ Packages [1545 B] Fetched 3626 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl libio-compress-brotli-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:armhf t1utils unzip 0 upgraded, 126 newly installed, 0 to remove and 0 not upgraded. Need to get 13.8 MB of archives. After this operation, 51.4 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://localhost:3142/debian sid/main amd64 netbase all 6.4 [12.8 kB] Get:3 http://localhost:3142/debian sid/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get:4 http://localhost:3142/debian sid/main amd64 openssl amd64 3.0.11-1 [1416 kB] Get:5 http://localhost:3142/debian sid/main amd64 ca-certificates all 20230311 [153 kB] Get:6 http://localhost:3142/debian sid/main amd64 diffstat amd64 1.65-1 [33.3 kB] Get:7 http://localhost:3142/debian sid/main amd64 libassuan0 amd64 2.5.6-1 [49.9 kB] Get:8 http://localhost:3142/debian sid/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get:9 http://localhost:3142/debian sid/main amd64 gpgconf amd64 2.2.40-1.1 [564 kB] Get:10 http://localhost:3142/debian sid/main amd64 libsqlite3-0 amd64 3.43.1-1 [872 kB] Get:11 http://localhost:3142/debian sid/main amd64 gpg amd64 2.2.40-1.1 [949 kB] Get:12 http://localhost:3142/debian sid/main amd64 iso-codes all 4.15.0-1 [2906 kB] Get:13 http://localhost:3142/debian sid/main amd64 libaliased-perl all 0.34-3 [13.5 kB] Get:14 http://localhost:3142/debian sid/main amd64 libapt-pkg-perl amd64 0.1.40+b2 [69.2 kB] Get:15 http://localhost:3142/debian sid/main amd64 libb-hooks-op-check-perl amd64 0.22-2+b1 [10.5 kB] Get:16 http://localhost:3142/debian sid/main amd64 libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get:17 http://localhost:3142/debian sid/main amd64 libdevel-callchecker-perl amd64 0.008-2 [15.8 kB] Get:18 http://localhost:3142/debian sid/main amd64 libparams-classify-perl amd64 0.015-2+b1 [23.1 kB] Get:19 http://localhost:3142/debian sid/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:20 http://localhost:3142/debian sid/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:21 http://localhost:3142/debian sid/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:22 http://localhost:3142/debian sid/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:23 http://localhost:3142/debian sid/main amd64 libvariable-magic-perl amd64 0.63-1+b1 [44.0 kB] Get:24 http://localhost:3142/debian sid/main amd64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get:25 http://localhost:3142/debian sid/main amd64 libberkeleydb-perl amd64 0.64-2+b1 [123 kB] Get:26 http://localhost:3142/debian sid/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:27 http://localhost:3142/debian sid/main amd64 libhtml-tagset-perl all 3.20-6 [11.7 kB] Get:28 http://localhost:3142/debian sid/main amd64 liburi-perl all 5.21-1 [95.6 kB] Get:29 http://localhost:3142/debian sid/main amd64 libhtml-parser-perl amd64 3.81-1 [101 kB] Get:30 http://localhost:3142/debian sid/main amd64 libcgi-pm-perl all 4.57-1 [221 kB] Get:31 http://localhost:3142/debian sid/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:32 http://localhost:3142/debian sid/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:33 http://localhost:3142/debian sid/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b1 [36.4 kB] Get:34 http://localhost:3142/debian sid/main amd64 libclone-perl amd64 0.46-1 [13.7 kB] Get:35 http://localhost:3142/debian sid/main amd64 libconfig-tiny-perl all 2.29-1 [16.5 kB] Get:36 http://localhost:3142/debian sid/main amd64 libparams-util-perl amd64 1.102-2+b1 [24.8 kB] Get:37 http://localhost:3142/debian sid/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get:38 http://localhost:3142/debian sid/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:39 http://localhost:3142/debian sid/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:40 http://localhost:3142/debian sid/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:41 http://localhost:3142/debian sid/main amd64 libcpanel-json-xs-perl amd64 4.37-1 [131 kB] Get:42 http://localhost:3142/debian sid/main amd64 libdevel-stacktrace-perl all 2.0400-2 [26.8 kB] Get:43 http://localhost:3142/debian sid/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:44 http://localhost:3142/debian sid/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:45 http://localhost:3142/debian sid/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:46 http://localhost:3142/debian sid/main amd64 libdata-dpath-perl all 0.58-2 [43.6 kB] Get:47 http://localhost:3142/debian sid/main amd64 libdata-messagepack-perl amd64 1.02-1+b1 [35.2 kB] Get:48 http://localhost:3142/debian sid/main amd64 libnet-domain-tld-perl all 1.75-3 [31.9 kB] Get:49 http://localhost:3142/debian sid/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:50 http://localhost:3142/debian sid/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:51 http://localhost:3142/debian sid/main amd64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:52 http://localhost:3142/debian sid/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2+b1 [99.5 kB] Get:53 http://localhost:3142/debian sid/main amd64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:54 http://localhost:3142/debian sid/main amd64 libdata-validate-uri-perl all 0.07-2 [11.2 kB] Get:55 http://localhost:3142/debian sid/main amd64 libdevel-size-perl amd64 0.83-2+b1 [24.3 kB] Get:56 http://localhost:3142/debian sid/main amd64 libemail-address-xs-perl amd64 1.05-1+b1 [29.4 kB] Get:57 http://localhost:3142/debian sid/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:58 http://localhost:3142/debian sid/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:59 http://localhost:3142/debian sid/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:60 http://localhost:3142/debian sid/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:61 http://localhost:3142/debian sid/main amd64 libhttp-date-perl all 6.05-2 [10.5 kB] Get:62 http://localhost:3142/debian sid/main amd64 libfile-listing-perl all 6.15-1 [12.6 kB] Get:63 http://localhost:3142/debian sid/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:64 http://localhost:3142/debian sid/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:65 http://localhost:3142/debian sid/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:66 http://localhost:3142/debian sid/main amd64 libhttp-message-perl all 6.44-2 [81.8 kB] Get:67 http://localhost:3142/debian sid/main amd64 libhtml-form-perl all 6.11-1 [33.1 kB] Get:68 http://localhost:3142/debian sid/main amd64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:69 http://localhost:3142/debian sid/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:70 http://localhost:3142/debian sid/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:71 http://localhost:3142/debian sid/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:72 http://localhost:3142/debian sid/main amd64 perl-openssl-defaults amd64 7+b1 [7924 B] Get:73 http://localhost:3142/debian sid/main amd64 libnet-ssleay-perl amd64 1.92-2+b1 [317 kB] Get:74 http://localhost:3142/debian sid/main amd64 libio-socket-ssl-perl all 2.083-1 [218 kB] Get:75 http://localhost:3142/debian sid/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:76 http://localhost:3142/debian sid/main amd64 liblwp-protocol-https-perl all 6.11-1 [10.5 kB] Get:77 http://localhost:3142/debian sid/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:78 http://localhost:3142/debian sid/main amd64 libwww-perl all 6.72-1 [187 kB] Get:79 http://localhost:3142/debian sid/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:80 http://localhost:3142/debian sid/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:81 http://localhost:3142/debian sid/main amd64 libio-interactive-perl all 1.023-2 [11.0 kB] Get:82 http://localhost:3142/debian sid/main amd64 libipc-run3-perl all 0.048-3 [33.2 kB] Get:83 http://localhost:3142/debian sid/main amd64 libjson-maybexs-perl all 1.004005-1 [12.9 kB] Get:84 http://localhost:3142/debian sid/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:85 http://localhost:3142/debian sid/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:86 http://localhost:3142/debian sid/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:87 http://localhost:3142/debian sid/main amd64 liblz1 amd64 1.13-6 [37.8 kB] Get:88 http://localhost:3142/debian sid/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:89 http://localhost:3142/debian sid/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:90 http://localhost:3142/debian sid/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:91 http://localhost:3142/debian sid/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:92 http://localhost:3142/debian sid/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:93 http://localhost:3142/debian sid/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:94 http://localhost:3142/debian sid/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:95 http://localhost:3142/debian sid/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:96 http://localhost:3142/debian sid/main amd64 libmouse-perl amd64 2.5.10-1+b3 [170 kB] Get:97 http://localhost:3142/debian sid/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:98 http://localhost:3142/debian sid/main amd64 libsub-identify-perl amd64 0.14-3 [10.9 kB] Get:99 http://localhost:3142/debian sid/main amd64 libsub-name-perl amd64 0.27-1 [12.5 kB] Get:100 http://localhost:3142/debian sid/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:101 http://localhost:3142/debian sid/main amd64 libpath-tiny-perl all 0.144-1 [56.4 kB] Get:102 http://localhost:3142/debian sid/main amd64 libperlio-gzip-perl amd64 0.20-1+b1 [17.3 kB] Get:103 http://localhost:3142/debian sid/main amd64 libperlio-utf8-strict-perl amd64 0.010-1 [11.4 kB] Get:104 http://localhost:3142/debian sid/main amd64 libproc-processtable-perl amd64 0.636-1 [43.0 kB] Get:105 http://localhost:3142/debian sid/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:106 http://localhost:3142/debian sid/main amd64 libsereal-decoder-perl amd64 5.004+ds-1 [99.5 kB] Get:107 http://localhost:3142/debian sid/main amd64 libsereal-encoder-perl amd64 5.004+ds-1 [102 kB] Get:108 http://localhost:3142/debian sid/main amd64 libsort-versions-perl all 1.62-3 [8928 B] Get:109 http://localhost:3142/debian sid/main amd64 libxs-parse-keyword-perl amd64 0.38-1 [60.0 kB] Get:110 http://localhost:3142/debian sid/main amd64 libsyntax-keyword-try-perl amd64 0.29-1 [28.8 kB] Get:111 http://localhost:3142/debian sid/main amd64 libterm-readkey-perl amd64 2.38-2+b1 [24.5 kB] Get:112 http://localhost:3142/debian sid/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b1 [8404 B] Get:113 http://localhost:3142/debian sid/main amd64 libtext-markdown-discount-perl amd64 0.16-1 [13.0 kB] Get:114 http://localhost:3142/debian sid/main amd64 libtext-xslate-perl amd64 3.5.9-1+b2 [198 kB] Get:115 http://localhost:3142/debian sid/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:116 http://localhost:3142/debian sid/main amd64 libtime-moment-perl amd64 0.44-2+b1 [73.0 kB] Get:117 http://localhost:3142/debian sid/main amd64 libunicode-utf8-perl amd64 0.62-2 [20.2 kB] Get:118 http://localhost:3142/debian sid/main amd64 libwww-mechanize-perl all 2.17-1 [116 kB] Get:119 http://localhost:3142/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB] Get:120 http://localhost:3142/debian sid/main amd64 libyaml-libyaml-perl amd64 0.86+ds-1 [34.4 kB] Get:121 http://localhost:3142/debian sid/main amd64 plzip amd64 1.10-6 [63.1 kB] Get:122 http://localhost:3142/debian sid/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:123 http://localhost:3142/debian sid/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:124 http://localhost:3142/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:125 http://localhost:3142/debian sid/main amd64 unzip amd64 6.0-28 [166 kB] Get:126 http://localhost:3142/debian sid/main amd64 lintian all 2.116.3 [1130 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 13.8 MB in 0s (81.9 MB/s) Selecting previously unselected package netbase. (Reading database ... 41278 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.0.11-1_amd64.deb ... Unpacking openssl (3.0.11-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20230311_all.deb ... Unpacking ca-certificates (20230311) ... Selecting previously unselected package diffstat. Preparing to unpack .../004-diffstat_1.65-1_amd64.deb ... Unpacking diffstat (1.65-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../005-libassuan0_2.5.6-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.6-1) ... Selecting previously unselected package libreadline8:amd64. 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Unpacking libapt-pkg-perl (0.1.40+b2) ... Selecting previously unselected package libb-hooks-op-check-perl:amd64. Preparing to unpack .../013-libb-hooks-op-check-perl_0.22-2+b1_amd64.deb ... Unpacking libb-hooks-op-check-perl:amd64 (0.22-2+b1) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../014-libdynaloader-functions-perl_0.003-3_all.deb ... Unpacking libdynaloader-functions-perl (0.003-3) ... Selecting previously unselected package libdevel-callchecker-perl:amd64. Preparing to unpack .../015-libdevel-callchecker-perl_0.008-2_amd64.deb ... Unpacking libdevel-callchecker-perl:amd64 (0.008-2) ... Selecting previously unselected package libparams-classify-perl:amd64. Preparing to unpack .../016-libparams-classify-perl_0.015-2+b1_amd64.deb ... Unpacking libparams-classify-perl:amd64 (0.015-2+b1) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../017-libmodule-runtime-perl_0.016-2_all.deb ... Unpacking libmodule-runtime-perl (0.016-2) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../018-libtry-tiny-perl_0.31-2_all.deb ... Unpacking libtry-tiny-perl (0.31-2) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../019-libmodule-implementation-perl_0.09-2_all.deb ... Unpacking libmodule-implementation-perl (0.09-2) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../020-libsub-exporter-progressive-perl_0.001013-3_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-3) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../021-libvariable-magic-perl_0.63-1+b1_amd64.deb ... Unpacking libvariable-magic-perl (0.63-1+b1) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../022-libb-hooks-endofscope-perl_0.26-1_all.deb ... Unpacking libb-hooks-endofscope-perl (0.26-1) ... Selecting previously unselected package libberkeleydb-perl:amd64. Preparing to unpack .../023-libberkeleydb-perl_0.64-2+b1_amd64.deb ... Unpacking libberkeleydb-perl:amd64 (0.64-2+b1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../024-libcapture-tiny-perl_0.48-2_all.deb ... Unpacking libcapture-tiny-perl (0.48-2) ... Selecting previously unselected package libhtml-tagset-perl. Preparing to unpack .../025-libhtml-tagset-perl_3.20-6_all.deb ... Unpacking libhtml-tagset-perl (3.20-6) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../026-liburi-perl_5.21-1_all.deb ... Unpacking liburi-perl (5.21-1) ... Selecting previously unselected package libhtml-parser-perl:amd64. Preparing to unpack .../027-libhtml-parser-perl_3.81-1_amd64.deb ... Unpacking libhtml-parser-perl:amd64 (3.81-1) ... Selecting previously unselected package libcgi-pm-perl. 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Unpacking libconfig-tiny-perl (2.29-1) ... Selecting previously unselected package libparams-util-perl. Preparing to unpack .../034-libparams-util-perl_1.102-2+b1_amd64.deb ... Unpacking libparams-util-perl (1.102-2+b1) ... Selecting previously unselected package libsub-install-perl. Preparing to unpack .../035-libsub-install-perl_0.929-1_all.deb ... Unpacking libsub-install-perl (0.929-1) ... Selecting previously unselected package libdata-optlist-perl. Preparing to unpack .../036-libdata-optlist-perl_0.114-1_all.deb ... Unpacking libdata-optlist-perl (0.114-1) ... Selecting previously unselected package libsub-exporter-perl. Preparing to unpack .../037-libsub-exporter-perl_0.990-1_all.deb ... Unpacking libsub-exporter-perl (0.990-1) ... Selecting previously unselected package libconst-fast-perl. Preparing to unpack .../038-libconst-fast-perl_0.014-2_all.deb ... Unpacking libconst-fast-perl (0.014-2) ... Selecting previously unselected package libcpanel-json-xs-perl:amd64. Preparing to unpack .../039-libcpanel-json-xs-perl_4.37-1_amd64.deb ... Unpacking libcpanel-json-xs-perl:amd64 (4.37-1) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../040-libdevel-stacktrace-perl_2.0400-2_all.deb ... Unpacking libdevel-stacktrace-perl (2.0400-2) ... Selecting previously unselected package libexception-class-perl. Preparing to unpack .../041-libexception-class-perl_1.45-1_all.deb ... Unpacking libexception-class-perl (1.45-1) ... Selecting previously unselected package libiterator-perl. Preparing to unpack .../042-libiterator-perl_0.03+ds1-2_all.deb ... Unpacking libiterator-perl (0.03+ds1-2) ... Selecting previously unselected package libiterator-util-perl. Preparing to unpack .../043-libiterator-util-perl_0.02+ds1-2_all.deb ... Unpacking libiterator-util-perl (0.02+ds1-2) ... Selecting previously unselected package libdata-dpath-perl. Preparing to unpack .../044-libdata-dpath-perl_0.58-2_all.deb ... Unpacking libdata-dpath-perl (0.58-2) ... Selecting previously unselected package libdata-messagepack-perl. Preparing to unpack .../045-libdata-messagepack-perl_1.02-1+b1_amd64.deb ... Unpacking libdata-messagepack-perl (1.02-1+b1) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../046-libnet-domain-tld-perl_1.75-3_all.deb ... Unpacking libnet-domain-tld-perl (1.75-3) ... Selecting previously unselected package libdata-validate-domain-perl. Preparing to unpack .../047-libdata-validate-domain-perl_0.10-1.1_all.deb ... Unpacking libdata-validate-domain-perl (0.10-1.1) ... Selecting previously unselected package libnet-ipv6addr-perl. Preparing to unpack .../048-libnet-ipv6addr-perl_1.02-1_all.deb ... Unpacking libnet-ipv6addr-perl (1.02-1) ... Selecting previously unselected package libnet-netmask-perl. Preparing to unpack .../049-libnet-netmask-perl_2.0002-2_all.deb ... Unpacking libnet-netmask-perl (2.0002-2) ... 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Setting up plzip (1.10-6) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-2) ... Setting up libmouse-perl (2.5.10-1+b3) ... Setting up libdata-messagepack-perl (1.02-1+b1) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:amd64 (0.46-1) ... Setting up libyaml-0-2:amd64 (0.2.5-1) ... Setting up libsub-identify-perl (0.14-3) ... Setting up libcpanel-json-xs-perl:amd64 (4.37-1) ... Setting up libhtml-tagset-perl (3.20-6) ... Setting up libdevel-size-perl (0.83-2+b1) ... Setting up unzip (6.0-28) ... Setting up libsqlite3-0:amd64 (3.43.1-1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.86+ds-1) ... Setting up libio-interactive-perl (1.023-2) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up perl-openssl-defaults:amd64 (7+b1) ... Setting up libmldbm-perl (2.05-4) ... Setting up liblzo2-2:amd64 (2.10-2) ... Setting up libtime-moment-perl (0.44-2+b1) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libassuan0:amd64 (2.5.6-1) ... Setting up libconfig-tiny-perl (2.29-1) ... Setting up libsereal-encoder-perl (5.004+ds-1) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up libnet-netmask-perl (2.0002-2) ... Setting up libsub-install-perl (0.929-1) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004005-1) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2+b1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libxs-parse-keyword-perl (0.38-1) ... Setting up libipc-system-simple-perl (1.30-2) ... Setting up libnet-domain-tld-perl (1.75-3) ... Setting up libperlio-utf8-strict-perl (0.010-1) ... Setting up t1utils (1.41-4) ... Setting up diffstat (1.65-1) ... Setting up libvariable-magic-perl (0.63-1+b1) ... Setting up libio-html-perl (1.004-3) ... Setting up libb-hooks-op-check-perl:amd64 (0.22-2+b1) ... Setting up libparams-util-perl (1.102-2+b1) ... Setting up libtime-duration-perl (1.21-2) ... Setting up libtext-xslate-perl:amd64 (3.5.9-1+b2) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up libcapture-tiny-perl (0.48-2) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libsub-name-perl:amd64 (0.27-1) ... Setting up libsyntax-keyword-try-perl (0.29-1) ... Setting up libdata-validate-domain-perl (0.10-1.1) ... Setting up libproc-processtable-perl:amd64 (0.636-1) ... Setting up libpath-tiny-perl (0.144-1) ... Setting up lzop (1.04-2) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libipc-run3-perl (0.048-3) ... Setting up libregexp-wildcards-perl (1.05-3) ... Setting up libaliased-perl (0.34-3) ... Setting up netbase (6.4) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006008-1) ... Setting up libdevel-stacktrace-perl (2.0400-2) ... Setting up libclass-xsaccessor-perl (1.19-4+b1) ... Setting up libsort-versions-perl (1.62-3) ... Setting up libterm-readkey-perl (2.38-2+b1) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.0.11-1) ... Setting up libtext-levenshteinxs-perl (0.03-5+b1) ... Setting up libperlio-gzip-perl (0.20-1+b1) ... Setting up readline-common (8.2-1.3) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.004+ds-1) ... Setting up libmarkdown2:amd64 (2.2.7-2) ... Setting up liburi-perl (5.21-1) ... Setting up iso-codes (4.15.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b1) ... Setting up libnet-ssleay-perl:amd64 (1.92-2+b1) ... Setting up libhttp-date-perl (6.05-2) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.15-1) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up libnet-http-perl (6.23-1) ... Setting up libtext-markdown-discount-perl (0.16-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:amd64 (0.008-2) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:amd64 (3.81-1) ... Setting up gpgconf (2.2.40-1.1) ... Setting up libio-socket-ssl-perl (2.083-1) ... Setting up gpg (2.2.40-1.1) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (6.44-2) ... Setting up libhtml-form-perl (6.11-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b1) ... Setting up libcgi-pm-perl (4.57-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.58-2) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.72-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.17-1) ... Setting up liblwp-protocol-https-perl (6.11-1) ... Setting up lintian (2.116.3) ... Setting up sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.37-10) ... Processing triggers for man-db (2.12.0-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 100004 Build-Time: 93 Distribution: unstable Foreign Architectures: armhf Host Architecture: armhf Install-Time: 18 Job: libpdb-redo_3.0.5-2 Lintian: pass Machine Architecture: amd64 Package: libpdb-redo Package-Time: 121 Source-Version: 3.0.5-2 Space: 100004 Status: successful Version: 3.0.5-2 -------------------------------------------------------------------------------- Finished at 2023-09-26T01:01:11Z Build needed 00:02:01, 100004k disk space