sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | libseqlib 1.1.2+dfsg-6 (armhf) Sat, 11 Jul 2020 05:15:58 +0000 | +==============================================================================+ Package: libseqlib Version: 1.1.2+dfsg-6 Source Version: 1.1.2+dfsg-6 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-47e75d3e-7b59-43c1-b39a-b890335e1e4d' with '<>' I: NOTICE: Log filtering will replace 'build/libseqlib-X1OVuj/resolver-XRgAed' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-07-10-0806.07.pdiff [5348 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-07-10-1403.51.pdiff [19.5 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-07-10-2004.10.pdiff [17.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main Sources 2020-07-11-0202.54.pdiff [10.1 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main Sources 2020-07-11-0202.54.pdiff [10.1 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-07-10-0806.07.pdiff [13.4 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-07-10-1403.51.pdiff [12.0 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-07-10-2004.10.pdiff [10.6 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-07-11-0202.54.pdiff [8114 B] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-07-11-0202.54.pdiff [8114 B] Get:12 http://debian.oregonstate.edu/debian unstable/main armhf Packages [8006 kB] Fetched 8305 kB in 2s (5302 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'libseqlib' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libseqlib.git Please use: git clone https://salsa.debian.org/med-team/libseqlib.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 173 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main libseqlib 1.1.2+dfsg-6 (dsc) [2192 B] Get:2 http://debian.oregonstate.edu/debian unstable/main libseqlib 1.1.2+dfsg-6 (tar) [157 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main libseqlib 1.1.2+dfsg-6 (diff) [13.8 kB] Fetched 173 kB in 0s (3287 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/libseqlib-X1OVuj/libseqlib-1.1.2+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/libseqlib-X1OVuj' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), d-shlibs, pkg-config, pkg-kde-tools, libhts-dev, libcurl4-openssl-dev | libcurl4-dev, zlib1g-dev, libfml-dev (>= 0.1-3), libbwa-dev (>= 0.7.15-3), libjsoncpp-dev, libssw-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf Filtered Build-Depends: debhelper-compat (= 12), d-shlibs, pkg-config, pkg-kde-tools, libhts-dev, libcurl4-openssl-dev, zlib1g-dev, libfml-dev (>= 0.1-3), libbwa-dev (>= 0.7.15-3), libjsoncpp-dev, libssw-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [482 B] Get:5 copy:/<>/apt_archive ./ Packages [565 B] Fetched 2004 B in 0s (76.1 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils build-essential cpp-9-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-9 g++-9-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-10-base:armhf gcc-10-cross-base gcc-9-arm-linux-gnueabihf gcc-9-arm-linux-gnueabihf-base gcc-9-base:armhf gcc-9-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libasan5-armhf-cross libatomic1:armhf libatomic1-armhf-cross libbrotli1:armhf libbwa-dev:armhf libbz2-1.0:armhf libc6:armhf libc6-armhf-cross libc6-dev libc6-dev:armhf libc6-dev-armhf-cross libcom-err2:armhf libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:armhf libcrypt1:armhf libcurl3-gnutls:armhf libcurl4:armhf libcurl4-openssl-dev:armhf libdb5.3:armhf libdebhelper-perl libdebian-dpkgcross-perl libdeflate0:armhf libdpkg-perl libelf1 libexpat1 libffi7:armhf libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfml-dev:armhf libfml0:armhf libgcc-9-dev:armhf libgcc-9-dev-armhf-cross libgcc-s1:armhf libgcc-s1-armhf-cross libgcrypt20:armhf libglib2.0-0 libgmp10:armhf libgnutls30:armhf libgomp1:armhf libgomp1-armhf-cross libgpg-error0:armhf libgssapi-krb5-2:armhf libhogweed5:armhf libhts-dev:armhf libhts3:armhf libicu67 libidn2-0:armhf libio-string-perl libjsoncpp-dev:armhf libjsoncpp1:armhf libk5crypto3:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5support0:armhf libldap-2.4-2:armhf libldap-common liblocale-gettext-perl liblzma-dev:armhf liblzma5:armhf libmagic-mgc libmagic1 libmpdec2 libnettle7:armhf libnghttp2-14:armhf libp11-kit0:armhf libperl5.30 libpipeline1 libpsl5:armhf libpython3-stdlib libpython3.8-minimal libpython3.8-stdlib libreadline8 librtmp1:armhf libsasl2-2:armhf libsasl2-modules-db:armhf libsigsegv2 libsqlite3-0 libssh2-1:armhf libssl1.1 libssl1.1:armhf libssw-dev:armhf libssw0:armhf libstdc++-9-dev libstdc++-9-dev:armhf libstdc++-9-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtasn1-6:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libunistring2:armhf libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db mime-support perl perl-modules-5.30 pkg-config pkg-kde-tools po-debconf python3 python3-minimal python3.8 python3.8-minimal readline-common sensible-utils ucf zlib1g:armhf zlib1g-dev:armhf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-9-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-9-multilib gcc-9-doc manpages-dev flex bison gdb-arm-linux-gnueabihf gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff samtools:armhf glibc-doc:armhf libc-l10n:armhf locales:armhf glibc-doc manpages-dev:armhf libcurl4-doc:armhf libidn11-dev:armhf libkrb5-dev:armhf libldap2-dev:armhf librtmp-dev:armhf libssh2-1-dev:armhf libssl-dev:armhf gnupg git bzr rng-tools:armhf gnutls-bin:armhf krb5-doc:armhf krb5-user:armhf liblzma-doc:armhf libstdc++-9-doc libstdc++-9-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl cdbs libmail-box-perl python3-doc python3-tk python3-venv python3.8-venv python3.8-doc binfmt-support readline-doc Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx ca-certificates:armhf libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpg-error-l10n:armhf krb5-locales:armhf publicsuffix:armhf libsasl2-modules:armhf libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils build-essential cpp-9-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-9 g++-9-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-10-base:armhf gcc-10-cross-base gcc-9-arm-linux-gnueabihf gcc-9-arm-linux-gnueabihf-base gcc-9-base:armhf gcc-9-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libasan5-armhf-cross libatomic1:armhf libatomic1-armhf-cross libbrotli1:armhf libbwa-dev:armhf libbz2-1.0:armhf libc6:armhf libc6-armhf-cross libc6-dev libc6-dev:armhf libc6-dev-armhf-cross libcom-err2:armhf libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:armhf libcrypt1:armhf libcurl3-gnutls:armhf libcurl4:armhf libcurl4-openssl-dev:armhf libdb5.3:armhf libdebhelper-perl libdebian-dpkgcross-perl libdeflate0:armhf libdpkg-perl libelf1 libexpat1 libffi7:armhf libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfml-dev:armhf libfml0:armhf libgcc-9-dev:armhf libgcc-9-dev-armhf-cross libgcc-s1:armhf libgcc-s1-armhf-cross libgcrypt20:armhf libglib2.0-0 libgmp10:armhf libgnutls30:armhf libgomp1:armhf libgomp1-armhf-cross libgpg-error0:armhf libgssapi-krb5-2:armhf libhogweed5:armhf libhts-dev:armhf libhts3:armhf libicu67 libidn2-0:armhf libio-string-perl libjsoncpp-dev:armhf libjsoncpp1:armhf libk5crypto3:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5support0:armhf libldap-2.4-2:armhf libldap-common liblocale-gettext-perl liblzma-dev:armhf liblzma5:armhf libmagic-mgc libmagic1 libmpdec2 libnettle7:armhf libnghttp2-14:armhf libp11-kit0:armhf libperl5.30 libpipeline1 libpsl5:armhf libpython3-stdlib libpython3.8-minimal libpython3.8-stdlib libreadline8 librtmp1:armhf libsasl2-2:armhf libsasl2-modules-db:armhf libsigsegv2 libsqlite3-0 libssh2-1:armhf libssl1.1 libssl1.1:armhf libssw-dev:armhf libssw0:armhf libstdc++-9-dev libstdc++-9-dev:armhf libstdc++-9-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtasn1-6:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libunistring2:armhf libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db mime-support perl perl-modules-5.30 pkg-config pkg-kde-tools po-debconf python3 python3-minimal python3.8 python3.8-minimal readline-common sbuild-build-depends-main-dummy:armhf sensible-utils ucf zlib1g:armhf zlib1g-dev:armhf 0 upgraded, 161 newly installed, 0 to remove and 0 not upgraded. Need to get 110 MB of archives. After this operation, 412 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [992 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.35.2-7 [139 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-5 [920 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.2-2 [33.9 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.3-2 [1314 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.30 all 5.30.3-4 [2806 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.30 amd64 5.30.3-4 [4019 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.30.3-4 [290 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1g-1 [1543 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.8-minimal amd64 3.8.4~rc1-1 [760 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.2.9-1 [94.3 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 python3.8-minimal amd64 3.8.4~rc1-1 [1943 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 python3-minimal amd64 3.8.2-3 [37.6 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 mime-support all 3.64 [37.8 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmpdec2 amd64 2.4.2-3 [84.1 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-4 [72.5 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-4 [160 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.32.3-1 [753 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.8-stdlib amd64 3.8.4~rc1-1 [1667 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 python3.8 amd64 3.8.4~rc1-1 [419 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3-stdlib amd64 3.8.2-3 [20.8 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 python3 amd64 3.8.2-3 [63.7 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main armhf gcc-10-base armhf 10.1.0-4 [197 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main armhf gcc-9-base armhf 9.3.0-14 [197 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-5 [262 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-5 [120 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-5 [67.9 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.2-3 [801 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabihf amd64 2.34.90.20200706-1 [2771 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.16-1 [104 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.30-8 [2631 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev amd64 9.3.0-14 [1701 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9 amd64 9.3.0-14 [10.7 MB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:9.2.1-3.1 [1644 B] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.5 [1473 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.5 [1909 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-arm-linux-gnueabihf-base amd64 9.3.0-13cross1 [197 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-arm-linux-gnueabihf amd64 9.3.0-13cross1 [6818 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabihf amd64 4:9.2.1-3.1 [16.7 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3.1 [39.9 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base all 9.3.0-13cross1 [193 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10.1.0-3cross1 [194 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armhf-cross all 2.30-2cross1 [1111 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-armhf-cross all 10.1.0-3cross1 [36.2 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armhf-cross all 10.1.0-3cross1 [82.4 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armhf-cross all 10.1.0-3cross1 [6632 B] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-armhf-cross all 9.3.0-13cross1 [363 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armhf-cross all 10.1.0-3cross1 [380 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armhf-cross all 10.1.0-3cross1 [115 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-armhf-cross all 9.3.0-13cross1 [659 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-arm-linux-gnueabihf amd64 9.3.0-13cross1 [7180 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabihf amd64 4:9.2.1-3.1 [1476 B] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armhf-cross all 5.4.19-1cross1 [1155 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armhf-cross all 2.30-2cross1 [2118 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-armhf-cross all 9.3.0-13cross1 [1725 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-arm-linux-gnueabihf amd64 9.3.0-13cross1 [7406 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabihf amd64 4:9.2.1-3.1 [1184 B] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-2 [8610 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-5+b1 [710 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3.1 [38.9 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3.1 [49.9 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armhf all 12.8 [6644 B] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 d-shlibs all 0.93 [17.7 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.2 [187 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.8.1-2 [38.2 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.8.1-2 [15.1 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.64.4-1 [1341 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.2 [1007 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-s1 armhf 10.1.0-4 [36.2 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main armhf libcrypt1 armhf 1:4.4.16-1 [101 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main armhf libc6 armhf 2.30-8 [2343 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main armhf libasan5 armhf 9.3.0-14 [370 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main armhf libatomic1 armhf 10.1.0-4 [6876 B] Get:106 http://debian.oregonstate.edu/debian unstable/main armhf libbrotli1 armhf 1.0.7-6.1 [268 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main armhf libbwa-dev armhf 0.7.17-5 [143 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main armhf libbz2-1.0 armhf 1.0.8-3 [44.5 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main armhf linux-libc-dev armhf 5.7.6-1 [1096 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main armhf libcrypt-dev armhf 1:4.4.16-1 [120 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main armhf libc6-dev armhf 2.30-8 [2136 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main armhf libcom-err2 armhf 1.45.6-1 [70.9 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main armhf libgmp10 armhf 2:6.2.0+dfsg-6 [206 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main armhf libnettle7 armhf 3.5.1+really3.5.1-2 [237 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main armhf libhogweed5 armhf 3.5.1+really3.5.1-2 [128 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main armhf libunistring2 armhf 0.9.10-4 [374 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main armhf libidn2-0 armhf 2.3.0-1 [83.2 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main armhf libffi7 armhf 3.3-4 [20.0 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main armhf libp11-kit0 armhf 0.23.20-1 [306 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main armhf libtasn1-6 armhf 4.16.0-2 [50.2 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main armhf libgnutls30 armhf 3.6.14-2 [1184 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main armhf libkrb5support0 armhf 1.17-10 [61.8 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main armhf libk5crypto3 armhf 1.17-10 [114 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main armhf libkeyutils1 armhf 1.6.1-2 [14.4 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main armhf libssl1.1 armhf 1.1.1g-1 [1308 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main armhf libkrb5-3 armhf 1.17-10 [324 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main armhf libgssapi-krb5-2 armhf 1.17-10 [136 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main armhf libdb5.3 armhf 5.3.28+dfsg1-0.6 [597 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main armhf libsasl2-modules-db armhf 2.1.27+dfsg-2 [67.5 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main armhf libsasl2-2 armhf 2.1.27+dfsg-2 [99.3 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-common all 2.4.50+dfsg-1 [92.9 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main armhf libldap-2.4-2 armhf 2.4.50+dfsg-1 [206 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main armhf libnghttp2-14 armhf 1.41.0-2 [61.7 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main armhf libpsl5 armhf 0.21.0-1.1 [54.0 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main armhf zlib1g armhf 1:1.2.11.dfsg-2 [85.4 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b1 [55.1 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main armhf libgpg-error0 armhf 1.38-2 [69.0 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main armhf libgcrypt20 armhf 1.8.5-5 [502 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main armhf libssh2-1 armhf 1.8.0-2.1 [129 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main armhf libcurl3-gnutls armhf 7.68.0-1 [288 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main armhf libcurl4 armhf 7.68.0-1 [290 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main armhf libcurl4-openssl-dev armhf 7.68.0-1 [383 kB] Get:143 http://debian.oregonstate.edu/debian unstable/main armhf libdeflate0 armhf 1.6-1 [46.5 kB] Get:144 http://debian.oregonstate.edu/debian unstable/main armhf libfml0 armhf 0.1-13 [70.0 kB] Get:145 http://debian.oregonstate.edu/debian unstable/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [185 kB] Get:146 http://debian.oregonstate.edu/debian unstable/main armhf libfml-dev armhf 0.1-13 [81.0 kB] Get:147 http://debian.oregonstate.edu/debian unstable/main armhf libgomp1 armhf 10.1.0-4 [84.4 kB] Get:148 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++6 armhf 10.1.0-4 [420 kB] Get:149 http://debian.oregonstate.edu/debian unstable/main armhf libubsan1 armhf 10.1.0-4 [116 kB] Get:150 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-9-dev armhf 9.3.0-14 [663 kB] Get:151 http://debian.oregonstate.edu/debian unstable/main armhf liblzma5 armhf 5.2.4-1+b1 [145 kB] Get:152 http://debian.oregonstate.edu/debian unstable/main armhf libhts3 armhf 1.10.2-4 [328 kB] Get:153 http://debian.oregonstate.edu/debian unstable/main armhf liblzma-dev armhf 5.2.4-1+b1 [204 kB] Get:154 http://debian.oregonstate.edu/debian unstable/main armhf libhts-dev armhf 1.10.2-4 [4797 kB] Get:155 http://debian.oregonstate.edu/debian unstable/main armhf libjsoncpp1 armhf 1.7.4-3.1 [67.2 kB] Get:156 http://debian.oregonstate.edu/debian unstable/main armhf libjsoncpp-dev armhf 1.7.4-3.1 [85.2 kB] Get:157 http://debian.oregonstate.edu/debian unstable/main armhf libssw0 armhf 1.1-9 [21.2 kB] Get:158 http://debian.oregonstate.edu/debian unstable/main armhf libssw-dev armhf 1.1-9 [24.7 kB] Get:159 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++-9-dev armhf 9.3.0-14 [1757 kB] Get:160 http://debian.oregonstate.edu/debian unstable/main amd64 pkg-config amd64 0.29.2-1 [65.1 kB] Get:161 http://debian.oregonstate.edu/debian unstable/main amd64 pkg-kde-tools all 0.15.32 [96.7 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 110 MB in 5s (23.3 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10428 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.35.2-7_amd64.deb ... Unpacking bsdextrautils (2.35.2-7) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../01-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-5_amd64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../03-libpipeline1_1.5.2-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.2-2) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.3-2_amd64.deb ... Unpacking man-db (2.9.3-2) ... Selecting previously unselected package perl-modules-5.30. Preparing to unpack .../05-perl-modules-5.30_5.30.3-4_all.deb ... Unpacking perl-modules-5.30 (5.30.3-4) ... 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Selecting previously unselected package python3.8-minimal. Preparing to unpack .../12-python3.8-minimal_3.8.4~rc1-1_amd64.deb ... Unpacking python3.8-minimal (3.8.4~rc1-1) ... Setting up libssl1.1:amd64 (1.1.1g-1) ... Setting up libpython3.8-minimal:amd64 (3.8.4~rc1-1) ... Setting up libexpat1:amd64 (2.2.9-1) ... Setting up python3.8-minimal (3.8.4~rc1-1) ... Selecting previously unselected package python3-minimal. (Reading database ... 13231 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.8.2-3_amd64.deb ... Unpacking python3-minimal (3.8.2-3) ... Selecting previously unselected package mime-support. Preparing to unpack .../1-mime-support_3.64_all.deb ... Unpacking mime-support (3.64) ... Selecting previously unselected package libmpdec2:amd64. Preparing to unpack .../2-libmpdec2_2.4.2-3_amd64.deb ... Unpacking libmpdec2:amd64 (2.4.2-3) ... Selecting previously unselected package readline-common. 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Selecting previously unselected package python3. (Reading database ... 13665 files and directories currently installed.) Preparing to unpack .../000-python3_3.8.2-3_amd64.deb ... Unpacking python3 (3.8.2-3) ... Selecting previously unselected package gcc-10-base:armhf. Preparing to unpack .../001-gcc-10-base_10.1.0-4_armhf.deb ... Unpacking gcc-10-base:armhf (10.1.0-4) ... Selecting previously unselected package gcc-9-base:armhf. Preparing to unpack .../002-gcc-9-base_9.3.0-14_armhf.deb ... Unpacking gcc-9-base:armhf (9.3.0-14) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../003-sensible-utils_0.0.12+nmu1_all.deb ... Unpacking sensible-utils (0.0.12+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.38-5_amd64.deb ... Unpacking libmagic-mgc (1:5.38-5) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../005-libmagic1_1%3a5.38-5_amd64.deb ... Unpacking libmagic1:amd64 (1:5.38-5) ... Selecting previously unselected package file. Preparing to unpack .../006-file_1%3a5.38-5_amd64.deb ... Unpacking file (1:5.38-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../007-gettext-base_0.19.8.1-10_amd64.deb ... Unpacking gettext-base (0.19.8.1-10) ... Selecting previously unselected package ucf. Preparing to unpack .../008-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../009-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../010-m4_1.4.18-4_amd64.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../011-autoconf_2.69-11.1_all.deb ... Unpacking autoconf (2.69-11.1) ... Selecting previously unselected package autotools-dev. 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Selecting previously unselected package libstdc++-9-dev:amd64. Preparing to unpack .../018-libstdc++-9-dev_9.3.0-14_amd64.deb ... Unpacking libstdc++-9-dev:amd64 (9.3.0-14) ... Selecting previously unselected package g++-9. Preparing to unpack .../019-g++-9_9.3.0-14_amd64.deb ... Unpacking g++-9 (9.3.0-14) ... Selecting previously unselected package g++. Preparing to unpack .../020-g++_4%3a9.2.1-3.1_amd64.deb ... Unpacking g++ (4:9.2.1-3.1) ... Selecting previously unselected package libdpkg-perl. Preparing to unpack .../021-libdpkg-perl_1.20.5_all.deb ... Unpacking libdpkg-perl (1.20.5) ... Selecting previously unselected package dpkg-dev. Preparing to unpack .../022-dpkg-dev_1.20.5_all.deb ... Unpacking dpkg-dev (1.20.5) ... Selecting previously unselected package build-essential. Preparing to unpack .../023-build-essential_12.8_amd64.deb ... Unpacking build-essential (12.8) ... Selecting previously unselected package gcc-9-arm-linux-gnueabihf-base:amd64. Preparing to unpack .../024-gcc-9-arm-linux-gnueabihf-base_9.3.0-13cross1_amd64.deb ... Unpacking gcc-9-arm-linux-gnueabihf-base:amd64 (9.3.0-13cross1) ... Selecting previously unselected package cpp-9-arm-linux-gnueabihf. Preparing to unpack .../025-cpp-9-arm-linux-gnueabihf_9.3.0-13cross1_amd64.deb ... Unpacking cpp-9-arm-linux-gnueabihf (9.3.0-13cross1) ... Selecting previously unselected package cpp-arm-linux-gnueabihf. Preparing to unpack .../026-cpp-arm-linux-gnueabihf_4%3a9.2.1-3.1_amd64.deb ... Unpacking cpp-arm-linux-gnueabihf (4:9.2.1-3.1) ... Selecting previously unselected package cross-config. Preparing to unpack .../027-cross-config_2.6.15-3.1_all.deb ... Unpacking cross-config (2.6.15-3.1) ... Selecting previously unselected package gcc-9-cross-base. Preparing to unpack .../028-gcc-9-cross-base_9.3.0-13cross1_all.deb ... Unpacking gcc-9-cross-base (9.3.0-13cross1) ... Selecting previously unselected package gcc-10-cross-base. Preparing to unpack .../029-gcc-10-cross-base_10.1.0-3cross1_all.deb ... Unpacking gcc-10-cross-base (10.1.0-3cross1) ... Selecting previously unselected package libc6-armhf-cross. Preparing to unpack .../030-libc6-armhf-cross_2.30-2cross1_all.deb ... Unpacking libc6-armhf-cross (2.30-2cross1) ... Selecting previously unselected package libgcc-s1-armhf-cross. Preparing to unpack .../031-libgcc-s1-armhf-cross_10.1.0-3cross1_all.deb ... Unpacking libgcc-s1-armhf-cross (10.1.0-3cross1) ... Selecting previously unselected package libgomp1-armhf-cross. Preparing to unpack .../032-libgomp1-armhf-cross_10.1.0-3cross1_all.deb ... Unpacking libgomp1-armhf-cross (10.1.0-3cross1) ... Selecting previously unselected package libatomic1-armhf-cross. Preparing to unpack .../033-libatomic1-armhf-cross_10.1.0-3cross1_all.deb ... Unpacking libatomic1-armhf-cross (10.1.0-3cross1) ... Selecting previously unselected package libasan5-armhf-cross. 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Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.38-5) ... Setting up libldap-common (2.4.50+dfsg-1) ... Setting up gcc-9-arm-linux-gnueabihf-base:amd64 (9.3.0-13cross1) ... Setting up gcc-10-base:armhf (10.1.0-4) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3.1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up linux-libc-dev-armhf-cross (5.4.19-1cross1) ... Setting up autopoint (0.19.8.1-10) ... Setting up d-shlibs (0.93) ... Setting up gcc-9-cross-base (9.3.0-13cross1) ... Setting up gcc-10-cross-base (10.1.0-3cross1) ... Setting up libbwa-dev:armhf (0.7.17-5) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.16-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libperl5.30:amd64 (5.30.3-4) ... Setting up libc6-dev:amd64 (2.30-8) ... Setting up libmpdec2:amd64 (2.4.2-3) ... Setting up binutils-arm-linux-gnueabihf (2.34.90.20200706-1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up readline-common (8.0-4) ... Setting up libxml2:amd64 (2.9.10+dfsg-5+b1) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up gcc-9-base:armhf (9.3.0-14) ... Setting up libgomp1-armhf-cross (10.1.0-3cross1) ... Setting up libstdc++-9-dev:amd64 (9.3.0-14) ... Setting up libtool (2.4.6-14) ... Setting up cpp-9-arm-linux-gnueabihf (9.3.0-13cross1) ... Setting up libgcc-s1-armhf-cross (10.1.0-3cross1) ... Setting up libreadline8:amd64 (8.0-4) ... Setting up libc6-dev-armhf-cross (2.30-2cross1) ... Setting up m4 (1.4.18-4) ... Setting up libatomic1-armhf-cross (10.1.0-3cross1) ... Setting up libasan5-armhf-cross (9.3.0-13cross1) ... Setting up perl (5.30.3-4) ... Setting up libstdc++6-armhf-cross (10.1.0-3cross1) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up libubsan1-armhf-cross (10.1.0-3cross1) ... Setting up ucf (3.0043) ... Setting up g++-9 (9.3.0-14) ... Setting up libdpkg-perl (1.20.5) ... Setting up autoconf (2.69-11.1) ... Setting up g++ (4:9.2.1-3.1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up libgcc-9-dev-armhf-cross (9.3.0-13cross1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libpython3.8-stdlib:amd64 (3.8.4~rc1-1) ... Setting up python3.8 (3.8.4~rc1-1) ... Setting up cpp-arm-linux-gnueabihf (4:9.2.1-3.1) ... Setting up libpython3-stdlib:amd64 (3.8.2-3) ... Setting up automake (1:1.16.2-3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up gettext (0.19.8.1-10) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.2) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up python3 (3.8.2-3) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.20.5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up pkg-config (0.29.2-1) ... Setting up pkg-kde-tools (0.15.32) ... Setting up gcc-9-arm-linux-gnueabihf (9.3.0-13cross1) ... Setting up libstdc++-9-dev-armhf-cross (9.3.0-13cross1) ... Setting up build-essential (12.8) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up gcc-arm-linux-gnueabihf (4:9.2.1-3.1) ... Setting up libfile-stripnondeterminism-perl (1.8.1-2) ... Setting up po-debconf (1.0.21) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-9-arm-linux-gnueabihf (9.3.0-13cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.8.1-2) ... Setting up g++-arm-linux-gnueabihf (4:9.2.1-3.1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3.1) ... Setting up dpkg-cross (2.6.15-3.1) ... Setting up crossbuild-essential-armhf (12.8) ... Setting up libcrypt1:armhf (1:4.4.16-1) ... Setting up libgcc-s1:armhf (10.1.0-4) ... Setting up dh-autoreconf (19) ... Setting up libc6:armhf (2.30-8) ... Setting up libnettle7:armhf (3.5.1+really3.5.1-2) ... Setting up libcrypt-dev:armhf (1:4.4.16-1) ... Setting up libtasn1-6:armhf (4.16.0-2) ... Setting up libc6-dev:armhf (2.30-8) ... Setting up libbz2-1.0:armhf (1.0.8-3) ... Setting up libdb5.3:armhf (5.3.28+dfsg1-0.6) ... Setting up libstdc++6:armhf (10.1.0-4) ... Setting up libjsoncpp1:armhf (1.7.4-3.1) ... Setting up libjsoncpp-dev:armhf (1.7.4-3.1) ... Setting up libkeyutils1:armhf (1.6.1-2) ... Setting up liblzma5:armhf (5.2.4-1+b1) ... Setting up libgpg-error0:armhf (1.38-2) ... Setting up libssl1.1:armhf (1.1.1g-1) ... Setting up libbrotli1:armhf (1.0.7-6.1) ... Setting up libffi7:armhf (3.3-4) ... Setting up libnghttp2-14:armhf (1.41.0-2) ... Setting up libunistring2:armhf (0.9.10-4) ... Setting up libdeflate0:armhf (1.6-1) ... Setting up libgcrypt20:armhf (1.8.5-5) ... Setting up debhelper (13.2) ... Setting up zlib1g:armhf (1:1.2.11.dfsg-2) ... Setting up libidn2-0:armhf (2.3.0-1) ... Setting up libcom-err2:armhf (1.45.6-1) ... Setting up libgomp1:armhf (10.1.0-4) ... Setting up libfml0:armhf (0.1-13) ... Setting up libkrb5support0:armhf (1.17-10) ... Setting up libsasl2-modules-db:armhf (2.1.27+dfsg-2) ... Setting up libasan5:armhf (9.3.0-14) ... Setting up libgmp10:armhf (2:6.2.0+dfsg-6) ... Setting up libp11-kit0:armhf (0.23.20-1) ... Setting up libatomic1:armhf (10.1.0-4) ... Setting up libk5crypto3:armhf (1.17-10) ... Setting up libsasl2-2:armhf (2.1.27+dfsg-2) ... Setting up liblzma-dev:armhf (5.2.4-1+b1) ... Setting up libubsan1:armhf (10.1.0-4) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ... Setting up libssh2-1:armhf (1.8.0-2.1) ... Setting up libkrb5-3:armhf (1.17-10) ... Setting up libssw0:armhf (1.1-9) ... Setting up libpsl5:armhf (0.21.0-1.1) ... Setting up libfml-dev:armhf (0.1-13) ... Setting up libhogweed5:armhf (3.5.1+really3.5.1-2) ... Setting up libssw-dev:armhf (1.1-9) ... Setting up libgcc-9-dev:armhf (9.3.0-14) ... Setting up libgnutls30:armhf (3.6.14-2) ... Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b1) ... Setting up libgssapi-krb5-2:armhf (1.17-10) ... Setting up libstdc++-9-dev:armhf (9.3.0-14) ... Setting up libldap-2.4-2:armhf (2.4.50+dfsg-1) ... Setting up libcurl3-gnutls:armhf (7.68.0-1) ... Setting up libcurl4:armhf (7.68.0-1) ... Setting up libhts3:armhf (1.10.2-4) ... Setting up libhts-dev:armhf (1.10.2-4) ... Setting up libcurl4-openssl-dev:armhf (7.68.0-1) ... Setting up sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.30-8) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-9-amd64 #1 SMP Debian 4.19.118-2 (2020-04-29) amd64 (x86_64) Toolchain package versions: binutils_2.34.90.20200706-1 dpkg-dev_1.20.5 g++-9_9.3.0-14 gcc-9_9.3.0-14 libc6-dev_2.30-8 libstdc++-9-dev_9.3.0-14 libstdc++-9-dev-armhf-cross_9.3.0-13cross1 libstdc++6_10.1.0-4 libstdc++6-armhf-cross_10.1.0-3cross1 linux-libc-dev_5.7.6-1 Package versions: adduser_3.118 apt_2.1.7 autoconf_2.69-11.1 automake_1:1.16.2-3 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-6 binutils_2.34.90.20200706-1 binutils-arm-linux-gnueabihf_2.34.90.20200706-1 binutils-common_2.34.90.20200706-1 binutils-x86-64-linux-gnu_2.34.90.20200706-1 bsdextrautils_2.35.2-7 bsdutils_1:2.35.2-7 build-essential_12.8 bzip2_1.0.8-3 coreutils_8.32-2 cpp_4:9.2.1-3.1 cpp-8_8.4.0-4 cpp-9_9.3.0-14 cpp-9-arm-linux-gnueabihf_9.3.0-13cross1 cpp-arm-linux-gnueabihf_4:9.2.1-3.1 cross-config_2.6.15-3.1 crossbuild-essential-armhf_12.8 d-shlibs_0.93 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2 debian-archive-keyring_2019.1 debianutils_4.11 dh-autoreconf_19 dh-strip-nondeterminism_1.8.1-2 diffutils_1:3.7-3 dpkg_1.20.5 dpkg-cross_2.6.15-3.1 dpkg-dev_1.20.5 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.35.2-7 file_1:5.38-5 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-9_9.3.0-14 g++-9-arm-linux-gnueabihf_9.3.0-13cross1 g++-arm-linux-gnueabihf_4:9.2.1-3.1 gcc_4:9.2.1-3.1 gcc-10-base_10.1.0-4 gcc-10-cross-base_10.1.0-3cross1 gcc-8-base_8.4.0-4 gcc-9_9.3.0-14 gcc-9-arm-linux-gnueabihf_9.3.0-13cross1 gcc-9-arm-linux-gnueabihf-base_9.3.0-13cross1 gcc-9-base_9.3.0-14 gcc-9-cross-base_9.3.0-13cross1 gcc-arm-linux-gnueabihf_4:9.2.1-3.1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.1.7 libarchive-zip-perl_1.68-1 libasan5_9.3.0-14 libasan5-armhf-cross_9.3.0-13cross1 libatomic1_10.1.0-4 libatomic1-armhf-cross_10.1.0-3cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3+b1 libbinutils_2.34.90.20200706-1 libblkid1_2.35.2-7 libbrotli1_1.0.7-6.1 libbwa-dev_0.7.17-5 libbz2-1.0_1.0.8-3 libc-bin_2.30-8 libc-dev-bin_2.30-8 libc6_2.30-8 libc6-armhf-cross_2.30-2cross1 libc6-dev_2.30-8 libc6-dev-armhf-cross_2.30-2cross1 libcap-ng0_0.7.9-2.2 libcc1-0_10.1.0-4 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000003-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 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Format: 3.0 (quilt) Source: libseqlib Binary: libseqlib1, libseqlib-dev Architecture: any Version: 1.1.2+dfsg-6 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/walaj/SeqLib Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/libseqlib Vcs-Git: https://salsa.debian.org/med-team/libseqlib.git Build-Depends: debhelper-compat (= 12), d-shlibs, pkg-config, pkg-kde-tools, libhts-dev, libcurl4-openssl-dev | libcurl4-dev, zlib1g-dev, libfml-dev (>= 0.1-3), libbwa-dev (>= 0.7.15-3), libjsoncpp-dev, libssw-dev Package-List: libseqlib-dev deb libdevel optional arch=any libseqlib1 deb libs optional arch=any Checksums-Sha1: e15777412aa1cb70c9e80b66080490da425d399c 157400 libseqlib_1.1.2+dfsg.orig.tar.xz 22e7e6a6978c3185347151b57630ff32ed4e3a2c 13792 libseqlib_1.1.2+dfsg-6.debian.tar.xz Checksums-Sha256: fda571050683e015dba119d6946b41287107a210166c9b4575ed5fba3070500e 157400 libseqlib_1.1.2+dfsg.orig.tar.xz 6056cf8b28041ce4b4a32e11dca50bdd2a4f8357ff289fc4572efafdf36b15ae 13792 libseqlib_1.1.2+dfsg-6.debian.tar.xz Files: 0387f983d524a719183d9257a021c2f4 157400 libseqlib_1.1.2+dfsg.orig.tar.xz ddbaaadd62096dd357650cb1036e5547 13792 libseqlib_1.1.2+dfsg-6.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAl5IRoYACgkQPCZ2P2xn 5uKqTg/9HRSB2XvaqQiZEdQ67/mac6VbUXCV+eC6QSLtzJRk+g96CDkBlJ2ZCcpp HFwZs0/OcDvvEa34CXO3SrsQEgUIIEkYarO38RzaJxEHMoZwb/tDFM9iRoWvirxC ANhUZqUlcosJbbmOgDTw696g+Nz6l4ogNBsFF3lYIH7iW1wDASIYTc4OOC0xt4Ho 9M+GJ2m7FD1+eGXtJeqE3YIzY4O7ILQlBmVCFbAQuAva5ABSSXB/HEnobBL9I6wk WZqfJbwNsIkujtt9DPj6WUcKcakc03KG2oFLFllYXn80P2vK5qblQm3cn09V2Yfs 2epTSiEVgzw+V3KsZPLxlVO/v2c1fglbLYmYw/YPe09NRQQZYj9TEVmRUpzEh1Pp 5uiDW8S1I9fkT0Pa7TD91m9iSZIq7BHfv2ICSPVyAZNXJrv5jLY/mz1sww4YCaQK lqa0OAok6mMsrGAhf5JfOcys1z6Q/RkeKYdpFKZN5oOjak5OUMgq9C7zlssYjI4d d0p526yRjaBpEGDSELOtHWxSSjzOysvNNGD2J2AQYgn9smlUMqoaOWyIpEmMen5w 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dpkg-source: info: applying fml_include_path.patch dpkg-source: info: applying dynamic_lib.patch dpkg-source: info: applying use_debian_packaged_jsoncpp.patch dpkg-source: info: applying use_debian_packaged_ssw.patch dpkg-source: info: applying pkg-config.patch dpkg-source: info: applying fix_private_htslib_usage.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-47e75d3e-7b59-43c1-b39a-b890335e1e4d SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarmhf -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package libseqlib dpkg-buildpackage: info: source version 1.1.2+dfsg-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --with pkgkde_symbolshelper dh_clean debian/rules build-arch dh build-arch --with pkgkde_symbolshelper dh_update_autotools_config -a dh_autoreconf -a libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac, libtoolize: and rerunning libtoolize and aclocal. libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am. libtoolize: 'AC_PROG_RANLIB' is rendered obsolete by 'LT_INIT' configure.ac:17: installing './compile' configure.ac:19: installing './config.guess' configure.ac:19: installing './config.sub' configure.ac:4: installing './missing' src/Makefile.am: installing './depcomp' dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=arm-linux-gnueabihf configure: loading site script /etc/dpkg-cross/cross-config.armhf checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for arm-linux-gnueabihf-strip... arm-linux-gnueabihf-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for arm-linux-gnueabihf-g++... arm-linux-gnueabihf-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether arm-linux-gnueabihf-g++ accepts -g... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of arm-linux-gnueabihf-g++... none checking for arm-linux-gnueabihf-gcc... arm-linux-gnueabihf-gcc checking whether we are using the GNU C compiler... yes checking whether arm-linux-gnueabihf-gcc accepts -g... yes checking for arm-linux-gnueabihf-gcc option to accept ISO C89... none needed checking whether arm-linux-gnueabihf-gcc understands -c and -o together... yes checking dependency style of arm-linux-gnueabihf-gcc... none checking for arm-linux-gnueabihf-ranlib... arm-linux-gnueabihf-ranlib checking build system type... x86_64-pc-linux-gnu checking host system type... arm-unknown-linux-gnueabihf checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by arm-linux-gnueabihf-gcc... /usr/arm-linux-gnueabihf/bin/ld checking if the linker (/usr/arm-linux-gnueabihf/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/arm-linux-gnueabihf-nm -B checking the name lister (/usr/bin/arm-linux-gnueabihf-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/arm-linux-gnueabihf/bin/ld option to reload object files... -r checking for arm-linux-gnueabihf-objdump... arm-linux-gnueabihf-objdump checking how to recognize dependent libraries... pass_all checking for arm-linux-gnueabihf-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for arm-linux-gnueabihf-ar... arm-linux-gnueabihf-ar checking for archiver @FILE support... @ checking for arm-linux-gnueabihf-strip... (cached) arm-linux-gnueabihf-strip checking for arm-linux-gnueabihf-ranlib... (cached) arm-linux-gnueabihf-ranlib checking command to parse /usr/bin/arm-linux-gnueabihf-nm -B output from arm-linux-gnueabihf-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for arm-linux-gnueabihf-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... arm-linux-gnueabihf-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if arm-linux-gnueabihf-gcc supports -fno-rtti -fno-exceptions... no checking for arm-linux-gnueabihf-gcc option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabihf-gcc PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabihf-gcc static flag -static works... yes checking if arm-linux-gnueabihf-gcc supports -c -o file.o... yes checking if arm-linux-gnueabihf-gcc supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabihf-gcc linker (/usr/arm-linux-gnueabihf/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... arm-linux-gnueabihf-g++ -E checking for ld used by arm-linux-gnueabihf-g++... /usr/arm-linux-gnueabihf/bin/ld checking if the linker (/usr/arm-linux-gnueabihf/bin/ld) is GNU ld... yes checking whether the arm-linux-gnueabihf-g++ linker (/usr/arm-linux-gnueabihf/bin/ld) supports shared libraries... yes checking for arm-linux-gnueabihf-g++ option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabihf-g++ PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabihf-g++ static flag -static works... yes checking if arm-linux-gnueabihf-g++ supports -c -o file.o... yes checking if arm-linux-gnueabihf-g++ supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabihf-g++ linker (/usr/arm-linux-gnueabihf/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking zlib.h usability... yes checking zlib.h presence... yes checking for zlib.h... yes checking for library containing gzopen... -lz checking for library containing clock_gettime... none required checking for arm-linux-gnueabihf-pkg-config... /usr/bin/arm-linux-gnueabihf-pkg-config checking pkg-config is at least version 0.9.0... yes checking for htslib... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/seqtools/Makefile config.status: creating libseqlib.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in src make[3]: Entering directory '/<>/src' /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-FastqReader.lo `test -f 'FastqReader.cpp' || echo './'`FastqReader.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c FastqReader.cpp -fPIC -DPIC -o .libs/libseqlib_la-FastqReader.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c FastqReader.cpp -o libseqlib_la-FastqReader.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BFC.lo `test -f 'BFC.cpp' || echo './'`BFC.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BFC.cpp -fPIC -DPIC -o .libs/libseqlib_la-BFC.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BFC.cpp -o libseqlib_la-BFC.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-ReadFilter.lo `test -f 'ReadFilter.cpp' || echo './'`ReadFilter.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ReadFilter.cpp -fPIC -DPIC -o .libs/libseqlib_la-ReadFilter.o In file included from /usr/arm-linux-gnueabihf/include/c++/9/vector:72, from ../SeqLib/ReadFilter.h:7, from ReadFilter.cpp:1: /usr/arm-linux-gnueabihf/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const SeqLib::Filter::AbstractRule&}; _Tp = SeqLib::Filter::AbstractRule; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/9/vector:67, from ../SeqLib/ReadFilter.h:7, from ReadFilter.cpp:1: /usr/arm-linux-gnueabihf/include/c++/9/bits/stl_vector.h: In member function ‘void SeqLib::Filter::ReadFilter::AddRule(const SeqLib::Filter::AbstractRule&)’: /usr/arm-linux-gnueabihf/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/9/bits/stl_vector.h: In constructor ‘SeqLib::Filter::ReadFilterCollection::ReadFilterCollection(const string&, const SeqLib::BamHeader&)’: /usr/arm-linux-gnueabihf/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1195 | _M_realloc_insert(end(), __x); | ^~~~~~~~~~~~~~~~~ libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ReadFilter.cpp -o libseqlib_la-ReadFilter.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-SeqPlot.lo `test -f 'SeqPlot.cpp' || echo './'`SeqPlot.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c SeqPlot.cpp -fPIC -DPIC -o .libs/libseqlib_la-SeqPlot.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c SeqPlot.cpp -o libseqlib_la-SeqPlot.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-GenomicRegion.lo `test -f 'GenomicRegion.cpp' || echo './'`GenomicRegion.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c GenomicRegion.cpp -fPIC -DPIC -o .libs/libseqlib_la-GenomicRegion.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c GenomicRegion.cpp -o libseqlib_la-GenomicRegion.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-RefGenome.lo `test -f 'RefGenome.cpp' || echo './'`RefGenome.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c RefGenome.cpp -fPIC -DPIC -o .libs/libseqlib_la-RefGenome.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c RefGenome.cpp -o libseqlib_la-RefGenome.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BamWriter.lo `test -f 'BamWriter.cpp' || echo './'`BamWriter.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamWriter.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamWriter.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamWriter.cpp -o libseqlib_la-BamWriter.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BamReader.lo `test -f 'BamReader.cpp' || echo './'`BamReader.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamReader.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamReader.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamReader.cpp -o libseqlib_la-BamReader.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BWAWrapper.lo `test -f 'BWAWrapper.cpp' || echo './'`BWAWrapper.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BWAWrapper.cpp -fPIC -DPIC -o .libs/libseqlib_la-BWAWrapper.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BWAWrapper.cpp -o libseqlib_la-BWAWrapper.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BamRecord.lo `test -f 'BamRecord.cpp' || echo './'`BamRecord.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamRecord.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamRecord.o In file included from /usr/arm-linux-gnueabihf/include/c++/9/vector:72, from ../SeqLib/BamRecord.h:6, from BamRecord.cpp:1: /usr/arm-linux-gnueabihf/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~ libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamRecord.cpp -o libseqlib_la-BamRecord.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-FermiAssembler.lo `test -f 'FermiAssembler.cpp' || echo './'`FermiAssembler.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c FermiAssembler.cpp -fPIC -DPIC -o .libs/libseqlib_la-FermiAssembler.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c FermiAssembler.cpp -o libseqlib_la-FermiAssembler.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BamHeader.lo `test -f 'BamHeader.cpp' || echo './'`BamHeader.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamHeader.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamHeader.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamHeader.cpp -o libseqlib_la-BamHeader.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link arm-linux-gnueabihf-g++ -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 1:0 -lfml `/usr/bin/arm-linux-gnueabihf-pkg-config --libs htslib` `/usr/bin/arm-linux-gnueabihf-pkg-config --libs jsoncpp` -lssw -Wl,-z,relro -Wl,-z,now -o libseqlib.la -rpath /usr/lib/arm-linux-gnueabihf libseqlib_la-FastqReader.lo libseqlib_la-BFC.lo libseqlib_la-ReadFilter.lo libseqlib_la-SeqPlot.lo libseqlib_la-GenomicRegion.lo libseqlib_la-RefGenome.lo libseqlib_la-BamWriter.lo libseqlib_la-BamReader.lo libseqlib_la-BWAWrapper.lo libseqlib_la-BamRecord.lo libseqlib_la-FermiAssembler.lo libseqlib_la-BamHeader.lo -lz -pthread libtool: link: arm-linux-gnueabihf-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc-cross/arm-linux-gnueabihf/9/../../../../arm-linux-gnueabihf/lib/crti.o /usr/lib/gcc-cross/arm-linux-gnueabihf/9/crtbeginS.o .libs/libseqlib_la-FastqReader.o .libs/libseqlib_la-BFC.o .libs/libseqlib_la-ReadFilter.o .libs/libseqlib_la-SeqPlot.o .libs/libseqlib_la-GenomicRegion.o .libs/libseqlib_la-RefGenome.o .libs/libseqlib_la-BamWriter.o .libs/libseqlib_la-BamReader.o .libs/libseqlib_la-BWAWrapper.o .libs/libseqlib_la-BamRecord.o .libs/libseqlib_la-FermiAssembler.o .libs/libseqlib_la-BamHeader.o -lfml -L/usr/lib/arm-linux-gnueabihf -lhts -ljsoncpp -lssw -lz -L/usr/lib/gcc-cross/arm-linux-gnueabihf/9 -L/usr/lib/gcc-cross/arm-linux-gnueabihf/9/../../../../arm-linux-gnueabihf/lib -L/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc-cross/arm-linux-gnueabihf/9/crtendS.o /usr/lib/gcc-cross/arm-linux-gnueabihf/9/../../../../arm-linux-gnueabihf/lib/crtn.o -g -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -pthread -pthread -Wl,-soname -Wl,libseqlib.so.1 -o .libs/libseqlib.so.1.0.0 libtool: link: (cd ".libs" && rm -f "libseqlib.so.1" && ln -s "libseqlib.so.1.0.0" "libseqlib.so.1") libtool: link: (cd ".libs" && rm -f "libseqlib.so" && ln -s "libseqlib.so.1.0.0" "libseqlib.so") libtool: link: arm-linux-gnueabihf-ar cr .libs/libseqlib.a libseqlib_la-FastqReader.o libseqlib_la-BFC.o libseqlib_la-ReadFilter.o libseqlib_la-SeqPlot.o libseqlib_la-GenomicRegion.o libseqlib_la-RefGenome.o libseqlib_la-BamWriter.o libseqlib_la-BamReader.o libseqlib_la-BWAWrapper.o libseqlib_la-BamRecord.o libseqlib_la-FermiAssembler.o libseqlib_la-BamHeader.o libtool: link: arm-linux-gnueabihf-ranlib .libs/libseqlib.a libtool: link: ( cd ".libs" && rm -f "libseqlib.la" && ln -s "../libseqlib.la" "libseqlib.la" ) make[3]: Leaving directory '/<>/src' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --with pkgkde_symbolshelper dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/libseqlib-1.1.2\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' echo "mkdir -p bin && cp src/libseqlib.a fermi-lite/libfml.a bwa/libbwa.a htslib/libhts.a bin" mkdir -p bin && cp src/libseqlib.a fermi-lite/libfml.a bwa/libbwa.a htslib/libhts.a bin make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install # Trick to get also headers moved by d-shlibmove cp -a SeqLib debian # note: also GenomicRegionCollection.cpp is really needed by freebayes d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/SeqLib usr/include \ --override s/libfml0-dev/libfml-dev/ \ --override s/libssw0-dev/libssw-dev/ \ src/.libs/libseqlib.so Library package automatic movement utility --> libfml-dev package exists. --> libhts-dev package exists. --> libjsoncpp-dev package exists. --> libssw-dev package exists. --> zlib1g-dev package exists. set -e install -d -m 755 debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf install -d -m 755 debian/libseqlib1/usr/lib/arm-linux-gnueabihf mv src/.libs/libseqlib.a debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf mv src/.libs/libseqlib.so debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf mv /<>/src/.libs/libseqlib.so.1 debian/libseqlib1/usr/lib/arm-linux-gnueabihf mv /<>/src/.libs/libseqlib.so.1.0.0 debian/libseqlib1/usr/lib/arm-linux-gnueabihf PKGDEV=libseqlib-dev PKGSHL=libseqlib1 install -d -m 755 debian/libseqlib-dev/usr/include mv debian/SeqLib debian/libseqlib-dev/usr/include mkdir -p /<>/debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf/pkgconfig mv libseqlib.pc /<>/debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf/pkgconfig make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_lintian -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: symbol bwa_idx_load used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwa_verbose used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol err_fwrite used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol nst_nt4_table used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol err_fclose used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol kseq_init used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwa_idx_destroy used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwt_cal_sa used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwa_fill_scmat used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'libseqlib1' in '../libseqlib1_1.1.2+dfsg-6_armhf.deb'. dpkg-deb: building package 'libseqlib1-dbgsym' in '../libseqlib1-dbgsym_1.1.2+dfsg-6_armhf.deb'. dpkg-deb: building package 'libseqlib-dev' in '../libseqlib-dev_1.1.2+dfsg-6_armhf.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../libseqlib_1.1.2+dfsg-6_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-07-11T05:17:56Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libseqlib_1.1.2+dfsg-6_armhf.changes: ------------------------------------- Format: 1.8 Date: Sat, 15 Feb 2020 18:48:43 +0100 Source: libseqlib Binary: libseqlib-dev libseqlib1 libseqlib1-dbgsym Built-For-Profiles: cross nocheck Architecture: armhf Version: 1.1.2+dfsg-6 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: libseqlib-dev - C++ htslib/bwa-mem/fermi interface for interrogating sequence dat libseqlib1 - C++ htslib/bwa-mem/fermi interface for interrogating sequence dat Changes: libseqlib (1.1.2+dfsg-6) unstable; urgency=medium . * Team upload. * Standards-Version: 4.5.0 (routine-update) * Set upstream metadata fields: Bug-Submit. * debian/control: use ${devlibs:Depends} for the -dev package * Properly link the shared library against libjsoncpp, libfml, ssw, & htslib * Modified use of pkg-config to be friendly for cross-building this package * Use pkg-kde-tools to manage the symbols Checksums-Sha1: 448164e6e47a9159285c53fb702f68bba0ab33e3 164536 libseqlib-dev_1.1.2+dfsg-6_armhf.deb 4953c3f0bdb46581318b65cfc60a3c7af01f8b1c 1618820 libseqlib1-dbgsym_1.1.2+dfsg-6_armhf.deb 773876551aa5a11e108465fb5f95566463848ccd 106424 libseqlib1_1.1.2+dfsg-6_armhf.deb e58aa5a61ce46b5b14acb52799ccf6f0a18fd356 6710 libseqlib_1.1.2+dfsg-6_armhf.buildinfo Checksums-Sha256: 1dc42a752fb95a0e880db656ecb28632d07b8933e27416dada417b14b60a24f8 164536 libseqlib-dev_1.1.2+dfsg-6_armhf.deb f4dadf0580e219438324a873f754182cfb4358cd0312f5e8e44874d37931b2d8 1618820 libseqlib1-dbgsym_1.1.2+dfsg-6_armhf.deb 78898796d18da03cb8a40fb7454275b0a36fdf5980afaf6ae7bf2578635eb574 106424 libseqlib1_1.1.2+dfsg-6_armhf.deb 0d175991cf3f6d11838068f312810295675656149256ca5eb57334a05be1ce4e 6710 libseqlib_1.1.2+dfsg-6_armhf.buildinfo Files: a141c3569b54f36a6546baa7c1700fd5 164536 libdevel optional libseqlib-dev_1.1.2+dfsg-6_armhf.deb f6a85068258cbbaa66c05df3de52811f 1618820 debug optional libseqlib1-dbgsym_1.1.2+dfsg-6_armhf.deb b461e9100d2e14e697caffcf33d38a52 106424 libs optional libseqlib1_1.1.2+dfsg-6_armhf.deb c0ded3bbf754a18dc8458eab22514ce5 6710 science optional libseqlib_1.1.2+dfsg-6_armhf.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: libseqlib Binary: libseqlib-dev libseqlib1 libseqlib1-dbgsym Architecture: armhf Version: 1.1.2+dfsg-6 Checksums-Md5: a141c3569b54f36a6546baa7c1700fd5 164536 libseqlib-dev_1.1.2+dfsg-6_armhf.deb f6a85068258cbbaa66c05df3de52811f 1618820 libseqlib1-dbgsym_1.1.2+dfsg-6_armhf.deb b461e9100d2e14e697caffcf33d38a52 106424 libseqlib1_1.1.2+dfsg-6_armhf.deb Checksums-Sha1: 448164e6e47a9159285c53fb702f68bba0ab33e3 164536 libseqlib-dev_1.1.2+dfsg-6_armhf.deb 4953c3f0bdb46581318b65cfc60a3c7af01f8b1c 1618820 libseqlib1-dbgsym_1.1.2+dfsg-6_armhf.deb 773876551aa5a11e108465fb5f95566463848ccd 106424 libseqlib1_1.1.2+dfsg-6_armhf.deb Checksums-Sha256: 1dc42a752fb95a0e880db656ecb28632d07b8933e27416dada417b14b60a24f8 164536 libseqlib-dev_1.1.2+dfsg-6_armhf.deb f4dadf0580e219438324a873f754182cfb4358cd0312f5e8e44874d37931b2d8 1618820 libseqlib1-dbgsym_1.1.2+dfsg-6_armhf.deb 78898796d18da03cb8a40fb7454275b0a36fdf5980afaf6ae7bf2578635eb574 106424 libseqlib1_1.1.2+dfsg-6_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sat, 11 Jul 2020 05:17:55 +0000 Build-Path: /<> Installed-Build-Depends: adduser (= 3.118), apt (= 2.1.7), autoconf (= 2.69-11.1), automake (= 1:1.16.2-3), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-6), binutils (= 2.34.90.20200706-1), binutils-common (= 2.34.90.20200706-1), binutils-x86-64-linux-gnu (= 2.34.90.20200706-1), bsdextrautils (= 2.35.2-7), bsdutils (= 1:2.35.2-7), build-essential (= 12.8), bzip2 (= 1.0.8-3), coreutils (= 8.32-2), cpp (= 4:9.2.1-3.1), cpp-9 (= 9.3.0-14), d-shlibs (= 0.93), dash (= 0.5.10.2-7), debconf (= 1.5.74), debhelper (= 13.2), debian-archive-keyring (= 2019.1), debianutils (= 4.11), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.8.1-2), diffutils (= 1:3.7-3), dpkg (= 1.20.5), dpkg-dev (= 1.20.5), dwz (= 0.13-5), file (= 1:5.38-5), findutils (= 4.7.0-1), g++ (= 4:9.2.1-3.1), g++-9 (= 9.3.0-14), gcc (= 4:9.2.1-3.1), gcc-10-base (= 10.1.0-4), gcc-9 (= 9.3.0-14), gcc-9-base (= 9.3.0-14), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), gpgv (= 2.2.20-1), grep (= 3.4-1), groff-base (= 1.22.4-5), gzip (= 1.10-2), hostname (= 3.23), init-system-helpers (= 1.58), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libapt-pkg6.0 (= 2.1.7), libarchive-zip-perl (= 1.68-1), libasan5 (= 9.3.0-14), libatomic1 (= 10.1.0-4), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3), libaudit1 (= 1:2.8.5-3+b1), libbinutils (= 2.34.90.20200706-1), libblkid1 (= 2.35.2-7), libbrotli1 (= 1.0.7-6.1), libbwa-dev (= 0.7.17-5), libbz2-1.0 (= 1.0.8-3), libc-bin (= 2.30-8), libc-dev-bin (= 2.30-8), libc6 (= 2.30-8), libc6-dev (= 2.30-8), libcap-ng0 (= 0.7.9-2.2), libcc1-0 (= 10.1.0-4), libcom-err2 (= 1.45.6-1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.16-1), libcrypt1 (= 1:4.4.16-1), libctf-nobfd0 (= 2.34.90.20200706-1), libctf0 (= 2.34.90.20200706-1), libcurl3-gnutls (= 7.68.0-1), libcurl4 (= 7.68.0-1), libcurl4-openssl-dev (= 7.68.0-1), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.253), libdebhelper-perl (= 13.2), libdeflate0 (= 1.6-1), libdpkg-perl (= 1.20.5), libelf1 (= 0.176-1.1), libexpat1 (= 2.2.9-1), libffi7 (= 3.3-4), libfile-stripnondeterminism-perl (= 1.8.1-2), libfml-dev (= 0.1-13), libfml0 (= 0.1-13), libgcc-9-dev (= 9.3.0-14), libgcc-s1 (= 10.1.0-4), libgcrypt20 (= 1.8.5-5), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libglib2.0-0 (= 2.64.4-1), libgmp10 (= 2:6.2.0+dfsg-6), libgnutls30 (= 3.6.14-2), libgomp1 (= 10.1.0-4), libgpg-error0 (= 1.38-2), libgssapi-krb5-2 (= 1.17-10), libhogweed5 (= 3.5.1+really3.5.1-2), libhts-dev (= 1.10.2-4), libhts3 (= 1.10.2-4), libicu67 (= 67.1-2), libidn2-0 (= 2.3.0-1), libisl22 (= 0.22.1-1), libitm1 (= 10.1.0-4), libjsoncpp-dev (= 1.7.4-3.1), libjsoncpp1 (= 1.7.4-3.1), libk5crypto3 (= 1.17-10), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.17-10), libkrb5support0 (= 1.17-10), libldap-2.4-2 (= 2.4.50+dfsg-1), libldap-common (= 2.4.50+dfsg-1), liblsan0 (= 10.1.0-4), liblz4-1 (= 1.9.2-2), liblzma-dev (= 5.2.4-1+b1), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-5), libmagic1 (= 1:5.38-5), libmount1 (= 2.35.2-7), libmpc3 (= 1.1.0-1), libmpdec2 (= 2.4.2-3), libmpfr6 (= 4.0.2-1), libncursesw6 (= 6.2-1), libnettle7 (= 3.5.1+really3.5.1-2), libnghttp2-14 (= 1.41.0-2), libp11-kit0 (= 0.23.20-1), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-13), libperl5.30 (= 5.30.3-4), libpipeline1 (= 1.5.2-2), libpsl5 (= 0.21.0-1.1), libpython3-stdlib (= 3.8.2-3), libpython3.8-minimal (= 3.8.4~rc1-1), libpython3.8-stdlib (= 3.8.4~rc1-1), libquadmath0 (= 10.1.0-4), libreadline8 (= 8.0-4), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b1), libsasl2-2 (= 2.1.27+dfsg-2), libsasl2-modules-db (= 2.1.27+dfsg-2), libseccomp2 (= 2.4.3-1+b1), libselinux1 (= 3.0-1+b3), libsemanage-common (= 3.0-1), libsemanage1 (= 3.0-1+b3), libsepol1 (= 3.0-1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.35.2-7), libsqlite3-0 (= 3.32.3-1), libssh2-1 (= 1.8.0-2.1), libssl1.1 (= 1.1.1g-1), libssw-dev (= 1.1-9), libssw0 (= 1.1-9), libstdc++-9-dev (= 9.3.0-14), libstdc++6 (= 10.1.0-4), libsub-override-perl (= 0.09-2), libsystemd0 (= 245.6-2), libtasn1-6 (= 4.16.0-2), libtinfo6 (= 6.2-1), libtool (= 2.4.6-14), libtsan0 (= 10.1.0-4), libubsan1 (= 10.1.0-4), libuchardet0 (= 0.0.7-1), libudev1 (= 245.6-2), libunistring2 (= 0.9.10-4), libuuid1 (= 2.35.2-7), libxml2 (= 2.9.10+dfsg-5+b1), libzstd1 (= 1.4.5+dfsg-3), linux-libc-dev (= 5.7.6-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.3-4), man-db (= 2.9.3-2), mawk (= 1.3.4.20200120-2), mime-support (= 3.64), ncurses-base (= 6.2-1), ncurses-bin (= 6.2-1), passwd (= 1:4.8.1-1), patch (= 2.7.6-6), perl (= 5.30.3-4), perl-base (= 5.30.3-4), perl-modules-5.30 (= 5.30.3-4), pkg-config (= 0.29.2-1), pkg-kde-tools (= 0.15.32), po-debconf (= 1.0.21), python3 (= 3.8.2-3), python3-minimal (= 3.8.2-3), python3.8 (= 3.8.4~rc1-1), python3.8-minimal (= 3.8.4~rc1-1), readline-common (= 8.0-4), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-3), tar (= 1.30+dfsg-7), util-linux (= 2.35.2-7), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1581788923" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libseqlib-dev_1.1.2+dfsg-6_armhf.deb ------------------------------------ new Debian package, version 2.0. size 164536 bytes: control archive=1744 bytes. 1316 bytes, 24 lines control 1745 bytes, 25 lines md5sums Package: libseqlib-dev Source: libseqlib Version: 1.1.2+dfsg-6 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 779 Depends: libseqlib1 (= 1.1.2+dfsg-6), libfml-dev, libhts-dev, libjsoncpp-dev, libssw-dev, zlib1g-dev, libbwa-dev Section: libdevel Priority: optional Homepage: https://github.com/walaj/SeqLib Description: C++ htslib/bwa-mem/fermi interface for interrogating sequence data (dev) C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment. . This package contains the header files and static library. drwxr-xr-x root/root 0 2020-02-15 17:48 ./ drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/ drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/include/ drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/include/SeqLib/ -rw-r--r-- root/root 3874 2020-02-15 17:48 ./usr/include/SeqLib/BFC.h -rw-r--r-- root/root 6285 2017-05-12 20:31 ./usr/include/SeqLib/BWAWrapper.h -rw-r--r-- root/root 3605 2020-02-15 17:48 ./usr/include/SeqLib/BamHeader.h -rw-r--r-- root/root 8503 2017-05-12 20:31 ./usr/include/SeqLib/BamReader.h -rw-r--r-- root/root 31497 2020-02-15 17:48 ./usr/include/SeqLib/BamRecord.h -rw-r--r-- root/root 1979 2020-02-15 17:48 ./usr/include/SeqLib/BamWalker.h -rw-r--r-- root/root 3096 2017-05-12 20:31 ./usr/include/SeqLib/BamWriter.h -rw-r--r-- root/root 1139 2017-05-12 20:31 ./usr/include/SeqLib/FastqReader.h -rw-r--r-- root/root 4022 2020-02-15 17:48 ./usr/include/SeqLib/FermiAssembler.h -rw-r--r-- root/root 6129 2017-05-12 20:31 ./usr/include/SeqLib/GenomicRegion.h -rw-r--r-- root/root 19701 2017-05-12 20:31 ./usr/include/SeqLib/GenomicRegionCollection.cpp -rw-r--r-- root/root 11804 2017-05-12 20:31 ./usr/include/SeqLib/GenomicRegionCollection.h -rw-r--r-- root/root 7320 2017-05-12 20:31 ./usr/include/SeqLib/IntervalTree.h -rw-r--r-- root/root 17397 2017-05-12 20:31 ./usr/include/SeqLib/ReadFilter.h -rw-r--r-- root/root 1387 2020-02-15 17:48 ./usr/include/SeqLib/RefGenome.h -rw-r--r-- root/root 3832 2017-05-12 20:31 ./usr/include/SeqLib/SeqLibCommon.h -rw-r--r-- root/root 4176 2017-05-12 20:31 ./usr/include/SeqLib/SeqLibUtils.h -rw-r--r-- root/root 2455 2017-05-12 20:31 ./usr/include/SeqLib/SeqPlot.h -rw-r--r-- root/root 1932 2017-05-12 20:31 ./usr/include/SeqLib/UnalignedSequence.h -rw-r--r-- root/root 17078 2017-05-12 20:31 ./usr/include/SeqLib/aho_corasick.hpp drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/lib/ drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/lib/arm-linux-gnueabihf/ -rw-r--r-- root/root 608728 2020-02-15 17:48 ./usr/lib/arm-linux-gnueabihf/libseqlib.a lrwxrwxrwx root/root 0 2020-02-15 17:48 ./usr/lib/arm-linux-gnueabihf/libseqlib.so -> libseqlib.so.1.0.0 drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/lib/arm-linux-gnueabihf/pkgconfig/ -rw-r--r-- root/root 264 2020-02-15 17:48 ./usr/lib/arm-linux-gnueabihf/pkgconfig/libseqlib.pc drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/share/ drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/share/doc/libseqlib-dev/ -rw-r--r-- root/root 1267 2020-02-15 17:48 ./usr/share/doc/libseqlib-dev/changelog.Debian.gz -rw-r--r-- root/root 2441 2020-02-15 14:21 ./usr/share/doc/libseqlib-dev/copyright drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/share/lintian/ drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 145 2020-02-15 16:39 ./usr/share/lintian/overrides/libseqlib-dev libseqlib1-dbgsym_1.1.2+dfsg-6_armhf.deb ---------------------------------------- new Debian package, version 2.0. size 1618820 bytes: control archive=540 bytes. 392 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: libseqlib1-dbgsym Source: libseqlib Version: 1.1.2+dfsg-6 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 1661 Depends: libseqlib1 (= 1.1.2+dfsg-6) Section: debug Priority: optional Description: debug symbols for libseqlib1 Build-Ids: 55683dd59d1b8294979b5a45f0dfdd1253065774 drwxr-xr-x root/root 0 2020-02-15 17:48 ./ drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/ drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/lib/ drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/lib/debug/.build-id/55/ -rw-r--r-- root/root 1690372 2020-02-15 17:48 ./usr/lib/debug/.build-id/55/683dd59d1b8294979b5a45f0dfdd1253065774.debug drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/share/ drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-02-15 17:48 ./usr/share/doc/libseqlib1-dbgsym -> libseqlib1 libseqlib1_1.1.2+dfsg-6_armhf.deb --------------------------------- new Debian package, version 2.0. size 106424 bytes: control archive=5712 bytes. 1290 bytes, 22 lines control 229 bytes, 3 lines md5sums 39 bytes, 1 lines shlibs 44364 bytes, 441 lines symbols 65 bytes, 2 lines triggers Package: libseqlib1 Source: libseqlib Version: 1.1.2+dfsg-6 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 282 Depends: libc6 (>= 2.4), libfml0 (>= 0.1), libgcc-s1 (>= 3.5), libhts3 (>= 1.10), libjsoncpp1 (>= 1.7.4), libssw0 (>= 1.1), libstdc++6 (>= 9), zlib1g (>= 1:1.1.4) Section: libs Priority: optional Homepage: https://github.com/walaj/SeqLib Description: C++ htslib/bwa-mem/fermi interface for interrogating sequence data C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment. drwxr-xr-x root/root 0 2020-02-15 17:48 ./ drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/ drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/lib/ drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/lib/arm-linux-gnueabihf/ lrwxrwxrwx root/root 0 2020-02-15 17:48 ./usr/lib/arm-linux-gnueabihf/libseqlib.so.1 -> libseqlib.so.1.0.0 -rw-r--r-- root/root 226724 2020-02-15 17:48 ./usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/share/ drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-02-15 17:48 ./usr/share/doc/libseqlib1/ -rw-r--r-- root/root 1267 2020-02-15 17:48 ./usr/share/doc/libseqlib1/changelog.Debian.gz -rw-r--r-- root/root 2441 2020-02-15 14:21 ./usr/share/doc/libseqlib1/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [616 B] Get:5 copy:/<>/apt_archive ./ Packages [695 B] Fetched 2274 B in 0s (87.3 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-messagepack-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdynaloader-functions-perl libemail-address-xs-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl libmetrics-any-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtest-metrics-any-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian patchutils t1utils Suggested packages: libxml-parser-perl libdata-dump-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl Recommended packages: gnupg libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-messagepack-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdynaloader-functions-perl libemail-address-xs-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl libmetrics-any-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtest-metrics-any-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian patchutils sbuild-build-depends-lintian-dummy:armhf t1utils 0 upgraded, 75 newly installed, 0 to remove and 0 not upgraded. Need to get 6326 kB of archives. After this operation, 18.7 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.63-1 [35.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.3-7.1 [50.5 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.20-1 [532 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.20-1 [894 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b3 [71.0 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b2 [11.3 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1 [12.6 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b1 [15.9 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b2 [25.6 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1 [12.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b2 [46.0 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.24-1 [18.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b5 [38.4 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1 [15.1 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-tiny-perl all 2.24-1 [16.2 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.19-1 [126 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-messagepack-perl amd64 1.00-2+b2 [38.2 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-domain-perl all 0.10-1 [12.3 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b1 [26.0 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-address-xs-perl amd64 1.04-1+b2 [28.1 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002002-1 [37.8 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1 [7642 B] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.11-1 [8888 B] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1 [317 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.45-1 [84.4 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-4 [13.0 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-2 [90.2 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-5 [105 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.12-1 [12.9 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libmetrics-any-perl all 0.06-1 [41.8 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libtest-metrics-any-perl all 0.01-2 [7060 B] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.77-3 [274 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.8 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-loop-epoll-perl all 0.21-1 [12.1 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004002-1 [13.1 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.53-1 [68.9 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b5 [63.6 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-utilsby-perl all 0.11-1 [15.4 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.004000-1 [59.4 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1 [10.2 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libmouse-perl amd64 2.5.10-1 [173 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b2 [12.0 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1 [13.5 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.114-1 [53.6 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.017+ds-1 [108 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.017+ds-1 [108 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-4+b7 [8696 B] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.8-1 [198 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b2 [75.1 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-1 [39.2 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.010002-1 [338 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b1 [20.2 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-writer-perl all 0.625-1 [29.7 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.82+repack-1 [35.6 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-3 [89.9 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.83.0 [1296 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 6326 kB in 0s (28.8 MB/s) Selecting previously unselected package diffstat. (Reading database ... 21307 files and directories currently installed.) Preparing to unpack .../00-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../01-libassuan0_2.5.3-7.1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7.1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../02-gpgconf_2.2.20-1_amd64.deb ... Unpacking gpgconf (2.2.20-1) ... Selecting previously unselected package gpg. Preparing to unpack .../03-gpg_2.2.20-1_amd64.deb ... Unpacking gpg (2.2.20-1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../04-libapt-pkg-perl_0.1.36+b3_amd64.deb ... Unpacking libapt-pkg-perl (0.1.36+b3) ... Selecting previously unselected package libb-hooks-op-check-perl. Preparing to unpack .../05-libb-hooks-op-check-perl_0.22-1+b2_amd64.deb ... Unpacking libb-hooks-op-check-perl (0.22-1+b2) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../06-libdynaloader-functions-perl_0.003-1_all.deb ... Unpacking libdynaloader-functions-perl (0.003-1) ... Selecting previously unselected package libdevel-callchecker-perl. Preparing to unpack .../07-libdevel-callchecker-perl_0.008-1+b1_amd64.deb ... Unpacking libdevel-callchecker-perl (0.008-1+b1) ... Selecting previously unselected package libparams-classify-perl. Preparing to unpack .../08-libparams-classify-perl_0.015-1+b2_amd64.deb ... Unpacking libparams-classify-perl (0.015-1+b2) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../09-libmodule-runtime-perl_0.016-1_all.deb ... Unpacking libmodule-runtime-perl (0.016-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../10-libtry-tiny-perl_0.30-1_all.deb ... Unpacking libtry-tiny-perl (0.30-1) ... 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Selecting previously unselected package libclass-method-modifiers-perl. Preparing to unpack .../16-libclass-method-modifiers-perl_2.13-1_all.deb ... Unpacking libclass-method-modifiers-perl (2.13-1) ... Selecting previously unselected package libclass-xsaccessor-perl. Preparing to unpack .../17-libclass-xsaccessor-perl_1.19-3+b5_amd64.deb ... Unpacking libclass-xsaccessor-perl (1.19-3+b5) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../18-libclone-perl_0.45-1_amd64.deb ... Unpacking libclone-perl (0.45-1) ... Selecting previously unselected package libconfig-tiny-perl. Preparing to unpack .../19-libconfig-tiny-perl_2.24-1_all.deb ... Unpacking libconfig-tiny-perl (2.24-1) ... Selecting previously unselected package libcpanel-json-xs-perl. Preparing to unpack .../20-libcpanel-json-xs-perl_4.19-1_amd64.deb ... Unpacking libcpanel-json-xs-perl (4.19-1) ... Selecting previously unselected package libdata-messagepack-perl. Preparing to unpack .../21-libdata-messagepack-perl_1.00-2+b2_amd64.deb ... Unpacking libdata-messagepack-perl (1.00-2+b2) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../22-libnet-domain-tld-perl_1.75-1_all.deb ... Unpacking libnet-domain-tld-perl (1.75-1) ... Selecting previously unselected package libdata-validate-domain-perl. Preparing to unpack .../23-libdata-validate-domain-perl_0.10-1_all.deb ... Unpacking libdata-validate-domain-perl (0.10-1) ... Selecting previously unselected package libdevel-size-perl. Preparing to unpack .../24-libdevel-size-perl_0.83-1+b1_amd64.deb ... Unpacking libdevel-size-perl (0.83-1+b1) ... Selecting previously unselected package libemail-address-xs-perl. Preparing to unpack .../25-libemail-address-xs-perl_1.04-1+b2_amd64.deb ... Unpacking libemail-address-xs-perl (1.04-1+b2) ... Selecting previously unselected package libexporter-tiny-perl. Preparing to unpack .../26-libexporter-tiny-perl_1.002002-1_all.deb ... Unpacking libexporter-tiny-perl (1.002002-1) ... Selecting previously unselected package libipc-system-simple-perl. Preparing to unpack .../27-libipc-system-simple-perl_1.30-1_all.deb ... Unpacking libipc-system-simple-perl (1.30-1) ... Selecting previously unselected package libfile-basedir-perl. Preparing to unpack .../28-libfile-basedir-perl_0.08-1_all.deb ... Unpacking libfile-basedir-perl (0.08-1) ... Selecting previously unselected package libnumber-compare-perl. Preparing to unpack .../29-libnumber-compare-perl_0.03-1_all.deb ... Unpacking libnumber-compare-perl (0.03-1) ... Selecting previously unselected package libtext-glob-perl. Preparing to unpack .../30-libtext-glob-perl_0.11-1_all.deb ... Unpacking libtext-glob-perl (0.11-1) ... Selecting previously unselected package libfile-find-rule-perl. Preparing to unpack .../31-libfile-find-rule-perl_0.34-1_all.deb ... Unpacking libfile-find-rule-perl (0.34-1) ... Selecting previously unselected package libfont-ttf-perl. Preparing to unpack .../32-libfont-ttf-perl_1.06-1_all.deb ... Unpacking libfont-ttf-perl (1.06-1) ... Selecting previously unselected package libfuture-perl. Preparing to unpack .../33-libfuture-perl_0.45-1_all.deb ... Unpacking libfuture-perl (0.45-1) ... Selecting previously unselected package libhtml-tagset-perl. Preparing to unpack .../34-libhtml-tagset-perl_3.20-4_all.deb ... Unpacking libhtml-tagset-perl (3.20-4) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../35-liburi-perl_1.76-2_all.deb ... Unpacking liburi-perl (1.76-2) ... Selecting previously unselected package libhtml-parser-perl. Preparing to unpack .../36-libhtml-parser-perl_3.72-5_amd64.deb ... Unpacking libhtml-parser-perl (3.72-5) ... Selecting previously unselected package libimport-into-perl. Preparing to unpack .../37-libimport-into-perl_1.002005-1_all.deb ... Unpacking libimport-into-perl (1.002005-1) ... Selecting previously unselected package libstruct-dumb-perl. Preparing to unpack .../38-libstruct-dumb-perl_0.12-1_all.deb ... Unpacking libstruct-dumb-perl (0.12-1) ... Selecting previously unselected package libmetrics-any-perl. Preparing to unpack .../39-libmetrics-any-perl_0.06-1_all.deb ... Unpacking libmetrics-any-perl (0.06-1) ... Selecting previously unselected package libtest-metrics-any-perl. Preparing to unpack .../40-libtest-metrics-any-perl_0.01-2_all.deb ... Unpacking libtest-metrics-any-perl (0.01-2) ... Selecting previously unselected package libio-async-perl. Preparing to unpack .../41-libio-async-perl_0.77-3_all.deb ... Unpacking libio-async-perl (0.77-3) ... Selecting previously unselected package liblinux-epoll-perl. Preparing to unpack .../42-liblinux-epoll-perl_0.017-1_amd64.deb ... Unpacking liblinux-epoll-perl (0.017-1) ... Selecting previously unselected package libio-async-loop-epoll-perl. 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I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 29456 Build-Time: 80 Distribution: unstable Foreign Architectures: armhf Host Architecture: armhf Install-Time: 28 Job: libseqlib_1.1.2+dfsg-6 Lintian: pass Machine Architecture: amd64 Package: libseqlib Package-Time: 118 Source-Version: 1.1.2+dfsg-6 Space: 29456 Status: successful Version: 1.1.2+dfsg-6 -------------------------------------------------------------------------------- Finished at 2020-07-11T05:17:56Z Build needed 00:01:58, 29456k disk space