sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | libseqlib 1.1.2+dfsg-9 (mipsel) Mon, 02 Nov 2020 11:57:40 +0000 | +==============================================================================+ Package: libseqlib Version: 1.1.2+dfsg-9 Source Version: 1.1.2+dfsg-9 Distribution: unstable Machine Architecture: amd64 Host Architecture: mipsel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-90139618-51e5-4387-9f73-aa74fb4bf095' with '<>' I: NOTICE: Log filtering will replace 'build/libseqlib-EVMQ0k/resolver-N0SMXt' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [5126 B] Ign:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [5126 B] Ign:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index Get:4 http://debian.oregonstate.edu/debian unstable/main mipsel Packages [8176 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources [8957 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 Packages [8481 kB] Fetched 25.8 MB in 10s (2634 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'libseqlib' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libseqlib.git Please use: git clone https://salsa.debian.org/med-team/libseqlib.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 174 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main libseqlib 1.1.2+dfsg-9 (dsc) [2191 B] Get:2 http://debian.oregonstate.edu/debian unstable/main libseqlib 1.1.2+dfsg-9 (tar) [157 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main libseqlib 1.1.2+dfsg-9 (diff) [14.0 kB] Fetched 174 kB in 0s (11.8 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/libseqlib-EVMQ0k/libseqlib-1.1.2+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/libseqlib-EVMQ0k' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, pkg-kde-tools, libhts-dev, libcurl4-gnutls-dev | libcurl4-dev, zlib1g-dev, libfml-dev (>= 0.1-3), libbwa-dev (>= 0.7.15-3), libjsoncpp-dev, libssw-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mipsel:amd64, libc-dev:mipsel, libstdc++-dev:mipsel Filtered Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, pkg-kde-tools, libhts-dev, libcurl4-gnutls-dev, zlib1g-dev, libfml-dev (>= 0.1-3), libbwa-dev (>= 0.7.15-3), libjsoncpp-dev, libssw-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mipsel:amd64, libc-dev:mipsel, libstdc++-dev:mipsel dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [482 B] Get:5 copy:/<>/apt_archive ./ Packages [568 B] Fetched 2007 B in 0s (83.0 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-mipsel-linux-gnu bsdextrautils build-essential cpp-9-mipsel-linux-gnu cpp-mipsel-linux-gnu cross-config crossbuild-essential-mipsel d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-9-mipsel-linux-gnu g++-mipsel-linux-gnu gcc-10-base:mipsel gcc-10-cross-base-mipsen gcc-9-base:mipsel gcc-9-cross-base-mipsen gcc-9-mipsel-linux-gnu gcc-9-mipsel-linux-gnu-base gcc-mipsel-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mipsel libatomic1-mipsel-cross libbrotli1:mipsel libbwa-dev:mipsel libbz2-1.0:mipsel libc6:mipsel libc6-dev libc6-dev:mipsel libc6-dev-mipsel-cross libc6-mipsel-cross libcom-err2:mipsel libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:mipsel libcrypt1:mipsel libcurl3-gnutls:mipsel libcurl4-gnutls-dev:mipsel libdb5.3:mipsel libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:mipsel libdeflate0:mipsel libdpkg-perl libelf1 libexpat1 libffi7:mipsel libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfml-dev:mipsel libfml0:mipsel libgcc-9-dev:mipsel libgcc-9-dev-mipsel-cross libgcc-s1:mipsel libgcc-s1-mipsel-cross libgcrypt20:mipsel libglib2.0-0 libgmp10:mipsel libgnutls30:mipsel libgomp1:mipsel libgomp1-mipsel-cross libgpg-error0:mipsel libgssapi-krb5-2:mipsel libhogweed6:mipsel libhts-dev:mipsel libhts3:mipsel libicu67 libidn2-0:mipsel libio-string-perl libjsoncpp-dev:mipsel libjsoncpp1:mipsel libk5crypto3:mipsel libkeyutils1:mipsel libkrb5-3:mipsel libkrb5support0:mipsel libldap-2.4-2:mipsel liblocale-gettext-perl liblzma-dev:mipsel liblzma5:mipsel libmagic-mgc libmagic1 libnettle8:mipsel libnghttp2-14:mipsel libnsl-dev libnsl-dev:mipsel libnsl2:mipsel libnss-nis:mipsel libnss-nisplus:mipsel libp11-kit0:mipsel libperl5.30 libpipeline1 libpsl5:mipsel libpython3-stdlib libpython3.8-minimal libpython3.8-stdlib libreadline8 librtmp1:mipsel libsasl2-2:mipsel libsasl2-modules-db:mipsel libsigsegv2 libsqlite3-0 libssh2-1:mipsel libssl1.1:mipsel libssw-dev:mipsel libssw0:mipsel libstdc++-10-dev libstdc++-9-dev:mipsel libstdc++-9-dev-mipsel-cross libstdc++6:mipsel libstdc++6-mipsel-cross libsub-override-perl libtasn1-6:mipsel libtirpc-dev libtirpc-dev:mipsel libtirpc3:mipsel libtool libuchardet0 libunistring2:mipsel libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mipsel linux-libc-dev-mipsel-cross m4 man-db mime-support perl perl-modules-5.30 pkg-config pkg-kde-tools po-debconf python3 python3-minimal python3.8 python3.8-minimal readline-common sensible-utils ucf zlib1g:mipsel zlib1g-dev:mipsel Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-9-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-10-multilib gcc-10-doc g++-9-multilib-mipsel-linux-gnu gcc-9-doc gcc-9-multilib-mipsel-linux-gnu manpages-dev flex bison gdb-mipsel-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff samtools:mipsel glibc-doc:mipsel libc-l10n:mipsel locales:mipsel glibc-doc manpages-dev:mipsel libcurl4-doc:mipsel libgnutls28-dev:mipsel libidn11-dev:mipsel libkrb5-dev:mipsel libldap2-dev:mipsel librtmp-dev:mipsel libssh2-1-dev:mipsel gnupg git bzr rng-tools:mipsel gnutls-bin:mipsel krb5-doc:mipsel krb5-user:mipsel liblzma-doc:mipsel libstdc++-10-doc libstdc++-9-doc:mipsel libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl cdbs libmail-box-perl python3-doc python3-tk python3-venv python3.8-venv python3.8-doc binfmt-support readline-doc Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx ca-certificates:mipsel libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpg-error-l10n:mipsel krb5-locales:mipsel libldap-common:mipsel publicsuffix:mipsel libsasl2-modules:mipsel libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-mipsel-linux-gnu bsdextrautils build-essential cpp-9-mipsel-linux-gnu cpp-mipsel-linux-gnu cross-config crossbuild-essential-mipsel d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-9-mipsel-linux-gnu g++-mipsel-linux-gnu gcc-10-base:mipsel gcc-10-cross-base-mipsen gcc-9-base:mipsel gcc-9-cross-base-mipsen gcc-9-mipsel-linux-gnu gcc-9-mipsel-linux-gnu-base gcc-mipsel-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mipsel libatomic1-mipsel-cross libbrotli1:mipsel libbwa-dev:mipsel libbz2-1.0:mipsel libc6:mipsel libc6-dev libc6-dev:mipsel libc6-dev-mipsel-cross libc6-mipsel-cross libcom-err2:mipsel libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:mipsel libcrypt1:mipsel libcurl3-gnutls:mipsel libcurl4-gnutls-dev:mipsel libdb5.3:mipsel libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:mipsel libdeflate0:mipsel libdpkg-perl libelf1 libexpat1 libffi7:mipsel libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfml-dev:mipsel libfml0:mipsel libgcc-9-dev:mipsel libgcc-9-dev-mipsel-cross libgcc-s1:mipsel libgcc-s1-mipsel-cross libgcrypt20:mipsel libglib2.0-0 libgmp10:mipsel libgnutls30:mipsel libgomp1:mipsel libgomp1-mipsel-cross libgpg-error0:mipsel libgssapi-krb5-2:mipsel libhogweed6:mipsel libhts-dev:mipsel libhts3:mipsel libicu67 libidn2-0:mipsel libio-string-perl libjsoncpp-dev:mipsel libjsoncpp1:mipsel libk5crypto3:mipsel libkeyutils1:mipsel libkrb5-3:mipsel libkrb5support0:mipsel libldap-2.4-2:mipsel liblocale-gettext-perl liblzma-dev:mipsel liblzma5:mipsel libmagic-mgc libmagic1 libnettle8:mipsel libnghttp2-14:mipsel libnsl-dev libnsl-dev:mipsel libnsl2:mipsel libnss-nis:mipsel libnss-nisplus:mipsel libp11-kit0:mipsel libperl5.30 libpipeline1 libpsl5:mipsel libpython3-stdlib libpython3.8-minimal libpython3.8-stdlib libreadline8 librtmp1:mipsel libsasl2-2:mipsel libsasl2-modules-db:mipsel libsigsegv2 libsqlite3-0 libssh2-1:mipsel libssl1.1:mipsel libssw-dev:mipsel libssw0:mipsel libstdc++-10-dev libstdc++-9-dev:mipsel libstdc++-9-dev-mipsel-cross libstdc++6:mipsel libstdc++6-mipsel-cross libsub-override-perl libtasn1-6:mipsel libtirpc-dev libtirpc-dev:mipsel libtirpc3:mipsel libtool libuchardet0 libunistring2:mipsel libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mipsel linux-libc-dev-mipsel-cross m4 man-db mime-support perl perl-modules-5.30 pkg-config pkg-kde-tools po-debconf python3 python3-minimal python3.8 python3.8-minimal readline-common sbuild-build-depends-main-dummy:mipsel sensible-utils ucf zlib1g:mipsel zlib1g-dev:mipsel 0 upgraded, 162 newly installed, 0 to remove and 0 not upgraded. Need to get 163 MB of archives. After this operation, 714 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [992 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.36-3+b2 [140 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-5 [920 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.3-2 [1314 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.30 all 5.30.3-4 [2806 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.30 amd64 5.30.3-4 [4019 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.30.3-4 [290 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.8-minimal amd64 3.8.6-1 [761 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.2.10-1 [96.9 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 python3.8-minimal amd64 3.8.6-1 [1863 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 python3-minimal amd64 3.8.6-1 [37.7 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 mime-support all 3.64 [37.8 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-4 [72.5 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-4 [160 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.33.0-1 [790 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.8-stdlib amd64 3.8.6-1 [1720 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 python3.8 amd64 3.8.6-1 [422 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3-stdlib amd64 3.8.6-1 [20.9 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 python3 amd64 3.8.6-1 [64.0 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main mipsel gcc-10-base mipsel 10.2.0-16 [200 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main mipsel gcc-9-base mipsel 9.3.0-18 [197 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-5 [262 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-5 [120 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-5 [67.9 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.2-4 [801 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mipsel-linux-gnu amd64 2.35-1cross1 [2352 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.17-1 [104 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.2.6-3 [190 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.31-4 [2344 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev amd64 10.2.0-16 [1738 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10 amd64 10.2.0-16 [69.1 MB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:10.2.0-1 [1644 B] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.5 [1473 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.5 [1909 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-mipsel-linux-gnu-base amd64 9.3.0-8cross1 [196 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-mipsel-linux-gnu amd64 9.3.0-8cross1 [6465 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mipsel-linux-gnu amd64 4:9.2.1-4.1 [16.7 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3.1 [39.9 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base-mipsen all 9.3.0-8cross1 [192 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base-mipsen all 10.2.0-5cross1 [195 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mipsel-cross all 2.31-2cross1 [1212 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-mipsel-cross all 10.2.0-5cross1 [46.6 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mipsel-cross all 10.2.0-5cross1 [91.1 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mipsel-cross all 10.2.0-5cross1 [6640 B] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-mipsel-cross all 9.3.0-8cross1 [223 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-mipsel-linux-gnu amd64 9.3.0-8cross1 [6819 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mipsel-linux-gnu amd64 4:9.2.1-4.1 [1460 B] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mipsel-cross all 10.2.0-5cross1 [395 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mipsel-cross all 5.7.10-1cross1 [1237 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mipsel-cross all 2.31-2cross1 [2074 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-mipsel-cross all 9.3.0-8cross1 [1708 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-mipsel-linux-gnu amd64 9.3.0-8cross1 [7051 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mipsel-linux-gnu amd64 4:9.2.1-4.1 [1176 B] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-4 [8624 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-6.2 [692 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3.1 [38.9 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3.1 [49.9 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mipsel all 12.8 [6684 B] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 d-shlibs all 0.95 [17.8 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.2.1 [188 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.9.0-1 [15.2 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.181-1 [164 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.66.2-1 [1363 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.2.1 [1007 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main mipsel libgcc-s1 mipsel 10.2.0-16 [46.3 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main mipsel libcrypt1 mipsel 1:4.4.17-1 [111 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main mipsel libcom-err2 mipsel 1.45.6-1 [71.4 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main mipsel libkrb5support0 mipsel 1.17-10 [63.9 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main mipsel libk5crypto3 mipsel 1.17-10 [120 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main mipsel libkeyutils1 mipsel 1.6.1-2 [14.9 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main mipsel libssl1.1 mipsel 1.1.1h-1 [1188 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main mipsel libkrb5-3 mipsel 1.17-10 [339 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main mipsel libgssapi-krb5-2 mipsel 1.17-10 [141 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main mipsel libtirpc3 mipsel 1.2.6-3 [73.7 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main mipsel libnsl2 mipsel 1.3.0-2 [35.2 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main mipsel libnss-nis mipsel 3.1-4 [22.4 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main mipsel libnss-nisplus mipsel 1.3-4 [18.9 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main mipsel libc6 mipsel 2.31-4 [2414 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main mipsel libatomic1 mipsel 10.2.0-16 [6704 B] Get:114 http://debian.oregonstate.edu/debian unstable/main mipsel libbrotli1 mipsel 1.0.9-2+b1 [280 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main mipsel libbwa-dev mipsel 0.7.17-5 [179 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main mipsel libbz2-1.0 mipsel 1.0.8-4 [46.1 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main mipsel linux-libc-dev mipsel 5.9.1-1 [1189 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main mipsel libcrypt-dev mipsel 1:4.4.17-1 [132 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main mipsel libtirpc-dev mipsel 1.2.6-3 [197 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main mipsel libnsl-dev mipsel 1.3.0-2 [69.1 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main mipsel libc6-dev mipsel 2.31-4 [2009 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main mipsel libgmp10 mipsel 2:6.2.0+dfsg-6 [225 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main mipsel libnettle8 mipsel 3.6-2 [260 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main mipsel libhogweed6 mipsel 3.6-2 [305 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main mipsel libunistring2 mipsel 0.9.10-4 [369 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main mipsel libidn2-0 mipsel 2.3.0-2 [84.2 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main mipsel libffi7 mipsel 3.3-4 [20.1 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main mipsel libp11-kit0 mipsel 0.23.21-2 [279 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main mipsel libtasn1-6 mipsel 4.16.0-2 [53.4 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main mipsel libgnutls30 mipsel 3.6.15-4 [1041 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main mipsel libdb5.3 mipsel 5.3.28+dfsg1-0.6 [598 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main mipsel libsasl2-modules-db mipsel 2.1.27+dfsg-2 [68.2 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main mipsel libsasl2-2 mipsel 2.1.27+dfsg-2 [101 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main mipsel libldap-2.4-2 mipsel 2.4.55+dfsg-1 [210 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main mipsel libnghttp2-14 mipsel 1.41.0-3 [70.3 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main mipsel libpsl5 mipsel 0.21.0-1.1 [55.0 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main mipsel zlib1g mipsel 1:1.2.11.dfsg-2 [88.2 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main mipsel librtmp1 mipsel 2.4+20151223.gitfa8646d.1-2+b2 [55.7 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main mipsel libgpg-error0 mipsel 1.38-2 [74.9 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main mipsel libgcrypt20 mipsel 1.8.7-2 [542 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main mipsel libssh2-1 mipsel 1.8.0-2.1 [134 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main mipsel libcurl3-gnutls mipsel 7.72.0-1 [315 kB] Get:143 http://debian.oregonstate.edu/debian unstable/main mipsel libcurl4-gnutls-dev mipsel 7.72.0-1 [438 kB] Get:144 http://debian.oregonstate.edu/debian unstable/main mipsel libdeflate0 mipsel 1.6-1 [49.3 kB] Get:145 http://debian.oregonstate.edu/debian unstable/main mipsel libdeflate-dev mipsel 1.6-1 [44.5 kB] Get:146 http://debian.oregonstate.edu/debian unstable/main mipsel libfml0 mipsel 0.1-13 [83.1 kB] Get:147 http://debian.oregonstate.edu/debian unstable/main mipsel zlib1g-dev mipsel 1:1.2.11.dfsg-2 [190 kB] Get:148 http://debian.oregonstate.edu/debian unstable/main mipsel libfml-dev mipsel 0.1-13 [99.6 kB] Get:149 http://debian.oregonstate.edu/debian unstable/main mipsel libgomp1 mipsel 10.2.0-16 [93.0 kB] Get:150 http://debian.oregonstate.edu/debian unstable/main mipsel libgcc-9-dev mipsel 9.3.0-18 [222 kB] Get:151 http://debian.oregonstate.edu/debian unstable/main mipsel liblzma5 mipsel 5.2.4-1+b1 [153 kB] Get:152 http://debian.oregonstate.edu/debian unstable/main mipsel libhts3 mipsel 1.11-2 [357 kB] Get:153 http://debian.oregonstate.edu/debian unstable/main mipsel liblzma-dev mipsel 5.2.4-1+b1 [215 kB] Get:154 http://debian.oregonstate.edu/debian unstable/main mipsel libhts-dev mipsel 1.11-2 [3833 kB] Get:155 http://debian.oregonstate.edu/debian unstable/main mipsel libstdc++6 mipsel 10.2.0-16 [436 kB] Get:156 http://debian.oregonstate.edu/debian unstable/main mipsel libjsoncpp1 mipsel 1.7.4-3.1 [72.1 kB] Get:157 http://debian.oregonstate.edu/debian unstable/main mipsel libjsoncpp-dev mipsel 1.7.4-3.1 [98.8 kB] Get:158 http://debian.oregonstate.edu/debian unstable/main mipsel libssw0 mipsel 1.1-11+b1 [26.3 kB] Get:159 http://debian.oregonstate.edu/debian unstable/main mipsel libssw-dev mipsel 1.1-11+b1 [30.6 kB] Get:160 http://debian.oregonstate.edu/debian unstable/main mipsel libstdc++-9-dev mipsel 9.3.0-18 [1717 kB] Get:161 http://debian.oregonstate.edu/debian unstable/main amd64 pkg-config amd64 0.29.2-1 [65.1 kB] Get:162 http://debian.oregonstate.edu/debian unstable/main amd64 pkg-kde-tools all 0.15.32 [96.7 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 163 MB in 2s (87.4 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10484 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36-3+b2_amd64.deb ... Unpacking bsdextrautils (2.36-3+b2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../01-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-5_amd64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../03-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.3-2_amd64.deb ... Unpacking man-db (2.9.3-2) ... Selecting previously unselected package perl-modules-5.30. Preparing to unpack .../05-perl-modules-5.30_5.30.3-4_all.deb ... Unpacking perl-modules-5.30 (5.30.3-4) ... 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Setting up libpython3.8-minimal:amd64 (3.8.6-1) ... Setting up libexpat1:amd64 (2.2.10-1) ... Setting up python3.8-minimal (3.8.6-1) ... Selecting previously unselected package python3-minimal. (Reading database ... 13277 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.8.6-1_amd64.deb ... Unpacking python3-minimal (3.8.6-1) ... Selecting previously unselected package mime-support. Preparing to unpack .../1-mime-support_3.64_all.deb ... Unpacking mime-support (3.64) ... Selecting previously unselected package readline-common. Preparing to unpack .../2-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../3-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../4-libsqlite3-0_3.33.0-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.33.0-1) ... 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Unpacking libstdc++-10-dev:amd64 (10.2.0-16) ... Selecting previously unselected package g++-10. Preparing to unpack .../021-g++-10_10.2.0-16_amd64.deb ... Unpacking g++-10 (10.2.0-16) ... Selecting previously unselected package g++. Preparing to unpack .../022-g++_4%3a10.2.0-1_amd64.deb ... Unpacking g++ (4:10.2.0-1) ... Selecting previously unselected package libdpkg-perl. Preparing to unpack .../023-libdpkg-perl_1.20.5_all.deb ... Unpacking libdpkg-perl (1.20.5) ... Selecting previously unselected package dpkg-dev. Preparing to unpack .../024-dpkg-dev_1.20.5_all.deb ... Unpacking dpkg-dev (1.20.5) ... Selecting previously unselected package build-essential. Preparing to unpack .../025-build-essential_12.8_amd64.deb ... Unpacking build-essential (12.8) ... Selecting previously unselected package gcc-9-mipsel-linux-gnu-base:amd64. Preparing to unpack .../026-gcc-9-mipsel-linux-gnu-base_9.3.0-8cross1_amd64.deb ... Unpacking gcc-9-mipsel-linux-gnu-base:amd64 (9.3.0-8cross1) ... 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Selecting previously unselected package gcc-9-mipsel-linux-gnu. Preparing to unpack .../037-gcc-9-mipsel-linux-gnu_9.3.0-8cross1_amd64.deb ... Unpacking gcc-9-mipsel-linux-gnu (9.3.0-8cross1) ... Selecting previously unselected package gcc-mipsel-linux-gnu. Preparing to unpack .../038-gcc-mipsel-linux-gnu_4%3a9.2.1-4.1_amd64.deb ... Unpacking gcc-mipsel-linux-gnu (4:9.2.1-4.1) ... Selecting previously unselected package libstdc++6-mipsel-cross. Preparing to unpack .../039-libstdc++6-mipsel-cross_10.2.0-5cross1_all.deb ... Unpacking libstdc++6-mipsel-cross (10.2.0-5cross1) ... Selecting previously unselected package linux-libc-dev-mipsel-cross. Preparing to unpack .../040-linux-libc-dev-mipsel-cross_5.7.10-1cross1_all.deb ... Unpacking linux-libc-dev-mipsel-cross (5.7.10-1cross1) ... Selecting previously unselected package libc6-dev-mipsel-cross. Preparing to unpack .../041-libc6-dev-mipsel-cross_2.31-2cross1_all.deb ... Unpacking libc6-dev-mipsel-cross (2.31-2cross1) ... 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Preparing to unpack .../140-pkg-kde-tools_0.15.32_all.deb ... Unpacking pkg-kde-tools (0.15.32) ... Selecting previously unselected package sbuild-build-depends-main-dummy:mipsel. Preparing to unpack .../141-sbuild-build-depends-main-dummy_0.invalid.0_mipsel.deb ... Unpacking sbuild-build-depends-main-dummy:mipsel (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libpipeline1:amd64 (1.5.3-1) ... Setting up perl-modules-5.30 (5.30.3-4) ... Setting up mime-support (3.64) ... Setting up bsdextrautils (2.36-3+b2) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-4) ... Setting up libmagic-mgc (1:5.38-5) ... Setting up libglib2.0-0:amd64 (2.66.2-1) ... No schema files found: doing nothing. Setting up libsqlite3-0:amd64 (3.33.0-1) ... Setting up libmagic1:amd64 (1:5.38-5) ... Setting up linux-libc-dev:mipsel (5.9.1-1) ... Setting up libc6-mipsel-cross (2.31-2cross1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.38-5) ... Setting up gcc-9-cross-base-mipsen (9.3.0-8cross1) ... Setting up gcc-9-mipsel-linux-gnu-base:amd64 (9.3.0-8cross1) ... Setting up gcc-10-base:mipsel (10.2.0-16) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3.1) ... Setting up libtirpc-dev:amd64 (1.2.6-3) ... Setting up gcc-10-cross-base-mipsen (10.2.0-5cross1) ... Setting up binutils-mipsel-linux-gnu (2.35-1cross1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libgomp1-mipsel-cross (10.2.0-5cross1) ... Setting up autopoint (0.19.8.1-10) ... Setting up d-shlibs (0.95) ... Setting up libbwa-dev:mipsel (0.7.17-5) ... Setting up cpp-9-mipsel-linux-gnu (9.3.0-8cross1) ... Setting up linux-libc-dev-mipsel-cross (5.7.10-1cross1) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.17-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libperl5.30:amd64 (5.30.3-4) ... Setting up libc6-dev:amd64 (2.31-4) ... Setting up libelf1:amd64 (0.181-1) ... Setting up readline-common (8.0-4) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.2) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up gcc-9-base:mipsel (9.3.0-18) ... Setting up libstdc++-10-dev:amd64 (10.2.0-16) ... Setting up g++-10 (10.2.0-16) ... Setting up libc6-dev-mipsel-cross (2.31-2cross1) ... Setting up libtool (2.4.6-14) ... Setting up libgcc-s1-mipsel-cross (10.2.0-5cross1) ... Setting up libreadline8:amd64 (8.0-4) ... Setting up m4 (1.4.18-4) ... Setting up libatomic1-mipsel-cross (10.2.0-5cross1) ... Setting up perl (5.30.3-4) ... Setting up libgcc-9-dev-mipsel-cross (9.3.0-8cross1) ... Setting up cpp-mipsel-linux-gnu (4:9.2.1-4.1) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.5) ... Setting up autoconf (2.69-11.1) ... Setting up g++ (4:10.2.0-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up libsub-override-perl (0.09-2) ... Setting up libpython3.8-stdlib:amd64 (3.8.6-1) ... Setting up python3.8 (3.8.6-1) ... Setting up libpython3-stdlib:amd64 (3.8.6-1) ... Setting up automake (1:1.16.2-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gcc-9-mipsel-linux-gnu (9.3.0-8cross1) ... Setting up libfile-which-perl (1.23-1) ... Setting up gettext (0.19.8.1-10) ... Setting up libstdc++6-mipsel-cross (10.2.0-5cross1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.2.1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up python3 (3.8.6-1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.20.5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up gcc-mipsel-linux-gnu (4:9.2.1-4.1) ... Setting up pkg-config (0.29.2-1) ... Setting up pkg-kde-tools (0.15.32) ... Setting up build-essential (12.8) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up libstdc++-9-dev-mipsel-cross (9.3.0-8cross1) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up po-debconf (1.0.21) ... Setting up g++-9-mipsel-linux-gnu (9.3.0-8cross1) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-mipsel-linux-gnu (4:9.2.1-4.1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3.1) ... Setting up dpkg-cross (2.6.15-3.1) ... Setting up crossbuild-essential-mipsel (12.8) ... Setting up libcrypt1:mipsel (1:4.4.17-1) ... Setting up libgcc-s1:mipsel (10.2.0-16) ... Setting up libcrypt-dev:mipsel (1:4.4.17-1) ... Setting up libtirpc3:mipsel (1.2.6-3) ... Setting up dh-autoreconf (19) ... Setting up libtirpc-dev:mipsel (1.2.6-3) ... Setting up libnsl2:mipsel (1.3.0-2) ... Setting up debhelper (13.2.1) ... Setting up libnss-nisplus:mipsel (1.3-4) ... Setting up libnss-nis:mipsel (3.1-4) ... Setting up libc6:mipsel (2.31-4) ... Setting up libnsl-dev:mipsel (1.3.0-2) ... Setting up libtasn1-6:mipsel (4.16.0-2) ... Setting up libc6-dev:mipsel (2.31-4) ... Setting up libbz2-1.0:mipsel (1.0.8-4) ... Setting up libdb5.3:mipsel (5.3.28+dfsg1-0.6) ... Setting up libstdc++6:mipsel (10.2.0-16) ... Setting up libjsoncpp1:mipsel (1.7.4-3.1) ... Setting up libjsoncpp-dev:mipsel (1.7.4-3.1) ... Setting up libkeyutils1:mipsel (1.6.1-2) ... Setting up liblzma5:mipsel (5.2.4-1+b1) ... Setting up libgpg-error0:mipsel (1.38-2) ... Setting up libssl1.1:mipsel (1.1.1h-1) ... Setting up libbrotli1:mipsel (1.0.9-2+b1) ... Setting up libffi7:mipsel (3.3-4) ... Setting up libnghttp2-14:mipsel (1.41.0-3) ... Setting up libunistring2:mipsel (0.9.10-4) ... Setting up libdeflate0:mipsel (1.6-1) ... Setting up libgcrypt20:mipsel (1.8.7-2) ... Setting up zlib1g:mipsel (1:1.2.11.dfsg-2) ... Setting up libidn2-0:mipsel (2.3.0-2) ... Setting up libcom-err2:mipsel (1.45.6-1) ... Setting up libgomp1:mipsel (10.2.0-16) ... Setting up libkrb5support0:mipsel (1.17-10) ... Setting up libsasl2-modules-db:mipsel (2.1.27+dfsg-2) ... Setting up libnettle8:mipsel (3.6-2) ... Setting up libgmp10:mipsel (2:6.2.0+dfsg-6) ... Setting up libp11-kit0:mipsel (0.23.21-2) ... Setting up libatomic1:mipsel (10.2.0-16) ... Setting up libk5crypto3:mipsel (1.17-10) ... Setting up libsasl2-2:mipsel (2.1.27+dfsg-2) ... Setting up liblzma-dev:mipsel (5.2.4-1+b1) ... Setting up zlib1g-dev:mipsel (1:1.2.11.dfsg-2) ... Setting up libssh2-1:mipsel (1.8.0-2.1) ... Setting up libkrb5-3:mipsel (1.17-10) ... Setting up libdeflate-dev:mipsel (1.6-1) ... Setting up libssw0:mipsel (1.1-11+b1) ... Setting up libpsl5:mipsel (0.21.0-1.1) ... Setting up libhogweed6:mipsel (3.6-2) ... Setting up libssw-dev:mipsel (1.1-11+b1) ... Setting up libfml0:mipsel (0.1-13) ... Setting up libgcc-9-dev:mipsel (9.3.0-18) ... Setting up libgnutls30:mipsel (3.6.15-4) ... Setting up librtmp1:mipsel (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libgssapi-krb5-2:mipsel (1.17-10) ... Setting up libfml-dev:mipsel (0.1-13) ... Setting up libstdc++-9-dev:mipsel (9.3.0-18) ... Setting up libldap-2.4-2:mipsel (2.4.55+dfsg-1) ... Setting up libcurl3-gnutls:mipsel (7.72.0-1) ... Setting up libcurl4-gnutls-dev:mipsel (7.72.0-1) ... Setting up libhts3:mipsel (1.11-2) ... Setting up libhts-dev:mipsel (1.11-2) ... Setting up sbuild-build-depends-main-dummy:mipsel (0.invalid.0) ... Processing triggers for libc-bin (2.31-4) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mipsel included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-12-amd64 #1 SMP Debian 4.19.152-1 (2020-10-18) amd64 (x86_64) Toolchain package versions: binutils_2.35.1-2 dpkg-dev_1.20.5 g++-10_10.2.0-16 gcc-10_10.2.0-16 libc6-dev_2.31-4 libstdc++-10-dev_10.2.0-16 libstdc++-9-dev_9.3.0-18 libstdc++-9-dev-mipsel-cross_9.3.0-8cross1 libstdc++6_10.2.0-16 libstdc++6-mipsel-cross_10.2.0-5cross1 linux-libc-dev_5.9.1-1 Package versions: adduser_3.118 apt_2.1.11 autoconf_2.69-11.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.48 bash_5.1~rc1-2 binutils_2.35.1-2 binutils-common_2.35.1-2 binutils-mipsel-linux-gnu_2.35-1cross1 binutils-x86-64-linux-gnu_2.35.1-2 bsdextrautils_2.36-3+b2 bsdutils_1:2.36-3+b2 build-essential_12.8 bzip2_1.0.8-4 coreutils_8.32-4+b1 cpp_4:10.2.0-1 cpp-10_10.2.0-16 cpp-8_8.4.0-4 cpp-9-mipsel-linux-gnu_9.3.0-8cross1 cpp-mipsel-linux-gnu_4:9.2.1-4.1 cross-config_2.6.15-3.1 crossbuild-essential-mipsel_12.8 d-shlibs_0.95 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2.1 debian-archive-keyring_2019.1 debianutils_4.11.2 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dpkg_1.20.5 dpkg-cross_2.6.15-3.1 dpkg-dev_1.20.5 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1 fdisk_2.36-3+b2 file_1:5.38-5 findutils_4.7.0+git20201010-2 g++_4:10.2.0-1 g++-10_10.2.0-16 g++-9-mipsel-linux-gnu_9.3.0-8cross1 g++-mipsel-linux-gnu_4:9.2.1-4.1 gcc_4:10.2.0-1 gcc-10_10.2.0-16 gcc-10-base_10.2.0-16 gcc-10-cross-base-mipsen_10.2.0-5cross1 gcc-8-base_8.4.0-4 gcc-9-base_9.3.0-18 gcc-9-cross-base-mipsen_9.3.0-8cross1 gcc-9-mipsel-linux-gnu_9.3.0-8cross1 gcc-9-mipsel-linux-gnu-base_9.3.0-8cross1 gcc-mipsel-linux-gnu_4:9.2.1-4.1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.1.11 libarchive-zip-perl_1.68-1 libasan5_9.3.0-18 libasan6_10.2.0-16 libatomic1_10.2.0-16 libatomic1-mipsel-cross_10.2.0-5cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3.1 libaudit1_1:2.8.5-3.1 libbinutils_2.35.1-2 libblkid1_2.36-3+b2 libbrotli1_1.0.9-2+b1 libbwa-dev_0.7.17-5 libbz2-1.0_1.0.8-4 libc-bin_2.31-4 libc-dev-bin_2.31-4 libc6_2.31-4 libc6-dev_2.31-4 libc6-dev-mipsel-cross_2.31-2cross1 libc6-mipsel-cross_2.31-2cross1 libcap-ng0_0.7.9-2.2 libcc1-0_10.2.0-16 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000003-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-2 libctf0_2.35.1-2 libcurl3-gnutls_7.72.0-1 libcurl4-gnutls-dev_7.72.0-1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.255 libdebhelper-perl_13.2.1 libdebian-dpkgcross-perl_2.6.15-3.1 libdeflate-dev_1.6-1 libdeflate0_1.6-1 libdpkg-perl_1.20.5 libelf1_0.181-1 libexpat1_2.2.10-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1 libfdisk1_2.36-3+b2 libffi6_3.2.1-9 libffi7_3.3-4 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.9.0-1 libfile-which-perl_1.23-1 libfml-dev_0.1-13 libfml0_0.1-13 libgcc-10-dev_10.2.0-16 libgcc-9-dev_9.3.0-18 libgcc-9-dev-mipsel-cross_9.3.0-8cross1 libgcc-s1_10.2.0-16 libgcc-s1-mipsel-cross_10.2.0-5cross1 libgcrypt20_1.8.7-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libglib2.0-0_2.66.2-1 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.15-4 libgomp1_10.2.0-16 libgomp1-mipsel-cross_10.2.0-5cross1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.17-10 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.6-2 libhts-dev_1.11-2 libhts3_1.11-2 libicu67_67.1-4 libidn2-0_2.3.0-2 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 libitm1_10.2.0-16 libjsoncpp-dev_1.7.4-3.1 libjsoncpp1_1.7.4-3.1 libk5crypto3_1.17-10 libkeyutils1_1.6.1-2 libkrb5-3_1.17-10 libkrb5support0_1.17-10 libldap-2.4-2_2.4.55+dfsg-1 liblocale-gettext-perl_1.07-4 liblsan0_10.2.0-16 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1+b1 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.36-3+b2 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libmpx2_8.4.0-4 libncursesw6_6.2+20200918-1 libnettle6_3.5.1+really3.4.1-1 libnettle8_3.6-2 libnghttp2-14_1.41.0-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnss-nis_3.1-4 libnss-nisplus_1.3-4 libp11-kit0_0.23.21-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.28_5.28.1-6 libperl5.30_5.30.3-4 libpipeline1_1.5.3-1 libpsl5_0.21.0-1.1 libpython3-stdlib_3.8.6-1 libpython3.8-minimal_3.8.6-1 libpython3.8-stdlib_3.8.6-1 libquadmath0_10.2.0-16 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libxml2_2.9.10+dfsg-6.2 libyaml-perl_1.30-1 libzstd1_1.4.5+dfsg-4 linux-libc-dev_5.9.1-1 linux-libc-dev-mipsel-cross_5.7.10-1cross1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mime-support_3.64 mount_2.36-3+b2 ncurses-base_6.2+20200918-1 ncurses-bin_6.2+20200918-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.3-4 pkg-config_0.29.2-1 pkg-kde-tools_0.15.32 po-debconf_1.0.21 python3_3.8.6-1 python3-minimal_3.8.6-1 python3.8_3.8.6-1 python3.8-minimal_3.8.6-1 readline-common_8.0-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-5 tar_1.30+dfsg-7 tzdata_2020d-1 ucf_3.0043 util-linux_2.36-3+b2 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libseqlib Binary: libseqlib1, libseqlib-dev Architecture: any Version: 1.1.2+dfsg-9 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/walaj/SeqLib Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/libseqlib Vcs-Git: https://salsa.debian.org/med-team/libseqlib.git Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, pkg-kde-tools, libhts-dev, libcurl4-gnutls-dev | libcurl4-dev, zlib1g-dev, libfml-dev (>= 0.1-3), libbwa-dev (>= 0.7.15-3), libjsoncpp-dev, libssw-dev Package-List: libseqlib-dev deb libdevel optional arch=any libseqlib1 deb libs optional arch=any Checksums-Sha1: e15777412aa1cb70c9e80b66080490da425d399c 157400 libseqlib_1.1.2+dfsg.orig.tar.xz b365abb083905ccd841a546f5c4b63173aa8bf65 14024 libseqlib_1.1.2+dfsg-9.debian.tar.xz Checksums-Sha256: fda571050683e015dba119d6946b41287107a210166c9b4575ed5fba3070500e 157400 libseqlib_1.1.2+dfsg.orig.tar.xz ebc4d373f874c3c1815ca01030f937fb734419fabe034aaf2d4f09bbc2665b78 14024 libseqlib_1.1.2+dfsg-9.debian.tar.xz Files: 0387f983d524a719183d9257a021c2f4 157400 libseqlib_1.1.2+dfsg.orig.tar.xz a5c700c7218371da2f575469212dc7fe 14024 libseqlib_1.1.2+dfsg-9.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAl+W8LYACgkQPCZ2P2xn 5uImVw//ToWJiDHqYUtlm5PG/lrxofolQQaeeWX9CwH6knp/EMnC3LaApaD3RbQW Gt+6O3bBx7Z2+k02ksU/wc3eBwHImZFw2FwiwWJIHmIECb5Vj8M2RInPEX+zexGN 7VAfE5Oglh+mEO5nlDdGRF203YNiLgpWVDpgn44RQs/k95CXGIER9LvId9lUny1m EnRWp4cyVQYXRwp1CP/GmVApp/Mh3pEDzwdZDW8ktWpAt3x8EcorcDDONa6f6TRE lESBe8MTEmUs/ik/1YMd3NUbIL1w6Ymm5AMZVDju+G1sK5Wux09Sv7DPVqFOp1Fu jx8JSzRZnfM4zN1I6Xavv1bagfAdJUpJe6qNa8gGlx33HPlOyWvqE5Dov4CjFwmp HJD2+lq7MSwcN6XPpIukcOIjONceaKTi3I/3snLlbNIvzwtY+DUXXLAH9fRvV9CO JO7l3VbkfuuCIot+tDB885gU5+HKKKhiGAtEpoUzxzJqk337CWAvZC1BXTeF1nso ClCJF3IzGwE26LjJjWD3Q5PVefy+AfqqHXg0HCQ9phyNvlBj+g1SXGlafW+iHblH 0fBh58EQgFALn+fMlkzZCQnJGCsxbusWYmtFQMWvepV3yC+isG10w0RQR9yj6HHt MHDiowBnYeng3A9J8iaZyq5m1dA3Yo5ez6iHqfBkNhFZa9qsPqA= =attb -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.e45PgZKk/trustedkeys.kbx': General error gpgv: Signature made Mon Oct 26 15:52:22 2020 UTC gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libseqlib_1.1.2+dfsg-9.dsc dpkg-source: info: extracting libseqlib in /<> dpkg-source: info: unpacking libseqlib_1.1.2+dfsg.orig.tar.xz dpkg-source: info: unpacking libseqlib_1.1.2+dfsg-9.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_libs.patch dpkg-source: info: applying adapt_to_debian_fermi-lite.patch dpkg-source: info: applying fix_fermi-lite_usage.patch dpkg-source: info: applying fix_htslib_usage.patch dpkg-source: info: applying fml_include_path.patch dpkg-source: info: applying dynamic_lib.patch dpkg-source: info: applying use_debian_packaged_jsoncpp.patch dpkg-source: info: applying use_debian_packaged_ssw.patch dpkg-source: info: applying pkg-config.patch dpkg-source: info: applying fix_private_htslib_usage.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mipsel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-90139618-51e5-4387-9f73-aa74fb4bf095 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -amipsel -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package libseqlib dpkg-buildpackage: info: source version 1.1.2+dfsg-9 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-architecture: warning: specified GNU system type mipsel-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mipsel debian/rules clean dh clean --with pkgkde_symbolshelper dh_clean debian/rules binary-arch dh binary-arch --with pkgkde_symbolshelper dh_update_autotools_config -a dh_autoreconf -a libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac, libtoolize: and rerunning libtoolize and aclocal. libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am. libtoolize: 'AC_PROG_RANLIB' is rendered obsolete by 'LT_INIT' configure.ac:17: installing './compile' configure.ac:19: installing './config.guess' configure.ac:19: installing './config.sub' configure.ac:4: installing './missing' src/Makefile.am: installing './depcomp' dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/mipsel-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=mipsel-linux-gnu configure: loading site script /etc/dpkg-cross/cross-config.mipsel checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for mipsel-linux-gnu-strip... mipsel-linux-gnu-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for mipsel-linux-gnu-g++... mipsel-linux-gnu-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether mipsel-linux-gnu-g++ accepts -g... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of mipsel-linux-gnu-g++... none checking for mipsel-linux-gnu-gcc... mipsel-linux-gnu-gcc checking whether we are using the GNU C compiler... yes checking whether mipsel-linux-gnu-gcc accepts -g... yes checking for mipsel-linux-gnu-gcc option to accept ISO C89... none needed checking whether mipsel-linux-gnu-gcc understands -c and -o together... yes checking dependency style of mipsel-linux-gnu-gcc... none checking for mipsel-linux-gnu-ranlib... mipsel-linux-gnu-ranlib checking build system type... x86_64-pc-linux-gnu checking host system type... mipsel-unknown-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by mipsel-linux-gnu-gcc... /usr/mipsel-linux-gnu/bin/ld checking if the linker (/usr/mipsel-linux-gnu/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/mipsel-linux-gnu-nm -B checking the name lister (/usr/bin/mipsel-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to mipsel-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/mipsel-linux-gnu/bin/ld option to reload object files... -r checking for mipsel-linux-gnu-objdump... mipsel-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for mipsel-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for mipsel-linux-gnu-ar... mipsel-linux-gnu-ar checking for archiver @FILE support... @ checking for mipsel-linux-gnu-strip... (cached) mipsel-linux-gnu-strip checking for mipsel-linux-gnu-ranlib... (cached) mipsel-linux-gnu-ranlib checking command to parse /usr/bin/mipsel-linux-gnu-nm -B output from mipsel-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mipsel-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... mipsel-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mipsel-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for mipsel-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if mipsel-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if mipsel-linux-gnu-gcc static flag -static works... yes checking if mipsel-linux-gnu-gcc supports -c -o file.o... yes checking if mipsel-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the mipsel-linux-gnu-gcc linker (/usr/mipsel-linux-gnu/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... mipsel-linux-gnu-g++ -E checking for ld used by mipsel-linux-gnu-g++... /usr/mipsel-linux-gnu/bin/ld checking if the linker (/usr/mipsel-linux-gnu/bin/ld) is GNU ld... yes checking whether the mipsel-linux-gnu-g++ linker (/usr/mipsel-linux-gnu/bin/ld) supports shared libraries... yes checking for mipsel-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if mipsel-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if mipsel-linux-gnu-g++ static flag -static works... yes checking if mipsel-linux-gnu-g++ supports -c -o file.o... yes checking if mipsel-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the mipsel-linux-gnu-g++ linker (/usr/mipsel-linux-gnu/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking zlib.h usability... yes checking zlib.h presence... yes checking for zlib.h... yes checking for library containing gzopen... -lz checking for library containing clock_gettime... none required checking for mipsel-linux-gnu-pkg-config... /usr/bin/mipsel-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for htslib... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/seqtools/Makefile config.status: creating libseqlib.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in src make[3]: Entering directory '/<>/src' /bin/bash ../libtool --tag=CXX --mode=compile mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/mipsel-linux-gnu-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-FastqReader.lo `test -f 'FastqReader.cpp' || echo './'`FastqReader.cpp libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c FastqReader.cpp -fPIC -DPIC -o .libs/libseqlib_la-FastqReader.o libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare 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.libs/libseqlib_la-BFC.o libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BFC.cpp -o libseqlib_la-BFC.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/mipsel-linux-gnu-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-ReadFilter.lo `test -f 'ReadFilter.cpp' || echo './'`ReadFilter.cpp libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare 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'SeqPlot.cpp' || echo './'`SeqPlot.cpp libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c SeqPlot.cpp -fPIC -DPIC -o .libs/libseqlib_la-SeqPlot.o libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c SeqPlot.cpp -o libseqlib_la-SeqPlot.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/mipsel-linux-gnu-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-GenomicRegion.lo `test -f 'GenomicRegion.cpp' || echo './'`GenomicRegion.cpp libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c GenomicRegion.cpp -fPIC -DPIC -o .libs/libseqlib_la-GenomicRegion.o libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c GenomicRegion.cpp -o libseqlib_la-GenomicRegion.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/mipsel-linux-gnu-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-RefGenome.lo `test -f 'RefGenome.cpp' || echo './'`RefGenome.cpp libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c RefGenome.cpp -fPIC -DPIC -o .libs/libseqlib_la-RefGenome.o libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c RefGenome.cpp -o libseqlib_la-RefGenome.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/mipsel-linux-gnu-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BamWriter.lo `test -f 'BamWriter.cpp' || echo './'`BamWriter.cpp libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamWriter.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamWriter.o libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamWriter.cpp -o libseqlib_la-BamWriter.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/mipsel-linux-gnu-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BamReader.lo `test -f 'BamReader.cpp' || echo './'`BamReader.cpp libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamReader.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamReader.o libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamReader.cpp -o libseqlib_la-BamReader.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/mipsel-linux-gnu-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BWAWrapper.lo `test -f 'BWAWrapper.cpp' || echo './'`BWAWrapper.cpp libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BWAWrapper.cpp -fPIC -DPIC -o .libs/libseqlib_la-BWAWrapper.o libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BWAWrapper.cpp -o libseqlib_la-BWAWrapper.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/mipsel-linux-gnu-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BamRecord.lo `test -f 'BamRecord.cpp' || echo './'`BamRecord.cpp libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamRecord.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamRecord.o libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamRecord.cpp -o libseqlib_la-BamRecord.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/mipsel-linux-gnu-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-FermiAssembler.lo `test -f 'FermiAssembler.cpp' || echo './'`FermiAssembler.cpp libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c FermiAssembler.cpp -fPIC -DPIC -o .libs/libseqlib_la-FermiAssembler.o libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c FermiAssembler.cpp -o libseqlib_la-FermiAssembler.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/mipsel-linux-gnu-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BamHeader.lo `test -f 'BamHeader.cpp' || echo './'`BamHeader.cpp libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamHeader.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamHeader.o libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamHeader.cpp -o libseqlib_la-BamHeader.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link mipsel-linux-gnu-g++ -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 1:0 -lfml `/usr/bin/mipsel-linux-gnu-pkg-config --libs htslib` `/usr/bin/mipsel-linux-gnu-pkg-config --libs jsoncpp` -lssw -Wl,-z,relro -Wl,-z,now -o libseqlib.la -rpath /usr/lib/mipsel-linux-gnu libseqlib_la-FastqReader.lo libseqlib_la-BFC.lo libseqlib_la-ReadFilter.lo libseqlib_la-SeqPlot.lo libseqlib_la-GenomicRegion.lo libseqlib_la-RefGenome.lo libseqlib_la-BamWriter.lo libseqlib_la-BamReader.lo libseqlib_la-BWAWrapper.lo libseqlib_la-BamRecord.lo libseqlib_la-FermiAssembler.lo libseqlib_la-BamHeader.lo -lz -pthread libtool: link: mipsel-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc-cross/mipsel-linux-gnu/9/../../../../mipsel-linux-gnu/lib/../lib/crti.o /usr/lib/gcc-cross/mipsel-linux-gnu/9/crtbeginS.o .libs/libseqlib_la-FastqReader.o .libs/libseqlib_la-BFC.o .libs/libseqlib_la-ReadFilter.o .libs/libseqlib_la-SeqPlot.o .libs/libseqlib_la-GenomicRegion.o .libs/libseqlib_la-RefGenome.o .libs/libseqlib_la-BamWriter.o .libs/libseqlib_la-BamReader.o .libs/libseqlib_la-BWAWrapper.o .libs/libseqlib_la-BamRecord.o .libs/libseqlib_la-FermiAssembler.o .libs/libseqlib_la-BamHeader.o -lfml -L/usr/lib/mipsel-linux-gnu -lhts -ljsoncpp -lssw -lz -L/usr/lib/gcc-cross/mipsel-linux-gnu/9 -L/usr/lib/gcc-cross/mipsel-linux-gnu/9/../../../../mipsel-linux-gnu/lib/../lib -L/lib/mipsel-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc-cross/mipsel-linux-gnu/9/../../../../mipsel-linux-gnu/lib -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc-cross/mipsel-linux-gnu/9/crtendS.o /usr/lib/gcc-cross/mipsel-linux-gnu/9/../../../../mipsel-linux-gnu/lib/../lib/crtn.o -g -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -pthread -pthread -Wl,-soname -Wl,libseqlib.so.1 -o .libs/libseqlib.so.1.0.0 libtool: link: (cd ".libs" && rm -f "libseqlib.so.1" && ln -s "libseqlib.so.1.0.0" "libseqlib.so.1") libtool: link: (cd ".libs" && rm -f "libseqlib.so" && ln -s "libseqlib.so.1.0.0" "libseqlib.so") libtool: link: mipsel-linux-gnu-ar cr .libs/libseqlib.a libseqlib_la-FastqReader.o libseqlib_la-BFC.o libseqlib_la-ReadFilter.o libseqlib_la-SeqPlot.o libseqlib_la-GenomicRegion.o libseqlib_la-RefGenome.o libseqlib_la-BamWriter.o libseqlib_la-BamReader.o libseqlib_la-BWAWrapper.o libseqlib_la-BamRecord.o libseqlib_la-FermiAssembler.o libseqlib_la-BamHeader.o libtool: link: mipsel-linux-gnu-ranlib .libs/libseqlib.a libtool: link: ( cd ".libs" && rm -f "libseqlib.la" && ln -s "../libseqlib.la" "libseqlib.la" ) make[3]: Leaving directory '/<>/src' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/libseqlib-1.1.2\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' echo "mkdir -p bin && cp src/libseqlib.a fermi-lite/libfml.a bwa/libbwa.a htslib/libhts.a bin" mkdir -p bin && cp src/libseqlib.a fermi-lite/libfml.a bwa/libbwa.a htslib/libhts.a bin make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install # Trick to get also headers moved by d-shlibmove cp -a SeqLib debian # note: also GenomicRegionCollection.cpp is really needed by freebayes d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/SeqLib usr/include \ --override s/libfml0-dev/libfml-dev/ \ --override s/libssw0-dev/libssw-dev/ \ src/.libs/libseqlib.so Library package automatic movement utility --> libfml-dev package exists. --> libhts-dev package exists. --> libjsoncpp-dev package exists. --> libssw-dev package exists. --> zlib1g-dev package exists. set -e install -d -m 755 debian/libseqlib-dev/usr/lib/mipsel-linux-gnu install -d -m 755 debian/libseqlib1/usr/lib/mipsel-linux-gnu mv src/.libs/libseqlib.a debian/libseqlib-dev/usr/lib/mipsel-linux-gnu mv src/.libs/libseqlib.so debian/libseqlib-dev/usr/lib/mipsel-linux-gnu mv /<>/src/.libs/libseqlib.so.1 debian/libseqlib1/usr/lib/mipsel-linux-gnu mv /<>/src/.libs/libseqlib.so.1.0.0 debian/libseqlib1/usr/lib/mipsel-linux-gnu PKGDEV=libseqlib-dev PKGSHL=libseqlib1 install -d -m 755 debian/libseqlib-dev/usr/include mv debian/SeqLib debian/libseqlib-dev/usr/include mkdir -p /<>/debian/libseqlib-dev/usr/lib/mipsel-linux-gnu/pkgconfig mv libseqlib.pc /<>/debian/libseqlib-dev/usr/lib/mipsel-linux-gnu/pkgconfig make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_lintian -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a -a dh_strip -a -a mipsel-linux-gnu-objcopy: debian/.debhelper/libseqlib1/dbgsym-root/usr/lib/debug/.build-id/0e/2fe73d6de00b4a8df5f47361a07f38d9f610d9.debug: section `.note.gnu.build-id' can't be allocated in segment 0 LOAD: .MIPS.abiflags .reginfo .note.gnu.build-id .dynamic .hash .dynsym .dynstr .gnu.version .gnu.version_r .rel.dyn .init .text .MIPS.stubs .fini .rodata .eh_frame_hdr .eh_frame dh_makeshlibs -a -a dpkg-gensymbols: warning: some new symbols appeared in the symbols file: see diff output below dpkg-gensymbols: error: some symbols or patterns disappeared in the symbols file: see diff output below dpkg-gensymbols: warning: debian/libseqlib1/DEBIAN/symbols doesn't match completely debian/libseqlib1.symbols --- debian/libseqlib1.symbols (libseqlib1_1.1.2+dfsg-9_mipsel) +++ dpkg-gensymbolsQnvMmy 2020-11-02 11:59:54.321460318 +0000 @@ -65,6 +65,9 @@ (optional=templinst)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE13CreateTreeMapEv@Base 1.1.2 (optional=templinst)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE14CoordinateSortEv@Base 1.1.2 (optional=templinst)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE25MergeOverlappingIntervalsEv@Base 1.1.2 + _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE6ConcatERKS2_@Base 1.1.2+dfsg-9 + _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE7ReadBEDERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.2+dfsg-9 + _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE7ReadVCFERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.2+dfsg-9 (optional=templinst)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEEC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.2 (optional=templinst)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEEC1Ev@Base 1.1.2 (optional=templinst)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEEC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.2 @@ -82,8 +85,8 @@ _ZN6SeqLib4_Bam20open_BAM_for_readingEv@Base 1.1.2 _ZN6SeqLib4_Bam9SetRegionERKNS_13GenomicRegionE@Base 1.1.2 _ZN6SeqLib4_Bam9load_readERNS_9BamRecordE@Base 1.1.2 - _ZN6SeqLib4_BamC1ERKS0_@Base 1.1.2 - _ZN6SeqLib4_BamC2ERKS0_@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# _ZN6SeqLib4_BamC1ERKS0_@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# _ZN6SeqLib4_BamC2ERKS0_@Base 1.1.2 _ZN6SeqLib4_BamD1Ev@Base 1.1.2 _ZN6SeqLib4_BamD2Ev@Base 1.1.2 _ZN6SeqLib5CigarC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2 @@ -105,9 +108,9 @@ _ZN6SeqLib6Filter12AbstractRule7isValidERKNS_9BamRecordE@Base 1.1.2 _ZN6SeqLib6Filter12AbstractRule9parseJsonERKN4Json5ValueE@Base 1.1.2 _ZN6SeqLib6Filter12AbstractRuleC1ERKS1_@Base 1.1.2 - _ZN6SeqLib6Filter12AbstractRuleC1Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# _ZN6SeqLib6Filter12AbstractRuleC1Ev@Base 1.1.2 _ZN6SeqLib6Filter12AbstractRuleC2ERKS1_@Base 1.1.2 - _ZN6SeqLib6Filter12AbstractRuleC2Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# _ZN6SeqLib6Filter12AbstractRuleC2Ev@Base 1.1.2 _ZN6SeqLib6Filter12AbstractRuleD1Ev@Base 1.1.2 _ZN6SeqLib6Filter12AbstractRuleD2Ev@Base 1.1.2 _ZN6SeqLib6Filter15convert_to_boolERKN4Json5ValueERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2 @@ -116,7 +119,7 @@ _ZN6SeqLib6Filter20ReadFilterCollectionC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.2 _ZN6SeqLib6Filter20ReadFilterCollectionC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.1.2 _ZN6SeqLib6Filter4Flag9parseJsonERKN4Json5ValueERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2 - _ZN6SeqLib6Filter5Range7isValidEi@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# _ZN6SeqLib6Filter5Range7isValidEi@Base 1.1.2 _ZN6SeqLib6Filter5Range9parseJsonERKN4Json5ValueERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2 _ZN6SeqLib6Filter8FlagRule14parse_json_intERKN4Json5ValueE@Base 1.1.2 _ZN6SeqLib6Filter8FlagRule7isValidERKNS_9BamRecordE@Base 1.1.2 @@ -128,7 +131,7 @@ _ZN6SeqLib6FilterlsERSoRKNS0_8FlagRuleE@Base 1.1.2 (optional=templinst)_ZN6SeqLib8tostringIiEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEET_@Base 1.1.2 (optional=templinst)_ZN6SeqLib8tostringIjEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEET_@Base 1.1.2 - (optional=templinst)_ZN6SeqLib9AddCommasIiEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEET_@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst)_ZN6SeqLib9AddCommasIiEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEET_@Base 1.1.2 _ZN6SeqLib9BamHeader21ConstructName2IDTableEv@Base 1.1.2 _ZN6SeqLib9BamHeaderC1EPK9sam_hdr_t@Base 1.1.2 _ZN6SeqLib9BamHeaderC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2 @@ -175,7 +178,7 @@ _ZN6SeqLiblsERSoRKNS_10BWAWrapperE@Base 1.1.2 _ZN6SeqLiblsERSoRKNS_10CigarFieldE@Base 1.1.2 _ZN6SeqLiblsERSoRKNS_13GenomicRegionE@Base 1.1.2 - _ZN6SeqLiblsERSoRKNS_15PlottedReadLineE@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# _ZN6SeqLiblsERSoRKNS_15PlottedReadLineE@Base 1.1.2 _ZN6SeqLiblsERSoRKNS_5CigarE@Base 1.1.2 _ZN6SeqLiblsERSoRKNS_9BamReaderE@Base 1.1.2 _ZN6SeqLiblsERSoRKNS_9BamRecordE@Base 1.1.2 @@ -227,7 +230,7 @@ _ZNK6SeqLib9BamRecord11CountNBasesEv@Base 1.1.2 _ZNK6SeqLib9BamRecord11PositionEndEv@Base 1.1.2 _ZNK6SeqLib9BamRecord14GetSmartIntTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.1.2 - _ZNK6SeqLib9BamRecord14ParseReadGroupB5cxx11Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# _ZNK6SeqLib9BamRecord14ParseReadGroupB5cxx11Ev@Base 1.1.2 _ZNK6SeqLib9BamRecord15AsGenomicRegionEv@Base 1.1.2 _ZNK6SeqLib9BamRecord15PairOrientationEv@Base 1.1.2 _ZNK6SeqLib9BamRecord15PositionEndMateEv@Base 1.1.2 @@ -250,33 +253,42 @@ (optional=templinst)_ZNKSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE5countERS7_@Base 1.1.2 (optional=templinst|subst)_ZNKSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEE19_M_find_before_nodeE{size_t}RS7_{size_t}@Base 1.1.2 (optional=templinst)_ZNKSt5ctypeIcE8do_widenEc@Base 1.1.2 - (optional=templinst)_ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE12_Scoped_nodeD1Ev@Base 1.1.2 - (optional=templinst)_ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE12_Scoped_nodeD2Ev@Base 1.1.2 + _ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE10_M_emplaceIJS6_IS5_S9_EEEES6_INSC_14_Node_iteratorISA_Lb0ELb1EEEbESt17integral_constantIbLb1EEDpOT_@Base 1.1.2+dfsg-9 +#MISSING: 1.1.2+dfsg-9# (optional=templinst)_ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE12_Scoped_nodeD1Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst)_ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE12_Scoped_nodeD2Ev@Base 1.1.2 + _ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE21_M_insert_unique_nodeEjjPNSC_10_Hash_nodeISA_Lb1EEEj@Base 1.1.2+dfsg-9 + _ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE9_M_rehashEjRKj@Base 1.1.2+dfsg-9 (optional=templinst|arch=kfreebsd-amd64)_ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEE10_M_emplaceIJS6_IS5_iEEEES6_INSA_14_Node_iteratorIS8_Lb0ELb1EEEbESt17integral_constantIbLb1EEDpOT_@Base 1.1.2 - (optional=templinst)_ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEE5clearEv@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst)_ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEE5clearEv@Base 1.1.2 (optional=templinst|subst)_ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEE9_M_rehashE{size_t}RK{size_t}@Base 1.1.2 + _ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEED1Ev@Base 1.1.2+dfsg-9 + _ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEED2Ev@Base 1.1.2+dfsg-9 + _ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIijEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEED1Ev@Base 1.1.2+dfsg-9 + _ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIijEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEED2Ev@Base 1.1.2+dfsg-9 (optional=templinst|arch=kfreebsd-amd64|subst)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIi{size_t}EEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE10_M_emplaceIJS0_IiS4_EEEES0_INS7_14_Node_iteratorIS5_Lb0ELb0EEEbESt17integral_constantIbLb1EEDpOT_@Base 1.1.2 - (optional=templinst|subst)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIi{size_t}EEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE12_Scoped_nodeD1Ev@Base 1.1.2 - (optional=templinst|subst)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIi{size_t}EEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE12_Scoped_nodeD2Ev@Base 1.1.2 - (optional=templinst|subst)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIi{size_t}EEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE4findERS1_@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst|subst)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIi{size_t}EEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE12_Scoped_nodeD1Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst|subst)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIi{size_t}EEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE12_Scoped_nodeD2Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst|subst)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIi{size_t}EEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE4findERS1_@Base 1.1.2 (optional=templinst|subst)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIi{size_t}EEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE5clearEv@Base 1.1.2 (optional=templinst|subst)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIi{size_t}EEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE9_M_rehashE{size_t}RK{size_t}@Base 1.1.2 - (optional=templinst|subst)_ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIi{size_t}EESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEE5clearEv@Base 1.1.2 + _ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIijEESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEED1Ev@Base 1.1.2+dfsg-9 + _ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIijEESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEED2Ev@Base 1.1.2+dfsg-9 +#MISSING: 1.1.2+dfsg-9# (optional=templinst|subst)_ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIi{size_t}EESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEE5clearEv@Base 1.1.2 (optional=templinst|subst)_ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIi{size_t}EESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEE9_M_rehashE{size_t}RK{size_t}@Base 1.1.2 (optional=templinst)_ZNSt11_Deque_baseIPN12aho_corasick5stateIcEESaIS3_EED1Ev@Base 1.1.2 (optional=templinst)_ZNSt11_Deque_baseIPN12aho_corasick5stateIcEESaIS3_EED2Ev@Base 1.1.2 - (optional=templinst)_ZNSt12_Vector_baseIN12aho_corasick7ahoemitIcEESaIS2_EED1Ev@Base 1.1.2 - (optional=templinst)_ZNSt12_Vector_baseIN12aho_corasick7ahoemitIcEESaIS2_EED2Ev@Base 1.1.2 - (optional=templinst)_ZNSt12_Vector_baseIN6SeqLib10CigarFieldESaIS1_EED1Ev@Base 1.1.2 - (optional=templinst)_ZNSt12_Vector_baseIN6SeqLib10CigarFieldESaIS1_EED2Ev@Base 1.1.2 - (optional=templinst|subst)_ZNSt12_Vector_baseIN6SeqLib9TIntervalIi{size_t}EESaIS2_EED1Ev@Base 1.1.2 - (optional=templinst|subst)_ZNSt12_Vector_baseIN6SeqLib9TIntervalIi{size_t}EESaIS2_EED2Ev@Base 1.1.2 - (optional=templinst)_ZNSt12_Vector_baseIPN12aho_corasick5stateIcEESaIS3_EED1Ev@Base 1.1.2 - (optional=templinst)_ZNSt12_Vector_baseIPN12aho_corasick5stateIcEESaIS3_EED2Ev@Base 1.1.2 - (optional=templinst)_ZNSt12_Vector_baseIPN6SeqLib11PlottedReadESaIS2_EED1Ev@Base 1.1.2 - (optional=templinst)_ZNSt12_Vector_baseIPN6SeqLib11PlottedReadESaIS2_EED2Ev@Base 1.1.2 - (optional=templinst)_ZNSt12_Vector_baseIcSaIcEED1Ev@Base 1.1.2 - (optional=templinst)_ZNSt12_Vector_baseIcSaIcEED2Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst)_ZNSt12_Vector_baseIN12aho_corasick7ahoemitIcEESaIS2_EED1Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst)_ZNSt12_Vector_baseIN12aho_corasick7ahoemitIcEESaIS2_EED2Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst)_ZNSt12_Vector_baseIN6SeqLib10CigarFieldESaIS1_EED1Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst)_ZNSt12_Vector_baseIN6SeqLib10CigarFieldESaIS1_EED2Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst|subst)_ZNSt12_Vector_baseIN6SeqLib9TIntervalIi{size_t}EESaIS2_EED1Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst|subst)_ZNSt12_Vector_baseIN6SeqLib9TIntervalIi{size_t}EESaIS2_EED2Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst)_ZNSt12_Vector_baseIPN12aho_corasick5stateIcEESaIS3_EED1Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst)_ZNSt12_Vector_baseIPN12aho_corasick5stateIcEESaIS3_EED2Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst)_ZNSt12_Vector_baseIPN6SeqLib11PlottedReadESaIS2_EED1Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst)_ZNSt12_Vector_baseIPN6SeqLib11PlottedReadESaIS2_EED2Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst)_ZNSt12_Vector_baseIcSaIcEED1Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst)_ZNSt12_Vector_baseIcSaIcEED2Ev@Base 1.1.2 (optional=templinst|arch=armel riscv64)_ZNSt15_Sp_counted_ptrIDnLN9__gnu_cxx12_Lock_policyE1EE10_M_disposeEv@Base 1.1.2 (optional=templinst|arch=!armel !riscv64)_ZNSt15_Sp_counted_ptrIDnLN9__gnu_cxx12_Lock_policyE2EE10_M_disposeEv@Base 1.1.2 (optional=templinst|arch=armel riscv64)_ZNSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE1EE10_M_destroyEv@Base 1.1.2 @@ -367,12 +379,12 @@ (optional=templinst|arch=armel riscv64)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EED0Ev@Base 1.1.2 (optional=templinst|arch=armel riscv64)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EED1Ev@Base 1.1.2 (optional=templinst|arch=armel riscv64)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EED2Ev@Base 1.1.2 - (optional=templinst|arch=amd64)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE10_M_destroyEv@Base 1.1.2 - (optional=templinst|arch=amd64)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE10_M_disposeEv@Base 1.1.2 - (optional=templinst|arch=amd64)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE14_M_get_deleterERKSt9type_info@Base 1.1.2 - (optional=templinst|arch=amd64)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EED0Ev@Base 1.1.2 - (optional=templinst|arch=amd64)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EED1Ev@Base 1.1.2 - (optional=templinst|arch=amd64)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EED2Ev@Base 1.1.2 + (optional=templinst)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE10_M_destroyEv@Base 1.1.2 + (optional=templinst)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE10_M_disposeEv@Base 1.1.2 + (optional=templinst)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE14_M_get_deleterERKSt9type_info@Base 1.1.2 + (optional=templinst)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EED0Ev@Base 1.1.2 + (optional=templinst)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EED1Ev@Base 1.1.2 + (optional=templinst)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EED2Ev@Base 1.1.2 (optional=templinst|arch=armel riscv64)_ZNSt19_Sp_counted_deleterIP9hts_itr_t14hts_itr_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EE10_M_destroyEv@Base 1.1.2 (optional=templinst|arch=armel riscv64)_ZNSt19_Sp_counted_deleterIP9hts_itr_t14hts_itr_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EE10_M_disposeEv@Base 1.1.2 (optional=templinst|arch=armel riscv64)_ZNSt19_Sp_counted_deleterIP9hts_itr_t14hts_itr_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EE14_M_get_deleterERKSt9type_info@Base 1.1.2 @@ -397,67 +409,101 @@ (optional=templinst|arch=!armel !riscv64)_ZNSt19_Sp_counted_deleterIP9sam_hdr_t14bam_hdr_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EED0Ev@Base 1.1.2 (optional=templinst|arch=!armel !riscv64)_ZNSt19_Sp_counted_deleterIP9sam_hdr_t14bam_hdr_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EED1Ev@Base 1.1.2 (optional=templinst|arch=!armel !riscv64)_ZNSt19_Sp_counted_deleterIP9sam_hdr_t14bam_hdr_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EED2Ev@Base 1.1.2 + _ZNSt4pairIKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEN6SeqLib4_BamEED1Ev@Base 1.1.2+dfsg-9 + _ZNSt4pairIKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEN6SeqLib4_BamEED2Ev@Base 1.1.2+dfsg-9 + _ZNSt4pairINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEN6SeqLib4_BamEED1Ev@Base 1.1.2+dfsg-9 + _ZNSt4pairINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEN6SeqLib4_BamEED2Ev@Base 1.1.2+dfsg-9 (optional=templinst)_ZNSt5dequeIPN12aho_corasick5stateIcEESaIS3_EE16_M_push_back_auxIJRKS3_EEEvDpOT_@Base 1.1.2 (optional=templinst)_ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 1.1.2 - (optional=templinst)_ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EE17_M_realloc_insertIJS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst)_ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EE17_M_realloc_insertIJS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 1.1.2 (optional=templinst)_ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EE8_M_eraseEN9__gnu_cxx17__normal_iteratorIPS2_S4_EE@Base 1.1.2 + _ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EE9push_backERKS2_@Base 1.1.2+dfsg-9 (optional=templinst)_ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EEC1ERKS4_@Base 1.1.2 (optional=templinst)_ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EEC2ERKS4_@Base 1.1.2 (optional=templinst)_ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EED1Ev@Base 1.1.2 (optional=templinst)_ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EED2Ev@Base 1.1.2 (optional=templinst)_ZNSt6vectorIN6SeqLib10CigarFieldESaIS1_EE17_M_realloc_insertIJRKS1_EEEvN9__gnu_cxx17__normal_iteratorIPS1_S3_EEDpOT_@Base 1.1.2 (optional=templinst)_ZNSt6vectorIN6SeqLib11PlottedReadESaIS1_EE17_M_realloc_insertIJS1_EEEvN9__gnu_cxx17__normal_iteratorIPS1_S3_EEDpOT_@Base 1.1.2 + _ZNSt6vectorIN6SeqLib13GenomicRegionESaIS1_EE15_M_range_insertIN9__gnu_cxx17__normal_iteratorIPS1_S3_EEEEvS8_T_S9_St20forward_iterator_tag@Base 1.1.2+dfsg-9 + _ZNSt6vectorIN6SeqLib13GenomicRegionESaIS1_EE15_M_range_insertISt14_List_iteratorIS1_EEEvN9__gnu_cxx17__normal_iteratorIPS1_S3_EET_SB_St20forward_iterator_tag@Base 1.1.2+dfsg-9 (optional=templinst)_ZNSt6vectorIN6SeqLib13GenomicRegionESaIS1_EE17_M_realloc_insertIJRKS1_EEEvN9__gnu_cxx17__normal_iteratorIPS1_S3_EEDpOT_@Base 1.1.2 (optional=templinst)_ZNSt6vectorIN6SeqLib13GenomicRegionESaIS1_EE17_M_realloc_insertIJS1_EEEvN9__gnu_cxx17__normal_iteratorIPS1_S3_EEDpOT_@Base 1.1.2 (optional=templinst)_ZNSt6vectorIN6SeqLib14HeaderSequenceESaIS1_EE17_M_realloc_insertIJS1_EEEvN9__gnu_cxx17__normal_iteratorIPS1_S3_EEDpOT_@Base 1.1.2 (optional=templinst)_ZNSt6vectorIN6SeqLib15PlottedReadLineESaIS1_EE17_M_realloc_insertIJRKS1_EEEvN9__gnu_cxx17__normal_iteratorIPS1_S3_EEDpOT_@Base 1.1.2 (optional=templinst)_ZNSt6vectorIN6SeqLib17UnalignedSequenceESaIS1_EE17_M_realloc_insertIJRKS1_EEEvN9__gnu_cxx17__normal_iteratorIPS1_S3_EEDpOT_@Base 1.1.2 - (optional=templinst)_ZNSt6vectorIN6SeqLib17UnalignedSequenceESaIS1_EED1Ev@Base 1.1.2 - (optional=templinst)_ZNSt6vectorIN6SeqLib17UnalignedSequenceESaIS1_EED2Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst)_ZNSt6vectorIN6SeqLib17UnalignedSequenceESaIS1_EED1Ev@Base 1.1.2 +#MISSING: 1.1.2+dfsg-9# (optional=templinst)_ZNSt6vectorIN6SeqLib17UnalignedSequenceESaIS1_EED2Ev@Base 1.1.2 (optional=templinst)_ZNSt6vectorIN6SeqLib6Filter10ReadFilterESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 1.1.2 (optional=templinst)_ZNSt6vectorIN6SeqLib6Filter12AbstractRuleESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 1.1.2 (optional=templinst)_ZNSt6vectorIN6SeqLib9BamRecordESaIS1_EE17_M_realloc_insertIJRKS1_EEEvN9__gnu_cxx17__normal_iteratorIPS1_S3_EEDpOT_@Base 1.1.2 - (optional=templinst|arch=armel armhf i386 m68k mipsel powerpc sh4 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1.1.2 + (optional=templinst)_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE12emplace_backIJS5_EEEvDpOT_@Base 1.1.2 (optional=templinst)_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_@Base 1.1.2 (optional=templinst)_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_@Base 1.1.2 (optional=templinst)_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED1Ev@Base 1.1.2 (optional=templinst)_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED2Ev@Base 1.1.2 (optional=templinst)_ZNSt6vectorIPN12aho_corasick5stateIcEESaIS3_EE17_M_realloc_insertIJS3_EEEvN9__gnu_cxx17__normal_iteratorIPS3_S5_EEDpOT_@Base 1.1.2 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(optional=templinst)_ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEOS8_S9_@Base 1.1.2 dh_makeshlibs: error: failing due to earlier errors make: *** [debian/rules:10: binary-arch] Error 25 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2020-11-02T11:59:54Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 28972 Build-Time: 79 Distribution: unstable Fail-Stage: build Foreign Architectures: mipsel Host Architecture: mipsel Install-Time: 33 Job: libseqlib_1.1.2+dfsg-9 Machine Architecture: amd64 Package: libseqlib Package-Time: 134 Source-Version: 1.1.2+dfsg-9 Space: 28972 Status: attempted Version: 1.1.2+dfsg-9 -------------------------------------------------------------------------------- Finished at 2020-11-02T11:59:54Z Build needed 00:02:14, 28972k disk space