sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | libseqlib 1.2.0+dfsg-11 (armhf) Thu, 10 Jul 2025 02:52:16 +0000 | +==============================================================================+ Package: libseqlib Version: 1.2.0+dfsg-11 Source Version: 1.2.0+dfsg-11 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-822718ef-ce39-4c01-a82e-794f22158eba' with '<>' I: NOTICE: Log filtering will replace 'build/libseqlib-6R14iw/resolver-tyeF12' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian unstable InRelease [213 kB] Get:2 http://localhost:3142/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian unstable/main Sources T-2025-07-10-0204.42-F-2025-07-10-0204.42.pdiff [2145 B] Get:4 http://localhost:3142/debian unstable/main Sources T-2025-07-10-0204.42-F-2025-07-10-0204.42.pdiff [2145 B] Get:5 http://localhost:3142/debian unstable/main amd64 Packages T-2025-07-10-0204.42-F-2025-07-10-0204.42.pdiff [1234 B] Get:5 http://localhost:3142/debian unstable/main amd64 Packages T-2025-07-10-0204.42-F-2025-07-10-0204.42.pdiff [1234 B] Get:6 http://localhost:3142/debian unstable/main armhf Packages [9612 kB] Fetched 9955 kB in 3s (2942 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'libseqlib' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libseqlib.git Please use: git clone https://salsa.debian.org/med-team/libseqlib.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 167 kB of source archives. Get:1 http://localhost:3142/debian unstable/main libseqlib 1.2.0+dfsg-11 (dsc) [2401 B] Get:2 http://localhost:3142/debian unstable/main libseqlib 1.2.0+dfsg-11 (tar) [149 kB] Get:3 http://localhost:3142/debian unstable/main libseqlib 1.2.0+dfsg-11 (diff) [15.5 kB] Fetched 167 kB in 0s (415 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/libseqlib-6R14iw/libseqlib-1.2.0+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/libseqlib-6R14iw' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, pkg-kde-tools, libhts-dev, libcurl4-gnutls-dev | libcurl4-dev, zlib1g-dev, libfml-dev (>= 0.1+git20190320.b499514), libbwa-dev, libjsoncpp-dev, libssw-dev, libbz2-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf Filtered Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, pkg-kde-tools, libhts-dev, libcurl4-gnutls-dev, zlib1g-dev, libfml-dev (>= 0.1+git20190320.b499514), libbwa-dev, libjsoncpp-dev, libssw-dev, libbz2-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf dpkg-deb: warning: root directory /<>/sbuild-build-depends-main-dummy has unusual owner or group 1000:119 dpkg-deb: hint: you might need to pass --root-owner-group, see for further details dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [904 B] Get:5 copy:/<>/apt_archive ./ Packages [933 B] Fetched 2446 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils comerr-dev:armhf cpp-14-arm-linux-gnueabihf cpp-arm-linux-gnueabihf crossbuild-essential-armhf d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-14-arm-linux-gnueabihf gcc-14-arm-linux-gnueabihf-base gcc-14-base:armhf gcc-14-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian krb5-multidev:armhf libarchive-zip-perl libasan8:armhf libasan8-armhf-cross libatomic1:armhf libatomic1-armhf-cross libbrotli-dev:armhf libbrotli1:armhf libbwa-dev:armhf libbz2-1.0:armhf libbz2-dev:armhf libc6:armhf libc6-armhf-cross libc6-dev:armhf libc6-dev-armhf-cross libcom-err2:armhf libcrypt-dev:armhf libcrypt1:armhf libcurl3t64-gnutls:armhf libcurl4-gnutls-dev:armhf libdb5.3t64:armhf libdebhelper-perl libdeflate-dev:armhf libdeflate0:armhf libelf1t64 libevent-2.1-7t64:armhf libexpat1 libfakeroot libffi8 libffi8:armhf libfile-stripnondeterminism-perl libfml-dev:armhf libfml0:armhf libgcc-14-dev:armhf libgcc-14-dev-armhf-cross libgcc-s1:armhf libgcc-s1-armhf-cross libgmp-dev:armhf libgmp10:armhf libgmpxx4ldbl:armhf libgnutls-dane0t64:armhf libgnutls-openssl27t64:armhf libgnutls28-dev:armhf libgnutls30t64:armhf libgomp1:armhf libgomp1-armhf-cross libgssapi-krb5-2:armhf libgssrpc4t64:armhf libhogweed6t64:armhf libhts-dev:armhf libhts3t64:armhf libhtscodecs2:armhf libidn2-0:armhf libidn2-dev:armhf libjsoncpp-dev:armhf libjsoncpp26:armhf libk5crypto3:armhf libkadm5clnt-mit12:armhf libkadm5srv-mit12:armhf libkdb5-10t64:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5-dev:armhf libkrb5support0:armhf libldap-dev:armhf libldap2:armhf liblzma-dev:armhf liblzma5:armhf libmagic-mgc libmagic1t64 libncursesw6 libnettle8t64:armhf libnghttp2-14:armhf libnghttp2-dev:armhf libnghttp3-9:armhf libnghttp3-dev:armhf libngtcp2-16:armhf libngtcp2-crypto-gnutls-dev:armhf libngtcp2-crypto-gnutls8:armhf libngtcp2-dev:armhf libp11-kit-dev:armhf libp11-kit0:armhf libpipeline1 libpkgconf3 libpsl-dev:armhf libpsl5t64:armhf libpython3-stdlib libpython3.13-minimal libpython3.13-stdlib libreadline8t64 librtmp-dev:armhf librtmp1:armhf libsasl2-2:armhf libsasl2-modules-db:armhf libssh2-1-dev:armhf libssh2-1t64:armhf libssl-dev:armhf libssl3t64:armhf libssw-dev:armhf libssw0:armhf libstdc++-14-dev:armhf libstdc++-14-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libtasn1-6:armhf libtasn1-6-dev:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libunbound8:armhf libunistring5 libunistring5:armhf libxml2 libyaml-0-2 libzstd-dev:armhf libzstd1:armhf linux-libc-dev-armhf-cross m4 man-db media-types netbase nettle-dev:armhf pkg-config:armhf pkg-kde-tools pkgconf:armhf pkgconf-bin po-debconf python3 python3-charset-normalizer python3-debian python3-minimal python3-yaml python3.13 python3.13-minimal readline-common sensible-utils zlib1g:armhf zlib1g-dev:armhf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc doc-base:armhf gcc-14-locales cpp-14-doc cpp-doc dh-make gcc-14-doc manpages-dev flex bison gdb-arm-linux-gnueabihf gcc-doc gettext-doc libasprintf-dev libgettextpo-dev gnulib-l10n groff krb5-doc:armhf samtools:armhf glibc-doc:armhf libc-l10n:armhf locales:armhf libnss-nis:armhf libnss-nisplus:armhf manpages-dev:armhf libcurl4-doc:armhf libidn-dev:armhf gmp-doc:armhf libgmp10-doc:armhf libmpfr-dev:armhf dns-root-data:armhf gnutls-bin:armhf gnutls-doc:armhf krb5-user:armhf liblzma-doc:armhf libnghttp2-doc:armhf p11-kit-doc:armhf libssl-doc:armhf libstdc++-14-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser cdbs libmail-box-perl python3-doc python3-tk python3-venv python-charset-normalizer-doc gpgv python3-apt zstd python3.13-venv python3.13-doc binfmt-support readline-doc Recommended packages: curl | wget | lynx bzip2-doc:armhf ca-certificates:armhf libarchive-cpio-perl krb5-locales:armhf libldap-common:armhf libgpm2 publicsuffix:armhf libsasl2-modules:armhf libtasn1-doc:armhf libltdl-dev libwww-perl libmail-sendmail-perl ca-certificates The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils comerr-dev:armhf cpp-14-arm-linux-gnueabihf cpp-arm-linux-gnueabihf crossbuild-essential-armhf d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-14-arm-linux-gnueabihf gcc-14-arm-linux-gnueabihf-base gcc-14-base:armhf gcc-14-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian krb5-multidev:armhf libarchive-zip-perl libasan8:armhf libasan8-armhf-cross libatomic1:armhf libatomic1-armhf-cross libbrotli-dev:armhf libbrotli1:armhf libbwa-dev:armhf libbz2-1.0:armhf libbz2-dev:armhf libc6:armhf libc6-armhf-cross libc6-dev:armhf libc6-dev-armhf-cross libcom-err2:armhf libcrypt-dev:armhf libcrypt1:armhf libcurl3t64-gnutls:armhf libcurl4-gnutls-dev:armhf libdb5.3t64:armhf libdebhelper-perl libdeflate-dev:armhf libdeflate0:armhf libelf1t64 libevent-2.1-7t64:armhf libexpat1 libfakeroot libffi8 libffi8:armhf libfile-stripnondeterminism-perl libfml-dev:armhf libfml0:armhf libgcc-14-dev:armhf libgcc-14-dev-armhf-cross libgcc-s1:armhf libgcc-s1-armhf-cross libgmp-dev:armhf libgmp10:armhf libgmpxx4ldbl:armhf libgnutls-dane0t64:armhf libgnutls-openssl27t64:armhf libgnutls28-dev:armhf libgnutls30t64:armhf libgomp1:armhf libgomp1-armhf-cross libgssapi-krb5-2:armhf libgssrpc4t64:armhf libhogweed6t64:armhf libhts-dev:armhf libhts3t64:armhf libhtscodecs2:armhf libidn2-0:armhf libidn2-dev:armhf libjsoncpp-dev:armhf libjsoncpp26:armhf libk5crypto3:armhf libkadm5clnt-mit12:armhf libkadm5srv-mit12:armhf libkdb5-10t64:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5-dev:armhf libkrb5support0:armhf libldap-dev:armhf libldap2:armhf liblzma-dev:armhf liblzma5:armhf libmagic-mgc libmagic1t64 libncursesw6 libnettle8t64:armhf libnghttp2-14:armhf libnghttp2-dev:armhf libnghttp3-9:armhf libnghttp3-dev:armhf libngtcp2-16:armhf libngtcp2-crypto-gnutls-dev:armhf libngtcp2-crypto-gnutls8:armhf libngtcp2-dev:armhf libp11-kit-dev:armhf libp11-kit0:armhf libpipeline1 libpkgconf3 libpsl-dev:armhf libpsl5t64:armhf libpython3-stdlib libpython3.13-minimal libpython3.13-stdlib libreadline8t64 librtmp-dev:armhf librtmp1:armhf libsasl2-2:armhf libsasl2-modules-db:armhf libssh2-1-dev:armhf libssh2-1t64:armhf libssl-dev:armhf libssl3t64:armhf libssw-dev:armhf libssw0:armhf libstdc++-14-dev:armhf libstdc++-14-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libtasn1-6:armhf libtasn1-6-dev:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libunbound8:armhf libunistring5 libunistring5:armhf libxml2 libyaml-0-2 libzstd-dev:armhf libzstd1:armhf linux-libc-dev-armhf-cross m4 man-db media-types netbase nettle-dev:armhf pkg-config:armhf pkg-kde-tools pkgconf:armhf pkgconf-bin po-debconf python3 python3-charset-normalizer python3-debian python3-minimal python3-yaml python3.13 python3.13-minimal readline-common sbuild-build-depends-main-dummy:armhf sensible-utils zlib1g:armhf zlib1g-dev:armhf 0 upgraded, 168 newly installed, 0 to remove and 0 not upgraded. Need to get 108 MB of archives. After this operation, 400 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1008 B] Get:2 http://localhost:3142/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.5-2 [862 kB] Get:3 http://localhost:3142/debian unstable/main amd64 libexpat1 amd64 2.7.1-1 [108 kB] Get:4 http://localhost:3142/debian unstable/main amd64 python3.13-minimal amd64 3.13.5-2 [2224 kB] Get:5 http://localhost:3142/debian unstable/main amd64 python3-minimal amd64 3.13.5-1 [27.2 kB] Get:6 http://localhost:3142/debian unstable/main amd64 media-types all 13.0.0 [29.3 kB] Get:7 http://localhost:3142/debian unstable/main amd64 netbase all 6.5 [12.4 kB] Get:8 http://localhost:3142/debian unstable/main amd64 libffi8 amd64 3.4.8-2 [24.1 kB] Get:9 http://localhost:3142/debian unstable/main amd64 libncursesw6 amd64 6.5+20250216-2 [135 kB] Get:10 http://localhost:3142/debian unstable/main amd64 readline-common all 8.2-6 [69.4 kB] Get:11 http://localhost:3142/debian unstable/main amd64 libreadline8t64 amd64 8.2-6 [169 kB] Get:12 http://localhost:3142/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.5-2 [1956 kB] Get:13 http://localhost:3142/debian unstable/main amd64 python3.13 amd64 3.13.5-2 [757 kB] Get:14 http://localhost:3142/debian unstable/main amd64 libpython3-stdlib amd64 3.13.5-1 [10.2 kB] Get:15 http://localhost:3142/debian unstable/main amd64 python3 amd64 3.13.5-1 [28.2 kB] Get:16 http://localhost:3142/debian unstable/main amd64 sensible-utils all 0.0.25 [25.0 kB] Get:17 http://localhost:3142/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get:18 http://localhost:3142/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get:19 http://localhost:3142/debian unstable/main amd64 file amd64 1:5.46-5 [43.6 kB] Get:20 http://localhost:3142/debian unstable/main amd64 gettext-base amd64 0.23.1-2 [243 kB] Get:21 http://localhost:3142/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get:22 http://localhost:3142/debian unstable/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get:23 http://localhost:3142/debian unstable/main amd64 bsdextrautils amd64 2.41-5 [94.6 kB] Get:24 http://localhost:3142/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:25 http://localhost:3142/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get:26 http://localhost:3142/debian unstable/main amd64 m4 amd64 1.4.19-8 [294 kB] Get:27 http://localhost:3142/debian unstable/main amd64 autoconf all 2.72-3.1 [494 kB] Get:28 http://localhost:3142/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get:29 http://localhost:3142/debian unstable/main amd64 automake all 1:1.17-4 [862 kB] Get:30 http://localhost:3142/debian unstable/main amd64 autopoint all 0.23.1-2 [770 kB] Get:31 http://localhost:3142/debian unstable/main amd64 binutils-arm-linux-gnueabihf amd64 2.44-3 [1501 kB] Get:32 http://localhost:3142/debian unstable/main armhf gcc-14-base armhf 14.2.0-19 [49.4 kB] Get:33 http://localhost:3142/debian unstable/main armhf libgcc-s1 armhf 14.2.0-19 [37.0 kB] Get:34 http://localhost:3142/debian unstable/main armhf libc6 armhf 2.41-9 [2255 kB] Get:35 http://localhost:3142/debian unstable/main armhf libcrypt1 armhf 1:4.4.38-1 [95.6 kB] Get:36 http://localhost:3142/debian unstable/main armhf libcrypt-dev armhf 1:4.4.38-1 [125 kB] Get:37 http://localhost:3142/debian unstable/main armhf libc6-dev armhf 2.41-9 [1327 kB] Get:38 http://localhost:3142/debian unstable/main armhf libcom-err2 armhf 1.47.2-3+b1 [24.3 kB] Get:39 http://localhost:3142/debian unstable/main armhf comerr-dev armhf 2.1-1.47.2-3+b1 [56.2 kB] Get:40 http://localhost:3142/debian unstable/main amd64 gcc-14-arm-linux-gnueabihf-base amd64 14.2.0-19cross1 [49.6 kB] Get:41 http://localhost:3142/debian unstable/main amd64 cpp-14-arm-linux-gnueabihf amd64 14.2.0-19cross1 [10.4 MB] Get:42 http://localhost:3142/debian unstable/main amd64 cpp-arm-linux-gnueabihf amd64 4:14.2.0-1 [4856 B] Get:43 http://localhost:3142/debian unstable/main amd64 gcc-14-cross-base all 14.2.0-19cross1 [44.9 kB] Get:44 http://localhost:3142/debian unstable/main amd64 libc6-armhf-cross all 2.41-8cross1 [921 kB] Get:45 http://localhost:3142/debian unstable/main amd64 libgcc-s1-armhf-cross all 14.2.0-19cross1 [36.9 kB] Get:46 http://localhost:3142/debian unstable/main amd64 libgomp1-armhf-cross all 14.2.0-19cross1 [109 kB] Get:47 http://localhost:3142/debian unstable/main amd64 libatomic1-armhf-cross all 14.2.0-19cross1 [6936 B] Get:48 http://localhost:3142/debian unstable/main amd64 libasan8-armhf-cross all 14.2.0-19cross1 [2571 kB] Get:49 http://localhost:3142/debian unstable/main amd64 libstdc++6-armhf-cross all 14.2.0-19cross1 [559 kB] Get:50 http://localhost:3142/debian unstable/main amd64 libubsan1-armhf-cross all 14.2.0-19cross1 [1038 kB] Get:51 http://localhost:3142/debian unstable/main amd64 libgcc-14-dev-armhf-cross all 14.2.0-19cross1 [768 kB] Get:52 http://localhost:3142/debian unstable/main amd64 gcc-14-arm-linux-gnueabihf amd64 14.2.0-19cross1 [19.8 MB] Get:53 http://localhost:3142/debian unstable/main amd64 gcc-arm-linux-gnueabihf amd64 4:14.2.0-1 [1452 B] Get:54 http://localhost:3142/debian unstable/main amd64 linux-libc-dev-armhf-cross all 6.12.29-1cross1 [2382 kB] Get:55 http://localhost:3142/debian unstable/main amd64 libc6-dev-armhf-cross all 2.41-8cross1 [1324 kB] Get:56 http://localhost:3142/debian unstable/main amd64 libstdc++-14-dev-armhf-cross all 14.2.0-19cross1 [2347 kB] Get:57 http://localhost:3142/debian unstable/main amd64 g++-14-arm-linux-gnueabihf amd64 14.2.0-19cross1 [11.4 MB] Get:58 http://localhost:3142/debian unstable/main amd64 g++-arm-linux-gnueabihf amd64 4:14.2.0-1 [1208 B] Get:59 http://localhost:3142/debian unstable/main amd64 crossbuild-essential-armhf all 12.12 [3548 B] Get:60 http://localhost:3142/debian unstable/main amd64 d-shlibs all 0.109 [11.1 kB] Get:61 http://localhost:3142/debian unstable/main amd64 libdebhelper-perl all 13.24.2 [90.9 kB] Get:62 http://localhost:3142/debian unstable/main amd64 libtool all 2.5.4-4 [539 kB] Get:63 http://localhost:3142/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:64 http://localhost:3142/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:65 http://localhost:3142/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get:66 http://localhost:3142/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get:67 http://localhost:3142/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get:68 http://localhost:3142/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:69 http://localhost:3142/debian unstable/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get:70 http://localhost:3142/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-1 [698 kB] Get:71 http://localhost:3142/debian unstable/main amd64 gettext amd64 0.23.1-2 [1680 kB] Get:72 http://localhost:3142/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:73 http://localhost:3142/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:74 http://localhost:3142/debian unstable/main amd64 debhelper all 13.24.2 [919 kB] Get:75 http://localhost:3142/debian unstable/main amd64 libfakeroot amd64 1.37.1.2-1 [29.7 kB] Get:76 http://localhost:3142/debian unstable/main amd64 fakeroot amd64 1.37.1.2-1 [76.0 kB] Get:77 http://localhost:3142/debian unstable/main armhf libkrb5support0 armhf 1.21.3-5 [30.4 kB] Get:78 http://localhost:3142/debian unstable/main armhf libk5crypto3 armhf 1.21.3-5 [76.0 kB] Get:79 http://localhost:3142/debian unstable/main armhf libkeyutils1 armhf 1.6.3-6 [8568 B] Get:80 http://localhost:3142/debian unstable/main armhf libzstd1 armhf 1.5.7+dfsg-1 [264 kB] Get:81 http://localhost:3142/debian unstable/main armhf zlib1g armhf 1:1.3.dfsg+really1.3.1-1+b1 [75.2 kB] Get:82 http://localhost:3142/debian unstable/main armhf libssl3t64 armhf 3.5.0-2 [1980 kB] Get:83 http://localhost:3142/debian unstable/main armhf libkrb5-3 armhf 1.21.3-5 [284 kB] Get:84 http://localhost:3142/debian unstable/main armhf libgssapi-krb5-2 armhf 1.21.3-5 [116 kB] Get:85 http://localhost:3142/debian unstable/main armhf libgssrpc4t64 armhf 1.21.3-5 [52.9 kB] Get:86 http://localhost:3142/debian unstable/main armhf libkadm5clnt-mit12 armhf 1.21.3-5 [37.7 kB] Get:87 http://localhost:3142/debian unstable/main armhf libkdb5-10t64 armhf 1.21.3-5 [37.6 kB] Get:88 http://localhost:3142/debian unstable/main armhf libkadm5srv-mit12 armhf 1.21.3-5 [47.6 kB] Get:89 http://localhost:3142/debian unstable/main armhf krb5-multidev armhf 1.21.3-5 [126 kB] Get:90 http://localhost:3142/debian unstable/main armhf libasan8 armhf 14.2.0-19 [2583 kB] Get:91 http://localhost:3142/debian unstable/main armhf libatomic1 armhf 14.2.0-19 [7200 B] Get:92 http://localhost:3142/debian unstable/main armhf libbrotli1 armhf 1.1.0-2+b7 [284 kB] Get:93 http://localhost:3142/debian unstable/main armhf libbrotli-dev armhf 1.1.0-2+b7 [294 kB] Get:94 http://localhost:3142/debian unstable/main armhf libbwa-dev armhf 0.7.18-1 [151 kB] Get:95 http://localhost:3142/debian unstable/main armhf libbz2-1.0 armhf 1.0.8-6 [35.0 kB] Get:96 http://localhost:3142/debian unstable/main armhf libbz2-dev armhf 1.0.8-6 [28.7 kB] Get:97 http://localhost:3142/debian unstable/main armhf libgmp10 armhf 2:6.3.0+dfsg-3 [512 kB] Get:98 http://localhost:3142/debian unstable/main armhf libnettle8t64 armhf 3.10.1-1 [312 kB] Get:99 http://localhost:3142/debian unstable/main armhf libhogweed6t64 armhf 3.10.1-1 [322 kB] Get:100 http://localhost:3142/debian unstable/main armhf libunistring5 armhf 1.3-2 [441 kB] Get:101 http://localhost:3142/debian unstable/main armhf libidn2-0 armhf 2.3.8-2 [105 kB] Get:102 http://localhost:3142/debian unstable/main armhf libffi8 armhf 3.4.8-2 [20.4 kB] Get:103 http://localhost:3142/debian unstable/main armhf libp11-kit0 armhf 0.25.5-3 [385 kB] Get:104 http://localhost:3142/debian unstable/main armhf libtasn1-6 armhf 4.20.0-2 [44.4 kB] Get:105 http://localhost:3142/debian unstable/main armhf libgnutls30t64 armhf 3.8.9-3 [1383 kB] Get:106 http://localhost:3142/debian unstable/main armhf libdb5.3t64 armhf 5.3.28+dfsg2-9 [602 kB] Get:107 http://localhost:3142/debian unstable/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-9 [18.5 kB] Get:108 http://localhost:3142/debian unstable/main armhf libsasl2-2 armhf 2.1.28+dfsg1-9 [50.4 kB] Get:109 http://localhost:3142/debian unstable/main armhf libldap2 armhf 2.6.10+dfsg-1 [168 kB] Get:110 http://localhost:3142/debian unstable/main armhf libnghttp2-14 armhf 1.64.0-1.1 [63.0 kB] Get:111 http://localhost:3142/debian unstable/main armhf libnghttp3-9 armhf 1.8.0-1 [59.9 kB] Get:112 http://localhost:3142/debian unstable/main armhf libngtcp2-16 armhf 1.11.0-1 [127 kB] Get:113 http://localhost:3142/debian unstable/main armhf libngtcp2-crypto-gnutls8 armhf 1.11.0-1 [26.7 kB] Get:114 http://localhost:3142/debian unstable/main armhf libpsl5t64 armhf 0.21.2-1.1+b1 [55.8 kB] Get:115 http://localhost:3142/debian unstable/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b5 [53.2 kB] Get:116 http://localhost:3142/debian unstable/main armhf libssh2-1t64 armhf 1.11.1-1 [227 kB] Get:117 http://localhost:3142/debian unstable/main armhf libcurl3t64-gnutls armhf 8.14.1-2 [332 kB] Get:118 http://localhost:3142/debian unstable/main armhf libevent-2.1-7t64 armhf 2.1.12-stable-10+b1 [164 kB] Get:119 http://localhost:3142/debian unstable/main armhf libunbound8 armhf 1.22.0-1+b1 [539 kB] Get:120 http://localhost:3142/debian unstable/main armhf libgnutls-dane0t64 armhf 3.8.9-3 [446 kB] Get:121 http://localhost:3142/debian unstable/main armhf libgnutls-openssl27t64 armhf 3.8.9-3 [446 kB] Get:122 http://localhost:3142/debian unstable/main armhf libidn2-dev armhf 2.3.8-2 [97.6 kB] Get:123 http://localhost:3142/debian unstable/main armhf libp11-kit-dev armhf 0.25.5-3 [208 kB] Get:124 http://localhost:3142/debian unstable/main armhf libtasn1-6-dev armhf 4.20.0-2 [93.4 kB] Get:125 http://localhost:3142/debian unstable/main armhf libstdc++6 armhf 14.2.0-19 [607 kB] Get:126 http://localhost:3142/debian unstable/main armhf libgmpxx4ldbl armhf 2:6.3.0+dfsg-3 [328 kB] Get:127 http://localhost:3142/debian unstable/main armhf libgmp-dev armhf 2:6.3.0+dfsg-3 [592 kB] Get:128 http://localhost:3142/debian unstable/main armhf nettle-dev armhf 3.10.1-1 [1314 kB] Get:129 http://localhost:3142/debian unstable/main armhf libgnutls28-dev armhf 3.8.9-3 [1338 kB] Get:130 http://localhost:3142/debian unstable/main armhf libkrb5-dev armhf 1.21.3-5 [16.1 kB] Get:131 http://localhost:3142/debian unstable/main armhf libldap-dev armhf 2.6.10+dfsg-1 [286 kB] Get:132 http://localhost:3142/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] Get:133 http://localhost:3142/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Get:134 http://localhost:3142/debian unstable/main armhf pkgconf armhf 1.8.1-4 [26.1 kB] Get:135 http://localhost:3142/debian unstable/main armhf libnghttp2-dev armhf 1.64.0-1.1 [103 kB] Get:136 http://localhost:3142/debian unstable/main armhf libnghttp3-dev armhf 1.8.0-1 [84.8 kB] Get:137 http://localhost:3142/debian unstable/main armhf libngtcp2-crypto-gnutls-dev armhf 1.11.0-1 [32.2 kB] Get:138 http://localhost:3142/debian unstable/main armhf libngtcp2-dev armhf 1.11.0-1 [178 kB] Get:139 http://localhost:3142/debian unstable/main armhf libpsl-dev armhf 0.21.2-1.1+b1 [76.8 kB] Get:140 http://localhost:3142/debian unstable/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1+b1 [905 kB] Get:141 http://localhost:3142/debian unstable/main armhf librtmp-dev armhf 2.4+20151223.gitfa8646d.1-2+b5 [63.6 kB] Get:142 http://localhost:3142/debian unstable/main armhf libssl-dev armhf 3.5.0-2 [2562 kB] Get:143 http://localhost:3142/debian unstable/main armhf libssh2-1-dev armhf 1.11.1-1 [378 kB] Get:144 http://localhost:3142/debian unstable/main armhf libzstd-dev armhf 1.5.7+dfsg-1 [333 kB] Get:145 http://localhost:3142/debian unstable/main armhf libcurl4-gnutls-dev armhf 8.14.1-2 [463 kB] Get:146 http://localhost:3142/debian unstable/main armhf libdeflate0 armhf 1.23-2 [36.5 kB] Get:147 http://localhost:3142/debian unstable/main armhf libdeflate-dev armhf 1.23-2 [44.6 kB] Get:148 http://localhost:3142/debian unstable/main armhf libfml0 armhf 0.1+git20221215.85f159e-1 [70.5 kB] Get:149 http://localhost:3142/debian unstable/main armhf libfml-dev armhf 0.1+git20221215.85f159e-1 [82.1 kB] Get:150 http://localhost:3142/debian unstable/main armhf libgomp1 armhf 14.2.0-19 [111 kB] Get:151 http://localhost:3142/debian unstable/main armhf libubsan1 armhf 14.2.0-19 [1040 kB] Get:152 http://localhost:3142/debian unstable/main armhf libgcc-14-dev armhf 14.2.0-19 [768 kB] Get:153 http://localhost:3142/debian unstable/main armhf libhtscodecs2 armhf 1.6.1-2 [63.2 kB] Get:154 http://localhost:3142/debian unstable/main armhf liblzma5 armhf 5.8.1-1 [296 kB] Get:155 http://localhost:3142/debian unstable/main armhf libhts3t64 armhf 1.21+ds-1 [408 kB] Get:156 http://localhost:3142/debian unstable/main armhf liblzma-dev armhf 5.8.1-1 [336 kB] Get:157 http://localhost:3142/debian unstable/main armhf libhts-dev armhf 1.21+ds-1 [1657 kB] Get:158 http://localhost:3142/debian unstable/main armhf libjsoncpp26 armhf 1.9.6-3 [69.9 kB] Get:159 http://localhost:3142/debian unstable/main armhf libjsoncpp-dev armhf 1.9.6-3 [25.0 kB] Get:160 http://localhost:3142/debian unstable/main armhf libssw0 armhf 1.1-15+b2 [21.7 kB] Get:161 http://localhost:3142/debian unstable/main armhf libssw-dev armhf 1.1-15+b2 [24.7 kB] Get:162 http://localhost:3142/debian unstable/main armhf libstdc++-14-dev armhf 14.2.0-19 [2380 kB] Get:163 http://localhost:3142/debian unstable/main amd64 libyaml-0-2 amd64 0.2.5-2 [52.5 kB] Get:164 http://localhost:3142/debian unstable/main armhf pkg-config armhf 1.8.1-4 [14.0 kB] Get:165 http://localhost:3142/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.2-1 [128 kB] Get:166 http://localhost:3142/debian unstable/main amd64 python3-debian all 1.0.1 [120 kB] Get:167 http://localhost:3142/debian unstable/main amd64 python3-yaml amd64 6.0.2-1+b2 [136 kB] Get:168 http://localhost:3142/debian unstable/main amd64 pkg-kde-tools all 0.18.12 [89.1 kB] Preconfiguring packages ... Fetched 108 MB in 3s (42.8 MB/s) Selecting previously unselected package libpython3.13-minimal:amd64. (Reading database ... 12887 files and directories currently installed.) Preparing to unpack .../libpython3.13-minimal_3.13.5-2_amd64.deb ... Unpacking libpython3.13-minimal:amd64 (3.13.5-2) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.7.1-1_amd64.deb ... Unpacking libexpat1:amd64 (2.7.1-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.5-2_amd64.deb ... Unpacking python3.13-minimal (3.13.5-2) ... Setting up libpython3.13-minimal:amd64 (3.13.5-2) ... Setting up libexpat1:amd64 (2.7.1-1) ... Setting up python3.13-minimal (3.13.5-2) ... Selecting previously unselected package python3-minimal. (Reading database ... 13221 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.5-1_amd64.deb ... Unpacking python3-minimal (3.13.5-1) ... 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-6) ... Selecting previously unselected package libpython3.13-stdlib:amd64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.5-2_amd64.deb ... Unpacking libpython3.13-stdlib:amd64 (3.13.5-2) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.5-2_amd64.deb ... Unpacking python3.13 (3.13.5-2) ... Selecting previously unselected package libpython3-stdlib:amd64. 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Setting up libyaml-0-2:amd64 (0.2.5-2) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gcc-14-arm-linux-gnueabihf-base:amd64 (14.2.0-19cross1) ... Setting up gettext-base (0.23.1-2) ... Setting up m4 (1.4.19-8) ... Setting up gcc-14-cross-base (14.2.0-19cross1) ... Setting up file (1:5.46-5) ... Setting up libatomic1-armhf-cross (14.2.0-19cross1) ... Setting up libfakeroot:amd64 (1.37.1.2-1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up fakeroot (1.37.1.2-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up autotools-dev (20240727.1) ... Setting up libpkgconf3:amd64 (1.8.1-4) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up linux-libc-dev-armhf-cross (6.12.29-1cross1) ... Setting up autopoint (0.23.1-2) ... Setting up d-shlibs (0.109) ... Setting up pkgconf-bin (1.8.1-4) ... Setting up libncursesw6:amd64 (6.5+20250216-2) ... Setting up autoconf (2.72-3.1) ... Setting up libbwa-dev:armhf (0.7.18-1) ... Setting up libffi8:amd64 (3.4.8-2) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.25) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up netbase (6.5) ... Setting up binutils-arm-linux-gnueabihf (2.44-3) ... Setting up readline-common (8.2-6) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-1) ... Setting up cpp-14-arm-linux-gnueabihf (14.2.0-19cross1) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libgomp1-armhf-cross (14.2.0-19cross1) ... Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-2) ... Setting up libtool (2.5.4-4) ... Setting up libgcc-s1-armhf-cross (14.2.0-19cross1) ... Setting up libc6-dev-armhf-cross (2.41-8cross1) ... Setting up pkgconf:armhf (1.8.1-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libstdc++6-armhf-cross (14.2.0-19cross1) ... Setting up pkg-config:armhf (1.8.1-4) ... Setting up libubsan1-armhf-cross (14.2.0-19cross1) ... Setting up libreadline8t64:amd64 (8.2-6) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-9) ... Setting up libpython3.13-stdlib:amd64 (3.13.5-2) ... Setting up cpp-arm-linux-gnueabihf (4:14.2.0-1) ... Setting up libpython3-stdlib:amd64 (3.13.5-1) ... Setting up libasan8-armhf-cross (14.2.0-19cross1) ... Setting up python3.13 (3.13.5-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up python3 (3.13.5-1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libgcc-14-dev-armhf-cross (14.2.0-19cross1) ... Setting up libstdc++-14-dev-armhf-cross (14.2.0-19cross1) ... Setting up python3-charset-normalizer (3.4.2-1) ... Setting up gcc-14-arm-linux-gnueabihf (14.2.0-19cross1) ... 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Setting up libkeyutils1:armhf (1.6.3-6) ... Setting up libzstd-dev:armhf (1.5.7+dfsg-1) ... Setting up liblzma5:armhf (5.8.1-1) ... Setting up libbrotli1:armhf (1.1.0-2+b7) ... Setting up libnghttp2-14:armhf (1.64.0-1.1) ... Setting up libdeflate0:armhf (1.23-2) ... Setting up libevent-2.1-7t64:armhf (2.1.12-stable-10+b1) ... Setting up zlib1g:armhf (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libcrypt1:armhf (1:4.4.38-1) ... Setting up libcom-err2:armhf (1.47.2-3+b1) ... Setting up libngtcp2-dev:armhf (1.11.0-1) ... Setting up libgomp1:armhf (14.2.0-19) ... Setting up libfml0:armhf (0.1+git20221215.85f159e-1) ... Setting up libkrb5support0:armhf (1.21.3-5) ... Setting up libsasl2-modules-db:armhf (2.1.28+dfsg1-9) ... Setting up libnettle8t64:armhf (3.10.1-1) ... Setting up libjsoncpp26:armhf (1.9.6-3) ... Setting up libgmp10:armhf (2:6.3.0+dfsg-3) ... Setting up libp11-kit0:armhf (0.25.5-3) ... Setting up libunistring5:armhf (1.3-2) ... Setting up libatomic1:armhf (14.2.0-19) ... 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Processing triggers for libc-bin (2.41-9) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-32-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.129-1 (2025-03-06) amd64 (x86_64) Toolchain package versions: binutils_2.44-3 dpkg-dev_1.22.21 g++-14_14.2.0-19 gcc-14_14.2.0-19 libc6-dev_2.41-9 libstdc++-14-dev_14.2.0-19 libstdc++-14-dev-armhf-cross_14.2.0-19cross1 libstdc++6_14.2.0-19 libstdc++6-armhf-cross_14.2.0-19cross1 linux-libc-dev_6.12.35-1 Package versions: apt_3.0.3 apt-utils_3.0.3 autoconf_2.72-3.1 automake_1:1.17-4 autopoint_0.23.1-2 autotools-dev_20240727.1 base-files_13.8 base-passwd_3.6.7 bash_5.2.37-2+b3 binutils_2.44-3 binutils-arm-linux-gnueabihf_2.44-3 binutils-common_2.44-3 binutils-x86-64-linux-gnu_2.44-3 bsdextrautils_2.41-5 bsdutils_1:2.41-5 build-essential_12.12 bzip2_1.0.8-6 comerr-dev_2.1-1.47.2-3+b1 coreutils_9.7-3 cpp_4:14.2.0-1 cpp-14_14.2.0-19 cpp-14-arm-linux-gnueabihf_14.2.0-19cross1 cpp-14-x86-64-linux-gnu_14.2.0-19 cpp-arm-linux-gnueabihf_4:14.2.0-1 cpp-x86-64-linux-gnu_4:14.2.0-1 crossbuild-essential-armhf_12.12 d-shlibs_0.109 dash_0.5.12-12 debconf_1.5.91 debhelper_13.24.2 debian-archive-keyring_2025.1 debianutils_5.23.1 dh-autoreconf_20 dh-strip-nondeterminism_1.14.1-2 diffutils_1:3.10-4 dpkg_1.22.21 dpkg-dev_1.22.21 dwz_0.15-1+b1 fakeroot_1.37.1.2-1 file_1:5.46-5 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.2.0-19 g++-14-arm-linux-gnueabihf_14.2.0-19cross1 g++-14-x86-64-linux-gnu_14.2.0-19 g++-arm-linux-gnueabihf_4:14.2.0-1 g++-x86-64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-19 gcc-14-arm-linux-gnueabihf_14.2.0-19cross1 gcc-14-arm-linux-gnueabihf-base_14.2.0-19cross1 gcc-14-base_14.2.0-19 gcc-14-cross-base_14.2.0-19cross1 gcc-14-x86-64-linux-gnu_14.2.0-19 gcc-arm-linux-gnueabihf_4:14.2.0-1 gcc-x86-64-linux-gnu_4:14.2.0-1 gettext_0.23.1-2 gettext-base_0.23.1-2 grep_3.11-4 groff-base_1.23.0-9 gzip_1.13-1 hostname_3.25 init-system-helpers_1.68 intltool-debian_0.35.0+20060710.6 krb5-multidev_1.21.3-5 libacl1_2.3.2-2+b1 libapt-pkg7.0_3.0.3 libarchive-zip-perl_1.68-1 libasan8_14.2.0-19 libasan8-armhf-cross_14.2.0-19cross1 libatomic1_14.2.0-19 libatomic1-armhf-cross_14.2.0-19cross1 libattr1_1:2.5.2-3 libaudit-common_1:4.0.5-1 libaudit1_1:4.0.5-1 libbinutils_2.44-3 libblkid1_2.41-5 libbrotli-dev_1.1.0-2+b7 libbrotli1_1.1.0-2+b7 libbsd0_0.12.2-2 libbwa-dev_0.7.18-1 libbz2-1.0_1.0.8-6 libbz2-dev_1.0.8-6 libc-bin_2.41-9 libc-dev-bin_2.41-9 libc6_2.41-9 libc6-armhf-cross_2.41-8cross1 libc6-dev_2.41-9 libc6-dev-armhf-cross_2.41-8cross1 libcap-ng0_0.8.5-4+b1 libcap2_1:2.75-9 libcc1-0_14.2.0-19 libcom-err2_1.47.2-3+b1 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.44-3 libctf0_2.44-3 libcurl3t64-gnutls_8.14.1-2 libcurl4-gnutls-dev_8.14.1-2 libdb5.3t64_5.3.28+dfsg2-9 libdebconfclient0_0.279 libdebhelper-perl_13.24.2 libdeflate-dev_1.23-2 libdeflate0_1.23-2 libdpkg-perl_1.22.21 libelf1t64_0.192-4 libevent-2.1-7t64_2.1.12-stable-10+b1 libexpat1_2.7.1-1 libfakeroot_1.37.1.2-1 libffi8_3.4.8-2 libfile-stripnondeterminism-perl_1.14.1-2 libfml-dev_0.1+git20221215.85f159e-1 libfml0_0.1+git20221215.85f159e-1 libgcc-14-dev_14.2.0-19 libgcc-14-dev-armhf-cross_14.2.0-19cross1 libgcc-s1_14.2.0-19 libgcc-s1-armhf-cross_14.2.0-19cross1 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgmp-dev_2:6.3.0+dfsg-3 libgmp10_2:6.3.0+dfsg-3 libgmpxx4ldbl_2:6.3.0+dfsg-3 libgnutls-dane0t64_3.8.9-3 libgnutls-openssl27t64_3.8.9-3 libgnutls28-dev_3.8.9-3 libgnutls30t64_3.8.9-3 libgomp1_14.2.0-19 libgomp1-armhf-cross_14.2.0-19cross1 libgprofng0_2.44-3 libgssapi-krb5-2_1.21.3-5 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python3-yaml_6.0.2-1+b2 python3.13_3.13.5-2 python3.13-minimal_3.13.5-2 readline-common_8.2-6 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.25 sqv_1.3.0-3 sysvinit-utils_3.14-4 tar_1.35+dfsg-3.1 tzdata_2025b-4 util-linux_2.41-5 xz-utils_5.8.1-1 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libseqlib Binary: libseqlib2, libseqlib-dev Architecture: any Version: 1.2.0+dfsg-11 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Étienne Mollier Homepage: https://github.com/walaj/SeqLib Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/libseqlib Vcs-Git: https://salsa.debian.org/med-team/libseqlib.git Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, pkg-kde-tools, libhts-dev, libcurl4-gnutls-dev | libcurl4-dev, zlib1g-dev, libfml-dev (>= 0.1+git20190320.b499514), libbwa-dev, libjsoncpp-dev, libssw-dev, libbz2-dev Package-List: libseqlib-dev deb libdevel optional arch=any libseqlib2 deb libs optional arch=any Checksums-Sha1: 584cb70cc2d11d595f26ec50763d11ca570395c5 148996 libseqlib_1.2.0+dfsg.orig.tar.xz 89ee20e44e0e76c6efce309a56e33556a76149bd 15456 libseqlib_1.2.0+dfsg-11.debian.tar.xz Checksums-Sha256: 408ee92e5041ff45d9d259d1507ef783e74c565d02e0c623ef0a67a7c387b953 148996 libseqlib_1.2.0+dfsg.orig.tar.xz 9e85fd66de1a1e1fcb576e045cfd1fefbeed75b222450032dfdc0b39a39ba2ea 15456 libseqlib_1.2.0+dfsg-11.debian.tar.xz Files: 8d8f26bf4fd751789bbc53bd7319355a 148996 libseqlib_1.2.0+dfsg.orig.tar.xz 6f36289dd0bbde1824dc445037845166 15456 libseqlib_1.2.0+dfsg-11.debian.tar.xz Dgit: 279a189ccc52e73b124a50bcfe14717ee68c64d8 debian archive/debian/1.2.0+dfsg-11 https://git.dgit.debian.org/libseqlib -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmV7fQAUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdowIxAAxOwXiOsLHzl8ozOX9E3nR4m7iV6w /+2iDm3S90Xj/MRyr6A6BoJ7ikHHkIgICBHYAdsQJ1pAjkuMLd5QnKhGPyOieZjA JqwybgsoFhg5onEV1YXIFePTvyB5LbSEAFWa4J97do06AJjdnwpCEiszxvcdMQrC 3b4URe/BBdsB/eMcY/7R5Vs5L9xH1ol/vF9e0sxj8pOxX91rOkdXd0B4KQ70QJuq x4yCjF3O8cNl3ntE6+hizMBcVLqwMgo5BlmdfmS+sBGuLOBVxVkz0AZzhjfa1Uol jgesCiUP1UR8JeCmd+p4Y+Vxr2zRJlz6MAiJOxT8UfPh98PVyGnmeCTd8OL39OA5 AcT/JTlMDxXA1rv0sAMQkcJBlMPNHr+8zZWPbH2/GndaQgwnY8iQhILPbW4H5+YQ dOlKVNHZNOcWpZZwedR7yPybOfXIKl7CKQdlQFc6Kp6gsnRmXE6V9OR0JvhkuJRa 03o7/25eByPNYpHar7x1H3PXd/ksUOp78xP8RZad7MisAVzS+wz2dsQDSmwvgayK MxSCn18sCu/3USnrsRvMHg2BQHD2oIDx4ApxliCmIWdEsfq8ixEjFawTj/U2evV5 34zqyBvZPS9gaVq4N5Zush80tKxOq8NaY4SYejlvPSCUTSqVoPgOoIV+aml+zXAD cmcRNsM7KLyr36M= =JgTs -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./libseqlib_1.2.0+dfsg-11.dsc: no acceptable signature found dpkg-source: info: extracting libseqlib in /<> dpkg-source: info: unpacking libseqlib_1.2.0+dfsg.orig.tar.xz dpkg-source: info: unpacking libseqlib_1.2.0+dfsg-11.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_libs.patch dpkg-source: info: applying adapt_to_debian_fermi-lite.patch dpkg-source: info: applying fix_fermi-lite_usage.patch dpkg-source: info: applying fix_htslib_usage.patch dpkg-source: info: applying fml_include_path.patch dpkg-source: info: applying dynamic_lib.patch dpkg-source: info: applying use_debian_packaged_jsoncpp.patch dpkg-source: info: applying use_debian_packaged_ssw.patch dpkg-source: info: applying pkg-config.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.5VPy5oPq4M/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-822718ef-ce39-4c01-a82e-794f22158eba SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa XDG_SESSION_CLASS=user dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aarmhf -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package libseqlib dpkg-buildpackage: info: source version 1.2.0+dfsg-11 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --with pkgkde_symbolshelper dh_clean debian/rules binary-arch dh binary-arch --with pkgkde_symbolshelper dh_update_autotools_config -a dh_autoreconf -a libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac, libtoolize: and rerunning libtoolize and aclocal. libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am. libtoolize: 'AC_PROG_RANLIB' is rendered obsolete by 'LT_INIT' configure.ac:6: warning: The macro 'AC_CONFIG_HEADER' is obsolete. configure.ac:6: You should run autoupdate. ./lib/autoconf/status.m4:719: AC_CONFIG_HEADER is expanded from... configure.ac:6: the top level configure.ac:19: warning: The macro 'AC_PROG_LIBTOOL' is obsolete. configure.ac:19: You should run autoupdate. aclocal.m4:122: AC_PROG_LIBTOOL is expanded from... configure.ac:19: the top level configure.ac:17: installing './compile' configure.ac:19: installing './config.guess' configure.ac:19: installing './config.sub' configure.ac:4: installing './install-sh' configure.ac:4: installing './missing' src/Makefile.am: installing './depcomp' dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=arm-linux-gnueabihf checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for arm-linux-gnueabihf-strip... arm-linux-gnueabihf-strip checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for arm-linux-gnueabihf-g++... arm-linux-gnueabihf-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether arm-linux-gnueabihf-g++ accepts -g... yes checking for arm-linux-gnueabihf-g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of arm-linux-gnueabihf-g++... none checking for arm-linux-gnueabihf-gcc... arm-linux-gnueabihf-gcc checking whether the compiler supports GNU C... yes checking whether arm-linux-gnueabihf-gcc accepts -g... yes checking for arm-linux-gnueabihf-gcc option to enable C11 features... none needed checking whether arm-linux-gnueabihf-gcc understands -c and -o together... yes checking dependency style of arm-linux-gnueabihf-gcc... none checking for arm-linux-gnueabihf-ranlib... arm-linux-gnueabihf-ranlib checking build system type... x86_64-pc-linux-gnu checking host system type... arm-unknown-linux-gnueabihf checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by arm-linux-gnueabihf-gcc... /usr/arm-linux-gnueabihf/bin/ld checking if the linker (/usr/arm-linux-gnueabihf/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/arm-linux-gnueabihf-nm -B checking the name lister (/usr/bin/arm-linux-gnueabihf-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/arm-linux-gnueabihf/bin/ld option to reload object files... -r checking for file... file checking for arm-linux-gnueabihf-objdump... arm-linux-gnueabihf-objdump checking how to recognize dependent libraries... pass_all checking for arm-linux-gnueabihf-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for arm-linux-gnueabihf-ar... arm-linux-gnueabihf-ar checking for archiver @FILE support... @ checking for arm-linux-gnueabihf-strip... (cached) arm-linux-gnueabihf-strip checking command to parse /usr/bin/arm-linux-gnueabihf-nm -B output from arm-linux-gnueabihf-gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for arm-linux-gnueabihf-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if arm-linux-gnueabihf-gcc supports -fno-rtti -fno-exceptions... no checking for arm-linux-gnueabihf-gcc option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabihf-gcc PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabihf-gcc static flag -static works... yes checking if arm-linux-gnueabihf-gcc supports -c -o file.o... yes checking if arm-linux-gnueabihf-gcc supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabihf-gcc linker (/usr/arm-linux-gnueabihf/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... arm-linux-gnueabihf-g++ -E checking for ld used by arm-linux-gnueabihf-g++... /usr/arm-linux-gnueabihf/bin/ld checking if the linker (/usr/arm-linux-gnueabihf/bin/ld) is GNU ld... yes checking whether the arm-linux-gnueabihf-g++ linker (/usr/arm-linux-gnueabihf/bin/ld) supports shared libraries... yes checking for arm-linux-gnueabihf-g++ option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabihf-g++ PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabihf-g++ static flag -static works... yes checking if arm-linux-gnueabihf-g++ supports -c -o file.o... yes checking if arm-linux-gnueabihf-g++ supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabihf-g++ linker (/usr/arm-linux-gnueabihf/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for zlib.h... yes checking for library containing gzopen... -lz checking for library containing lzma_code... -llzma checking for library containing BZ2_bzBuffToBuffDecompress... -lbz2 checking for library containing clock_gettime... none required checking for arm-linux-gnueabihf-pkg-config... /usr/bin/arm-linux-gnueabihf-pkg-config checking pkg-config is at least version 0.9.0... yes checking for htslib... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/seqtools/Makefile config.status: creating libseqlib.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in src make[3]: Entering directory '/<>/src' /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o libseqlib_la-FastqReader.lo `test -f 'FastqReader.cpp' || echo './'`FastqReader.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c FastqReader.cpp -fPIC -DPIC -o .libs/libseqlib_la-FastqReader.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c FastqReader.cpp -o libseqlib_la-FastqReader.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o libseqlib_la-BFC.lo `test -f 'BFC.cpp' || echo './'`BFC.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c BFC.cpp -fPIC -DPIC -o .libs/libseqlib_la-BFC.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c BFC.cpp -o libseqlib_la-BFC.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o libseqlib_la-ReadFilter.lo `test -f 'ReadFilter.cpp' || echo './'`ReadFilter.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c ReadFilter.cpp -fPIC -DPIC -o .libs/libseqlib_la-ReadFilter.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c ReadFilter.cpp -o libseqlib_la-ReadFilter.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o 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>/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o libseqlib_la-BamWriter.lo `test -f 'BamWriter.cpp' || echo './'`BamWriter.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c BamWriter.cpp -fPIC -DPIC 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../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o libseqlib_la-BWAWrapper.lo `test -f 'BWAWrapper.cpp' || echo './'`BWAWrapper.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c BWAWrapper.cpp -fPIC -DPIC -o .libs/libseqlib_la-BWAWrapper.o In file included from /usr/arm-linux-gnueabihf/include/c++/14/algorithm:61, from ../SeqLib/BWAWrapper.h:7, from BWAWrapper.cpp:9: /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_comp_iter]': /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_algo.h:1750:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1750 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1770 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_algo.h:61: /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = mem_aln_t; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1876 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = bool (*)(const mem_aln_t&, const mem_aln_t&)]' at /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_algo.h:4805:18, inlined from 'void SeqLib::BWAWrapper::AlignSequence(const std::string&, const std::string&, SeqLib::BamRecordVector&, bool, double, int) const' at BWAWrapper.cpp:301:14: /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1905 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1906 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1907 | __comp); | ~~~~~~~ In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_algo.h:1908:31, inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = bool (*)(const mem_aln_t&, const mem_aln_t&)]' at /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_algo.h:4805:18, inlined from 'void SeqLib::BWAWrapper::AlignSequence(const std::string&, const std::string&, SeqLib::BamRecordVector&, bool, double, int) const' at BWAWrapper.cpp:301:14: /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1822 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c BWAWrapper.cpp -o libseqlib_la-BWAWrapper.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o libseqlib_la-BamRecord.lo `test -f 'BamRecord.cpp' || echo './'`BamRecord.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c BamRecord.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamRecord.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include 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-DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c FermiAssembler.cpp -fPIC -DPIC -o .libs/libseqlib_la-FermiAssembler.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c FermiAssembler.cpp -o libseqlib_la-FermiAssembler.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o libseqlib_la-BamHeader.lo `test -f 'BamHeader.cpp' || echo './'`BamHeader.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c BamHeader.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamHeader.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c BamHeader.cpp -o libseqlib_la-BamHeader.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link arm-linux-gnueabihf-g++ -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -version-info 2:0 -lfml `/usr/bin/arm-linux-gnueabihf-pkg-config --libs htslib` `/usr/bin/arm-linux-gnueabihf-pkg-config --libs jsoncpp` -lssw -Wl,-z,relro -Wl,-z,now -o libseqlib.la -rpath /usr/lib/arm-linux-gnueabihf libseqlib_la-FastqReader.lo libseqlib_la-BFC.lo libseqlib_la-ReadFilter.lo libseqlib_la-SeqPlot.lo libseqlib_la-GenomicRegion.lo libseqlib_la-RefGenome.lo libseqlib_la-BamWriter.lo libseqlib_la-BamReader.lo libseqlib_la-BWAWrapper.lo libseqlib_la-BamRecord.lo libseqlib_la-FermiAssembler.lo libseqlib_la-BamHeader.lo -lbz2 -llzma -lz -pthread libtool: link: arm-linux-gnueabihf-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc-cross/arm-linux-gnueabihf/14/../../../../arm-linux-gnueabihf/lib/crti.o /usr/lib/gcc-cross/arm-linux-gnueabihf/14/crtbeginS.o .libs/libseqlib_la-FastqReader.o .libs/libseqlib_la-BFC.o .libs/libseqlib_la-ReadFilter.o .libs/libseqlib_la-SeqPlot.o .libs/libseqlib_la-GenomicRegion.o .libs/libseqlib_la-RefGenome.o .libs/libseqlib_la-BamWriter.o .libs/libseqlib_la-BamReader.o .libs/libseqlib_la-BWAWrapper.o .libs/libseqlib_la-BamRecord.o .libs/libseqlib_la-FermiAssembler.o .libs/libseqlib_la-BamHeader.o -lfml -lhts -ljsoncpp -lssw -lbz2 -llzma -lz -L/usr/lib/gcc-cross/arm-linux-gnueabihf/14 -L/usr/lib/gcc-cross/arm-linux-gnueabihf/14/../../../../arm-linux-gnueabihf/lib -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc-cross/arm-linux-gnueabihf/14/crtendS.o /usr/lib/gcc-cross/arm-linux-gnueabihf/14/../../../../arm-linux-gnueabihf/lib/crtn.o -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -pthread -Wl,-soname -Wl,libseqlib.so.2 -o .libs/libseqlib.so.2.0.0 libtool: link: (cd ".libs" && rm -f "libseqlib.so.2" && ln -s "libseqlib.so.2.0.0" "libseqlib.so.2") libtool: link: (cd ".libs" && rm -f "libseqlib.so" && ln -s "libseqlib.so.2.0.0" "libseqlib.so") libtool: link: arm-linux-gnueabihf-ar cr .libs/libseqlib.a libseqlib_la-FastqReader.o libseqlib_la-BFC.o libseqlib_la-ReadFilter.o libseqlib_la-SeqPlot.o libseqlib_la-GenomicRegion.o libseqlib_la-RefGenome.o libseqlib_la-BamWriter.o libseqlib_la-BamReader.o libseqlib_la-BWAWrapper.o libseqlib_la-BamRecord.o libseqlib_la-FermiAssembler.o libseqlib_la-BamHeader.o libtool: link: arm-linux-gnueabihf-ranlib .libs/libseqlib.a libtool: link: ( cd ".libs" && rm -f "libseqlib.la" && ln -s "../libseqlib.la" "libseqlib.la" ) make[3]: Leaving directory '/<>/src' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/libseqlib-1.2.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' echo "mkdir -p lib && cp src/libseqlib.a fermi-lite/libfml.a bwa/libbwa.a htslib/libhts.a lib" mkdir -p lib && cp src/libseqlib.a fermi-lite/libfml.a bwa/libbwa.a htslib/libhts.a lib make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install # Trick to get also headers moved by d-shlibmove cp -a SeqLib debian # note: also GenomicRegionCollection.cpp is really needed by freebayes d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/SeqLib usr/include \ --override s/libfml0-dev/libfml-dev/ \ --override s/libssw0-dev/libssw-dev/ \ src/.libs/libseqlib.so Library package automatic movement utility --> libfml-dev package exists. --> libhts-dev package exists. --> libjsoncpp-dev package exists. --> libssw-dev package exists. --> zlib1g-dev package exists. set -e install -d -m 755 debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf install -d -m 755 debian/libseqlib2/usr/lib/arm-linux-gnueabihf mv src/.libs/libseqlib.a debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf mv src/.libs/libseqlib.so debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf mv /<>/src/.libs/libseqlib.so.2 debian/libseqlib2/usr/lib/arm-linux-gnueabihf mv /<>/src/.libs/libseqlib.so.2.0.0 debian/libseqlib2/usr/lib/arm-linux-gnueabihf PKGDEV=libseqlib-dev PKGSHL=libseqlib2 install -d -m 755 debian/libseqlib-dev/usr/include mv debian/SeqLib debian/libseqlib-dev/usr/include mkdir -p /<>/debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf/pkgconfig mv libseqlib.pc /<>/debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf/pkgconfig make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dpkg-shlibdeps: warning: symbol bwa_idx_load used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol kseq_init used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bns_dump used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwt_gen_cnt_table used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwt_cal_sa used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwt_dump_sa used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwa_fill_scmat used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol err_fflush used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol err_xopen_core used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwt_dump_bwt used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'libseqlib2' in '../libseqlib2_1.2.0+dfsg-11_armhf.deb'. dpkg-deb: building package 'libseqlib2-dbgsym' in '../libseqlib2-dbgsym_1.2.0+dfsg-11_armhf.deb'. dpkg-deb: building package 'libseqlib-dev' in '../libseqlib-dev_1.2.0+dfsg-11_armhf.deb'. dpkg-genbuildinfo --build=any -O../libseqlib_1.2.0+dfsg-11_armhf.buildinfo dpkg-genchanges --build=any -O../libseqlib_1.2.0+dfsg-11_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2025-07-10T02:53:48Z +------------------------------------------------------------------------------+ | Finished Timed Build Commands | +------------------------------------------------------------------------------+ rm -Rf /<>/ ---------------------------------------------------- I: Finished running 'rm -Rf /<>/'. Finished processing commands. -------------------------------------------------------------------------------- Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libseqlib_1.2.0+dfsg-11_armhf.changes: -------------------------------------- Format: 1.8 Date: Thu, 14 Dec 2023 23:01:06 +0100 Source: libseqlib Binary: libseqlib-dev libseqlib2 libseqlib2-dbgsym Built-For-Profiles: cross nocheck Architecture: armhf Version: 1.2.0+dfsg-11 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: libseqlib-dev - C++ htslib/bwa-mem/fermi interface for interrogating sequence dat libseqlib2 - C++ htslib/bwa-mem/fermi interface for interrogating sequence dat Closes: 1047821 Changes: libseqlib (1.2.0+dfsg-11) unstable; urgency=medium . * d/clean: new: cleanup leftovers. (Closes: #1047821) Checksums-Sha1: 2171981a65399ce60503595a3797e1c5c34e963e 211360 libseqlib-dev_1.2.0+dfsg-11_armhf.deb 98ec7b7224e68e0a4b5c265b77d88155db15b8c9 2255196 libseqlib2-dbgsym_1.2.0+dfsg-11_armhf.deb c876f0050a3f61cb1ac3e6f727bfdafe2ce0b6bb 141444 libseqlib2_1.2.0+dfsg-11_armhf.deb 8c1aa324e495fc07f27df8a94a6e2ffac008f665 8159 libseqlib_1.2.0+dfsg-11_armhf.buildinfo Checksums-Sha256: b7eb9b40e91e0c6276bf00c0f54b857f10d2be66e09bfb886d23898a02df8325 211360 libseqlib-dev_1.2.0+dfsg-11_armhf.deb 3a8229839aea13b770d0a5f8fd74e8914adf46cf7e530af2752a90f63dc2b6f6 2255196 libseqlib2-dbgsym_1.2.0+dfsg-11_armhf.deb d7414c7fa3a9178d84ac3051f3903c1ba7e5422cfb7407b3f4689703b8a820c3 141444 libseqlib2_1.2.0+dfsg-11_armhf.deb 4fc27611b3ac4477997781f53960893f350847c94822fe3d000c35e1068597f4 8159 libseqlib_1.2.0+dfsg-11_armhf.buildinfo Files: ccbb7dfeb80e9b6c7feaee899bf3789c 211360 libdevel optional libseqlib-dev_1.2.0+dfsg-11_armhf.deb 56fdd6b4a2cd75a91f1560ebafc43340 2255196 debug optional libseqlib2-dbgsym_1.2.0+dfsg-11_armhf.deb 43af40e17d3cc06c70f26c12e7a3563a 141444 libs optional libseqlib2_1.2.0+dfsg-11_armhf.deb 10e3f93fb4f903d902ad6d02ab2ce891 8159 science optional libseqlib_1.2.0+dfsg-11_armhf.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: libseqlib Binary: libseqlib-dev libseqlib2 libseqlib2-dbgsym Architecture: armhf Version: 1.2.0+dfsg-11 Checksums-Md5: ccbb7dfeb80e9b6c7feaee899bf3789c 211360 libseqlib-dev_1.2.0+dfsg-11_armhf.deb 56fdd6b4a2cd75a91f1560ebafc43340 2255196 libseqlib2-dbgsym_1.2.0+dfsg-11_armhf.deb 43af40e17d3cc06c70f26c12e7a3563a 141444 libseqlib2_1.2.0+dfsg-11_armhf.deb Checksums-Sha1: 2171981a65399ce60503595a3797e1c5c34e963e 211360 libseqlib-dev_1.2.0+dfsg-11_armhf.deb 98ec7b7224e68e0a4b5c265b77d88155db15b8c9 2255196 libseqlib2-dbgsym_1.2.0+dfsg-11_armhf.deb c876f0050a3f61cb1ac3e6f727bfdafe2ce0b6bb 141444 libseqlib2_1.2.0+dfsg-11_armhf.deb Checksums-Sha256: b7eb9b40e91e0c6276bf00c0f54b857f10d2be66e09bfb886d23898a02df8325 211360 libseqlib-dev_1.2.0+dfsg-11_armhf.deb 3a8229839aea13b770d0a5f8fd74e8914adf46cf7e530af2752a90f63dc2b6f6 2255196 libseqlib2-dbgsym_1.2.0+dfsg-11_armhf.deb d7414c7fa3a9178d84ac3051f3903c1ba7e5422cfb7407b3f4689703b8a820c3 141444 libseqlib2_1.2.0+dfsg-11_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Thu, 10 Jul 2025 02:53:48 +0000 Build-Path: /<> Installed-Build-Depends: apt (= 3.0.3), autoconf (= 2.72-3.1), automake (= 1:1.17-4), autopoint (= 0.23.1-2), autotools-dev (= 20240727.1), base-files (= 13.8), base-passwd (= 3.6.7), bash (= 5.2.37-2+b3), binutils (= 2.44-3), binutils-common (= 2.44-3), binutils-x86-64-linux-gnu (= 2.44-3), bsdextrautils (= 2.41-5), bsdutils (= 1:2.41-5), build-essential (= 12.12), bzip2 (= 1.0.8-6), comerr-dev (= 2.1-1.47.2-3+b1), coreutils (= 9.7-3), cpp (= 4:14.2.0-1), cpp-14 (= 14.2.0-19), cpp-14-x86-64-linux-gnu (= 14.2.0-19), cpp-x86-64-linux-gnu (= 4:14.2.0-1), d-shlibs (= 0.109), dash (= 0.5.12-12), debconf (= 1.5.91), debhelper (= 13.24.2), debian-archive-keyring (= 2025.1), debianutils (= 5.23.1), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.1-2), diffutils (= 1:3.10-4), dpkg (= 1.22.21), dpkg-dev (= 1.22.21), dwz (= 0.15-1+b1), file (= 1:5.46-5), findutils (= 4.10.0-3), g++ (= 4:14.2.0-1), g++-14 (= 14.2.0-19), g++-14-x86-64-linux-gnu (= 14.2.0-19), g++-x86-64-linux-gnu (= 4:14.2.0-1), gcc (= 4:14.2.0-1), gcc-14 (= 14.2.0-19), gcc-14-base (= 14.2.0-19), gcc-14-x86-64-linux-gnu (= 14.2.0-19), gcc-x86-64-linux-gnu (= 4:14.2.0-1), gettext (= 0.23.1-2), gettext-base (= 0.23.1-2), grep (= 3.11-4), groff-base (= 1.23.0-9), gzip (= 1.13-1), hostname (= 3.25), init-system-helpers (= 1.68), intltool-debian (= 0.35.0+20060710.6), krb5-multidev (= 1.21.3-5), libacl1 (= 2.3.2-2+b1), libapt-pkg7.0 (= 3.0.3), libarchive-zip-perl (= 1.68-1), libasan8 (= 14.2.0-19), libatomic1 (= 14.2.0-19), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.0.5-1), libaudit1 (= 1:4.0.5-1), libbinutils (= 2.44-3), libblkid1 (= 2.41-5), libbrotli-dev (= 1.1.0-2+b7), libbrotli1 (= 1.1.0-2+b7), libbwa-dev (= 0.7.18-1), libbz2-1.0 (= 1.0.8-6), libbz2-dev (= 1.0.8-6), libc-bin (= 2.41-9), libc-dev-bin (= 2.41-9), libc6 (= 2.41-9), libc6-dev (= 2.41-9), libcap-ng0 (= 0.8.5-4+b1), libcap2 (= 1:2.75-9), libcc1-0 (= 14.2.0-19), libcom-err2 (= 1.47.2-3+b1), libcrypt-dev (= 1:4.4.38-1), libcrypt1 (= 1:4.4.38-1), libctf-nobfd0 (= 2.44-3), libctf0 (= 2.44-3), libcurl3t64-gnutls (= 8.14.1-2), libcurl4-gnutls-dev (= 8.14.1-2), libdb5.3t64 (= 5.3.28+dfsg2-9), libdebconfclient0 (= 0.279), libdebhelper-perl (= 13.24.2), libdeflate-dev (= 1.23-2), libdeflate0 (= 1.23-2), libdpkg-perl (= 1.22.21), libelf1t64 (= 0.192-4), libevent-2.1-7t64 (= 2.1.12-stable-10+b1), libexpat1 (= 2.7.1-1), libffi8 (= 3.4.8-2), libfile-stripnondeterminism-perl (= 1.14.1-2), libfml-dev (= 0.1+git20221215.85f159e-1), libfml0 (= 0.1+git20221215.85f159e-1), libgcc-14-dev (= 14.2.0-19), libgcc-s1 (= 14.2.0-19), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgmp-dev (= 2:6.3.0+dfsg-3), libgmp10 (= 2:6.3.0+dfsg-3), libgmpxx4ldbl (= 2:6.3.0+dfsg-3), libgnutls-dane0t64 (= 3.8.9-3), libgnutls-openssl27t64 (= 3.8.9-3), libgnutls28-dev (= 3.8.9-3), libgnutls30t64 (= 3.8.9-3), libgomp1 (= 14.2.0-19), libgprofng0 (= 2.44-3), libgssapi-krb5-2 (= 1.21.3-5), libgssrpc4t64 (= 1.21.3-5), libhogweed6t64 (= 3.10.1-1), libhts-dev (= 1.21+ds-1), libhts3t64 (= 1.21+ds-1), libhtscodecs2 (= 1.6.1-2), libhwasan0 (= 14.2.0-19), libidn2-0 (= 2.3.8-2), libidn2-dev (= 2.3.8-2), libisl23 (= 0.27-1), libitm1 (= 14.2.0-19), libjansson4 (= 2.14-2+b3), libjsoncpp-dev (= 1.9.6-3), libjsoncpp26 (= 1.9.6-3), libk5crypto3 (= 1.21.3-5), libkadm5clnt-mit12 (= 1.21.3-5), libkadm5srv-mit12 (= 1.21.3-5), libkdb5-10t64 (= 1.21.3-5), libkeyutils1 (= 1.6.3-6), libkrb5-3 (= 1.21.3-5), libkrb5-dev (= 1.21.3-5), libkrb5support0 (= 1.21.3-5), liblastlog2-2 (= 2.41-5), libldap-dev (= 2.6.10+dfsg-1), libldap2 (= 2.6.10+dfsg-1), liblsan0 (= 14.2.0-19), liblz4-1 (= 1.10.0-4), liblzma-dev (= 5.8.1-1), liblzma5 (= 5.8.1-1), libmagic-mgc (= 1:5.46-5), libmagic1t64 (= 1:5.46-5), libmd0 (= 1.1.0-2+b1), libmount1 (= 2.41-5), libmpc3 (= 1.3.1-1+b3), libmpfr6 (= 4.2.2-1), libncursesw6 (= 6.5+20250216-2), libnettle8t64 (= 3.10.1-1), libnghttp2-14 (= 1.64.0-1.1), libnghttp2-dev (= 1.64.0-1.1), libnghttp3-9 (= 1.8.0-1), libnghttp3-dev (= 1.8.0-1), libngtcp2-16 (= 1.11.0-1), libngtcp2-crypto-gnutls-dev (= 1.11.0-1), libngtcp2-crypto-gnutls8 (= 1.11.0-1), libngtcp2-dev (= 1.11.0-1), libp11-kit-dev (= 0.25.5-3), libp11-kit0 (= 0.25.5-3), libpam-modules (= 1.7.0-5), libpam-modules-bin (= 1.7.0-5), libpam-runtime (= 1.7.0-5), libpam0g (= 1.7.0-5), libpcre2-8-0 (= 10.45-1), libperl5.40 (= 5.40.1-5), libpipeline1 (= 1.5.8-1), libpkgconf3 (= 1.8.1-4), libpsl-dev (= 0.21.2-1.1+b1), libpsl5t64 (= 0.21.2-1.1+b1), libpython3-stdlib (= 3.13.5-1), libpython3.13-minimal (= 3.13.5-2), libpython3.13-stdlib (= 3.13.5-2), libquadmath0 (= 14.2.0-19), libreadline8t64 (= 8.2-6), librtmp-dev (= 2.4+20151223.gitfa8646d.1-2+b5), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b5), libsasl2-2 (= 2.1.28+dfsg1-9), libsasl2-modules-db (= 2.1.28+dfsg1-9), libseccomp2 (= 2.6.0-2), libselinux1 (= 3.8.1-1), libsframe1 (= 2.44-3), libsmartcols1 (= 2.41-5), libsqlite3-0 (= 3.46.1-6), libssh2-1-dev (= 1.11.1-1), libssh2-1t64 (= 1.11.1-1), libssl-dev (= 3.5.0-2), libssl3t64 (= 3.5.0-2), libssw-dev (= 1.1-15+b2), libssw0 (= 1.1-15+b2), libstdc++-14-dev (= 14.2.0-19), libstdc++6 (= 14.2.0-19), libsystemd0 (= 257.7-1), libtasn1-6 (= 4.20.0-2), libtasn1-6-dev (= 4.20.0-2), libtinfo6 (= 6.5+20250216-2), libtool (= 2.5.4-4), libtsan2 (= 14.2.0-19), libubsan1 (= 14.2.0-19), libuchardet0 (= 0.0.8-1+b2), libudev1 (= 257.7-1), libunbound8 (= 1.22.0-1+b1), libunistring5 (= 1.3-2), libuuid1 (= 2.41-5), libxml2 (= 2.12.7+dfsg+really2.9.14-1), libxxhash0 (= 0.8.3-2), libyaml-0-2 (= 0.2.5-2), libzstd-dev (= 1.5.7+dfsg-1), libzstd1 (= 1.5.7+dfsg-1), linux-libc-dev (= 6.12.35-1), m4 (= 1.4.19-8), make (= 4.4.1-2), man-db (= 2.13.1-1), mawk (= 1.3.4.20250131-1), media-types (= 13.0.0), ncurses-base (= 6.5+20250216-2), ncurses-bin (= 6.5+20250216-2), netbase (= 6.5), nettle-dev (= 3.10.1-1), openssl-provider-legacy (= 3.5.0-2), patch (= 2.8-2), perl (= 5.40.1-5), perl-base (= 5.40.1-5), perl-modules-5.40 (= 5.40.1-5), pkg-config (= 1.8.1-4), pkg-kde-tools (= 0.18.12), pkgconf (= 1.8.1-4), pkgconf-bin (= 1.8.1-4), po-debconf (= 1.0.21+nmu1), python3 (= 3.13.5-1), python3-charset-normalizer (= 3.4.2-1), python3-debian (= 1.0.1), python3-minimal (= 3.13.5-1), python3-yaml (= 6.0.2-1+b2), python3.13 (= 3.13.5-2), python3.13-minimal (= 3.13.5-2), readline-common (= 8.2-6), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.25), sqv (= 1.3.0-3), sysvinit-utils (= 3.14-4), tar (= 1.35+dfsg-3.1), tzdata (= 2025b-4), util-linux (= 2.41-5), xz-utils (= 5.8.1-1), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1702591266" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libseqlib-dev_1.2.0+dfsg-11_armhf.deb ------------------------------------- new Debian package, version 2.0. size 211360 bytes: control archive=1752 bytes. 1335 bytes, 25 lines control 1735 bytes, 25 lines md5sums Package: libseqlib-dev Source: libseqlib Version: 1.2.0+dfsg-11 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 968 Depends: libseqlib2 (= 1.2.0+dfsg-11), libfml-dev, libhts-dev, libjsoncpp-dev, libssw-dev, zlib1g-dev, libbwa-dev Section: libdevel Priority: optional Multi-Arch: same Homepage: https://github.com/walaj/SeqLib Description: C++ htslib/bwa-mem/fermi interface for interrogating sequence data (dev) C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment. . This package contains the header files and static library. drwxr-xr-x root/root 0 2023-12-14 22:01 ./ drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/ drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/include/ drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/include/SeqLib/ -rw-r--r-- root/root 3874 2023-12-14 22:01 ./usr/include/SeqLib/BFC.h -rw-r--r-- root/root 7129 2021-01-07 04:18 ./usr/include/SeqLib/BWAWrapper.h -rw-r--r-- root/root 3605 2023-12-14 22:01 ./usr/include/SeqLib/BamHeader.h -rw-r--r-- root/root 9275 2021-01-07 04:18 ./usr/include/SeqLib/BamReader.h -rw-r--r-- root/root 32406 2023-12-14 22:01 ./usr/include/SeqLib/BamRecord.h -rw-r--r-- root/root 1979 2021-01-07 04:18 ./usr/include/SeqLib/BamWalker.h -rw-r--r-- root/root 3473 2021-01-07 04:18 ./usr/include/SeqLib/BamWriter.h -rw-r--r-- root/root 1170 2021-01-07 04:18 ./usr/include/SeqLib/FastqReader.h -rw-r--r-- root/root 4281 2023-12-14 22:01 ./usr/include/SeqLib/FermiAssembler.h -rw-r--r-- root/root 6354 2021-01-07 04:18 ./usr/include/SeqLib/GenomicRegion.h -rw-r--r-- root/root 19869 2021-01-07 04:18 ./usr/include/SeqLib/GenomicRegionCollection.cpp -rw-r--r-- root/root 11804 2021-01-07 04:18 ./usr/include/SeqLib/GenomicRegionCollection.h -rw-r--r-- root/root 7320 2021-01-07 04:18 ./usr/include/SeqLib/IntervalTree.h -rw-r--r-- root/root 17538 2021-01-07 04:18 ./usr/include/SeqLib/ReadFilter.h -rw-r--r-- root/root 1387 2023-12-14 22:01 ./usr/include/SeqLib/RefGenome.h -rw-r--r-- root/root 3832 2021-01-07 04:18 ./usr/include/SeqLib/SeqLibCommon.h -rw-r--r-- root/root 4176 2021-01-07 04:18 ./usr/include/SeqLib/SeqLibUtils.h -rw-r--r-- root/root 2455 2021-01-07 04:18 ./usr/include/SeqLib/SeqPlot.h -rw-r--r-- root/root 577 2021-01-07 04:18 ./usr/include/SeqLib/ThreadPool.h -rw-r--r-- root/root 2421 2021-01-07 04:18 ./usr/include/SeqLib/UnalignedSequence.h -rw-r--r-- root/root 17078 2021-01-07 04:18 ./usr/include/SeqLib/aho_corasick.hpp drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/lib/ drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/lib/arm-linux-gnueabihf/ -rw-r--r-- root/root 798090 2023-12-14 22:01 ./usr/lib/arm-linux-gnueabihf/libseqlib.a lrwxrwxrwx root/root 0 2023-12-14 22:01 ./usr/lib/arm-linux-gnueabihf/libseqlib.so -> libseqlib.so.2.0.0 drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/lib/arm-linux-gnueabihf/pkgconfig/ -rw-r--r-- root/root 301 2023-12-14 22:01 ./usr/lib/arm-linux-gnueabihf/pkgconfig/libseqlib.pc drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/share/ drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/share/doc/ drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/share/doc/libseqlib-dev/ -rw-r--r-- root/root 1718 2023-12-14 22:01 ./usr/share/doc/libseqlib-dev/changelog.Debian.gz -rw-r--r-- root/root 2658 2023-12-14 22:01 ./usr/share/doc/libseqlib-dev/copyright libseqlib2-dbgsym_1.2.0+dfsg-11_armhf.deb ----------------------------------------- new Debian package, version 2.0. size 2255196 bytes: control archive=556 bytes. 411 bytes, 13 lines control 106 bytes, 1 lines md5sums Package: libseqlib2-dbgsym Source: libseqlib Version: 1.2.0+dfsg-11 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 2304 Depends: libseqlib2 (= 1.2.0+dfsg-11) Section: debug Priority: optional Multi-Arch: same Description: debug symbols for libseqlib2 Build-Ids: c5712a9b2dc60f04e97d292c8955f331fe963730 drwxr-xr-x root/root 0 2023-12-14 22:01 ./ drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/ drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/lib/ drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/lib/debug/ drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/lib/debug/.build-id/c5/ -rw-r--r-- root/root 2348584 2023-12-14 22:01 ./usr/lib/debug/.build-id/c5/712a9b2dc60f04e97d292c8955f331fe963730.debug drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/share/ drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/share/doc/ lrwxrwxrwx root/root 0 2023-12-14 22:01 ./usr/share/doc/libseqlib2-dbgsym -> libseqlib2 libseqlib2_1.2.0+dfsg-11_armhf.deb ---------------------------------- new Debian package, version 2.0. size 141444 bytes: control archive=1244 bytes. 1338 bytes, 23 lines control 229 bytes, 3 lines md5sums 39 bytes, 1 lines shlibs 68 bytes, 2 lines triggers Package: libseqlib2 Source: libseqlib Version: 1.2.0+dfsg-11 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 338 Depends: libc6 (>= 2.38), libfml0 (>= 0.1+git20190320.b499514), libgcc-s1 (>= 3.5), libhts3t64 (>= 1.17), libjsoncpp26 (>= 1.9.6), libssw0 (>= 1.1), libstdc++6 (>= 13.1), zlib1g (>= 1:1.2.3.3) Section: libs Priority: optional Multi-Arch: same Homepage: https://github.com/walaj/SeqLib Description: C++ htslib/bwa-mem/fermi interface for interrogating sequence data C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment. drwxr-xr-x root/root 0 2023-12-14 22:01 ./ drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/ drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/lib/ drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/lib/arm-linux-gnueabihf/ lrwxrwxrwx root/root 0 2023-12-14 22:01 ./usr/lib/arm-linux-gnueabihf/libseqlib.so.2 -> libseqlib.so.2.0.0 -rw-r--r-- root/root 329636 2023-12-14 22:01 ./usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/share/ drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/share/doc/ drwxr-xr-x root/root 0 2023-12-14 22:01 ./usr/share/doc/libseqlib2/ -rw-r--r-- root/root 1718 2023-12-14 22:01 ./usr/share/doc/libseqlib2/changelog.Debian.gz -rw-r--r-- root/root 2658 2023-12-14 22:01 ./usr/share/doc/libseqlib2/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: warning: root directory /<>/sbuild-build-depends-lintian-dummy has unusual owner or group 1000:119 dpkg-deb: hint: you might need to pass --root-owner-group, see for further details dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1486 B] Get:5 copy:/<>/apt_archive ./ Packages [1551 B] Fetched 3652 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: appstream ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libappstream5 libapt-pkg-perl libassuan9 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libbrotli1 libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcom-err2 libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libcurl3t64-gnutls libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfile-sharedir-perl libfont-ttf-perl libgcrypt20 libglib2.0-0t64 libgnutls30t64 libgpg-error0 libgssapi-krb5-2 libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libidn2-0 libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libksba8 libldap2 liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnpth0t64 libnumber-compare-perl libp11-kit0 libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libproc2-0 libpsl5t64 libregexp-wildcards-perl librole-tiny-perl librtmp1 libsasl2-2 libsasl2-modules-db libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libssh2-1t64 libstemmer0d libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libtasn1-6 libterm-readkey-perl libtext-charwidth-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-wrapi18n-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl libyaml-libyaml-perl lintian lzop openssl patchutils perl-openssl-defaults plzip procps shared-mime-info t1utils ucf unzip Suggested packages: apt-config-icons isoquery libxml-parser-perl rng-tools low-memory-monitor gnutls-bin krb5-doc krb5-user libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libmime-base32-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl zip Recommended packages: gnupg libcgi-fast-perl libglib2.0-data xdg-user-dirs libgpg-error-l10n libhtml-format-perl libio-compress-brotli-perl krb5-locales libldap-common liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl publicsuffix libsasl2-modules libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl libxml-sax-expat-perl psmisc linux-sysctl-defaults The following NEW packages will be installed: appstream ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libappstream5 libapt-pkg-perl libassuan9 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libbrotli1 libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcom-err2 libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libcurl3t64-gnutls libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfile-sharedir-perl libfont-ttf-perl libgcrypt20 libglib2.0-0t64 libgnutls30t64 libgpg-error0 libgssapi-krb5-2 libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libidn2-0 libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libksba8 libldap2 liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnpth0t64 libnumber-compare-perl libp11-kit0 libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libproc2-0 libpsl5t64 libregexp-wildcards-perl librole-tiny-perl librtmp1 libsasl2-2 libsasl2-modules-db libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libssh2-1t64 libstemmer0d libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libtasn1-6 libterm-readkey-perl libtext-charwidth-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-wrapi18n-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl libyaml-libyaml-perl lintian lzop openssl patchutils perl-openssl-defaults plzip procps sbuild-build-depends-lintian-dummy:armhf shared-mime-info t1utils ucf unzip 0 upgraded, 168 newly installed, 0 to remove and 0 not upgraded. Need to get 22.2 MB of archives. After this operation, 86.8 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://localhost:3142/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-8 [65.4 kB] Get:3 http://localhost:3142/debian unstable/main amd64 procps amd64 2:4.0.4-8 [881 kB] Get:4 http://localhost:3142/debian unstable/main amd64 openssl amd64 3.5.0-2 [1490 kB] Get:5 http://localhost:3142/debian unstable/main amd64 ca-certificates all 20250419 [162 kB] Get:6 http://localhost:3142/debian unstable/main amd64 libtext-charwidth-perl amd64 0.04-11+b4 [9476 B] Get:7 http://localhost:3142/debian unstable/main amd64 libtext-wrapi18n-perl all 0.06-10 [8808 B] Get:8 http://localhost:3142/debian unstable/main amd64 ucf all 3.0052 [43.3 kB] Get:9 http://localhost:3142/debian unstable/main amd64 libglib2.0-0t64 amd64 2.84.3-1 [1515 kB] Get:10 http://localhost:3142/debian unstable/main amd64 shared-mime-info amd64 2.4-5+b2 [760 kB] Get:11 http://localhost:3142/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b7 [307 kB] Get:12 http://localhost:3142/debian unstable/main amd64 libidn2-0 amd64 2.3.8-2 [109 kB] Get:13 http://localhost:3142/debian unstable/main amd64 libp11-kit0 amd64 0.25.5-3 [425 kB] Get:14 http://localhost:3142/debian unstable/main amd64 libtasn1-6 amd64 4.20.0-2 [49.9 kB] Get:15 http://localhost:3142/debian unstable/main amd64 libgnutls30t64 amd64 3.8.9-3 [1465 kB] Get:16 http://localhost:3142/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-5 [33.0 kB] Get:17 http://localhost:3142/debian unstable/main amd64 libcom-err2 amd64 1.47.2-3+b1 [25.0 kB] Get:18 http://localhost:3142/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-5 [81.5 kB] Get:19 http://localhost:3142/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-6 [9456 B] Get:20 http://localhost:3142/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-5 [326 kB] Get:21 http://localhost:3142/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-5 [138 kB] Get:22 http://localhost:3142/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-9 [19.8 kB] Get:23 http://localhost:3142/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-9 [57.5 kB] Get:24 http://localhost:3142/debian unstable/main amd64 libldap2 amd64 2.6.10+dfsg-1 [194 kB] Get:25 http://localhost:3142/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1.1 [76.0 kB] Get:26 http://localhost:3142/debian unstable/main amd64 libnghttp3-9 amd64 1.8.0-1 [67.7 kB] Get:27 http://localhost:3142/debian unstable/main amd64 libngtcp2-16 amd64 1.11.0-1 [131 kB] Get:28 http://localhost:3142/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.11.0-1 [29.3 kB] Get:29 http://localhost:3142/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get:30 http://localhost:3142/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get:31 http://localhost:3142/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get:32 http://localhost:3142/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.14.1-2 [384 kB] Get:33 http://localhost:3142/debian unstable/main amd64 libstemmer0d amd64 2.2.0-4+b2 [119 kB] Get:34 http://localhost:3142/debian unstable/main amd64 libxmlb2 amd64 0.3.22-1 [63.1 kB] Get:35 http://localhost:3142/debian unstable/main amd64 libappstream5 amd64 1.0.5-1 [226 kB] Get:36 http://localhost:3142/debian unstable/main amd64 appstream amd64 1.0.5-1 [538 kB] Get:37 http://localhost:3142/debian unstable/main amd64 diffstat amd64 1.67-1 [35.5 kB] Get:38 http://localhost:3142/debian unstable/main amd64 libgpg-error0 amd64 1.51-4 [82.1 kB] Get:39 http://localhost:3142/debian unstable/main amd64 libassuan9 amd64 3.0.2-2 [61.5 kB] Get:40 http://localhost:3142/debian unstable/main amd64 libgcrypt20 amd64 1.11.0-7 [843 kB] Get:41 http://localhost:3142/debian unstable/main amd64 gpgconf amd64 2.4.7-21+b1 [129 kB] Get:42 http://localhost:3142/debian unstable/main amd64 libksba8 amd64 1.6.7-2+b1 [136 kB] Get:43 http://localhost:3142/debian unstable/main amd64 libnpth0t64 amd64 1.8-3 [23.2 kB] Get:44 http://localhost:3142/debian unstable/main amd64 gpg amd64 2.4.7-21+b1 [635 kB] Get:45 http://localhost:3142/debian unstable/main amd64 iso-codes all 4.18.0-1 [3125 kB] Get:46 http://localhost:3142/debian unstable/main amd64 libaliased-perl all 0.34-3 [13.5 kB] Get:47 http://localhost:3142/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.42 [68.3 kB] Get:48 http://localhost:3142/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b2 [10.6 kB] Get:49 http://localhost:3142/debian unstable/main amd64 libdynaloader-functions-perl all 0.004-2 [12.2 kB] Get:50 http://localhost:3142/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.009-2 [15.6 kB] Get:51 http://localhost:3142/debian unstable/main amd64 libparams-classify-perl amd64 0.015-2+b4 [22.5 kB] Get:52 http://localhost:3142/debian unstable/main amd64 libmodule-runtime-perl all 0.018-1 [17.8 kB] Get:53 http://localhost:3142/debian unstable/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get:54 http://localhost:3142/debian unstable/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:55 http://localhost:3142/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:56 http://localhost:3142/debian unstable/main amd64 libvariable-magic-perl amd64 0.64-1+b1 [44.9 kB] Get:57 http://localhost:3142/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.28-2 [17.6 kB] Get:58 http://localhost:3142/debian unstable/main amd64 libberkeleydb-perl amd64 0.66-1 [121 kB] Get:59 http://localhost:3142/debian unstable/main amd64 libcapture-tiny-perl all 0.50-1 [24.6 kB] Get:60 http://localhost:3142/debian unstable/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:61 http://localhost:3142/debian unstable/main amd64 liburi-perl all 5.30-1 [105 kB] Get:62 http://localhost:3142/debian unstable/main amd64 libhtml-parser-perl amd64 3.83-1+b2 [99.7 kB] Get:63 http://localhost:3142/debian unstable/main amd64 libcgi-pm-perl all 4.68-1 [217 kB] Get:64 http://localhost:3142/debian unstable/main amd64 libclass-data-inheritable-perl all 0.10-1 [8632 B] Get:65 http://localhost:3142/debian unstable/main amd64 libclass-inspector-perl all 1.36-3 [17.5 kB] Get:66 http://localhost:3142/debian unstable/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:67 http://localhost:3142/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b5 [36.1 kB] Get:68 http://localhost:3142/debian unstable/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get:69 http://localhost:3142/debian unstable/main amd64 libconfig-tiny-perl all 2.30-1 [18.9 kB] Get:70 http://localhost:3142/debian unstable/main amd64 libparams-util-perl amd64 1.102-3+b1 [24.4 kB] Get:71 http://localhost:3142/debian unstable/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get:72 http://localhost:3142/debian unstable/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:73 http://localhost:3142/debian unstable/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:74 http://localhost:3142/debian unstable/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:75 http://localhost:3142/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.39-1 [130 kB] Get:76 http://localhost:3142/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:77 http://localhost:3142/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:78 http://localhost:3142/debian unstable/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:79 http://localhost:3142/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:80 http://localhost:3142/debian unstable/main amd64 libdata-dpath-perl all 0.60-1 [41.8 kB] Get:81 http://localhost:3142/debian unstable/main amd64 libdata-messagepack-perl amd64 1.02-2 [32.6 kB] Get:82 http://localhost:3142/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-4 [31.5 kB] Get:83 http://localhost:3142/debian unstable/main amd64 libdata-validate-domain-perl all 0.15-1 [11.9 kB] Get:84 http://localhost:3142/debian unstable/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:85 http://localhost:3142/debian unstable/main amd64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:86 http://localhost:3142/debian unstable/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2+b5 [98.1 kB] Get:87 http://localhost:3142/debian unstable/main amd64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:88 http://localhost:3142/debian unstable/main amd64 libdata-validate-uri-perl all 0.07-3 [11.0 kB] Get:89 http://localhost:3142/debian unstable/main amd64 libdevel-size-perl amd64 0.84-1+b1 [24.2 kB] Get:90 http://localhost:3142/debian unstable/main amd64 libemail-address-xs-perl amd64 1.05-1+b4 [29.4 kB] Get:91 http://localhost:3142/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:92 http://localhost:3142/debian unstable/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:93 http://localhost:3142/debian unstable/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:94 http://localhost:3142/debian unstable/main amd64 libnumber-compare-perl all 0.03-3 [6332 B] Get:95 http://localhost:3142/debian unstable/main amd64 libtext-glob-perl all 0.11-3 [7676 B] Get:96 http://localhost:3142/debian unstable/main amd64 libfile-find-rule-perl all 0.34-4 [25.6 kB] Get:97 http://localhost:3142/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:98 http://localhost:3142/debian unstable/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:99 http://localhost:3142/debian unstable/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:100 http://localhost:3142/debian unstable/main amd64 libfile-sharedir-perl all 1.118-3 [16.0 kB] Get:101 http://localhost:3142/debian unstable/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:102 http://localhost:3142/debian unstable/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:103 http://localhost:3142/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:104 http://localhost:3142/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:105 http://localhost:3142/debian unstable/main amd64 libhttp-message-perl all 7.00-2 [79.8 kB] Get:106 http://localhost:3142/debian unstable/main amd64 libhtml-form-perl all 6.12-1 [32.3 kB] Get:107 http://localhost:3142/debian unstable/main amd64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:108 http://localhost:3142/debian unstable/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:109 http://localhost:3142/debian unstable/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:110 http://localhost:3142/debian unstable/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:111 http://localhost:3142/debian unstable/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get:112 http://localhost:3142/debian unstable/main amd64 libnet-ssleay-perl amd64 1.94-3 [339 kB] Get:113 http://localhost:3142/debian unstable/main amd64 libio-socket-ssl-perl all 2.089-1 [223 kB] Get:114 http://localhost:3142/debian unstable/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:115 http://localhost:3142/debian unstable/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get:116 http://localhost:3142/debian unstable/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:117 http://localhost:3142/debian unstable/main amd64 libwww-perl all 6.78-1 [183 kB] Get:118 http://localhost:3142/debian unstable/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:119 http://localhost:3142/debian unstable/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:120 http://localhost:3142/debian unstable/main amd64 libio-interactive-perl all 1.027-1 [11.8 kB] Get:121 http://localhost:3142/debian unstable/main amd64 libipc-run3-perl all 0.049-1 [31.5 kB] Get:122 http://localhost:3142/debian unstable/main amd64 libjson-maybexs-perl all 1.004008-1 [12.9 kB] Get:123 http://localhost:3142/debian unstable/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:124 http://localhost:3142/debian unstable/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:125 http://localhost:3142/debian unstable/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:126 http://localhost:3142/debian unstable/main amd64 liblz1 amd64 1.15-3 [39.0 kB] Get:127 http://localhost:3142/debian unstable/main amd64 liblzo2-2 amd64 2.10-3+b1 [55.1 kB] Get:128 http://localhost:3142/debian unstable/main amd64 libmarkdown2 amd64 2.2.7-2.1 [36.0 kB] Get:129 http://localhost:3142/debian unstable/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:130 http://localhost:3142/debian unstable/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:131 http://localhost:3142/debian unstable/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:132 http://localhost:3142/debian unstable/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:133 http://localhost:3142/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:134 http://localhost:3142/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:135 http://localhost:3142/debian unstable/main amd64 libmouse-perl amd64 2.5.11-1+b1 [144 kB] Get:136 http://localhost:3142/debian unstable/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:137 http://localhost:3142/debian unstable/main amd64 libsub-identify-perl amd64 0.14-3+b3 [11.3 kB] Get:138 http://localhost:3142/debian unstable/main amd64 libsub-name-perl amd64 0.28-1 [12.2 kB] Get:139 http://localhost:3142/debian unstable/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:140 http://localhost:3142/debian unstable/main amd64 libpath-tiny-perl all 0.148-1 [56.7 kB] Get:141 http://localhost:3142/debian unstable/main amd64 libperlio-gzip-perl amd64 0.20-1+b4 [17.5 kB] Get:142 http://localhost:3142/debian unstable/main amd64 libperlio-utf8-strict-perl amd64 0.010-1+b3 [11.4 kB] Get:143 http://localhost:3142/debian unstable/main amd64 libproc-processtable-perl amd64 0.636-1+b3 [42.3 kB] Get:144 http://localhost:3142/debian unstable/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:145 http://localhost:3142/debian unstable/main amd64 libsereal-decoder-perl amd64 5.004+ds-1+b3 [100 kB] Get:146 http://localhost:3142/debian unstable/main amd64 libsereal-encoder-perl amd64 5.004+ds-1+b3 [104 kB] Get:147 http://localhost:3142/debian unstable/main amd64 libsort-versions-perl all 1.62-3 [8928 B] Get:148 http://localhost:3142/debian unstable/main amd64 libxs-parse-keyword-perl amd64 0.48-2 [65.7 kB] Get:149 http://localhost:3142/debian unstable/main amd64 libsyntax-keyword-try-perl amd64 0.30-1+b1 [27.4 kB] Get:150 http://localhost:3142/debian unstable/main amd64 libterm-readkey-perl amd64 2.38-2+b4 [24.6 kB] Get:151 http://localhost:3142/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b4 [8720 B] Get:152 http://localhost:3142/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.18-1 [13.1 kB] Get:153 http://localhost:3142/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.9-2+b1 [174 kB] Get:154 http://localhost:3142/debian unstable/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:155 http://localhost:3142/debian unstable/main amd64 libtime-moment-perl amd64 0.44-2+b4 [73.2 kB] Get:156 http://localhost:3142/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-3 [20.1 kB] Get:157 http://localhost:3142/debian unstable/main amd64 libwww-mechanize-perl all 2.19-1 [114 kB] Get:158 http://localhost:3142/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:159 http://localhost:3142/debian unstable/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:160 http://localhost:3142/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-4 [53.4 kB] Get:161 http://localhost:3142/debian unstable/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-5+b2 [314 kB] Get:162 http://localhost:3142/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.903.0+ds-1 [35.4 kB] Get:163 http://localhost:3142/debian unstable/main amd64 plzip amd64 1.12-3 [65.0 kB] Get:164 http://localhost:3142/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:165 http://localhost:3142/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:166 http://localhost:3142/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:167 http://localhost:3142/debian unstable/main amd64 unzip amd64 6.0-29 [173 kB] Get:168 http://localhost:3142/debian unstable/main amd64 lintian all 2.122.0 [1063 kB] Preconfiguring packages ... Fetched 22.2 MB in 0s (171 MB/s) Selecting previously unselected package libproc2-0:amd64. (Reading database ... 21257 files and directories currently installed.) Preparing to unpack .../000-libproc2-0_2%3a4.0.4-8_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-8) ... Selecting previously unselected package procps. Preparing to unpack .../001-procps_2%3a4.0.4-8_amd64.deb ... Unpacking procps (2:4.0.4-8) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.5.0-2_amd64.deb ... Unpacking openssl (3.5.0-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20250419_all.deb ... Unpacking ca-certificates (20250419) ... Selecting previously unselected package libtext-charwidth-perl:amd64. Preparing to unpack .../004-libtext-charwidth-perl_0.04-11+b4_amd64.deb ... Unpacking libtext-charwidth-perl:amd64 (0.04-11+b4) ... Selecting previously unselected package libtext-wrapi18n-perl. 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Selecting previously unselected package libhtml-tokeparser-simple-perl. Preparing to unpack .../116-libhtml-tokeparser-simple-perl_3.16-4_all.deb ... Unpacking libhtml-tokeparser-simple-perl (3.16-4) ... Selecting previously unselected package libimport-into-perl. Preparing to unpack .../117-libimport-into-perl_1.002005-2_all.deb ... Unpacking libimport-into-perl (1.002005-2) ... Selecting previously unselected package libio-interactive-perl. Preparing to unpack .../118-libio-interactive-perl_1.027-1_all.deb ... Unpacking libio-interactive-perl (1.027-1) ... Selecting previously unselected package libipc-run3-perl. Preparing to unpack .../119-libipc-run3-perl_0.049-1_all.deb ... Unpacking libipc-run3-perl (0.049-1) ... Selecting previously unselected package libjson-maybexs-perl. Preparing to unpack .../120-libjson-maybexs-perl_1.004008-1_all.deb ... Unpacking libjson-maybexs-perl (1.004008-1) ... Selecting previously unselected package liblist-compare-perl. 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Setting up plzip (1.12-3) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libtext-charwidth-perl:amd64 (0.04-11+b4) ... Setting up libnpth0t64:amd64 (1.8-3) ... Setting up libkeyutils1:amd64 (1.6.3-6) ... Setting up libunicode-utf8-perl (0.62-3) ... Setting up libmouse-perl:amd64 (2.5.11-1+b1) ... Setting up libgpg-error0:amd64 (1.51-4) ... Setting up libdata-messagepack-perl (1.02-2) ... Setting up libclass-inspector-perl (1.36-3) ... Setting up libdynaloader-functions-perl (0.004-2) ... Setting up libtext-glob-perl (0.11-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:amd64 (0.47-1+b1) ... Setting up libsub-identify-perl (0.14-3+b3) ... Setting up libcpanel-json-xs-perl:amd64 (4.39-1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdevel-size-perl (0.84-1+b1) ... Setting up unzip (6.0-29) ... Setting up libbrotli1:amd64 (1.1.0-2+b7) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.903.0+ds-1) ... Setting up libio-interactive-perl (1.027-1) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up libnghttp2-14:amd64 (1.64.0-1.1) ... Setting up perl-openssl-defaults:amd64 (7+b2) ... Setting up libmldbm-perl (2.05-4) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up libgcrypt20:amd64 (1.11.0-7) ... Setting up liblzo2-2:amd64 (2.10-3+b1) ... Setting up libtime-moment-perl (0.44-2+b4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libidn2-0:amd64 (2.3.8-2) ... Setting up libcom-err2:amd64 (1.47.2-3+b1) ... Setting up libconfig-tiny-perl (2.30-1) ... 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Setting up libassuan9:amd64 (3.0.2-2) ... Setting up procps (2:4.0.4-8) ... Setting up gpgconf (2.4.7-21+b1) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libtasn1-6:amd64 (4.20.0-2) ... Setting up libipc-run3-perl (0.049-1) ... Setting up libregexp-wildcards-perl (1.05-3) ... Setting up libfile-sharedir-perl (1.118-3) ... Setting up libaliased-perl (0.34-3) ... Setting up libngtcp2-16:amd64 (1.11.0-1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006008-1) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libclass-xsaccessor-perl (1.19-4+b5) ... Setting up libkrb5-3:amd64 (1.21.3-5) ... Setting up libstemmer0d:amd64 (2.2.0-4+b2) ... Setting up libsort-versions-perl (1.62-3) ... Setting up libssh2-1t64:amd64 (1.11.1-1) ... Setting up libterm-readkey-perl (2.38-2+b4) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.5.0-2) ... Setting up libtext-levenshteinxs-perl (0.03-5+b4) ... Setting up libperlio-gzip-perl (0.20-1+b4) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.004+ds-1+b3) ... Setting up libmarkdown2:amd64 (2.2.7-2.1) ... Setting up libldap2:amd64 (2.6.10+dfsg-1) ... Setting up liburi-perl (5.30-1) ... Setting up iso-codes (4.18.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b4) ... Setting up libnet-ssleay-perl:amd64 (1.94-3) ... Setting up libgnutls30t64:amd64 (3.8.9-3) ... Setting up libksba8:amd64 (1.6.7-2+b1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libxmlb2:amd64 (0.3.22-1) ... Setting up libpsl5t64:amd64 (0.21.2-1.1+b1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libtext-markdown-discount-perl (0.18-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:amd64 (0.009-2) ... Setting up ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 150 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-3) ... Setting up libxs-parse-keyword-perl (0.48-2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-5) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up ucf (3.0052) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libsyntax-keyword-try-perl (0.30-1+b1) ... Setting up libhtml-parser-perl:amd64 (3.83-1+b2) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up gpg (2.4.7-21+b1) ... Setting up libngtcp2-crypto-gnutls8:amd64 (1.11.0-1) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libhtml-form-perl (6.12-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b4) ... Setting up libcgi-pm-perl (4.68-1) ... Setting up libcurl3t64-gnutls:amd64 (8.14.1-2) ... Setting up libappstream5:amd64 (1.0.5-1) ... Setting up libxml-sax-perl (1.02+dfsg-4) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up appstream (1.0.5-1) ... ✔ Metadata cache was updated successfully. Setting up libmodule-runtime-perl (0.018-1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-5+b2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.60-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.28-2) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libwww-perl (6.78-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.19-1) ... Setting up lintian (2.122.0) ... Setting up sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.41-9) ... Processing triggers for man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: n/a Build-Time: 65 Distribution: unstable Foreign Architectures: armhf Host Architecture: armhf Install-Time: 16 Job: libseqlib_1.2.0+dfsg-11 Lintian: pass Machine Architecture: amd64 Package: libseqlib Package-Time: 92 Source-Version: 1.2.0+dfsg-11 Space: n/a Status: successful Version: 1.2.0+dfsg-11 -------------------------------------------------------------------------------- Finished at 2025-07-10T02:53:48Z Build needed 00:01:32, no disk space