sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | libseqlib 1.2.0+dfsg-6 (armhf) Thu, 30 Sep 2021 05:58:06 +0000 | +==============================================================================+ Package: libseqlib Version: 1.2.0+dfsg-6 Source Version: 1.2.0+dfsg-6 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-7c87000c-568d-43ac-ba8e-2f21fb8ad9f1' with '<>' I: NOTICE: Log filtering will replace 'build/libseqlib-5Lx8Cw/resolver-8162kW' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [165 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2021-09-30-0203.42-F-2021-09-29-0803.32.pdiff [101 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2021-09-30-0203.42-F-2021-09-29-0803.32.pdiff [101 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2021-09-30-0203.42-F-2021-09-29-0803.32.pdiff [124 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2021-09-30-0203.42-F-2021-09-29-0803.32.pdiff [124 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main armhf Packages [8476 kB] Fetched 8994 kB in 4s (2435 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'libseqlib' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libseqlib.git Please use: git clone https://salsa.debian.org/med-team/libseqlib.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 167 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main libseqlib 1.2.0+dfsg-6 (dsc) [2246 B] Get:2 http://debian.oregonstate.edu/debian unstable/main libseqlib 1.2.0+dfsg-6 (tar) [149 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main libseqlib 1.2.0+dfsg-6 (diff) [15.3 kB] Fetched 167 kB in 0s (12.6 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/libseqlib-5Lx8Cw/libseqlib-1.2.0+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/libseqlib-5Lx8Cw' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, pkg-kde-tools, libhts-dev, libcurl4-gnutls-dev | libcurl4-dev, zlib1g-dev, libfml-dev (>= 0.1+git20190320.b499514), libbwa-dev (>= 0.7.15-3), libjsoncpp-dev, libssw-dev, libbz2-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf Filtered Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, pkg-kde-tools, libhts-dev, libcurl4-gnutls-dev, zlib1g-dev, libfml-dev (>= 0.1+git20190320.b499514), libbwa-dev (>= 0.7.15-3), libjsoncpp-dev, libssw-dev, libbz2-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [501 B] Get:5 copy:/<>/apt_archive ./ Packages [588 B] Fetched 2046 B in 0s (82.7 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils build-essential cpp-10-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-10-arm-linux-gnueabihf gcc-10-arm-linux-gnueabihf-base gcc-10-cross-base gcc-11-base:armhf gcc-11-cross-base gcc-9-base:armhf gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libasan6-armhf-cross libatomic1:armhf libatomic1-armhf-cross libbrotli1:armhf libbwa-dev:armhf libbz2-1.0:armhf libbz2-dev:armhf libc6:armhf libc6-armhf-cross libc6-dev libc6-dev:armhf libc6-dev-armhf-cross libcom-err2:armhf libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:armhf libcrypt1:armhf libcurl3-gnutls:armhf libcurl4-gnutls-dev:armhf libdb5.3:armhf libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:armhf libdeflate0:armhf libdpkg-perl libelf1 libexpat1 libffi8:armhf libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfml-dev:armhf libfml0:armhf libgcc-10-dev-armhf-cross libgcc-9-dev:armhf libgcc-s1:armhf libgcc-s1-armhf-cross libglib2.0-0 libgmp10:armhf libgnutls30:armhf libgomp1:armhf libgomp1-armhf-cross libgssapi-krb5-2:armhf libhogweed6:armhf libhts-dev:armhf libhts3:armhf libhtscodecs2:armhf libicu67 libidn2-0:armhf libio-string-perl libjsoncpp-dev:armhf libjsoncpp24:armhf libk5crypto3:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5support0:armhf libldap-2.4-2:armhf liblocale-gettext-perl liblzma-dev:armhf liblzma5:armhf libmagic-mgc libmagic1 libmpdec3 libnettle8:armhf libnghttp2-14:armhf libnsl-dev libnsl-dev:armhf libnsl2:armhf libp11-kit0:armhf libperl5.32 libpipeline1 libpsl5:armhf libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib librtmp1:armhf libsasl2-2:armhf libsasl2-modules-db:armhf libsigsegv2 libsqlite3-0 libssh2-1:armhf libssl1.1:armhf libssw-dev:armhf libssw0:armhf libstdc++-10-dev libstdc++-10-dev-armhf-cross libstdc++-9-dev:armhf libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtasn1-6:armhf libtirpc-dev libtirpc-dev:armhf libtirpc3:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libunistring2:armhf libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db media-types perl perl-modules-5.32 pkg-config pkg-kde-tools po-debconf python3 python3-minimal python3.9 python3.9-minimal rpcsvc-proto sensible-utils ucf zlib1g:armhf zlib1g-dev:armhf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-10-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-10-multilib gcc-10-doc manpages-dev flex bison gdb-arm-linux-gnueabihf gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff samtools:armhf glibc-doc:armhf libc-l10n:armhf locales:armhf libnss-nis:armhf libnss-nisplus:armhf glibc-doc manpages-dev:armhf libcurl4-doc:armhf libgnutls28-dev:armhf libidn11-dev:armhf libkrb5-dev:armhf libldap2-dev:armhf librtmp-dev:armhf libssh2-1-dev:armhf gnupg git bzr gnutls-bin:armhf krb5-doc:armhf krb5-user:armhf liblzma-doc:armhf libstdc++-10-doc libstdc++-9-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl cdbs libmail-box-perl python3-doc python3-tk python3-venv python3.9-venv python3.9-doc binfmt-support Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx bzip2-doc:armhf ca-certificates:armhf libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales:armhf libldap-common:armhf publicsuffix:armhf ca-certificates libsasl2-modules:armhf libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils build-essential cpp-10-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-10-arm-linux-gnueabihf gcc-10-arm-linux-gnueabihf-base gcc-10-cross-base gcc-11-base:armhf gcc-11-cross-base gcc-9-base:armhf gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libasan6-armhf-cross libatomic1:armhf libatomic1-armhf-cross libbrotli1:armhf libbwa-dev:armhf libbz2-1.0:armhf libbz2-dev:armhf libc6:armhf libc6-armhf-cross libc6-dev libc6-dev:armhf libc6-dev-armhf-cross libcom-err2:armhf libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:armhf libcrypt1:armhf libcurl3-gnutls:armhf libcurl4-gnutls-dev:armhf libdb5.3:armhf libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:armhf libdeflate0:armhf libdpkg-perl libelf1 libexpat1 libffi8:armhf libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfml-dev:armhf libfml0:armhf libgcc-10-dev-armhf-cross libgcc-9-dev:armhf libgcc-s1:armhf libgcc-s1-armhf-cross libglib2.0-0 libgmp10:armhf libgnutls30:armhf libgomp1:armhf libgomp1-armhf-cross libgssapi-krb5-2:armhf libhogweed6:armhf libhts-dev:armhf libhts3:armhf libhtscodecs2:armhf libicu67 libidn2-0:armhf libio-string-perl libjsoncpp-dev:armhf libjsoncpp24:armhf libk5crypto3:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5support0:armhf libldap-2.4-2:armhf liblocale-gettext-perl liblzma-dev:armhf liblzma5:armhf libmagic-mgc libmagic1 libmpdec3 libnettle8:armhf libnghttp2-14:armhf libnsl-dev libnsl-dev:armhf libnsl2:armhf libp11-kit0:armhf libperl5.32 libpipeline1 libpsl5:armhf libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib librtmp1:armhf libsasl2-2:armhf libsasl2-modules-db:armhf libsigsegv2 libsqlite3-0 libssh2-1:armhf libssl1.1:armhf libssw-dev:armhf libssw0:armhf libstdc++-10-dev libstdc++-10-dev-armhf-cross libstdc++-9-dev:armhf libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtasn1-6:armhf libtirpc-dev libtirpc-dev:armhf libtirpc3:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libunistring2:armhf libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db media-types perl perl-modules-5.32 pkg-config pkg-kde-tools po-debconf python3 python3-minimal python3.9 python3.9-minimal rpcsvc-proto sbuild-build-depends-main-dummy:armhf sensible-utils ucf zlib1g:armhf zlib1g-dev:armhf 0 upgraded, 163 newly installed, 0 to remove and 0 not upgraded. Need to get 233 MB of archives. After this operation, 962 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1012 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.37.2-3 [143 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-7 [935 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.32 all 5.32.1-6 [2824 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.32 amd64 5.32.1-6 [4106 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.32.1-6 [293 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4+b1 [19.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.9-minimal amd64 3.9.7-4 [804 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.4.1-2+b1 [104 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 python3.9-minimal amd64 3.9.7-4 [1963 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 python3-minimal amd64 3.9.2-3 [38.2 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 media-types all 4.0.0 [30.3 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libmpdec3 amd64 2.5.1-2 [87.8 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.36.0-2 [815 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.9-stdlib amd64 3.9.7-4 [1688 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 python3.9 amd64 3.9.7-4 [480 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3-stdlib amd64 3.9.2-3 [21.4 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 python3 amd64 3.9.2-3 [37.9 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main armhf gcc-11-base armhf 11.2.0-8 [205 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main armhf gcc-9-base armhf 9.4.0-3 [200 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.39-3 [69.1 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.21-4 [175 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-5 [204 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.71-2 [343 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.4-2 [819 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.21-4 [510 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabihf amd64 2.37-7 [2865 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.25-2 [104 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.3.2-2 [190 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 rpcsvc-proto amd64 1.4.2-4 [63.1 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.32-4 [2251 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev amd64 10.3.0-11 [1750 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10 amd64 10.3.0-11 [9434 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:10.2.1-1 [1644 B] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.9 [1537 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.9 [2153 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.9 [7704 B] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-arm-linux-gnueabihf-base amd64 10.3.0-8cross1 [205 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-10-arm-linux-gnueabihf amd64 10.3.0-8cross1 [44.1 MB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabihf amd64 4:10.2.1-1 [16.8 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.18+nmu2 [31.7 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10.3.0-8cross1 [200 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-cross-base all 11.2.0-5cross1 [201 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armhf-cross all 2.32-1cross4 [1100 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-armhf-cross all 11.2.0-5cross1 [36.4 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armhf-cross all 11.2.0-5cross1 [86.6 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armhf-cross all 11.2.0-5cross1 [6660 B] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-armhf-cross all 11.2.0-5cross1 [1964 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armhf-cross all 11.2.0-5cross1 [438 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armhf-cross all 11.2.0-5cross1 [796 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-10-dev-armhf-cross all 10.3.0-8cross1 [690 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-arm-linux-gnueabihf amd64 10.3.0-8cross1 [50.4 MB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabihf amd64 4:10.2.1-1 [1468 B] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armhf-cross all 5.10.46-4cross4 [1436 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armhf-cross all 2.32-1cross4 [1762 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev-armhf-cross all 10.3.0-8cross1 [1764 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10-arm-linux-gnueabihf amd64 10.3.0-8cross1 [47.2 MB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabihf amd64 4:10.2.1-1 [1184 B] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.12+dfsg-5 [696 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2+b1 [337 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1.1 [19.0 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu2 [30.6 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.18+nmu2 [40.9 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armhf all 12.9 [6708 B] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 d-shlibs all 0.100 [18.1 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.5.2 [192 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-15 [513 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.185-2 [172 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.21-4 [1311 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.5.2 [1056 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-s1 armhf 11.2.0-8 [36.3 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main armhf libc6 armhf 2.32-4 [2340 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main armhf libasan5 armhf 9.4.0-3 [2778 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main armhf libatomic1 armhf 11.2.0-8 [6908 B] Get:103 http://debian.oregonstate.edu/debian unstable/main armhf libbrotli1 armhf 1.0.9-2+b2 [262 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main armhf libbwa-dev armhf 0.7.17-6+b1 [138 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main armhf libbz2-1.0 armhf 1.0.8-4 [44.6 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main armhf linux-libc-dev armhf 5.14.6-3 [1385 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main armhf libcrypt1 armhf 1:4.4.25-2 [96.8 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main armhf libcrypt-dev armhf 1:4.4.25-2 [112 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main armhf libcom-err2 armhf 1.46.4-1 [74.4 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main armhf libkrb5support0 armhf 1.18.3-7 [62.5 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main armhf libk5crypto3 armhf 1.18.3-7 [110 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main armhf libkeyutils1 armhf 1.6.1-2 [14.4 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main armhf libssl1.1 armhf 1.1.1l-1 [1311 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main armhf libkrb5-3 armhf 1.18.3-7 [319 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main armhf libgssapi-krb5-2 armhf 1.18.3-7 [143 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main armhf libtirpc3 armhf 1.3.2-2 [72.7 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main armhf libnsl2 armhf 1.3.0-2 [33.9 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main armhf libtirpc-dev armhf 1.3.2-2 [182 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main armhf libnsl-dev armhf 1.3.0-2 [62.1 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main armhf libc6-dev armhf 2.32-4 [1793 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main armhf libbz2-dev armhf 1.0.8-4 [29.2 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main armhf libgmp10 armhf 2:6.2.1+dfsg-2 [513 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main armhf libnettle8 armhf 3.7.3-1 [284 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main armhf libhogweed6 armhf 3.7.3-1 [308 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main armhf libunistring2 armhf 0.9.10-6 [374 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main armhf libidn2-0 armhf 2.3.2-2 [92.9 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main armhf libffi8 armhf 3.4.2-2 [21.4 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main armhf libp11-kit0 armhf 0.24.0-2+b1 [325 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main armhf libtasn1-6 armhf 4.17.0-2 [50.7 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main armhf libgnutls30 armhf 3.7.2-2 [1292 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main armhf libdb5.3 armhf 5.3.28+dfsg1-0.8 [596 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main armhf libsasl2-modules-db armhf 2.1.27+dfsg-2.1 [67.6 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main armhf libsasl2-2 armhf 2.1.27+dfsg-2.1 [99.1 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main armhf libldap-2.4-2 armhf 2.4.59+dfsg-1 [211 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main armhf libnghttp2-14 armhf 1.43.0-1 [65.6 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main armhf libpsl5 armhf 0.21.0-1.2 [56.1 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main armhf zlib1g armhf 1:1.2.11.dfsg-2 [85.4 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [55.2 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main armhf libssh2-1 armhf 1.10.0-2 [163 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main armhf libcurl3-gnutls armhf 7.74.0-1.3+b1 [306 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main armhf libcurl4-gnutls-dev armhf 7.74.0-1.3+b1 [402 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main armhf libdeflate0 armhf 1.7-2 [43.3 kB] Get:143 http://debian.oregonstate.edu/debian unstable/main armhf libdeflate-dev armhf 1.7-2 [39.9 kB] Get:144 http://debian.oregonstate.edu/debian unstable/main armhf libfml0 armhf 0.1+git20190320.b499514-1+b1 [70.8 kB] Get:145 http://debian.oregonstate.edu/debian unstable/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [185 kB] Get:146 http://debian.oregonstate.edu/debian unstable/main armhf libfml-dev armhf 0.1+git20190320.b499514-1+b1 [82.4 kB] Get:147 http://debian.oregonstate.edu/debian unstable/main armhf libgomp1 armhf 11.2.0-8 [88.7 kB] Get:148 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++6 armhf 11.2.0-8 [479 kB] Get:149 http://debian.oregonstate.edu/debian unstable/main armhf libubsan1 armhf 11.2.0-8 [798 kB] Get:150 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-9-dev armhf 9.4.0-3 [658 kB] Get:151 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.70.0-1+b1 [1402 kB] Get:152 http://debian.oregonstate.edu/debian unstable/main armhf libhtscodecs2 armhf 1.1.1-3+b1 [50.0 kB] Get:153 http://debian.oregonstate.edu/debian unstable/main armhf liblzma5 armhf 5.2.5-2 [159 kB] Get:154 http://debian.oregonstate.edu/debian unstable/main armhf libhts3 armhf 1.13+ds-2 [348 kB] Get:155 http://debian.oregonstate.edu/debian unstable/main armhf liblzma-dev armhf 5.2.5-2 [220 kB] Get:156 http://debian.oregonstate.edu/debian unstable/main armhf libhts-dev armhf 1.13+ds-2 [4050 kB] Get:157 http://debian.oregonstate.edu/debian unstable/main armhf libjsoncpp24 armhf 1.9.4-5 [68.7 kB] Get:158 http://debian.oregonstate.edu/debian unstable/main armhf libjsoncpp-dev armhf 1.9.4-5 [25.7 kB] Get:159 http://debian.oregonstate.edu/debian unstable/main armhf libssw0 armhf 1.1-13 [21.2 kB] Get:160 http://debian.oregonstate.edu/debian unstable/main armhf libssw-dev armhf 1.1-13 [24.3 kB] Get:161 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++-9-dev armhf 9.4.0-3 [1773 kB] Get:162 http://debian.oregonstate.edu/debian unstable/main amd64 pkg-config amd64 0.29.2-1 [65.1 kB] Get:163 http://debian.oregonstate.edu/debian unstable/main amd64 pkg-kde-tools all 0.15.32 [96.7 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 233 MB in 2s (127 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10536 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.37.2-3_amd64.deb ... Unpacking bsdextrautils (2.37.2-3) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../01-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-7_amd64.deb ... Unpacking groff-base (1.22.4-7) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../03-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_amd64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package perl-modules-5.32. Preparing to unpack .../05-perl-modules-5.32_5.32.1-6_all.deb ... Unpacking perl-modules-5.32 (5.32.1-6) ... 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Unpacking python3.9-minimal (3.9.7-4) ... Setting up libpython3.9-minimal:amd64 (3.9.7-4) ... Setting up libexpat1:amd64 (2.4.1-2+b1) ... Setting up python3.9-minimal (3.9.7-4) ... Selecting previously unselected package python3-minimal. (Reading database ... 13376 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.9.2-3_amd64.deb ... Unpacking python3-minimal (3.9.2-3) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_4.0.0_all.deb ... Unpacking media-types (4.0.0) ... Selecting previously unselected package libmpdec3:amd64. Preparing to unpack .../2-libmpdec3_2.5.1-2_amd64.deb ... Unpacking libmpdec3:amd64 (2.5.1-2) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../3-libsqlite3-0_3.36.0-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.36.0-2) ... Selecting previously unselected package libpython3.9-stdlib:amd64. 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Unpacking gcc-9-base:armhf (9.4.0-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../003-sensible-utils_0.0.17_all.deb ... Unpacking sensible-utils (0.0.17) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.39-3_amd64.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../005-libmagic1_1%3a5.39-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../006-file_1%3a5.39-3_amd64.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../007-gettext-base_0.21-4_amd64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package ucf. Preparing to unpack .../008-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../009-libsigsegv2_2.13-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../010-m4_1.4.18-5_amd64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../011-autoconf_2.71-2_all.deb ... Unpacking autoconf (2.71-2) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../012-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../013-automake_1%3a1.16.4-2_all.deb ... Unpacking automake (1:1.16.4-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../014-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package binutils-arm-linux-gnueabihf. 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Selecting previously unselected package libstdc++-10-dev:amd64. Preparing to unpack .../021-libstdc++-10-dev_10.3.0-11_amd64.deb ... Unpacking libstdc++-10-dev:amd64 (10.3.0-11) ... Selecting previously unselected package g++-10. Preparing to unpack .../022-g++-10_10.3.0-11_amd64.deb ... Unpacking g++-10 (10.3.0-11) ... Selecting previously unselected package g++. Preparing to unpack .../023-g++_4%3a10.2.1-1_amd64.deb ... Unpacking g++ (4:10.2.1-1) ... Selecting previously unselected package libdpkg-perl. Preparing to unpack .../024-libdpkg-perl_1.20.9_all.deb ... Unpacking libdpkg-perl (1.20.9) ... Selecting previously unselected package dpkg-dev. Preparing to unpack .../025-dpkg-dev_1.20.9_all.deb ... Unpacking dpkg-dev (1.20.9) ... Selecting previously unselected package build-essential. Preparing to unpack .../026-build-essential_12.9_amd64.deb ... Unpacking build-essential (12.9) ... Selecting previously unselected package gcc-10-arm-linux-gnueabihf-base:amd64. Preparing to unpack .../027-gcc-10-arm-linux-gnueabihf-base_10.3.0-8cross1_amd64.deb ... Unpacking gcc-10-arm-linux-gnueabihf-base:amd64 (10.3.0-8cross1) ... Selecting previously unselected package cpp-10-arm-linux-gnueabihf. Preparing to unpack .../028-cpp-10-arm-linux-gnueabihf_10.3.0-8cross1_amd64.deb ... Unpacking cpp-10-arm-linux-gnueabihf (10.3.0-8cross1) ... Selecting previously unselected package cpp-arm-linux-gnueabihf. Preparing to unpack .../029-cpp-arm-linux-gnueabihf_4%3a10.2.1-1_amd64.deb ... Unpacking cpp-arm-linux-gnueabihf (4:10.2.1-1) ... Selecting previously unselected package cross-config. Preparing to unpack .../030-cross-config_2.6.18+nmu2_all.deb ... Unpacking cross-config (2.6.18+nmu2) ... Selecting previously unselected package gcc-10-cross-base. Preparing to unpack .../031-gcc-10-cross-base_10.3.0-8cross1_all.deb ... Unpacking gcc-10-cross-base (10.3.0-8cross1) ... Selecting previously unselected package gcc-11-cross-base. Preparing to unpack .../032-gcc-11-cross-base_11.2.0-5cross1_all.deb ... Unpacking gcc-11-cross-base (11.2.0-5cross1) ... Selecting previously unselected package libc6-armhf-cross. Preparing to unpack .../033-libc6-armhf-cross_2.32-1cross4_all.deb ... Unpacking libc6-armhf-cross (2.32-1cross4) ... Selecting previously unselected package libgcc-s1-armhf-cross. Preparing to unpack .../034-libgcc-s1-armhf-cross_11.2.0-5cross1_all.deb ... Unpacking libgcc-s1-armhf-cross (11.2.0-5cross1) ... Selecting previously unselected package libgomp1-armhf-cross. Preparing to unpack .../035-libgomp1-armhf-cross_11.2.0-5cross1_all.deb ... Unpacking libgomp1-armhf-cross (11.2.0-5cross1) ... Selecting previously unselected package libatomic1-armhf-cross. Preparing to unpack .../036-libatomic1-armhf-cross_11.2.0-5cross1_all.deb ... Unpacking libatomic1-armhf-cross (11.2.0-5cross1) ... Selecting previously unselected package libasan6-armhf-cross. 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Setting up libc6-armhf-cross (2.32-1cross4) ... Setting up bsdextrautils (2.37.2-3) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-7) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libglib2.0-0:amd64 (2.70.0-1+b1) ... No schema files found: doing nothing. Setting up perl-modules-5.32 (5.32.1-6) ... Setting up libsqlite3-0:amd64 (3.36.0-2) ... Setting up libmagic1:amd64 (1:5.39-3) ... Setting up linux-libc-dev:armhf (5.14.6-3) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up cross-config (2.6.18+nmu2) ... Setting up libtirpc-dev:amd64 (1.3.2-2) ... Setting up rpcsvc-proto (1.4.2-4) ... Setting up libsigsegv2:amd64 (2.13-1) ... Setting up linux-libc-dev-armhf-cross (5.10.46-4cross4) ... Setting up autopoint (0.21-4) ... Setting up d-shlibs (0.100) ... Setting up libperl5.32:amd64 (5.32.1-6) ... 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Setting up automake (1:1.16.4-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up gcc-10-arm-linux-gnueabihf (10.3.0-8cross1) ... Setting up libstdc++-10-dev-armhf-cross (10.3.0-8cross1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.5.2) ... Setting up libxml-namespacesupport-perl (1.12-1.1) ... Setting up python3 (3.9.2-3) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.20.9) ... Setting up g++-10-arm-linux-gnueabihf (10.3.0-8cross1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up dh-autoreconf (20) ... Setting up libxml-sax-base-perl (1.09-1.1) ... Setting up libio-string-perl (1.08-3.1) ... Setting up pkg-config (0.29.2-1) ... Setting up pkg-kde-tools (0.15.32) ... Setting up build-essential (12.9) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up gcc-arm-linux-gnueabihf (4:10.2.1-1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up g++-arm-linux-gnueabihf (4:10.2.1-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0134+dfsg-2+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.12.0-1) ... 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Setting up libjsoncpp-dev:armhf (1.9.4-5) ... Setting up libpsl5:armhf (0.21.0-1.2) ... Setting up libhogweed6:armhf (3.7.3-1) ... Setting up libssw-dev:armhf (1.1-13) ... Setting up libgcc-9-dev:armhf (9.4.0-3) ... Setting up libgnutls30:armhf (3.7.2-2) ... Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libgssapi-krb5-2:armhf (1.18.3-7) ... Setting up libtirpc3:armhf (1.3.2-2) ... Setting up libldap-2.4-2:armhf (2.4.59+dfsg-1) ... Setting up libcurl3-gnutls:armhf (7.74.0-1.3+b1) ... Setting up libcurl4-gnutls-dev:armhf (7.74.0-1.3+b1) ... Setting up libtirpc-dev:armhf (1.3.2-2) ... Setting up libnsl2:armhf (1.3.0-2) ... Setting up libhts3:armhf (1.13+ds-2) ... Setting up libnsl-dev:armhf (1.3.0-2) ... Setting up libc6-dev:armhf (2.32-4) ... Setting up libbz2-dev:armhf (1.0.8-4) ... Setting up libstdc++-9-dev:armhf (9.4.0-3) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ... Setting up libfml-dev:armhf (0.1+git20190320.b499514-1+b1) ... 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Processing triggers for libc-bin (2.32-4) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-17-amd64 #1 SMP Debian 4.19.194-3 (2021-07-18) amd64 (x86_64) Toolchain package versions: binutils_2.37-7 dpkg-dev_1.20.9 g++-10_10.3.0-11 gcc-10_10.3.0-11 libc6-dev_2.32-4 libstdc++-10-dev_10.3.0-11 libstdc++-10-dev-armhf-cross_10.3.0-8cross1 libstdc++-9-dev_9.4.0-3 libstdc++6_11.2.0-8 libstdc++6-armhf-cross_11.2.0-5cross1 linux-libc-dev_5.14.6-3 Package versions: adduser_3.118 apt_2.3.9 autoconf_2.71-2 automake_1:1.16.4-2 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_12 base-passwd_3.5.52 bash_5.1-3+b1 binutils_2.37-7 binutils-arm-linux-gnueabihf_2.37-7 binutils-common_2.37-7 binutils-x86-64-linux-gnu_2.37-7 bsdextrautils_2.37.2-3 bsdutils_1:2.37.2-3 build-essential_12.9 bzip2_1.0.8-4 coreutils_8.32-4+b1 cpp_4:10.2.1-1 cpp-10_10.3.0-11 cpp-10-arm-linux-gnueabihf_10.3.0-8cross1 cpp-8_8.4.0-7 cpp-arm-linux-gnueabihf_4:10.2.1-1 cross-config_2.6.18+nmu2 crossbuild-essential-armhf_12.9 d-shlibs_0.100 dash_0.5.11+git20210120+802ebd4-1 debconf_1.5.77 debhelper_13.5.2 debian-archive-keyring_2021.1.1 debianutils_5.5-1 dh-autoreconf_20 dh-strip-nondeterminism_1.12.0-1 diffutils_1:3.7-5 dpkg_1.20.9 dpkg-cross_2.6.18+nmu2 dpkg-dev_1.20.9 dwz_0.14-1 e2fsprogs_1.46.4-1 fakeroot_1.26-1 fdisk_2.37.2-3 file_1:5.39-3 findutils_4.8.0-1 g++_4:10.2.1-1 g++-10_10.3.0-11 g++-10-arm-linux-gnueabihf_10.3.0-8cross1 g++-arm-linux-gnueabihf_4:10.2.1-1 gcc_4:10.2.1-1 gcc-10_10.3.0-11 gcc-10-arm-linux-gnueabihf_10.3.0-8cross1 gcc-10-arm-linux-gnueabihf-base_10.3.0-8cross1 gcc-10-base_10.3.0-11 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libxml-namespacesupport-perl_1.12-1.1 libxml-sax-base-perl_1.09-1.1 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-1 libxml2_2.9.12+dfsg-5 libxxhash0_0.8.0-2 libyaml-perl_1.30-1 libzstd1_1.4.8+dfsg-2.1 linux-libc-dev_5.14.6-3 linux-libc-dev-armhf-cross_5.10.46-4cross4 login_1:4.8.1-1 logsave_1.46.4-1 lsb-base_11.1.0 m4_1.4.18-5 make_4.3-4.1 man-db_2.9.4-2 mawk_1.3.4.20200120-2 media-types_4.0.0 mount_2.37.2-3 ncurses-base_6.2+20210905-1 ncurses-bin_6.2+20210905-1 passwd_1:4.8.1-1 patch_2.7.6-7 perl_5.32.1-6 perl-base_5.32.1-6 perl-modules-5.28_5.28.1-6 perl-modules-5.32_5.32.1-6 pkg-config_0.29.2-1 pkg-kde-tools_0.15.32 po-debconf_1.0.21+nmu1 python3_3.9.2-3 python3-minimal_3.9.2-3 python3.9_3.9.7-4 python3.9-minimal_3.9.7-4 readline-common_8.1-2 rpcsvc-proto_1.4.2-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.00-1 tar_1.34+dfsg-1 tzdata_2021b-1 ucf_3.0043 util-linux_2.37.2-3 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: libseqlib Binary: libseqlib2, libseqlib-dev Architecture: any Version: 1.2.0+dfsg-6 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/walaj/SeqLib Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/libseqlib Vcs-Git: https://salsa.debian.org/med-team/libseqlib.git Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, pkg-kde-tools, libhts-dev, libcurl4-gnutls-dev | libcurl4-dev, zlib1g-dev, libfml-dev (>= 0.1+git20190320.b499514), libbwa-dev (>= 0.7.15-3), libjsoncpp-dev, libssw-dev, libbz2-dev Package-List: libseqlib-dev deb libdevel optional arch=any libseqlib2 deb libs optional arch=any Checksums-Sha1: 584cb70cc2d11d595f26ec50763d11ca570395c5 148996 libseqlib_1.2.0+dfsg.orig.tar.xz ebb32f2af86949cef8f081917a505158e9990fd6 15324 libseqlib_1.2.0+dfsg-6.debian.tar.xz Checksums-Sha256: 408ee92e5041ff45d9d259d1507ef783e74c565d02e0c623ef0a67a7c387b953 148996 libseqlib_1.2.0+dfsg.orig.tar.xz b85b81955dd25f6870b700f197daae1d16db9f414b8ffcf43c630043188e6af7 15324 libseqlib_1.2.0+dfsg-6.debian.tar.xz Files: 8d8f26bf4fd751789bbc53bd7319355a 148996 libseqlib_1.2.0+dfsg.orig.tar.xz 33d7ae6a4b8068430e0f86858e19ab40 15324 libseqlib_1.2.0+dfsg-6.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmEuihoRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGnrA//T4GQNVOAGGqqwhBFhFy7iI1ZQaD/ysyL PwluRkZW+Tbko72omnbAhoqhx7S5f+TNCpx3Tv8dh1b1fe4vExgL6hnHgRT21we1 LH2NEjjrs4BuMGl2XW6jT0q0cHeeSI7L86SWh/CLAxTNV8x1Q5q6WaTnKVrlUnGl d/eSA6aook0tZmvJjJjcxNs75E2Q/ffSV7JwDGQAUNJy+tQ/7KE0PeTgVyhx55pu 91x9HHLSxbkEstpqUNU4veWZArifiFePD3rfiMF1nYG0U7lntE6jWyzG66s7YjGW 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libseqlib_1.2.0+dfsg-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_libs.patch dpkg-source: info: applying adapt_to_debian_fermi-lite.patch dpkg-source: info: applying fix_fermi-lite_usage.patch dpkg-source: info: applying fix_htslib_usage.patch dpkg-source: info: applying fml_include_path.patch dpkg-source: info: applying dynamic_lib.patch dpkg-source: info: applying use_debian_packaged_jsoncpp.patch dpkg-source: info: applying use_debian_packaged_ssw.patch dpkg-source: info: applying pkg-config.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-7c87000c-568d-43ac-ba8e-2f21fb8ad9f1 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarmhf -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package libseqlib dpkg-buildpackage: info: source version 1.2.0+dfsg-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --with pkgkde_symbolshelper dh_clean debian/rules binary-arch dh binary-arch --with pkgkde_symbolshelper dh_update_autotools_config -a dh_autoreconf -a libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac, libtoolize: and rerunning libtoolize and aclocal. libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am. libtoolize: 'AC_PROG_RANLIB' is rendered obsolete by 'LT_INIT' configure.ac:6: warning: The macro `AC_CONFIG_HEADER' is obsolete. configure.ac:6: You should run autoupdate. ./lib/autoconf/status.m4:719: AC_CONFIG_HEADER is expanded from... configure.ac:6: the top level configure.ac:19: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:19: You should run autoupdate. aclocal.m4:121: AC_PROG_LIBTOOL is expanded from... configure.ac:19: the top level configure.ac:17: installing './compile' configure.ac:19: installing './config.guess' configure.ac:19: installing './config.sub' configure.ac:4: installing './install-sh' configure.ac:4: installing './missing' src/Makefile.am: installing './depcomp' dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=arm-linux-gnueabihf configure: loading site script /etc/dpkg-cross/cross-config.armhf checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for arm-linux-gnueabihf-strip... arm-linux-gnueabihf-strip checking for a race-free mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for arm-linux-gnueabihf-g++... arm-linux-gnueabihf-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether arm-linux-gnueabihf-g++ accepts -g... yes checking for arm-linux-gnueabihf-g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of arm-linux-gnueabihf-g++... none checking for arm-linux-gnueabihf-gcc... arm-linux-gnueabihf-gcc checking whether the compiler supports GNU C... yes checking whether arm-linux-gnueabihf-gcc accepts -g... yes checking for arm-linux-gnueabihf-gcc option to enable C11 features... none needed checking whether arm-linux-gnueabihf-gcc understands -c and -o together... yes checking dependency style of arm-linux-gnueabihf-gcc... none checking for arm-linux-gnueabihf-ranlib... arm-linux-gnueabihf-ranlib checking build system type... x86_64-pc-linux-gnu checking host system type... arm-unknown-linux-gnueabihf checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by arm-linux-gnueabihf-gcc... /usr/arm-linux-gnueabihf/bin/ld checking if the linker (/usr/arm-linux-gnueabihf/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/arm-linux-gnueabihf-nm -B checking the name lister (/usr/bin/arm-linux-gnueabihf-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/arm-linux-gnueabihf/bin/ld option to reload object files... -r checking for arm-linux-gnueabihf-objdump... arm-linux-gnueabihf-objdump checking how to recognize dependent libraries... pass_all checking for arm-linux-gnueabihf-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for arm-linux-gnueabihf-ar... arm-linux-gnueabihf-ar checking for archiver @FILE support... @ checking for arm-linux-gnueabihf-strip... (cached) arm-linux-gnueabihf-strip checking for arm-linux-gnueabihf-ranlib... (cached) arm-linux-gnueabihf-ranlib checking command to parse /usr/bin/arm-linux-gnueabihf-nm -B output from arm-linux-gnueabihf-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for arm-linux-gnueabihf-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if arm-linux-gnueabihf-gcc supports -fno-rtti -fno-exceptions... no checking for arm-linux-gnueabihf-gcc option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabihf-gcc PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabihf-gcc static flag -static works... yes checking if arm-linux-gnueabihf-gcc supports -c -o file.o... yes checking if arm-linux-gnueabihf-gcc supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabihf-gcc linker (/usr/arm-linux-gnueabihf/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... arm-linux-gnueabihf-g++ -E checking for ld used by arm-linux-gnueabihf-g++... /usr/arm-linux-gnueabihf/bin/ld checking if the linker (/usr/arm-linux-gnueabihf/bin/ld) is GNU ld... yes checking whether the arm-linux-gnueabihf-g++ linker (/usr/arm-linux-gnueabihf/bin/ld) supports shared libraries... yes checking for arm-linux-gnueabihf-g++ option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabihf-g++ PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabihf-g++ static flag -static works... yes checking if arm-linux-gnueabihf-g++ supports -c -o file.o... yes checking if arm-linux-gnueabihf-g++ supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabihf-g++ linker (/usr/arm-linux-gnueabihf/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for zlib.h... yes checking for library containing gzopen... -lz checking for library containing lzma_code... -llzma checking for library containing BZ2_bzBuffToBuffDecompress... -lbz2 checking for library containing clock_gettime... none required checking for arm-linux-gnueabihf-pkg-config... /usr/bin/arm-linux-gnueabihf-pkg-config checking pkg-config is at least version 0.9.0... yes checking for htslib... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/seqtools/Makefile config.status: creating libseqlib.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in src make[3]: Entering directory '/<>/src' /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-FastqReader.lo `test -f 'FastqReader.cpp' || echo './'`FastqReader.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c FastqReader.cpp -fPIC -DPIC -o .libs/libseqlib_la-FastqReader.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c FastqReader.cpp -o libseqlib_la-FastqReader.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BFC.lo `test -f 'BFC.cpp' || echo './'`BFC.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BFC.cpp -fPIC -DPIC -o .libs/libseqlib_la-BFC.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BFC.cpp -o libseqlib_la-BFC.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-ReadFilter.lo `test -f 'ReadFilter.cpp' || echo './'`ReadFilter.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ReadFilter.cpp -fPIC -DPIC -o .libs/libseqlib_la-ReadFilter.o In file included from /usr/arm-linux-gnueabihf/include/c++/10/vector:72, from ../SeqLib/ReadFilter.h:7, from ReadFilter.cpp:1: /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const SeqLib::Filter::AbstractRule&}; _Tp = SeqLib::Filter::AbstractRule; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/10/vector:67, from ../SeqLib/ReadFilter.h:7, from ReadFilter.cpp:1: /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_vector.h: In member function ‘void SeqLib::Filter::ReadFilter::AddRule(const SeqLib::Filter::AbstractRule&)’: /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_vector.h: In member function ‘void SeqLib::Filter::ReadFilterCollection::CheckHasIncluder()’: /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_vector.h: In constructor ‘SeqLib::Filter::ReadFilterCollection::ReadFilterCollection(const string&, const SeqLib::BamHeader&)’: /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ReadFilter.cpp -o libseqlib_la-ReadFilter.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-SeqPlot.lo `test -f 'SeqPlot.cpp' || echo './'`SeqPlot.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c SeqPlot.cpp -fPIC -DPIC -o .libs/libseqlib_la-SeqPlot.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c SeqPlot.cpp -o libseqlib_la-SeqPlot.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-GenomicRegion.lo `test -f 'GenomicRegion.cpp' || echo './'`GenomicRegion.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c GenomicRegion.cpp -fPIC -DPIC -o .libs/libseqlib_la-GenomicRegion.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c GenomicRegion.cpp -o libseqlib_la-GenomicRegion.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-RefGenome.lo `test -f 'RefGenome.cpp' || echo './'`RefGenome.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c RefGenome.cpp -fPIC -DPIC -o .libs/libseqlib_la-RefGenome.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c RefGenome.cpp -o libseqlib_la-RefGenome.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BamWriter.lo `test -f 'BamWriter.cpp' || echo './'`BamWriter.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamWriter.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamWriter.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamWriter.cpp -o libseqlib_la-BamWriter.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BamReader.lo `test -f 'BamReader.cpp' || echo './'`BamReader.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamReader.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamReader.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamReader.cpp -o libseqlib_la-BamReader.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BWAWrapper.lo `test -f 'BWAWrapper.cpp' || echo './'`BWAWrapper.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BWAWrapper.cpp -fPIC -DPIC -o .libs/libseqlib_la-BWAWrapper.o In file included from /usr/arm-linux-gnueabihf/include/c++/10/vector:72, from ../SeqLib/BWAWrapper.h:5, from BWAWrapper.cpp:9: /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const mem_aln_t&}; _Tp = mem_aln_t; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/10/algorithm:62, from ../SeqLib/BWAWrapper.h:7, from BWAWrapper.cpp:9: /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 79 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b, | ^~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_comp_iter]’: /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:1824:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1824 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:1844:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1844 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:1844:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:61, from /usr/arm-linux-gnueabihf/include/c++/10/algorithm:62, from ../SeqLib/BWAWrapper.h:7, from BWAWrapper.cpp:9: /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = mem_aln_t; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/10/algorithm:62, from ../SeqLib/BWAWrapper.h:7, from BWAWrapper.cpp:9: /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:1667:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1667 | __heap_select(_RandomAccessIterator __first, | ^~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:1667:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:1667:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:1667:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:1950:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1950 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:1950:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:1950:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:1929:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1929 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1930 | __comp); | ~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:1929:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:1964:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1964 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:1942:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1942 | std::__heap_select(__first, __middle, __last, __comp); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/10/vector:67, from ../SeqLib/BWAWrapper.h:5, from BWAWrapper.cpp:9: /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_vector.h: In member function ‘void SeqLib::BWAWrapper::AlignSequence(const string&, const string&, SeqLib::BamRecordVector&, bool, double, int) const’: /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/10/algorithm:62, from ../SeqLib/BWAWrapper.h:7, from BWAWrapper.cpp:9: /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:1979:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1979 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1980 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1981 | __comp); | ~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:1891:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1891 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_algo.h:1896:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1896 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BWAWrapper.cpp -o libseqlib_la-BWAWrapper.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BamRecord.lo `test -f 'BamRecord.cpp' || echo './'`BamRecord.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamRecord.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamRecord.o In file included from /usr/arm-linux-gnueabihf/include/c++/10/vector:72, from ../SeqLib/BamRecord.h:6, from BamRecord.cpp:1: /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc: In member function ‘std::vector SeqLib::BamRecord::GetSmartDoubleTag(const string&) const’: /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamRecord.cpp -o libseqlib_la-BamRecord.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-FermiAssembler.lo `test -f 'FermiAssembler.cpp' || echo './'`FermiAssembler.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c FermiAssembler.cpp -fPIC -DPIC -o .libs/libseqlib_la-FermiAssembler.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c FermiAssembler.cpp -o libseqlib_la-FermiAssembler.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/arm-linux-gnueabihf-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BamHeader.lo `test -f 'BamHeader.cpp' || echo './'`BamHeader.cpp libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamHeader.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamHeader.o libtool: compile: arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamHeader.cpp -o libseqlib_la-BamHeader.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link arm-linux-gnueabihf-g++ -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 2:0 -lfml `/usr/bin/arm-linux-gnueabihf-pkg-config --libs htslib` `/usr/bin/arm-linux-gnueabihf-pkg-config --libs jsoncpp` -lssw -Wl,-z,relro -Wl,-z,now -o libseqlib.la -rpath /usr/lib/arm-linux-gnueabihf libseqlib_la-FastqReader.lo libseqlib_la-BFC.lo libseqlib_la-ReadFilter.lo libseqlib_la-SeqPlot.lo libseqlib_la-GenomicRegion.lo libseqlib_la-RefGenome.lo libseqlib_la-BamWriter.lo libseqlib_la-BamReader.lo libseqlib_la-BWAWrapper.lo libseqlib_la-BamRecord.lo libseqlib_la-FermiAssembler.lo libseqlib_la-BamHeader.lo -lbz2 -llzma -lz -pthread libtool: link: arm-linux-gnueabihf-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc-cross/arm-linux-gnueabihf/10/../../../../arm-linux-gnueabihf/lib/crti.o /usr/lib/gcc-cross/arm-linux-gnueabihf/10/crtbeginS.o .libs/libseqlib_la-FastqReader.o .libs/libseqlib_la-BFC.o .libs/libseqlib_la-ReadFilter.o .libs/libseqlib_la-SeqPlot.o .libs/libseqlib_la-GenomicRegion.o .libs/libseqlib_la-RefGenome.o .libs/libseqlib_la-BamWriter.o .libs/libseqlib_la-BamReader.o .libs/libseqlib_la-BWAWrapper.o .libs/libseqlib_la-BamRecord.o .libs/libseqlib_la-FermiAssembler.o .libs/libseqlib_la-BamHeader.o -lfml -L/usr/lib/arm-linux-gnueabihf -lhts -ljsoncpp -lssw -lbz2 -llzma -lz -L/usr/lib/gcc-cross/arm-linux-gnueabihf/10 -L/usr/lib/gcc-cross/arm-linux-gnueabihf/10/../../../../arm-linux-gnueabihf/lib -L/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc-cross/arm-linux-gnueabihf/10/crtendS.o /usr/lib/gcc-cross/arm-linux-gnueabihf/10/../../../../arm-linux-gnueabihf/lib/crtn.o -g -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -pthread -pthread -Wl,-soname -Wl,libseqlib.so.2 -o .libs/libseqlib.so.2.0.0 libtool: link: (cd ".libs" && rm -f "libseqlib.so.2" && ln -s "libseqlib.so.2.0.0" "libseqlib.so.2") libtool: link: (cd ".libs" && rm -f "libseqlib.so" && ln -s "libseqlib.so.2.0.0" "libseqlib.so") libtool: link: arm-linux-gnueabihf-ar cr .libs/libseqlib.a libseqlib_la-FastqReader.o libseqlib_la-BFC.o libseqlib_la-ReadFilter.o libseqlib_la-SeqPlot.o libseqlib_la-GenomicRegion.o libseqlib_la-RefGenome.o libseqlib_la-BamWriter.o libseqlib_la-BamReader.o libseqlib_la-BWAWrapper.o libseqlib_la-BamRecord.o libseqlib_la-FermiAssembler.o libseqlib_la-BamHeader.o libtool: link: arm-linux-gnueabihf-ranlib .libs/libseqlib.a libtool: link: ( cd ".libs" && rm -f "libseqlib.la" && ln -s "../libseqlib.la" "libseqlib.la" ) make[3]: Leaving directory '/<>/src' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/libseqlib-1.2.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' echo "mkdir -p lib && cp src/libseqlib.a fermi-lite/libfml.a bwa/libbwa.a htslib/libhts.a lib" mkdir -p lib && cp src/libseqlib.a fermi-lite/libfml.a bwa/libbwa.a htslib/libhts.a lib make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install # Trick to get also headers moved by d-shlibmove cp -a SeqLib debian # note: also GenomicRegionCollection.cpp is really needed by freebayes d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/SeqLib usr/include \ --override s/libfml0-dev/libfml-dev/ \ --override s/libssw0-dev/libssw-dev/ \ src/.libs/libseqlib.so Library package automatic movement utility --> libfml-dev package exists. --> libhts-dev package exists. --> libjsoncpp-dev package exists. --> libssw-dev package exists. --> zlib1g-dev package exists. set -e install -d -m 755 debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf install -d -m 755 debian/libseqlib2/usr/lib/arm-linux-gnueabihf mv src/.libs/libseqlib.a debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf mv src/.libs/libseqlib.so debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf mv /<>/src/.libs/libseqlib.so.2 debian/libseqlib2/usr/lib/arm-linux-gnueabihf mv /<>/src/.libs/libseqlib.so.2.0.0 debian/libseqlib2/usr/lib/arm-linux-gnueabihf PKGDEV=libseqlib-dev PKGSHL=libseqlib2 install -d -m 755 debian/libseqlib-dev/usr/include mv debian/SeqLib debian/libseqlib-dev/usr/include mkdir -p /<>/debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf/pkgconfig mv libseqlib.pc /<>/debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf/pkgconfig make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dpkg-gensymbols: warning: debian/libseqlib2/DEBIAN/symbols doesn't match completely debian/libseqlib2.symbols --- debian/libseqlib2.symbols (libseqlib2_1.2.0+dfsg-6_armhf) +++ dpkg-gensymbols_0Amdv 2021-09-30 06:00:28.106095533 +0000 @@ -15,7 +15,7 @@ _ZN12aho_corasick13interval_treeINS_7ahoemitIcEEE4nodeD2Ev@Base 1.2.0 _ZN6SeqLib10BWAWrapper10SetGapOpenEi@Base 1.2.0 _ZN6SeqLib10BWAWrapper11SetZDropoffEi@Base 1.2.0 - (optional)_ZN6SeqLib10BWAWrapper11seqlib_add1EPK6kseq_tP8bntseq_tPhPlPiS8_PP9bntamb1_t@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZN6SeqLib10BWAWrapper11seqlib_add1EPK6kseq_tP8bntseq_tPhPlPiS8_PP9bntamb1_t@Base 1.2.0 (optional)_ZN6SeqLib10BWAWrapper11seqlib_add1EPK6kseq_tP8bntseq_tPhPxPiS8_PP9bntamb1_t@Base 1.2.0 _ZN6SeqLib10BWAWrapper12SetBandwidthEi@Base 1.2.0 _ZN6SeqLib10BWAWrapper14ConstructIndexERKSt6vectorINS_17UnalignedSequenceESaIS2_EE@Base 1.2.0 @@ -24,7 +24,7 @@ _ZN6SeqLib10BWAWrapper16SetReseedTriggerEf@Base 1.2.0 _ZN6SeqLib10BWAWrapper18SetMismatchPenaltyEi@Base 1.2.0 (optional)_ZN6SeqLib10BWAWrapper18seqlib_add_to_annsERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_P9bntann1_tj@Base 1.2.0 - (optional)_ZN6SeqLib10BWAWrapper18seqlib_add_to_annsERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_P9bntann1_tm@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZN6SeqLib10BWAWrapper18seqlib_add_to_annsERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_P9bntann1_tm@Base 1.2.0 _ZN6SeqLib10BWAWrapper18seqlib_bwt_pac2bwtEPKhi@Base 1.2.0 _ZN6SeqLib10BWAWrapper24Set3primeClippingPenaltyEi@Base 1.2.0 _ZN6SeqLib10BWAWrapper24Set5primeClippingPenaltyEi@Base 1.2.0 @@ -49,12 +49,12 @@ (optional)_ZN6SeqLib13TIntervalTreeIijEC2ERSt6vectorINS_9TIntervalIijEESaIS4_EEjjjjj@Base 1.2.0 (optional)_ZN6SeqLib13TIntervalTreeIijED1Ev@Base 1.2.0 (optional)_ZN6SeqLib13TIntervalTreeIijED2Ev@Base 1.2.0 - (optional)_ZN6SeqLib13TIntervalTreeIimEC1ERKS1_@Base 1.2.0 - (optional)_ZN6SeqLib13TIntervalTreeIimEC1ERSt6vectorINS_9TIntervalIimEESaIS4_EEmmmmm@Base 1.2.0 - (optional)_ZN6SeqLib13TIntervalTreeIimEC2ERKS1_@Base 1.2.0 - (optional)_ZN6SeqLib13TIntervalTreeIimEC2ERSt6vectorINS_9TIntervalIimEESaIS4_EEmmmmm@Base 1.2.0 - (optional)_ZN6SeqLib13TIntervalTreeIimED1Ev@Base 1.2.0 - (optional)_ZN6SeqLib13TIntervalTreeIimED2Ev@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZN6SeqLib13TIntervalTreeIimEC1ERKS1_@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZN6SeqLib13TIntervalTreeIimEC1ERSt6vectorINS_9TIntervalIimEESaIS4_EEmmmmm@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZN6SeqLib13TIntervalTreeIimEC2ERKS1_@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZN6SeqLib13TIntervalTreeIimEC2ERSt6vectorINS_9TIntervalIimEESaIS4_EEmmmmm@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZN6SeqLib13TIntervalTreeIimED1Ev@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZN6SeqLib13TIntervalTreeIimED2Ev@Base 1.2.0 _ZN6SeqLib14FermiAssembler10ClearReadsEv@Base 1.2.0 _ZN6SeqLib14FermiAssembler12ClearContigsEv@Base 1.2.0 _ZN6SeqLib14FermiAssembler12CorrectReadsEv@Base 1.2.0 @@ -80,7 +80,7 @@ _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE13CreateTreeMapEv@Base 1.2.0 (optional)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE14CoordinateSortEv@Base 1.2.0 _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE25MergeOverlappingIntervalsEv@Base 1.2.0 - (optional)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE6ConcatERKS2_@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE6ConcatERKS2_@Base 1.2.0 _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEEC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.2.0 (optional)_ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEEC1Ev@Base 1.2.0 _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEEC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_9BamHeaderE@Base 1.2.0 @@ -200,7 +200,7 @@ _ZN6SeqLiblsERSoRKNS_9BamRecordE@Base 1.2.0 _ZN6SeqLiblsERSoRKNS_9BamWriterE@Base 1.2.0 (optional)_ZN9__gnu_cxx6__stoaIlicJiEEET0_PFT_PKT1_PPS3_DpT2_EPKcS5_PjS9_@Base 1.2.0 - (optional)_ZN9__gnu_cxx6__stoaIlicJiEEET0_PFT_PKT1_PPS3_DpT2_EPKcS5_PmS9_@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZN9__gnu_cxx6__stoaIlicJiEEET0_PFT_PKT1_PPS3_DpT2_EPKcS5_PmS9_@Base 1.2.0 _ZNK6SeqLib10BWAWrapper10WriteIndexERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.2.0 _ZNK6SeqLib10BWAWrapper11ChrIDToNameB5cxx11Ei@Base 1.2.0 _ZNK6SeqLib10BWAWrapper12NumSequencesEv@Base 1.2.0 @@ -225,7 +225,7 @@ _ZNK6SeqLib13GenomicRegionltERKS0_@Base 1.2.0 _ZNK6SeqLib13GenomicRegionneERKS0_@Base 1.2.0 (optional)_ZNK6SeqLib13TIntervalTreeIijE15findOverlappingEjjRSt6vectorINS_9TIntervalIijEESaIS4_EE@Base 1.2.0 - (optional)_ZNK6SeqLib13TIntervalTreeIimE15findOverlappingEmmRSt6vectorINS_9TIntervalIimEESaIS4_EE@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNK6SeqLib13TIntervalTreeIimE15findOverlappingEmmRSt6vectorINS_9TIntervalIimEESaIS4_EE@Base 1.2.0 _ZNK6SeqLib14FermiAssembler10GetContigsB5cxx11Ev@Base 1.2.0 _ZNK6SeqLib14FermiAssembler12GetSequencesEv@Base 1.2.0 _ZNK6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE13CountOverlapsERKS1_@Base 1.2.0 @@ -265,21 +265,21 @@ _ZNK6SeqLib9BamRecord27CountBWASecondaryAlignmentsEv@Base 1.2.0 _ZNK6SeqLib9BamRecord6GetTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERS6_@Base 1.2.0 _ZNK6SeqLib9BamRecord7GetZTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERS6_@Base 1.2.0 - (optional)_ZNK6SeqLib9BamRecord8GetCigarEv@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNK6SeqLib9BamRecord8GetCigarEv@Base 1.2.0 _ZNK6SeqLib9BamRecord8SequenceB5cxx11Ev@Base 1.2.0 _ZNK6SeqLib9BamRecord9MeanPhredEv@Base 1.2.0 _ZNK6SeqLib9BamWriter10BuildIndexEv@Base 1.2.0 _ZNK6SeqLib9BamWriter11WriteHeaderEv@Base 1.2.0 _ZNK6SeqLib9RefGenome11QueryRegionERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEii@Base 1.2.0 (optional)_ZNKSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE19_M_find_before_nodeEjRS7_j@Base 1.2.0 - (optional)_ZNKSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE19_M_find_before_nodeEmRS7_m@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNKSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE19_M_find_before_nodeEmRS7_m@Base 1.2.0 (optional)_ZNKSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE5countERS7_@Base 1.2.0 (optional)_ZNKSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEE19_M_find_before_nodeEjRS7_j@Base 1.2.0 - (optional)_ZNKSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEE19_M_find_before_nodeEmRS7_m@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNKSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEE19_M_find_before_nodeEmRS7_m@Base 1.2.0 _ZNKSt5ctypeIcE8do_widenEc@Base 1.2.0 _ZNKSt5ctypeIcE9do_narrowEcc@Base 1.2.0 _ZNKSt7__cxx1112regex_traitsIcE16lookup_classnameIPKcEENS1_10_RegexMaskET_S6_b@Base 1.2.0 - (optional)_ZNKSt7__cxx1112regex_traitsIcE16translate_nocaseEc@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNKSt7__cxx1112regex_traitsIcE16translate_nocaseEc@Base 1.2.0 _ZNKSt7__cxx1112regex_traitsIcE17transform_primaryIPKcEENS_12basic_stringIcSt11char_traitsIcESaIcEEET_SA_@Base 1.2.0 _ZNKSt7__cxx1112regex_traitsIcE18lookup_collatenameIPKcEENS_12basic_stringIcSt11char_traitsIcESaIcEEET_SA_@Base 1.2.0 (optional)_ZNKSt8__detail20_RegexTranslatorBaseINSt7__cxx1112regex_traitsIcEELb0ELb1EE12_M_transformEc@Base 1.2.0 @@ -289,9 +289,9 @@ _ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE12_Scoped_nodeD1Ev@Base 1.2.0 _ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE12_Scoped_nodeD2Ev@Base 1.2.0 (optional)_ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE9_M_rehashEjRKj@Base 1.2.0 - (optional)_ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE9_M_rehashEmRKm@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE9_M_rehashEmRKm@Base 1.2.0 (optional)_ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEE9_M_rehashEjRKj@Base 1.2.0 - (optional)_ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEE9_M_rehashEmRKm@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEE9_M_rehashEmRKm@Base 1.2.0 (optional)_ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEED1Ev@Base 1.2.0 (optional)_ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEED2Ev@Base 1.2.0 (optional)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIijEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE12_Scoped_nodeD1Ev@Base 1.2.0 @@ -301,29 +301,29 @@ (optional)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIijEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE9_M_rehashEjRKj@Base 1.2.0 (optional)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIijEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEED1Ev@Base 1.2.0 (optional)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIijEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEED2Ev@Base 1.2.0 - (optional)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE12_Scoped_nodeD1Ev@Base 1.2.0 - (optional)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE12_Scoped_nodeD2Ev@Base 1.2.0 - (optional)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE4findERS1_@Base 1.2.0 - (optional)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE5clearEv@Base 1.2.0 - (optional)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE9_M_rehashEmRKm@Base 1.2.0 - (optional)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEED1Ev@Base 1.2.0 - (optional)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEED2Ev@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE12_Scoped_nodeD1Ev@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE12_Scoped_nodeD2Ev@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE4findERS1_@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE5clearEv@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE9_M_rehashEmRKm@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEED1Ev@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEED2Ev@Base 1.2.0 (optional)_ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIijEESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEE9_M_rehashEjRKj@Base 1.2.0 (optional)_ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIijEESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEED1Ev@Base 1.2.0 (optional)_ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIijEESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEED2Ev@Base 1.2.0 - (optional)_ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIimEESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEE9_M_rehashEmRKm@Base 1.2.0 - (optional)_ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIimEESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEED1Ev@Base 1.2.0 - (optional)_ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIimEESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEED2Ev@Base 1.2.0 - (optional)_ZNSt10unique_ptrIN12aho_corasick13interval_treeINS0_7ahoemitIcEEE4nodeESt14default_deleteIS5_EED1Ev@Base 1.2.0 - (optional)_ZNSt10unique_ptrIN12aho_corasick13interval_treeINS0_7ahoemitIcEEE4nodeESt14default_deleteIS5_EED2Ev@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIimEESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEE9_M_rehashEmRKm@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIimEESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEED1Ev@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIimEESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEED2Ev@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt10unique_ptrIN12aho_corasick13interval_treeINS0_7ahoemitIcEEE4nodeESt14default_deleteIS5_EED1Ev@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt10unique_ptrIN12aho_corasick13interval_treeINS0_7ahoemitIcEEE4nodeESt14default_deleteIS5_EED2Ev@Base 1.2.0 (optional)_ZNSt11_Deque_baseIlSaIlEE17_M_initialize_mapEj@Base 1.2.0 - (optional)_ZNSt11_Deque_baseIlSaIlEE17_M_initialize_mapEm@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt11_Deque_baseIlSaIlEE17_M_initialize_mapEm@Base 1.2.0 _ZNSt11_Deque_baseIlSaIlEED1Ev@Base 1.2.0 _ZNSt11_Deque_baseIlSaIlEED2Ev@Base 1.2.0 (optional)_ZNSt12_Destroy_auxILb0EE9__destroyIPN12aho_corasick7ahoemitIcEEEEvT_S6_@Base 1.2.0 (optional)_ZNSt12_Destroy_auxILb0EE9__destroyIPNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEEEvT_S9_@Base 1.2.0 (optional)_ZNSt12_Destroy_auxILb0EE9__destroyIPNSt8__detail6_StateIcEEEEvT_S6_@Base 1.2.0 - (optional)_ZNSt12_Destroy_auxILb0EE9__destroyIPSt4pairIlSt6vectorINSt7__cxx119sub_matchIN9__gnu_cxx17__normal_iteratorIPKcNS4_12basic_stringIcSt11char_traitsIcESaIcEEEEEEESaISG_EEEEEvT_SL_@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt12_Destroy_auxILb0EE9__destroyIPSt4pairIlSt6vectorINSt7__cxx119sub_matchIN9__gnu_cxx17__normal_iteratorIPKcNS4_12basic_stringIcSt11char_traitsIcESaIcEEEEEEESaISG_EEEEEvT_SL_@Base 1.2.0 (optional)_ZNSt14_Function_baseD1Ev@Base 1.2.0 (optional)_ZNSt14_Function_baseD2Ev@Base 1.2.0 (optional)_ZNSt15_Sp_counted_ptrIDnLN9__gnu_cxx12_Lock_policyE2EE10_M_disposeEv@Base 1.2.0 @@ -345,12 +345,12 @@ (optional)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIijEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EED0Ev@Base 1.2.0 (optional)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIijEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EED1Ev@Base 1.2.0 (optional)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIijEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EED2Ev@Base 1.2.0 - (optional)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIimEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EE10_M_destroyEv@Base 1.2.0 - (optional)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIimEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EE10_M_disposeEv@Base 1.2.0 - (optional)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIimEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EE14_M_get_deleterERKSt9type_info@Base 1.2.0 - (optional)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIimEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EED0Ev@Base 1.2.0 - (optional)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIimEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EED1Ev@Base 1.2.0 - (optional)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIimEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EED2Ev@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIimEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EE10_M_destroyEv@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIimEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EE10_M_disposeEv@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIimEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EE14_M_get_deleterERKSt9type_info@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIimEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EED0Ev@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIimEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EED1Ev@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIimEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EED2Ev@Base 1.2.0 (optional)_ZNSt15_Sp_counted_ptrIPSt6vectorIN6SeqLib13GenomicRegionESaIS2_EELN9__gnu_cxx12_Lock_policyE2EE10_M_destroyEv@Base 1.2.0 (optional)_ZNSt15_Sp_counted_ptrIPSt6vectorIN6SeqLib13GenomicRegionESaIS2_EELN9__gnu_cxx12_Lock_policyE2EE10_M_disposeEv@Base 1.2.0 (optional)_ZNSt15_Sp_counted_ptrIPSt6vectorIN6SeqLib13GenomicRegionESaIS2_EELN9__gnu_cxx12_Lock_policyE2EE14_M_get_deleterERKSt9type_info@Base 1.2.0 @@ -435,12 +435,12 @@ _ZNSt5dequeINSt8__detail9_StateSeqINSt7__cxx1112regex_traitsIcEEEESaIS5_EE16_M_push_back_auxIJRKS5_EEEvDpOT_@Base 1.2.0 (optional)_ZNSt5dequeINSt8__detail9_StateSeqINSt7__cxx1112regex_traitsIcEEEESaIS5_EE16_M_push_back_auxIJS5_EEEvDpOT_@Base 1.2.0 (optional)_ZNSt5dequeINSt8__detail9_StateSeqINSt7__cxx1112regex_traitsIcEEEESaIS5_EE17_M_reallocate_mapEjb@Base 1.2.0 - (optional)_ZNSt5dequeINSt8__detail9_StateSeqINSt7__cxx1112regex_traitsIcEEEESaIS5_EE17_M_reallocate_mapEmb@Base 1.2.0 - (optional)_ZNSt5dequeINSt8__detail9_StateSeqINSt7__cxx1112regex_traitsIcEEEESaIS5_EE9push_backERKS5_@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt5dequeINSt8__detail9_StateSeqINSt7__cxx1112regex_traitsIcEEEESaIS5_EE17_M_reallocate_mapEmb@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt5dequeINSt8__detail9_StateSeqINSt7__cxx1112regex_traitsIcEEEESaIS5_EE9push_backERKS5_@Base 1.2.0 (optional)_ZNSt5dequeIPN12aho_corasick5stateIcEESaIS3_EE16_M_push_back_auxIJRKS3_EEEvDpOT_@Base 1.2.0 _ZNSt5dequeIlSaIlEE16_M_push_back_auxIJRKlEEEvDpOT_@Base 1.2.0 - (optional)_ZNSt5stackIlSt5dequeIlSaIlEEEC1IS2_vEEv@Base 1.2.0 - (optional)_ZNSt5stackIlSt5dequeIlSaIlEEEC2IS2_vEEv@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt5stackIlSt5dequeIlSaIlEEEC1IS2_vEEv@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt5stackIlSt5dequeIlSaIlEEEC2IS2_vEEv@Base 1.2.0 (optional)_ZNSt6vectorI9mem_aln_tSaIS0_EE17_M_realloc_insertIJRKS0_EEEvN9__gnu_cxx17__normal_iteratorIPS0_S2_EEDpOT_@Base 1.2.0 _ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 1.2.0 (optional)_ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EE17_M_realloc_insertIJS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 1.2.0 @@ -462,24 +462,24 @@ (optional)_ZNSt6vectorIN6SeqLib9BamRecordESaIS1_EE17_M_realloc_insertIJRKS1_EEEvN9__gnu_cxx17__normal_iteratorIPS1_S3_EEDpOT_@Base 1.2.0 (optional)_ZNSt6vectorIN6SeqLib9TIntervalIijEESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 1.2.0 (optional)_ZNSt6vectorIN6SeqLib9TIntervalIijEESaIS2_EE17_M_realloc_insertIJS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 1.2.0 - (optional)_ZNSt6vectorIN6SeqLib9TIntervalIimEESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 1.2.0 - (optional)_ZNSt6vectorIN6SeqLib9TIntervalIimEESaIS2_EE17_M_realloc_insertIJS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt6vectorIN6SeqLib9TIntervalIimEESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt6vectorIN6SeqLib9TIntervalIimEESaIS2_EE17_M_realloc_insertIJS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 1.2.0 (optional)_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE12emplace_backIJS5_EEEvDpOT_@Base 1.2.0 _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_@Base 1.2.0 (optional)_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_@Base 1.2.0 - (optional)_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE9push_backERKS5_@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE9push_backERKS5_@Base 1.2.0 _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EEC1ERKS7_@Base 1.2.0 _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EEC2ERKS7_@Base 1.2.0 _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED1Ev@Base 1.2.0 _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED2Ev@Base 1.2.0 (optional)_ZNSt6vectorINSt7__cxx1112regex_traitsIcE10_RegexMaskESaIS3_EE17_M_realloc_insertIJRKS3_EEEvN9__gnu_cxx17__normal_iteratorIPS3_S5_EEDpOT_@Base 1.2.0 (optional)_ZNSt6vectorINSt7__cxx119sub_matchIN9__gnu_cxx17__normal_iteratorIPKcNS0_12basic_stringIcSt11char_traitsIcESaIcEEEEEEESaISC_EE14_M_fill_assignEjRKSC_@Base 1.2.0 - (optional)_ZNSt6vectorINSt7__cxx119sub_matchIN9__gnu_cxx17__normal_iteratorIPKcNS0_12basic_stringIcSt11char_traitsIcESaIcEEEEEEESaISC_EE14_M_fill_assignEmRKSC_@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt6vectorINSt7__cxx119sub_matchIN9__gnu_cxx17__normal_iteratorIPKcNS0_12basic_stringIcSt11char_traitsIcESaIcEEEEEEESaISC_EE14_M_fill_assignEmRKSC_@Base 1.2.0 _ZNSt6vectorINSt8__detail6_StateIcEESaIS2_EE17_M_realloc_insertIJS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 1.2.0 (optional)_ZNSt6vectorIPN12aho_corasick5stateIcEESaIS3_EE17_M_realloc_insertIJS3_EEEvN9__gnu_cxx17__normal_iteratorIPS3_S5_EEDpOT_@Base 1.2.0 (optional)_ZNSt6vectorIPN6SeqLib11PlottedReadESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 1.2.0 (optional)_ZNSt6vectorIPcSaIS0_EE17_M_realloc_insertIJS0_EEEvN9__gnu_cxx17__normal_iteratorIPS0_S2_EEDpOT_@Base 1.2.0 - (optional)_ZNSt6vectorISt4pairINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_ESaIS7_EE12emplace_backIJS7_EEEvDpOT_@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt6vectorISt4pairINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_ESaIS7_EE12emplace_backIJS7_EEEvDpOT_@Base 1.2.0 (optional)_ZNSt6vectorISt4pairINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_ESaIS7_EE17_M_realloc_insertIJS7_EEEvN9__gnu_cxx17__normal_iteratorIPS7_S9_EEDpOT_@Base 1.2.0 (optional)_ZNSt6vectorISt4pairINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_ESaIS7_EEC1ERKS9_@Base 1.2.0 (optional)_ZNSt6vectorISt4pairINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_ESaIS7_EEC2ERKS9_@Base 1.2.0 @@ -497,7 +497,7 @@ (optional)_ZNSt6vectorIdSaIdEE17_M_realloc_insertIJdEEEvN9__gnu_cxx17__normal_iteratorIPdS1_EEDpOT_@Base 1.2.0 (optional)_ZNSt6vectorIiSaIiEE17_M_realloc_insertIJiEEEvN9__gnu_cxx17__normal_iteratorIPiS1_EEDpOT_@Base 1.2.0 (optional)_ZNSt6vectorIjSaIjEE17_M_realloc_insertIJRKjEEEvN9__gnu_cxx17__normal_iteratorIPjS1_EEDpOT_@Base 1.2.0 - (optional)_ZNSt6vectorImSaImEE17_M_realloc_insertIJRKmEEEvN9__gnu_cxx17__normal_iteratorIPmS1_EEDpOT_@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt6vectorImSaImEE17_M_realloc_insertIJRKmEEEvN9__gnu_cxx17__normal_iteratorIPmS1_EEDpOT_@Base 1.2.0 (optional)_ZNSt7__cxx1110_List_baseIN6SeqLib13GenomicRegionESaIS2_EE8_M_clearEv@Base 1.2.0 _ZNSt7__cxx1111basic_regexIcNS_12regex_traitsIcEEED1Ev@Base 1.2.0 _ZNSt7__cxx1111basic_regexIcNS_12regex_traitsIcEEED2Ev@Base 1.2.0 @@ -507,42 +507,42 @@ _ZNSt7__cxx114listIN6SeqLib13GenomicRegionESaIS2_EE4sortEv@Base 1.2.0 _ZNSt7__cxx114listIN6SeqLib13GenomicRegionESaIS2_EE5mergeEOS4_@Base 1.2.0 _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_St9_IdentityIS5_ESt4lessIS5_ESaIS5_EE16_M_insert_uniqueIRKS5_EESt4pairISt17_Rb_tree_iteratorIS5_EbEOT_@Base 1.2.0 - (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_St9_IdentityIS5_ESt4lessIS5_ESaIS5_EEC1ERKSB_@Base 1.2.0 - (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_St9_IdentityIS5_ESt4lessIS5_ESaIS5_EEC2ERKSB_@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_St9_IdentityIS5_ESt4lessIS5_ESaIS5_EEC1ERKSB_@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_St9_IdentityIS5_ESt4lessIS5_ESaIS5_EEC2ERKSB_@Base 1.2.0 _ZNSt8_Rb_treeIcSt4pairIKcSt10unique_ptrIN12aho_corasick5stateIcEESt14default_deleteIS5_EEESt10_Select1stIS9_ESt4lessIcESaIS9_EE24_M_get_insert_unique_posERS1_@Base 1.2.0 - (optional)_ZNSt8_Rb_treeIcSt4pairIKcSt10unique_ptrIN12aho_corasick5stateIcEESt14default_deleteIS5_EEESt10_Select1stIS9_ESt4lessIcESaIS9_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS9_ERS1_@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt8_Rb_treeIcSt4pairIKcSt10unique_ptrIN12aho_corasick5stateIcEESt14default_deleteIS5_EEESt10_Select1stIS9_ESt4lessIcESaIS9_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS9_ERS1_@Base 1.2.0 (optional)_ZNSt8_Rb_treeIlSt4pairIKllESt10_Select1stIS2_ESt4lessIlESaIS2_EE24_M_get_insert_unique_posERS1_@Base 1.2.0 - (optional)_ZNSt8_Rb_treeIlSt4pairIKllESt10_Select1stIS2_ESt4lessIlESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_@Base 1.2.0 - (optional)_ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb0ELb0EE13_M_make_rangeEcc@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt8_Rb_treeIlSt4pairIKllESt10_Select1stIS2_ESt4lessIlESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb0ELb0EE13_M_make_rangeEcc@Base 1.2.0 _ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb0ELb0EE8_M_readyEv@Base 1.2.0 _ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb0ELb0EED1Ev@Base 1.2.0 _ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb0ELb0EED2Ev@Base 1.2.0 _ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb0ELb1EE13_M_make_rangeEcc@Base 1.2.0 - (optional)_ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb0ELb1EE8_M_readyEv@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb0ELb1EE8_M_readyEv@Base 1.2.0 _ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb0ELb1EED1Ev@Base 1.2.0 _ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb0ELb1EED2Ev@Base 1.2.0 - (optional)_ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb1ELb0EE13_M_make_rangeEcc@Base 1.2.0 - (optional)_ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb1ELb0EE8_M_readyEv@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb1ELb0EE13_M_make_rangeEcc@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb1ELb0EE8_M_readyEv@Base 1.2.0 _ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb1ELb0EED1Ev@Base 1.2.0 _ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb1ELb0EED2Ev@Base 1.2.0 _ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb1ELb1EE13_M_make_rangeEcc@Base 1.2.0 - (optional)_ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb1ELb1EE8_M_readyEv@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb1ELb1EE8_M_readyEv@Base 1.2.0 _ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb1ELb1EED1Ev@Base 1.2.0 _ZNSt8__detail15_BracketMatcherINSt7__cxx1112regex_traitsIcEELb1ELb1EED2Ev@Base 1.2.0 _ZNSt8__detail17__regex_algo_implIN9__gnu_cxx17__normal_iteratorIPKcNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEEESaINS5_9sub_matchISB_EEEcNS5_12regex_traitsIcEELNS_20_RegexExecutorPolicyE0ELb1EEEbT_SI_RNS5_13match_resultsISI_T0_EERKNS5_11basic_regexIT1_T2_EENSt15regex_constants15match_flag_typeE@Base 1.2.0 (optional)_ZNSt8__detail4_NFAINSt7__cxx1112regex_traitsIcEEE15_M_insert_dummyEv@Base 1.2.0 - (optional)_ZNSt8__detail4_NFAINSt7__cxx1112regex_traitsIcEEE15_M_insert_stateENS_6_StateIcEE@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZNSt8__detail4_NFAINSt7__cxx1112regex_traitsIcEEE15_M_insert_stateENS_6_StateIcEE@Base 1.2.0 _ZNSt8__detail4_NFAINSt7__cxx1112regex_traitsIcEEE16_M_insert_repeatEllb@Base 1.2.0 (optional)_ZNSt8__detail4_NFAINSt7__cxx1112regex_traitsIcEEE17_M_insert_backrefEj@Base 1.2.0 - (optional)_ZNSt8__detail4_NFAINSt7__cxx1112regex_traitsIcEEE17_M_insert_backrefEm@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# 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(optional)_ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEOS8_PKS5_@Base 1.2.0 _ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEOS8_S9_@Base 1.2.0 _ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEPKS5_RKS8_@Base 1.2.0 (optional)_ZTI10idx_delete@Base 1.2.0 @@ -667,7 +667,7 @@ (optional)_ZTISt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.2.0 (optional)_ZTISt15_Sp_counted_ptrIPSt13unordered_mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4hashIS6_ESt8equal_toIS6_ESaISt4pairIKS6_iEEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.2.0 (optional)_ZTISt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIijEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.2.0 - (optional)_ZTISt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIimEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.2.0 +#MISSING: 1.2.0+dfsg-6# (optional)_ZTISt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIimEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.2.0 (optional)_ZTISt15_Sp_counted_ptrIPSt6vectorIN6SeqLib13GenomicRegionESaIS2_EELN9__gnu_cxx12_Lock_policyE2EE@Base 1.2.0 (optional)_ZTISt16_Sp_counted_baseILN9__gnu_cxx12_Lock_policyE2EE@Base 1.2.0 (optional)_ZTISt19_Sp_counted_deleterIP6bam1_tN6SeqLib11free_deleteESaIvELN9__gnu_cxx12_Lock_policyE2EE@Base 1.2.0 @@ -702,7 +702,7 @@ (optional)_ZTSSt15_Sp_counted_ptrIPN12aho_corasick10basic_trieIcEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.2.0 (optional)_ZTSSt15_Sp_counted_ptrIPSt13unordered_mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4hashIS6_ESt8equal_toIS6_ESaISt4pairIKS6_iEEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.2.0 (optional)_ZTSSt15_Sp_counted_ptrIPSt13unordered_mapIiN6SeqLib13TIntervalTreeIijEESt4hashIiESt8equal_toIiESaISt4pairIKiS3_EEELN9__gnu_cxx12_Lock_policyE2EE@Base 1.2.0 - 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(optional)_ZZNSt8__detail9_CompilerINSt7__cxx1112regex_traitsIcEEE18_M_expression_termILb1ELb1EEEbRSt4pairIbcERNS_15_BracketMatcherIS3_XT_EXT0_EEEENKUlvE0_clEv@Base 1.2.0 dh_shlibdeps -a dpkg-shlibdeps: warning: symbol bwt_cal_sa used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol err_xopen_core used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwa_idx_load used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwt_gen_cnt_table used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol kseq_init used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol err_fflush used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol mem_align1 used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol err_fwrite used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwa_fill_scmat used by debian/libseqlib2/usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'libseqlib2' in '../libseqlib2_1.2.0+dfsg-6_armhf.deb'. dpkg-deb: building package 'libseqlib2-dbgsym' in '../libseqlib2-dbgsym_1.2.0+dfsg-6_armhf.deb'. dpkg-deb: building package 'libseqlib-dev' in '../libseqlib-dev_1.2.0+dfsg-6_armhf.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../libseqlib_1.2.0+dfsg-6_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2021-09-30T06:00:31Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libseqlib_1.2.0+dfsg-6_armhf.changes: ------------------------------------- Format: 1.8 Date: Tue, 31 Aug 2021 21:30:32 +0200 Source: libseqlib Binary: libseqlib-dev libseqlib2 libseqlib2-dbgsym Built-For-Profiles: cross nocheck Architecture: armhf Version: 1.2.0+dfsg-6 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: libseqlib-dev - C++ htslib/bwa-mem/fermi interface for interrogating sequence dat libseqlib2 - C++ htslib/bwa-mem/fermi interface for interrogating sequence dat Changes: libseqlib (1.2.0+dfsg-6) unstable; urgency=medium . * Really fix watch file Checksums-Sha1: 0ffe8d05d0bc9242268f03428bf5414c9f73c5c4 207672 libseqlib-dev_1.2.0+dfsg-6_armhf.deb d355b4e3465369442b679b75fb25d784c49dcd5b 2276440 libseqlib2-dbgsym_1.2.0+dfsg-6_armhf.deb f9ee2c9fd363caec4549bccb734b681a6a3120dd 142416 libseqlib2_1.2.0+dfsg-6_armhf.deb 58d10ff1afc0984acfbff5e825e2b646a17d6bbb 6945 libseqlib_1.2.0+dfsg-6_armhf.buildinfo Checksums-Sha256: 4fe95134a7f7b0bd26e55a92f6067a88c595eabdd0e22b07c068aefbd00ee593 207672 libseqlib-dev_1.2.0+dfsg-6_armhf.deb bb091e892cab6162b7738de5be1b4ff14ef7efc6da64cb7b21eb496277b45559 2276440 libseqlib2-dbgsym_1.2.0+dfsg-6_armhf.deb 00b3e015403a630d928af5b057b2fdb9f38a91cc5a08932a192d5d3a3a6b3c2f 142416 libseqlib2_1.2.0+dfsg-6_armhf.deb cb198eca40464361b91b983e713a3ed9b1291c039ed6b071bede64285b6035a6 6945 libseqlib_1.2.0+dfsg-6_armhf.buildinfo Files: 82061cc7df381b16af4f5c70e12339bd 207672 libdevel optional libseqlib-dev_1.2.0+dfsg-6_armhf.deb cbc2904671aff23662811179788b1c49 2276440 debug optional libseqlib2-dbgsym_1.2.0+dfsg-6_armhf.deb 919af5b1c0f7013509bd5a3f2b5a8cfa 142416 libs optional libseqlib2_1.2.0+dfsg-6_armhf.deb 0b990caf9d3a32b0878384c6d95a6501 6945 science optional libseqlib_1.2.0+dfsg-6_armhf.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: libseqlib Binary: libseqlib-dev libseqlib2 libseqlib2-dbgsym Architecture: armhf Version: 1.2.0+dfsg-6 Checksums-Md5: 82061cc7df381b16af4f5c70e12339bd 207672 libseqlib-dev_1.2.0+dfsg-6_armhf.deb cbc2904671aff23662811179788b1c49 2276440 libseqlib2-dbgsym_1.2.0+dfsg-6_armhf.deb 919af5b1c0f7013509bd5a3f2b5a8cfa 142416 libseqlib2_1.2.0+dfsg-6_armhf.deb Checksums-Sha1: 0ffe8d05d0bc9242268f03428bf5414c9f73c5c4 207672 libseqlib-dev_1.2.0+dfsg-6_armhf.deb d355b4e3465369442b679b75fb25d784c49dcd5b 2276440 libseqlib2-dbgsym_1.2.0+dfsg-6_armhf.deb f9ee2c9fd363caec4549bccb734b681a6a3120dd 142416 libseqlib2_1.2.0+dfsg-6_armhf.deb Checksums-Sha256: 4fe95134a7f7b0bd26e55a92f6067a88c595eabdd0e22b07c068aefbd00ee593 207672 libseqlib-dev_1.2.0+dfsg-6_armhf.deb bb091e892cab6162b7738de5be1b4ff14ef7efc6da64cb7b21eb496277b45559 2276440 libseqlib2-dbgsym_1.2.0+dfsg-6_armhf.deb 00b3e015403a630d928af5b057b2fdb9f38a91cc5a08932a192d5d3a3a6b3c2f 142416 libseqlib2_1.2.0+dfsg-6_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Thu, 30 Sep 2021 06:00:31 +0000 Build-Path: /<> Installed-Build-Depends: adduser (= 3.118), apt (= 2.3.9), autoconf (= 2.71-2), automake (= 1:1.16.4-2), autopoint (= 0.21-4), autotools-dev (= 20180224.1+nmu1), base-files (= 12), base-passwd (= 3.5.52), bash (= 5.1-3+b1), binutils (= 2.37-7), binutils-common (= 2.37-7), binutils-x86-64-linux-gnu (= 2.37-7), bsdextrautils (= 2.37.2-3), bsdutils (= 1:2.37.2-3), build-essential (= 12.9), bzip2 (= 1.0.8-4), coreutils (= 8.32-4+b1), cpp (= 4:10.2.1-1), cpp-10 (= 10.3.0-11), d-shlibs (= 0.100), dash (= 0.5.11+git20210120+802ebd4-1), debconf (= 1.5.77), debhelper (= 13.5.2), debian-archive-keyring (= 2021.1.1), debianutils (= 5.5-1), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.12.0-1), diffutils (= 1:3.7-5), dpkg (= 1.20.9), dpkg-dev (= 1.20.9), dwz (= 0.14-1), file (= 1:5.39-3), findutils (= 4.8.0-1), g++ (= 4:10.2.1-1), g++-10 (= 10.3.0-11), gcc (= 4:10.2.1-1), gcc-10 (= 10.3.0-11), gcc-10-base (= 10.3.0-11), gcc-11-base (= 11.2.0-8), gettext (= 0.21-4), gettext-base (= 0.21-4), gpgv (= 2.2.27-2), grep (= 3.7-1), groff-base (= 1.22.4-7), gzip (= 1.10-4), hostname (= 3.23), init-system-helpers (= 1.60), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.3.1-1), libapt-pkg6.0 (= 2.3.9), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.2.0-8), libatomic1 (= 11.2.0-8), libattr1 (= 1:2.5.1-1), libaudit-common (= 1:3.0.5-1), libaudit1 (= 1:3.0.5-1), libbinutils (= 2.37-7), libblkid1 (= 2.37.2-3), libbrotli1 (= 1.0.9-2+b2), libbwa-dev (= 0.7.17-6+b1), libbz2-1.0 (= 1.0.8-4), libbz2-dev (= 1.0.8-4), libc-bin (= 2.32-4), libc-dev-bin (= 2.32-4), libc6 (= 2.32-4), libc6-dev (= 2.32-4), libcap-ng0 (= 0.7.9-2.2+b1), libcap2 (= 1:2.44-1), libcc1-0 (= 11.2.0-8), libcom-err2 (= 1.46.4-1), libcrypt-dev (= 1:4.4.25-2), libcrypt1 (= 1:4.4.25-2), libctf-nobfd0 (= 2.37-7), libctf0 (= 2.37-7), libcurl3-gnutls (= 7.74.0-1.3+b1), libcurl4-gnutls-dev (= 7.74.0-1.3+b1), libdb5.3 (= 5.3.28+dfsg1-0.8), libdebconfclient0 (= 0.260), libdebhelper-perl (= 13.5.2), libdeflate-dev (= 1.7-2), libdeflate0 (= 1.7-2), libdpkg-perl (= 1.20.9), libelf1 (= 0.185-2), libexpat1 (= 2.4.1-2+b1), libffi8 (= 3.4.2-2), libfile-stripnondeterminism-perl (= 1.12.0-1), libfml-dev (= 0.1+git20190320.b499514-1+b1), libfml0 (= 0.1+git20190320.b499514-1+b1), libgcc-10-dev (= 10.3.0-11), libgcc-s1 (= 11.2.0-8), libgcrypt20 (= 1.9.4-3+b1), libgdbm-compat4 (= 1.21-1), libgdbm6 (= 1.21-1), libglib2.0-0 (= 2.70.0-1+b1), libgmp10 (= 2:6.2.1+dfsg-2), libgnutls30 (= 3.7.2-2), libgomp1 (= 11.2.0-8), libgpg-error0 (= 1.42-3), libgssapi-krb5-2 (= 1.18.3-7), libhogweed6 (= 3.7.3-1), libhts-dev (= 1.13+ds-2), libhts3 (= 1.13+ds-2), libhtscodecs2 (= 1.1.1-3+b1), libicu67 (= 67.1-7), libidn2-0 (= 2.3.2-2), libisl23 (= 0.23-1), libitm1 (= 11.2.0-8), libjsoncpp-dev (= 1.9.4-5), libjsoncpp24 (= 1.9.4-5), libk5crypto3 (= 1.18.3-7), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.18.3-7), libkrb5support0 (= 1.18.3-7), libldap-2.4-2 (= 2.4.59+dfsg-1), liblsan0 (= 11.2.0-8), liblz4-1 (= 1.9.3-2), liblzma-dev (= 5.2.5-2), liblzma5 (= 5.2.5-2), libmagic-mgc (= 1:5.39-3), libmagic1 (= 1:5.39-3), libmount1 (= 2.37.2-3), libmpc3 (= 1.2.0-1), libmpdec3 (= 2.5.1-2), libmpfr6 (= 4.1.0-3), libncursesw6 (= 6.2+20210905-1), libnettle8 (= 3.7.3-1), libnghttp2-14 (= 1.43.0-1), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libp11-kit0 (= 0.24.0-2+b1), libpam-modules (= 1.4.0-10), libpam-modules-bin (= 1.4.0-10), libpam-runtime (= 1.4.0-10), libpam0g (= 1.4.0-10), libpcre2-8-0 (= 10.36-2), libpcre3 (= 2:8.39-13), libperl5.32 (= 5.32.1-6), libpipeline1 (= 1.5.3-1), libpsl5 (= 0.21.0-1.2), libpython3-stdlib (= 3.9.2-3), libpython3.9-minimal (= 3.9.7-4), libpython3.9-stdlib (= 3.9.7-4), libquadmath0 (= 11.2.0-8), libreadline8 (= 8.1-2), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2), libsasl2-2 (= 2.1.27+dfsg-2.1), libsasl2-modules-db (= 2.1.27+dfsg-2.1), libseccomp2 (= 2.5.2-1), libselinux1 (= 3.1-3), libsemanage-common (= 3.1-1), libsemanage1 (= 3.1-1+b2), libsepol1 (= 3.1-1), libsigsegv2 (= 2.13-1), libsmartcols1 (= 2.37.2-3), libsqlite3-0 (= 3.36.0-2), libssh2-1 (= 1.10.0-2), libssl1.1 (= 1.1.1l-1), libssw-dev (= 1.1-13), libssw0 (= 1.1-13), libstdc++-10-dev (= 10.3.0-11), libstdc++6 (= 11.2.0-8), libsub-override-perl (= 0.09-2), libsystemd0 (= 247.9-3), libtasn1-6 (= 4.17.0-2), libtinfo6 (= 6.2+20210905-1), libtirpc-common (= 1.3.2-2), libtirpc-dev (= 1.3.2-2), libtirpc3 (= 1.3.2-2), libtool (= 2.4.6-15), libtsan0 (= 11.2.0-8), libubsan1 (= 11.2.0-8), libuchardet0 (= 0.0.7-1), libudev1 (= 247.9-3), libunistring2 (= 0.9.10-6), libuuid1 (= 2.37.2-3), libxml2 (= 2.9.12+dfsg-5), libxxhash0 (= 0.8.0-2), libzstd1 (= 1.4.8+dfsg-2.1), linux-libc-dev (= 5.14.6-3), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-5), make (= 4.3-4.1), man-db (= 2.9.4-2), mawk (= 1.3.4.20200120-2), media-types (= 4.0.0), ncurses-base (= 6.2+20210905-1), ncurses-bin (= 6.2+20210905-1), passwd (= 1:4.8.1-1), patch (= 2.7.6-7), perl (= 5.32.1-6), perl-base (= 5.32.1-6), perl-modules-5.32 (= 5.32.1-6), pkg-config (= 0.29.2-1), pkg-kde-tools (= 0.15.32), po-debconf (= 1.0.21+nmu1), python3 (= 3.9.2-3), python3-minimal (= 3.9.2-3), python3.9 (= 3.9.7-4), python3.9-minimal (= 3.9.7-4), readline-common (= 8.1-2), rpcsvc-proto (= 1.4.2-4), sed (= 4.8-1), sensible-utils (= 0.0.17), sysvinit-utils (= 3.00-1), tar (= 1.34+dfsg-1), tzdata (= 2021b-1), util-linux (= 2.37.2-3), xz-utils (= 5.2.5-2), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1630438232" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libseqlib-dev_1.2.0+dfsg-6_armhf.deb ------------------------------------ new Debian package, version 2.0. size 207672 bytes: control archive=1752 bytes. 1333 bytes, 25 lines control 1735 bytes, 25 lines md5sums Package: libseqlib-dev Source: libseqlib Version: 1.2.0+dfsg-6 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 993 Depends: libseqlib2 (= 1.2.0+dfsg-6), libfml-dev, libhts-dev, libjsoncpp-dev, libssw-dev, zlib1g-dev, libbwa-dev Section: libdevel Priority: optional Multi-Arch: same Homepage: https://github.com/walaj/SeqLib Description: C++ htslib/bwa-mem/fermi interface for interrogating sequence data (dev) C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment. . This package contains the header files and static library. drwxr-xr-x root/root 0 2021-08-31 19:30 ./ drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/ drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/include/ drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/include/SeqLib/ -rw-r--r-- root/root 3874 2021-08-31 19:30 ./usr/include/SeqLib/BFC.h -rw-r--r-- root/root 7129 2021-01-07 04:18 ./usr/include/SeqLib/BWAWrapper.h -rw-r--r-- root/root 3605 2021-08-31 19:30 ./usr/include/SeqLib/BamHeader.h -rw-r--r-- root/root 9275 2021-01-07 04:18 ./usr/include/SeqLib/BamReader.h -rw-r--r-- root/root 32406 2021-08-31 19:30 ./usr/include/SeqLib/BamRecord.h -rw-r--r-- root/root 1979 2021-01-07 04:18 ./usr/include/SeqLib/BamWalker.h -rw-r--r-- root/root 3473 2021-01-07 04:18 ./usr/include/SeqLib/BamWriter.h -rw-r--r-- root/root 1170 2021-01-07 04:18 ./usr/include/SeqLib/FastqReader.h -rw-r--r-- root/root 4281 2021-08-31 19:30 ./usr/include/SeqLib/FermiAssembler.h -rw-r--r-- root/root 6354 2021-01-07 04:18 ./usr/include/SeqLib/GenomicRegion.h -rw-r--r-- root/root 19869 2021-01-07 04:18 ./usr/include/SeqLib/GenomicRegionCollection.cpp -rw-r--r-- root/root 11804 2021-01-07 04:18 ./usr/include/SeqLib/GenomicRegionCollection.h -rw-r--r-- root/root 7320 2021-01-07 04:18 ./usr/include/SeqLib/IntervalTree.h -rw-r--r-- root/root 17538 2021-01-07 04:18 ./usr/include/SeqLib/ReadFilter.h -rw-r--r-- root/root 1387 2021-08-31 19:30 ./usr/include/SeqLib/RefGenome.h -rw-r--r-- root/root 3832 2021-01-07 04:18 ./usr/include/SeqLib/SeqLibCommon.h -rw-r--r-- root/root 4176 2021-01-07 04:18 ./usr/include/SeqLib/SeqLibUtils.h -rw-r--r-- root/root 2455 2021-01-07 04:18 ./usr/include/SeqLib/SeqPlot.h -rw-r--r-- root/root 577 2021-01-07 04:18 ./usr/include/SeqLib/ThreadPool.h -rw-r--r-- root/root 2421 2021-01-07 04:18 ./usr/include/SeqLib/UnalignedSequence.h -rw-r--r-- root/root 17078 2021-01-07 04:18 ./usr/include/SeqLib/aho_corasick.hpp drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/lib/ drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/lib/arm-linux-gnueabihf/ -rw-r--r-- root/root 823536 2021-08-31 19:30 ./usr/lib/arm-linux-gnueabihf/libseqlib.a lrwxrwxrwx root/root 0 2021-08-31 19:30 ./usr/lib/arm-linux-gnueabihf/libseqlib.so -> libseqlib.so.2.0.0 drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/lib/arm-linux-gnueabihf/pkgconfig/ -rw-r--r-- root/root 301 2021-08-31 19:30 ./usr/lib/arm-linux-gnueabihf/pkgconfig/libseqlib.pc drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/share/ drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/share/doc/libseqlib-dev/ -rw-r--r-- root/root 1895 2021-08-31 19:30 ./usr/share/doc/libseqlib-dev/changelog.Debian.gz -rw-r--r-- root/root 2658 2021-08-31 19:30 ./usr/share/doc/libseqlib-dev/copyright libseqlib2-dbgsym_1.2.0+dfsg-6_armhf.deb ---------------------------------------- new Debian package, version 2.0. size 2276440 bytes: control archive=556 bytes. 409 bytes, 13 lines control 106 bytes, 1 lines md5sums Package: libseqlib2-dbgsym Source: libseqlib Version: 1.2.0+dfsg-6 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 2340 Depends: libseqlib2 (= 1.2.0+dfsg-6) Section: debug Priority: optional Multi-Arch: same Description: debug symbols for libseqlib2 Build-Ids: fc6f690bc2255499a9dc21f8b5f6e203c27d21f0 drwxr-xr-x root/root 0 2021-08-31 19:30 ./ drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/ drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/lib/ drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/lib/debug/ drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/lib/debug/.build-id/fc/ -rw-r--r-- root/root 2385612 2021-08-31 19:30 ./usr/lib/debug/.build-id/fc/6f690bc2255499a9dc21f8b5f6e203c27d21f0.debug drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/share/ drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/share/doc/ lrwxrwxrwx root/root 0 2021-08-31 19:30 ./usr/share/doc/libseqlib2-dbgsym -> libseqlib2 libseqlib2_1.2.0+dfsg-6_armhf.deb --------------------------------- new Debian package, version 2.0. size 142416 bytes: control archive=7200 bytes. 1330 bytes, 23 lines control 229 bytes, 3 lines md5sums 39 bytes, 1 lines shlibs 66029 bytes, 639 lines symbols 67 bytes, 2 lines triggers Package: libseqlib2 Source: libseqlib Version: 1.2.0+dfsg-6 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 391 Depends: libc6 (>= 2.4), libfml0 (>= 0.1+git20190320.b499514), libgcc-s1 (>= 3.5), libhts3 (>= 1.10), libjsoncpp24 (>= 1.9.4), libssw0 (>= 1.1), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4) Section: libs Priority: optional Multi-Arch: same Homepage: https://github.com/walaj/SeqLib Description: C++ htslib/bwa-mem/fermi interface for interrogating sequence data C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment. drwxr-xr-x root/root 0 2021-08-31 19:30 ./ drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/ drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/lib/ drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/lib/arm-linux-gnueabihf/ lrwxrwxrwx root/root 0 2021-08-31 19:30 ./usr/lib/arm-linux-gnueabihf/libseqlib.so.2 -> libseqlib.so.2.0.0 -rw-r--r-- root/root 317348 2021-08-31 19:30 ./usr/lib/arm-linux-gnueabihf/libseqlib.so.2.0.0 drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/share/ drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-08-31 19:30 ./usr/share/doc/libseqlib2/ -rw-r--r-- root/root 1895 2021-08-31 19:30 ./usr/share/doc/libseqlib2/changelog.Debian.gz -rw-r--r-- root/root 2658 2021-08-31 19:30 ./usr/share/doc/libseqlib2/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [632 B] Get:5 copy:/<>/apt_archive ./ Packages [716 B] Fetched 2311 B in 0s (88.2 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libwww-perl binutils-multiarch libtext-template-perl zip Recommended packages: gnupg liblist-someutils-xs-perl libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils sbuild-build-depends-lintian-dummy:armhf t1utils unzip 0 upgraded, 94 newly installed, 0 to remove and 0 not upgraded. Need to get 6777 kB of archives. After this operation, 20.1 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.64-1 [36.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.5-1 [51.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.27-2 [547 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.27-2 [927 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libaliased-perl all 0.34-1.1 [14.1 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.40 [72.2 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b3 [11.3 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1.1 [12.7 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b2 [15.9 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b3 [25.7 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1.1 [12.4 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b3 [45.7 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.24-1.1 [18.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b7 [38.1 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1+b1 [15.4 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-tiny-perl all 2.27-1 [17.1 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-util-perl amd64 1.102-1+b1 [25.6 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-install-perl all 0.928-1.1 [10.8 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-optlist-perl all 0.112-1 [11.8 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-perl all 0.988-1 [51.9 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libconst-fast-perl all 0.014-1.1 [8552 B] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.26-1 [129 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-perl all 0.03+ds1-1.1 [18.4 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-1.1 [13.7 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002002-1 [37.8 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-xs-perl amd64 0.430-2 [40.9 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-messagepack-perl amd64 1.01-2 [35.5 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1.1 [33.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b2 [26.1 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-address-xs-perl amd64 1.04-1+b3 [28.0 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.09-1 [16.4 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1.1 [6956 B] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.11-1 [8888 B] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1.1 [318 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-html5-entities-perl all 0.004-1.1 [21.3 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libio-interactive-perl all 1.023-1 [11.5 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libio-prompt-tiny-perl all 0.003-1 [9150 B] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004003-1 [13.1 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-someutils-perl all 0.58-1 [36.5 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-utilsby-perl all 0.11-1 [15.4 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.005004-2 [60.4 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1.1 [10.8 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libmouse-perl amd64 2.5.10-1+b1 [172 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.39-1 [21.9 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b3 [12.0 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1+b1 [13.8 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.118-1 [53.5 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-gzip-perl amd64 0.19-1+b7 [17.4 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-utf8-strict-perl amd64 0.008-1+b1 [12.0 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libproc-processtable-perl amd64 0.611-1 [45.9 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.018+ds-1+b1 [99.3 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.018+ds-1+b1 [103 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libsort-versions-perl all 1.62-1 [11.0 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libterm-readkey-perl amd64 2.38-1+b2 [27.8 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-4+b8 [8724 B] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.13-1 [13.2 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.8-1+b1 [197 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b3 [75.8 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.012004-1 [351 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b2 [20.3 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 5.08-1 [90.6 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.83+ds-1 [35.5 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.22-3 [88.5 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-26 [171 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.106.1 [1332 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 6777 kB in 0s (30.5 MB/s) Selecting previously unselected package diffstat. (Reading database ... 22154 files and directories currently installed.) Preparing to unpack .../00-diffstat_1.64-1_amd64.deb ... Unpacking diffstat (1.64-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../01-libassuan0_2.5.5-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.5-1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../02-gpgconf_2.2.27-2_amd64.deb ... Unpacking gpgconf (2.2.27-2) ... Selecting previously unselected package gpg. Preparing to unpack .../03-gpg_2.2.27-2_amd64.deb ... Unpacking gpg (2.2.27-2) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../04-libaliased-perl_0.34-1.1_all.deb ... Unpacking libaliased-perl (0.34-1.1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../05-libapt-pkg-perl_0.1.40_amd64.deb ... Unpacking libapt-pkg-perl (0.1.40) ... Selecting previously unselected package libb-hooks-op-check-perl. Preparing to unpack .../06-libb-hooks-op-check-perl_0.22-1+b3_amd64.deb ... Unpacking libb-hooks-op-check-perl (0.22-1+b3) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../07-libdynaloader-functions-perl_0.003-1.1_all.deb ... Unpacking libdynaloader-functions-perl (0.003-1.1) ... Selecting previously unselected package libdevel-callchecker-perl. Preparing to unpack .../08-libdevel-callchecker-perl_0.008-1+b2_amd64.deb ... Unpacking libdevel-callchecker-perl (0.008-1+b2) ... Selecting previously unselected package libparams-classify-perl. Preparing to unpack .../09-libparams-classify-perl_0.015-1+b3_amd64.deb ... Unpacking libparams-classify-perl (0.015-1+b3) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../10-libmodule-runtime-perl_0.016-1_all.deb ... Unpacking libmodule-runtime-perl (0.016-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../11-libtry-tiny-perl_0.30-1_all.deb ... Unpacking libtry-tiny-perl (0.30-1) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../12-libmodule-implementation-perl_0.09-1.1_all.deb ... Unpacking libmodule-implementation-perl (0.09-1.1) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../13-libsub-exporter-progressive-perl_0.001013-1_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-1) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../14-libvariable-magic-perl_0.62-1+b3_amd64.deb ... Unpacking libvariable-magic-perl (0.62-1+b3) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../15-libb-hooks-endofscope-perl_0.24-1.1_all.deb ... Unpacking libb-hooks-endofscope-perl (0.24-1.1) ... Selecting previously unselected package libcapture-tiny-perl. 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Unpacking libconfig-tiny-perl (2.27-1) ... Selecting previously unselected package libparams-util-perl. Preparing to unpack .../22-libparams-util-perl_1.102-1+b1_amd64.deb ... Unpacking libparams-util-perl (1.102-1+b1) ... Selecting previously unselected package libsub-install-perl. Preparing to unpack .../23-libsub-install-perl_0.928-1.1_all.deb ... Unpacking libsub-install-perl (0.928-1.1) ... Selecting previously unselected package libdata-optlist-perl. Preparing to unpack .../24-libdata-optlist-perl_0.112-1_all.deb ... Unpacking libdata-optlist-perl (0.112-1) ... Selecting previously unselected package libsub-exporter-perl. Preparing to unpack .../25-libsub-exporter-perl_0.988-1_all.deb ... Unpacking libsub-exporter-perl (0.988-1) ... Selecting previously unselected package libconst-fast-perl. Preparing to unpack .../26-libconst-fast-perl_0.014-1.1_all.deb ... Unpacking libconst-fast-perl (0.014-1.1) ... Selecting previously unselected package libcpanel-json-xs-perl. Preparing to unpack .../27-libcpanel-json-xs-perl_4.26-1_amd64.deb ... Unpacking libcpanel-json-xs-perl (4.26-1) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../28-libdevel-stacktrace-perl_2.0400-1_all.deb ... Unpacking libdevel-stacktrace-perl (2.0400-1) ... Selecting previously unselected package libexception-class-perl. Preparing to unpack .../29-libexception-class-perl_1.45-1_all.deb ... Unpacking libexception-class-perl (1.45-1) ... Selecting previously unselected package libiterator-perl. Preparing to unpack .../30-libiterator-perl_0.03+ds1-1.1_all.deb ... Unpacking libiterator-perl (0.03+ds1-1.1) ... Selecting previously unselected package libiterator-util-perl. Preparing to unpack .../31-libiterator-util-perl_0.02+ds1-1.1_all.deb ... Unpacking libiterator-util-perl (0.02+ds1-1.1) ... Selecting previously unselected package libexporter-tiny-perl. Preparing to unpack .../32-libexporter-tiny-perl_1.002002-1_all.deb ... Unpacking libexporter-tiny-perl (1.002002-1) ... Selecting previously unselected package liblist-moreutils-xs-perl. Preparing to unpack .../33-liblist-moreutils-xs-perl_0.430-2_amd64.deb ... Unpacking liblist-moreutils-xs-perl (0.430-2) ... Selecting previously unselected package liblist-moreutils-perl. Preparing to unpack .../34-liblist-moreutils-perl_0.430-2_all.deb ... Unpacking liblist-moreutils-perl (0.430-2) ... Selecting previously unselected package libdata-dpath-perl. Preparing to unpack .../35-libdata-dpath-perl_0.58-1_all.deb ... Unpacking libdata-dpath-perl (0.58-1) ... Selecting previously unselected package libdata-messagepack-perl. Preparing to unpack .../36-libdata-messagepack-perl_1.01-2_amd64.deb ... Unpacking libdata-messagepack-perl (1.01-2) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../37-libnet-domain-tld-perl_1.75-1.1_all.deb ... Unpacking libnet-domain-tld-perl (1.75-1.1) ... Selecting previously unselected package libdata-validate-domain-perl. Preparing to unpack .../38-libdata-validate-domain-perl_0.10-1.1_all.deb ... Unpacking libdata-validate-domain-perl (0.10-1.1) ... Selecting previously unselected package libdevel-size-perl. Preparing to unpack .../39-libdevel-size-perl_0.83-1+b2_amd64.deb ... Unpacking libdevel-size-perl (0.83-1+b2) ... Selecting previously unselected package libemail-address-xs-perl. Preparing to unpack .../40-libemail-address-xs-perl_1.04-1+b3_amd64.deb ... Unpacking libemail-address-xs-perl (1.04-1+b3) ... Selecting previously unselected package libipc-system-simple-perl. Preparing to unpack .../41-libipc-system-simple-perl_1.30-1_all.deb ... Unpacking libipc-system-simple-perl (1.30-1) ... Selecting previously unselected package libfile-basedir-perl. Preparing to unpack .../42-libfile-basedir-perl_0.09-1_all.deb ... Unpacking libfile-basedir-perl (0.09-1) ... Selecting previously unselected package libnumber-compare-perl. Preparing to unpack .../43-libnumber-compare-perl_0.03-1.1_all.deb ... Unpacking libnumber-compare-perl (0.03-1.1) ... Selecting previously unselected package libtext-glob-perl. Preparing to unpack .../44-libtext-glob-perl_0.11-1_all.deb ... Unpacking libtext-glob-perl (0.11-1) ... Selecting previously unselected package libfile-find-rule-perl. Preparing to unpack .../45-libfile-find-rule-perl_0.34-1_all.deb ... Unpacking libfile-find-rule-perl (0.34-1) ... Selecting previously unselected package libfont-ttf-perl. Preparing to unpack .../46-libfont-ttf-perl_1.06-1.1_all.deb ... Unpacking libfont-ttf-perl (1.06-1.1) ... Selecting previously unselected package libhtml-html5-entities-perl. Preparing to unpack .../47-libhtml-html5-entities-perl_0.004-1.1_all.deb ... Unpacking libhtml-html5-entities-perl (0.004-1.1) ... Selecting previously unselected package libimport-into-perl. Preparing to unpack .../48-libimport-into-perl_1.002005-1_all.deb ... Unpacking libimport-into-perl (1.002005-1) ... Selecting previously unselected package libio-interactive-perl. Preparing to unpack .../49-libio-interactive-perl_1.023-1_all.deb ... Unpacking libio-interactive-perl (1.023-1) ... Selecting previously unselected package libio-prompt-tiny-perl. Preparing to unpack .../50-libio-prompt-tiny-perl_0.003-1_all.deb ... Unpacking libio-prompt-tiny-perl (0.003-1) ... Selecting previously unselected package libipc-run3-perl. Preparing to unpack .../51-libipc-run3-perl_0.048-2_all.deb ... Unpacking libipc-run3-perl (0.048-2) ... Selecting previously unselected package libjson-maybexs-perl. Preparing to unpack .../52-libjson-maybexs-perl_1.004003-1_all.deb ... Unpacking libjson-maybexs-perl (1.004003-1) ... Selecting previously unselected package liblist-compare-perl. Preparing to unpack .../53-liblist-compare-perl_0.55-1_all.deb ... Unpacking liblist-compare-perl (0.55-1) ... Selecting previously unselected package liblist-someutils-perl. 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I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 38428 Build-Time: 92 Distribution: unstable Foreign Architectures: armhf Host Architecture: armhf Install-Time: 40 Job: libseqlib_1.2.0+dfsg-6 Lintian: pass Machine Architecture: amd64 Package: libseqlib Package-Time: 145 Source-Version: 1.2.0+dfsg-6 Space: 38428 Status: successful Version: 1.2.0+dfsg-6 -------------------------------------------------------------------------------- Finished at 2021-09-30T06:00:31Z Build needed 00:02:25, 38428k disk space