sbuild (Debian sbuild) 0.85.0 (04 January 2023) on mjolnir.einval.org +==============================================================================+ | libseqlib 1.2.0+dfsg-9 (i386) Fri, 28 Apr 2023 22:20:16 +0000 | +==============================================================================+ Package: libseqlib Version: 1.2.0+dfsg-9 Source Version: 1.2.0+dfsg-9 Distribution: unstable Machine Architecture: arm64 Host Architecture: i386 Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Unpacking /home/helmut/.cache/sbuild/unstable-arm64-sbuild.tar.zst to /tmp/tmp.sbuild.nS0vU5WOAN... I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<>' I: NOTICE: Log filtering will replace 'build/libseqlib-gXmJaF/resolver-7NyQPA' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://mirror.einval.org/debian unstable InRelease [188 kB] Get:2 http://mirror.einval.org/debian unstable/main Sources [10.1 MB] Get:3 http://mirror.einval.org/debian unstable/main i386 Packages [9315 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 Packages [9291 kB] Fetched 28.9 MB in 8s (3801 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: bash libdebconfclient0 linux-libc-dev 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 3202 kB of archives. After this operation, 17.4 kB of additional disk space will be used. Get:1 http://mirror.einval.org/debian unstable/main arm64 bash arm64 5.2.15-2+b2 [1444 kB] Get:2 http://mirror.einval.org/debian unstable/main arm64 libdebconfclient0 arm64 0.269 [9228 B] Get:3 http://mirror.einval.org/debian unstable/main arm64 linux-libc-dev arm64 6.1.25-1 [1749 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 3202 kB in 0s (49.0 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10360 files and directories currently installed.) Preparing to unpack .../bash_5.2.15-2+b2_arm64.deb ... Unpacking bash (5.2.15-2+b2) over (5.2.15-2+b1) ... Setting up bash (5.2.15-2+b2) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10360 files and directories currently installed.) Preparing to unpack .../linux-libc-dev_6.1.25-1_arm64.deb ... Unpacking linux-libc-dev:arm64 (6.1.25-1) over (6.1.20-2) ... Setting up linux-libc-dev:arm64 (6.1.25-1) ... Processing triggers for libc-bin (2.36-9) ... Processing triggers for debianutils (5.7-0.4) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'libseqlib' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libseqlib.git Please use: git clone https://salsa.debian.org/med-team/libseqlib.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 167 kB of source archives. Get:1 http://mirror.einval.org/debian unstable/main libseqlib 1.2.0+dfsg-9 (dsc) [2396 B] Get:2 http://mirror.einval.org/debian unstable/main libseqlib 1.2.0+dfsg-9 (tar) [149 kB] Get:3 http://mirror.einval.org/debian unstable/main libseqlib 1.2.0+dfsg-9 (diff) [15.1 kB] Fetched 167 kB in 0s (3307 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/libseqlib-gXmJaF/libseqlib-1.2.0+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/libseqlib-gXmJaF' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, pkg-kde-tools, libhts-dev, libcurl4-gnutls-dev | libcurl4-dev, zlib1g-dev, libfml-dev (>= 0.1+git20190320.b499514), libbwa-dev, libjsoncpp-dev, libssw-dev, libbz2-dev, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-i386:arm64, libc-dev:i386, libstdc++-dev:i386 Filtered Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, pkg-kde-tools, libhts-dev, libcurl4-gnutls-dev, zlib1g-dev, libfml-dev (>= 0.1+git20190320.b499514), libbwa-dev, libjsoncpp-dev, libssw-dev, libbz2-dev, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-i386:arm64, libc-dev:i386, libstdc++-dev:i386 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [901 B] Get:5 copy:/<>/apt_archive ./ Packages [929 B] Fetched 2439 B in 0s (125 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-i686-linux-gnu bsdextrautils cpp-12-i686-linux-gnu cpp-i686-linux-gnu cross-config crossbuild-essential-i386 d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-12-i686-linux-gnu g++-i686-linux-gnu gcc-12-base:i386 gcc-12-cross-base gcc-12-i686-linux-gnu gcc-12-i686-linux-gnu-base gcc-i686-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan8:i386 libasan8-i386-cross libatomic1:i386 libatomic1-i386-cross libbrotli1:i386 libbwa-dev:i386 libbz2-1.0:i386 libbz2-dev:i386 libc6:i386 libc6-dev:i386 libc6-dev-i386-cross libc6-i386-cross libcom-err2:i386 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:i386 libcrypt1:i386 libcurl3-gnutls:i386 libcurl4-gnutls-dev:i386 libdb5.3:i386 libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:i386 libdeflate0:i386 libelf1 libexpat1 libfakeroot libffi8:i386 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfml-dev:i386 libfml0:i386 libgcc-12-dev:i386 libgcc-12-dev-i386-cross libgcc-s1:i386 libgcc-s1-i386-cross libgmp10:i386 libgnutls30:i386 libgomp1:i386 libgomp1-i386-cross libgssapi-krb5-2:i386 libhogweed6:i386 libhts-dev:i386 libhts3:i386 libhtscodecs2:i386 libicu72 libidn2-0:i386 libio-string-perl libitm1:i386 libitm1-i386-cross libjsoncpp-dev:i386 libjsoncpp25:i386 libk5crypto3:i386 libkeyutils1:i386 libkrb5-3:i386 libkrb5support0:i386 libldap-2.5-0:i386 liblocale-gettext-perl liblzma-dev:i386 liblzma5:i386 libmagic-mgc libmagic1 libncursesw6 libnettle8:i386 libnghttp2-14:i386 libnsl-dev:i386 libnsl2:i386 libp11-kit0:i386 libpipeline1 libpkgconf3 libpsl5:i386 libpython3-stdlib libpython3.11-minimal libpython3.11-stdlib libquadmath0:i386 libquadmath0-i386-cross libreadline8 librtmp1:i386 libsasl2-2:i386 libsasl2-modules-db:i386 libsqlite3-0 libssh2-1:i386 libssl3:i386 libssw-dev:i386 libssw0:i386 libstdc++-12-dev:i386 libstdc++-12-dev-i386-cross libstdc++6:i386 libstdc++6-i386-cross libsub-override-perl libtasn1-6:i386 libtirpc-dev:i386 libtirpc3:i386 libtool libubsan1:i386 libubsan1-i386-cross libuchardet0 libunistring2:i386 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:i386 linux-libc-dev:i386 linux-libc-dev-i386-cross m4 man-db media-types pkg-config:i386 pkg-kde-tools pkgconf:i386 pkgconf-bin po-debconf python3 python3-minimal python3.11 python3.11-minimal readline-common sensible-utils ucf zlib1g:i386 zlib1g-dev:i386 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-12-locales cpp-12-doc cpp-doc dh-make binutils-multiarch g++-12-multilib-i686-linux-gnu gcc-12-doc gcc-12-multilib-i686-linux-gnu manpages-dev flex bison gdb-i686-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff samtools:i386 glibc-doc:i386 libc-l10n:i386 locales:i386 libnss-nis:i386 libnss-nisplus:i386 manpages-dev:i386 libcurl4-doc:i386 libgnutls28-dev:i386 libidn-dev:i386 libkrb5-dev:i386 libldap2-dev:i386 librtmp-dev:i386 libssh2-1-dev:i386 gnutls-bin:i386 krb5-doc:i386 krb5-user:i386 liblzma-doc:i386 libstdc++-12-doc:i386 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser cdbs libmail-box-perl python3-doc python3-tk python3-venv python3.11-venv python3.11-doc binfmt-support readline-doc Recommended packages: curl | wget | lynx bzip2-doc:i386 ca-certificates:i386 libarchive-cpio-perl krb5-locales:i386 libldap-common:i386 libgpm2 publicsuffix:i386 libsasl2-modules:i386 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl ca-certificates The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-i686-linux-gnu bsdextrautils cpp-12-i686-linux-gnu cpp-i686-linux-gnu cross-config crossbuild-essential-i386 d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-12-i686-linux-gnu g++-i686-linux-gnu gcc-12-base:i386 gcc-12-cross-base gcc-12-i686-linux-gnu gcc-12-i686-linux-gnu-base gcc-i686-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan8:i386 libasan8-i386-cross libatomic1:i386 libatomic1-i386-cross libbrotli1:i386 libbwa-dev:i386 libbz2-1.0:i386 libbz2-dev:i386 libc6:i386 libc6-dev:i386 libc6-dev-i386-cross libc6-i386-cross libcom-err2:i386 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:i386 libcrypt1:i386 libcurl3-gnutls:i386 libcurl4-gnutls-dev:i386 libdb5.3:i386 libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:i386 libdeflate0:i386 libelf1 libexpat1 libfakeroot libffi8:i386 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfml-dev:i386 libfml0:i386 libgcc-12-dev:i386 libgcc-12-dev-i386-cross libgcc-s1:i386 libgcc-s1-i386-cross libgmp10:i386 libgnutls30:i386 libgomp1:i386 libgomp1-i386-cross libgssapi-krb5-2:i386 libhogweed6:i386 libhts-dev:i386 libhts3:i386 libhtscodecs2:i386 libicu72 libidn2-0:i386 libio-string-perl libitm1:i386 libitm1-i386-cross libjsoncpp-dev:i386 libjsoncpp25:i386 libk5crypto3:i386 libkeyutils1:i386 libkrb5-3:i386 libkrb5support0:i386 libldap-2.5-0:i386 liblocale-gettext-perl liblzma-dev:i386 liblzma5:i386 libmagic-mgc libmagic1 libncursesw6 libnettle8:i386 libnghttp2-14:i386 libnsl-dev:i386 libnsl2:i386 libp11-kit0:i386 libpipeline1 libpkgconf3 libpsl5:i386 libpython3-stdlib libpython3.11-minimal libpython3.11-stdlib libquadmath0:i386 libquadmath0-i386-cross libreadline8 librtmp1:i386 libsasl2-2:i386 libsasl2-modules-db:i386 libsqlite3-0 libssh2-1:i386 libssl3:i386 libssw-dev:i386 libssw0:i386 libstdc++-12-dev:i386 libstdc++-12-dev-i386-cross libstdc++6:i386 libstdc++6-i386-cross libsub-override-perl libtasn1-6:i386 libtirpc-dev:i386 libtirpc3:i386 libtool libubsan1:i386 libubsan1-i386-cross libuchardet0 libunistring2:i386 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:i386 linux-libc-dev:i386 linux-libc-dev-i386-cross m4 man-db media-types pkg-config:i386 pkg-kde-tools pkgconf:i386 pkgconf-bin po-debconf python3 python3-minimal python3.11 python3.11-minimal readline-common sbuild-build-depends-main-dummy:i386 sensible-utils ucf zlib1g:i386 zlib1g-dev:i386 0 upgraded, 157 newly installed, 0 to remove and 0 not upgraded. Need to get 106 MB of archives. After this operation, 415 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1008 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 liblocale-gettext-perl arm64 1.07-5 [15.1 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 libpython3.11-minimal arm64 3.11.2-6 [806 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 libexpat1 arm64 2.5.0-1 [84.8 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 python3.11-minimal arm64 3.11.2-6 [1858 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 python3-minimal arm64 3.11.2-1+b1 [26.3 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 media-types all 10.0.0 [26.1 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 libncursesw6 arm64 6.4-2 [122 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 readline-common all 8.2-1.3 [69.0 kB] Get:10 http://mirror.einval.org/debian unstable/main arm64 libreadline8 arm64 8.2-1.3 [155 kB] Get:11 http://mirror.einval.org/debian unstable/main arm64 libsqlite3-0 arm64 3.40.1-2 [786 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 libpython3.11-stdlib arm64 3.11.2-6 [1747 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 python3.11 arm64 3.11.2-6 [572 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 libpython3-stdlib arm64 3.11.2-1+b1 [9296 B] Get:15 http://mirror.einval.org/debian unstable/main arm64 python3 arm64 3.11.2-1+b1 [26.3 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get:17 http://mirror.einval.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.44-3 [305 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 libmagic1 arm64 1:5.44-3 [98.5 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 file arm64 1:5.44-3 [42.5 kB] Get:20 http://mirror.einval.org/debian unstable/main arm64 gettext-base arm64 0.21-12 [159 kB] Get:21 http://mirror.einval.org/debian unstable/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get:22 http://mirror.einval.org/debian unstable/main arm64 groff-base arm64 1.22.4-10 [861 kB] Get:23 http://mirror.einval.org/debian unstable/main arm64 bsdextrautils arm64 2.38.1-5+b1 [86.9 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 libpipeline1 arm64 1.5.7-1 [36.4 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 man-db arm64 2.11.2-2 [1369 kB] Get:26 http://mirror.einval.org/debian unstable/main arm64 ucf all 3.0043+nmu1 [55.2 kB] Get:27 http://mirror.einval.org/debian unstable/main arm64 m4 arm64 1.4.19-3 [276 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 autoconf all 2.71-3 [332 kB] Get:29 http://mirror.einval.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get:30 http://mirror.einval.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 autopoint all 0.21-12 [495 kB] Get:32 http://mirror.einval.org/debian unstable/main arm64 gcc-12-i686-linux-gnu-base arm64 12.2.0-14cross1 [37.7 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 cpp-12-i686-linux-gnu arm64 12.2.0-14cross1 [8762 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 cpp-i686-linux-gnu arm64 4:12.2.0-3 [3968 B] Get:35 http://mirror.einval.org/debian unstable/main arm64 cross-config all 2.6.20 [16.3 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 binutils-i686-linux-gnu arm64 2.40-2 [2362 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 gcc-12-cross-base all 12.2.0-14cross1 [33.2 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 libc6-i386-cross all 2.36-8cross1 [1340 kB] Get:39 http://mirror.einval.org/debian unstable/main arm64 libgcc-s1-i386-cross all 12.2.0-14cross1 [59.6 kB] Get:40 http://mirror.einval.org/debian unstable/main arm64 libgomp1-i386-cross all 12.2.0-14cross1 [118 kB] Get:41 http://mirror.einval.org/debian unstable/main arm64 libitm1-i386-cross all 12.2.0-14cross1 [27.1 kB] Get:42 http://mirror.einval.org/debian unstable/main arm64 libatomic1-i386-cross all 12.2.0-14cross1 [7472 B] Get:43 http://mirror.einval.org/debian unstable/main arm64 libasan8-i386-cross all 12.2.0-14cross1 [2080 kB] Get:44 http://mirror.einval.org/debian unstable/main arm64 libstdc++6-i386-cross all 12.2.0-14cross1 [618 kB] Get:45 http://mirror.einval.org/debian unstable/main arm64 libubsan1-i386-cross all 12.2.0-14cross1 [870 kB] Get:46 http://mirror.einval.org/debian unstable/main arm64 libquadmath0-i386-cross all 12.2.0-14cross1 [227 kB] Get:47 http://mirror.einval.org/debian unstable/main arm64 libgcc-12-dev-i386-cross all 12.2.0-14cross1 [2428 kB] Get:48 http://mirror.einval.org/debian unstable/main arm64 gcc-12-i686-linux-gnu arm64 12.2.0-14cross1 [17.4 MB] Get:49 http://mirror.einval.org/debian unstable/main arm64 gcc-i686-linux-gnu arm64 4:12.2.0-3 [1464 B] Get:50 http://mirror.einval.org/debian unstable/main arm64 linux-libc-dev-i386-cross all 6.1.4-1cross1 [1839 kB] Get:51 http://mirror.einval.org/debian unstable/main arm64 libc6-dev-i386-cross all 2.36-8cross1 [1715 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 libstdc++-12-dev-i386-cross all 12.2.0-14cross1 [2084 kB] Get:53 http://mirror.einval.org/debian unstable/main arm64 g++-12-i686-linux-gnu arm64 12.2.0-14cross1 [9598 kB] Get:54 http://mirror.einval.org/debian unstable/main arm64 g++-i686-linux-gnu arm64 4:12.2.0-3 [1172 B] Get:55 http://mirror.einval.org/debian unstable/main arm64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 libio-string-perl all 1.08-4 [12.1 kB] Get:57 http://mirror.einval.org/debian unstable/main arm64 libicu72 arm64 72.1-3 [9204 kB] Get:58 http://mirror.einval.org/debian unstable/main arm64 libxml2 arm64 2.9.14+dfsg-1.2 [620 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:61 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:62 http://mirror.einval.org/debian unstable/main arm64 libxml-libxml-perl arm64 2.0207+dfsg+really+2.0134-1+b1 [309 kB] Get:63 http://mirror.einval.org/debian unstable/main arm64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:64 http://mirror.einval.org/debian unstable/main arm64 libyaml-perl all 1.30-2 [63.4 kB] Get:65 http://mirror.einval.org/debian unstable/main arm64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:66 http://mirror.einval.org/debian unstable/main arm64 libfile-which-perl all 1.27-2 [15.1 kB] Get:67 http://mirror.einval.org/debian unstable/main arm64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:68 http://mirror.einval.org/debian unstable/main arm64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:69 http://mirror.einval.org/debian unstable/main arm64 dpkg-cross all 2.6.20 [25.8 kB] Get:70 http://mirror.einval.org/debian unstable/main arm64 crossbuild-essential-i386 all 12.9 [6704 B] Get:71 http://mirror.einval.org/debian unstable/main arm64 d-shlibs all 0.104 [18.6 kB] Get:72 http://mirror.einval.org/debian unstable/main arm64 libdebhelper-perl all 13.11.4 [81.2 kB] Get:73 http://mirror.einval.org/debian unstable/main arm64 libtool all 2.4.7-5 [517 kB] Get:74 http://mirror.einval.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get:75 http://mirror.einval.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get:76 http://mirror.einval.org/debian unstable/main arm64 libsub-override-perl all 0.09-4 [9304 B] Get:77 http://mirror.einval.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:78 http://mirror.einval.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:79 http://mirror.einval.org/debian unstable/main arm64 libelf1 arm64 0.188-2.1 [173 kB] Get:80 http://mirror.einval.org/debian unstable/main arm64 dwz arm64 0.15-1 [101 kB] Get:81 http://mirror.einval.org/debian unstable/main arm64 gettext arm64 0.21-12 [1248 kB] Get:82 http://mirror.einval.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:83 http://mirror.einval.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get:84 http://mirror.einval.org/debian unstable/main arm64 debhelper all 13.11.4 [942 kB] Get:85 http://mirror.einval.org/debian unstable/main arm64 libfakeroot arm64 1.31-1.2 [27.9 kB] Get:86 http://mirror.einval.org/debian unstable/main arm64 fakeroot arm64 1.31-1.2 [66.4 kB] Get:87 http://mirror.einval.org/debian unstable/main i386 gcc-12-base i386 12.2.0-14 [37.5 kB] Get:88 http://mirror.einval.org/debian unstable/main i386 libgcc-s1 i386 12.2.0-14 [59.5 kB] Get:89 http://mirror.einval.org/debian unstable/main i386 libc6 i386 2.36-9 [2626 kB] Get:90 http://mirror.einval.org/debian unstable/main i386 libasan8 i386 12.2.0-14 [2079 kB] Get:91 http://mirror.einval.org/debian unstable/main i386 libatomic1 i386 12.2.0-14 [7692 B] Get:92 http://mirror.einval.org/debian unstable/main i386 libbrotli1 i386 1.0.9-2+b6 [275 kB] Get:93 http://mirror.einval.org/debian unstable/main i386 libbwa-dev i386 0.7.17-7+b2 [172 kB] Get:94 http://mirror.einval.org/debian unstable/main i386 libbz2-1.0 i386 1.0.8-5+b1 [47.1 kB] Get:95 http://mirror.einval.org/debian unstable/main i386 linux-libc-dev i386 6.1.25-1 [1773 kB] Get:96 http://mirror.einval.org/debian unstable/main i386 libcrypt1 i386 1:4.4.33-2 [95.6 kB] Get:97 http://mirror.einval.org/debian unstable/main i386 libcrypt-dev i386 1:4.4.33-2 [126 kB] Get:98 http://mirror.einval.org/debian unstable/main i386 libcom-err2 i386 1.47.0-2 [20.1 kB] Get:99 http://mirror.einval.org/debian unstable/main i386 libkrb5support0 i386 1.20.1-1+b1 [35.3 kB] Get:100 http://mirror.einval.org/debian unstable/main i386 libk5crypto3 i386 1.20.1-1+b1 [82.4 kB] Get:101 http://mirror.einval.org/debian unstable/main i386 libkeyutils1 i386 1.6.3-2 [9284 B] Get:102 http://mirror.einval.org/debian unstable/main i386 libssl3 i386 3.0.8-1 [2018 kB] Get:103 http://mirror.einval.org/debian unstable/main i386 libkrb5-3 i386 1.20.1-1+b1 [359 kB] Get:104 http://mirror.einval.org/debian unstable/main i386 libgssapi-krb5-2 i386 1.20.1-1+b1 [144 kB] Get:105 http://mirror.einval.org/debian unstable/main i386 libtirpc3 i386 1.3.3+ds-1 [92.6 kB] Get:106 http://mirror.einval.org/debian unstable/main i386 libnsl2 i386 1.3.0-2 [42.2 kB] Get:107 http://mirror.einval.org/debian unstable/main i386 libtirpc-dev i386 1.3.3+ds-1 [202 kB] Get:108 http://mirror.einval.org/debian unstable/main i386 libnsl-dev i386 1.3.0-2 [70.6 kB] Get:109 http://mirror.einval.org/debian unstable/main i386 libc6-dev i386 2.36-9 [1718 kB] Get:110 http://mirror.einval.org/debian unstable/main i386 libbz2-dev i386 1.0.8-5+b1 [31.5 kB] Get:111 http://mirror.einval.org/debian unstable/main i386 libgmp10 i386 2:6.2.1+dfsg1-1.1 [574 kB] Get:112 http://mirror.einval.org/debian unstable/main i386 libnettle8 i386 3.8.1-2 [301 kB] Get:113 http://mirror.einval.org/debian unstable/main i386 libhogweed6 i386 3.8.1-2 [331 kB] Get:114 http://mirror.einval.org/debian unstable/main i386 libunistring2 i386 1.0-2 [435 kB] Get:115 http://mirror.einval.org/debian unstable/main i386 libidn2-0 i386 2.3.3-1+b1 [126 kB] Get:116 http://mirror.einval.org/debian unstable/main i386 libffi8 i386 3.4.4-1 [21.1 kB] Get:117 http://mirror.einval.org/debian unstable/main i386 libp11-kit0 i386 0.24.1-2 [335 kB] Get:118 http://mirror.einval.org/debian unstable/main i386 libtasn1-6 i386 4.19.0-2 [58.4 kB] Get:119 http://mirror.einval.org/debian unstable/main i386 libgnutls30 i386 3.7.9-2 [1404 kB] Get:120 http://mirror.einval.org/debian unstable/main i386 libdb5.3 i386 5.3.28+dfsg2-1 [759 kB] Get:121 http://mirror.einval.org/debian unstable/main i386 libsasl2-modules-db i386 2.1.28+dfsg-11 [21.1 kB] Get:122 http://mirror.einval.org/debian unstable/main i386 libsasl2-2 i386 2.1.28+dfsg-11 [62.5 kB] Get:123 http://mirror.einval.org/debian unstable/main i386 libldap-2.5-0 i386 2.5.13+dfsg-5 [196 kB] Get:124 http://mirror.einval.org/debian unstable/main i386 libnghttp2-14 i386 1.52.0-1 [79.8 kB] Get:125 http://mirror.einval.org/debian unstable/main i386 libpsl5 i386 0.21.2-1 [59.3 kB] Get:126 http://mirror.einval.org/debian unstable/main i386 zlib1g i386 1:1.2.13.dfsg-1 [82.6 kB] Get:127 http://mirror.einval.org/debian unstable/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB] Get:128 http://mirror.einval.org/debian unstable/main i386 libssh2-1 i386 1.10.0-3+b1 [187 kB] Get:129 http://mirror.einval.org/debian unstable/main i386 libzstd1 i386 1.5.4+dfsg2-5 [274 kB] Get:130 http://mirror.einval.org/debian unstable/main i386 libcurl3-gnutls i386 7.88.1-9 [412 kB] Get:131 http://mirror.einval.org/debian unstable/main i386 libcurl4-gnutls-dev i386 7.88.1-9 [527 kB] Get:132 http://mirror.einval.org/debian unstable/main i386 libdeflate0 i386 1.14-1 [57.5 kB] Get:133 http://mirror.einval.org/debian unstable/main i386 libdeflate-dev i386 1.14-1 [53.5 kB] Get:134 http://mirror.einval.org/debian unstable/main i386 libfml0 i386 0.1+git20190320.b499514-1+b1 [88.3 kB] Get:135 http://mirror.einval.org/debian unstable/main i386 zlib1g-dev i386 1:1.2.13.dfsg-1 [913 kB] Get:136 http://mirror.einval.org/debian unstable/main i386 libfml-dev i386 0.1+git20190320.b499514-1+b1 [100 kB] Get:137 http://mirror.einval.org/debian unstable/main i386 libgomp1 i386 12.2.0-14 [121 kB] Get:138 http://mirror.einval.org/debian unstable/main i386 libitm1 i386 12.2.0-14 [27.6 kB] Get:139 http://mirror.einval.org/debian unstable/main i386 libstdc++6 i386 12.2.0-14 [661 kB] Get:140 http://mirror.einval.org/debian unstable/main i386 libubsan1 i386 12.2.0-14 [870 kB] Get:141 http://mirror.einval.org/debian unstable/main i386 libquadmath0 i386 12.2.0-14 [226 kB] Get:142 http://mirror.einval.org/debian unstable/main i386 libgcc-12-dev i386 12.2.0-14 [2432 kB] Get:143 http://mirror.einval.org/debian unstable/main i386 libhtscodecs2 i386 1.3.0-4 [67.4 kB] Get:144 http://mirror.einval.org/debian unstable/main i386 liblzma5 i386 5.4.1-0.2 [215 kB] Get:145 http://mirror.einval.org/debian unstable/main i386 libhts3 i386 1.16+ds-3 [469 kB] Get:146 http://mirror.einval.org/debian unstable/main i386 liblzma-dev i386 5.4.1-0.2 [272 kB] Get:147 http://mirror.einval.org/debian unstable/main i386 libhts-dev i386 1.16+ds-3 [1585 kB] Get:148 http://mirror.einval.org/debian unstable/main i386 libjsoncpp25 i386 1.9.5-4 [86.2 kB] Get:149 http://mirror.einval.org/debian unstable/main i386 libjsoncpp-dev i386 1.9.5-4 [26.4 kB] Get:150 http://mirror.einval.org/debian unstable/main arm64 libpkgconf3 arm64 1.8.1-1 [35.3 kB] Get:151 http://mirror.einval.org/debian unstable/main i386 libssw0 i386 1.1-13 [27.1 kB] Get:152 http://mirror.einval.org/debian unstable/main i386 libssw-dev i386 1.1-13 [30.2 kB] Get:153 http://mirror.einval.org/debian unstable/main i386 libstdc++-12-dev i386 12.2.0-14 [2101 kB] Get:154 http://mirror.einval.org/debian unstable/main arm64 pkgconf-bin arm64 1.8.1-1 [28.9 kB] Get:155 http://mirror.einval.org/debian unstable/main i386 pkgconf i386 1.8.1-1 [25.9 kB] Get:156 http://mirror.einval.org/debian unstable/main i386 pkg-config i386 1.8.1-1 [13.7 kB] Get:157 http://mirror.einval.org/debian unstable/main arm64 pkg-kde-tools all 0.15.38 [97.8 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 106 MB in 1s (80.0 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 10360 files and directories currently installed.) Preparing to unpack .../liblocale-gettext-perl_1.07-5_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-5) ... Selecting previously unselected package libpython3.11-minimal:arm64. Preparing to unpack .../libpython3.11-minimal_3.11.2-6_arm64.deb ... Unpacking libpython3.11-minimal:arm64 (3.11.2-6) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../libexpat1_2.5.0-1_arm64.deb ... Unpacking libexpat1:arm64 (2.5.0-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.2-6_arm64.deb ... Unpacking python3.11-minimal (3.11.2-6) ... Setting up libpython3.11-minimal:arm64 (3.11.2-6) ... Setting up libexpat1:arm64 (2.5.0-1) ... Setting up python3.11-minimal (3.11.2-6) ... Selecting previously unselected package python3-minimal. (Reading database ... 10690 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.2-1+b1_arm64.deb ... Unpacking python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.0.0_all.deb ... Unpacking media-types (10.0.0) ... Selecting previously unselected package libncursesw6:arm64. Preparing to unpack .../2-libncursesw6_6.4-2_arm64.deb ... Unpacking libncursesw6:arm64 (6.4-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../3-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package libreadline8:arm64. Preparing to unpack .../4-libreadline8_8.2-1.3_arm64.deb ... Unpacking libreadline8:arm64 (8.2-1.3) ... Selecting previously unselected package libsqlite3-0:arm64. Preparing to unpack .../5-libsqlite3-0_3.40.1-2_arm64.deb ... Unpacking libsqlite3-0:arm64 (3.40.1-2) ... Selecting previously unselected package libpython3.11-stdlib:arm64. 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Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../009-libpipeline1_1.5.7-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../010-man-db_2.11.2-2_arm64.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package ucf. Preparing to unpack .../011-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package m4. Preparing to unpack .../012-m4_1.4.19-3_arm64.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../013-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../014-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. 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Selecting previously unselected package binutils-i686-linux-gnu. Preparing to unpack .../021-binutils-i686-linux-gnu_2.40-2_arm64.deb ... Unpacking binutils-i686-linux-gnu (2.40-2) ... Selecting previously unselected package gcc-12-cross-base. Preparing to unpack .../022-gcc-12-cross-base_12.2.0-14cross1_all.deb ... Unpacking gcc-12-cross-base (12.2.0-14cross1) ... Selecting previously unselected package libc6-i386-cross. Preparing to unpack .../023-libc6-i386-cross_2.36-8cross1_all.deb ... Unpacking libc6-i386-cross (2.36-8cross1) ... Selecting previously unselected package libgcc-s1-i386-cross. Preparing to unpack .../024-libgcc-s1-i386-cross_12.2.0-14cross1_all.deb ... Unpacking libgcc-s1-i386-cross (12.2.0-14cross1) ... Selecting previously unselected package libgomp1-i386-cross. Preparing to unpack .../025-libgomp1-i386-cross_12.2.0-14cross1_all.deb ... Unpacking libgomp1-i386-cross (12.2.0-14cross1) ... Selecting previously unselected package libitm1-i386-cross. Preparing to unpack .../026-libitm1-i386-cross_12.2.0-14cross1_all.deb ... Unpacking libitm1-i386-cross (12.2.0-14cross1) ... Selecting previously unselected package libatomic1-i386-cross. Preparing to unpack .../027-libatomic1-i386-cross_12.2.0-14cross1_all.deb ... Unpacking libatomic1-i386-cross (12.2.0-14cross1) ... Selecting previously unselected package libasan8-i386-cross. Preparing to unpack .../028-libasan8-i386-cross_12.2.0-14cross1_all.deb ... Unpacking libasan8-i386-cross (12.2.0-14cross1) ... Selecting previously unselected package libstdc++6-i386-cross. Preparing to unpack .../029-libstdc++6-i386-cross_12.2.0-14cross1_all.deb ... Unpacking libstdc++6-i386-cross (12.2.0-14cross1) ... Selecting previously unselected package libubsan1-i386-cross. Preparing to unpack .../030-libubsan1-i386-cross_12.2.0-14cross1_all.deb ... Unpacking libubsan1-i386-cross (12.2.0-14cross1) ... Selecting previously unselected package libquadmath0-i386-cross. Preparing to unpack .../031-libquadmath0-i386-cross_12.2.0-14cross1_all.deb ... Unpacking libquadmath0-i386-cross (12.2.0-14cross1) ... Selecting previously unselected package libgcc-12-dev-i386-cross. Preparing to unpack .../032-libgcc-12-dev-i386-cross_12.2.0-14cross1_all.deb ... Unpacking libgcc-12-dev-i386-cross (12.2.0-14cross1) ... Selecting previously unselected package gcc-12-i686-linux-gnu. Preparing to unpack .../033-gcc-12-i686-linux-gnu_12.2.0-14cross1_arm64.deb ... Unpacking gcc-12-i686-linux-gnu (12.2.0-14cross1) ... Selecting previously unselected package gcc-i686-linux-gnu. Preparing to unpack .../034-gcc-i686-linux-gnu_4%3a12.2.0-3_arm64.deb ... Unpacking gcc-i686-linux-gnu (4:12.2.0-3) ... Selecting previously unselected package linux-libc-dev-i386-cross. Preparing to unpack .../035-linux-libc-dev-i386-cross_6.1.4-1cross1_all.deb ... Unpacking linux-libc-dev-i386-cross (6.1.4-1cross1) ... Selecting previously unselected package libc6-dev-i386-cross. 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Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up file (1:5.44-3) ... Setting up libyaml-perl (1.30-2) ... Setting up libfakeroot:arm64 (1.31-1.2) ... Setting up gcc-12-base:i386 (12.2.0-14) ... Setting up gcc-12-i686-linux-gnu-base:arm64 (12.2.0-14cross1) ... Setting up fakeroot (1.31-1.2) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up linux-libc-dev-i386-cross (6.1.4-1cross1) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.20) ... Setting up libpkgconf3:arm64 (1.8.1-1) ... Setting up autopoint (0.21-12) ... Setting up d-shlibs (0.104) ... Setting up pkgconf-bin (1.8.1-1) ... Setting up libncursesw6:arm64 (6.4-2) ... Setting up autoconf (2.71-3) ... Setting up libbwa-dev:i386 (0.7.17-7+b2) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libc6-i386-cross (2.36-8cross1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up libquadmath0-i386-cross (12.2.0-14cross1) ... Setting up libelf1:arm64 (0.188-2.1) ... Setting up readline-common (8.2-1.3) ... Setting up libxml2:arm64 (2.9.14+dfsg-1.2) ... Setting up liblocale-gettext-perl (1.07-5) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-12) ... Setting up cpp-12-i686-linux-gnu (12.2.0-14cross1) ... Setting up libtool (2.4.7-5) ... Setting up libatomic1-i386-cross (12.2.0-14cross1) ... Setting up libreadline8:arm64 (8.2-1.3) ... Setting up libgomp1-i386-cross (12.2.0-14cross1) ... Setting up libc6-dev-i386-cross (2.36-8cross1) ... Setting up pkgconf:i386 (1.8.1-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libgcc-s1-i386-cross (12.2.0-14cross1) ... Setting up dh-autoreconf (20) ... Setting up libitm1-i386-cross (12.2.0-14cross1) ... Setting up pkg-config:i386 (1.8.1-1) ... Setting up ucf (3.0043+nmu1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up cpp-i686-linux-gnu (4:12.2.0-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:arm64 (3.11.2-6) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libasan8-i386-cross (12.2.0-14cross1) ... Setting up libstdc++6-i386-cross (12.2.0-14cross1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libpython3-stdlib:arm64 (3.11.2-1+b1) ... Setting up python3.11 (3.11.2-6) ... Setting up debhelper (13.11.4) ... Setting up python3 (3.11.2-1+b1) ... Setting up libubsan1-i386-cross (12.2.0-14cross1) ... Setting up libxml-simple-perl (2.25-2) ... Setting up pkg-kde-tools (0.15.38) ... Setting up libgcc-12-dev-i386-cross (12.2.0-14cross1) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up libstdc++-12-dev-i386-cross (12.2.0-14cross1) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up gcc-12-i686-linux-gnu (12.2.0-14cross1) ... Setting up g++-12-i686-linux-gnu (12.2.0-14cross1) ... Setting up gcc-i686-linux-gnu (4:12.2.0-3) ... Setting up dpkg-cross (2.6.20) ... Setting up g++-i686-linux-gnu (4:12.2.0-3) ... Setting up crossbuild-essential-i386 (12.9) ... Setting up libgcc-s1:i386 (12.2.0-14) ... Setting up libc6:i386 (2.36-9) ... Setting up libffi8:i386 (3.4.4-1) ... Setting up libasan8:i386 (12.2.0-14) ... Setting up libtasn1-6:i386 (4.19.0-2) ... Setting up libbz2-1.0:i386 (1.0.8-5+b1) ... Setting up libdb5.3:i386 (5.3.28+dfsg2-1) ... Setting up libstdc++6:i386 (12.2.0-14) ... Setting up libitm1:i386 (12.2.0-14) ... Setting up libhtscodecs2:i386 (1.3.0-4) ... Setting up libzstd1:i386 (1.5.4+dfsg2-5) ... Setting up libkeyutils1:i386 (1.6.3-2) ... Setting up liblzma5:i386 (5.4.1-0.2) ... Setting up libbrotli1:i386 (1.0.9-2+b6) ... Setting up libssl3:i386 (3.0.8-1) ... Setting up libnghttp2-14:i386 (1.52.0-1) ... Setting up libunistring2:i386 (1.0-2) ... Setting up libdeflate0:i386 (1.14-1) ... Setting up zlib1g:i386 (1:1.2.13.dfsg-1) ... Setting up libcrypt1:i386 (1:4.4.33-2) ... Setting up libidn2-0:i386 (2.3.3-1+b1) ... Setting up libcom-err2:i386 (1.47.0-2) ... Setting up libgomp1:i386 (12.2.0-14) ... Setting up libfml0:i386 (0.1+git20190320.b499514-1+b1) ... Setting up libkrb5support0:i386 (1.20.1-1+b1) ... Setting up libsasl2-modules-db:i386 (2.1.28+dfsg-11) ... Setting up libnettle8:i386 (3.8.1-2) ... Setting up libgmp10:i386 (2:6.2.1+dfsg1-1.1) ... Setting up libquadmath0:i386 (12.2.0-14) ... Setting up libp11-kit0:i386 (0.24.1-2) ... Setting up libatomic1:i386 (12.2.0-14) ... Setting up libjsoncpp25:i386 (1.9.5-4) ... Setting up libk5crypto3:i386 (1.20.1-1+b1) ... Setting up libsasl2-2:i386 (2.1.28+dfsg-11) ... Setting up liblzma-dev:i386 (5.4.1-0.2) ... Setting up libubsan1:i386 (12.2.0-14) ... Setting up libcrypt-dev:i386 (1:4.4.33-2) ... Setting up libssh2-1:i386 (1.10.0-3+b1) ... Setting up libkrb5-3:i386 (1.20.1-1+b1) ... Setting up libdeflate-dev:i386 (1.14-1) ... Setting up libssw0:i386 (1.1-13) ... Setting up libjsoncpp-dev:i386 (1.9.5-4) ... Setting up libpsl5:i386 (0.21.2-1) ... Setting up libhogweed6:i386 (3.8.1-2) ... Setting up libssw-dev:i386 (1.1-13) ... Setting up libgnutls30:i386 (3.7.9-2) ... Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libgcc-12-dev:i386 (12.2.0-14) ... Setting up libgssapi-krb5-2:i386 (1.20.1-1+b1) ... Setting up libtirpc3:i386 (1.3.3+ds-1) ... Setting up libldap-2.5-0:i386 (2.5.13+dfsg-5) ... Setting up libtirpc-dev:i386 (1.3.3+ds-1) ... Setting up libnsl2:i386 (1.3.0-2) ... Setting up libcurl3-gnutls:i386 (7.88.1-9) ... Setting up libcurl4-gnutls-dev:i386 (7.88.1-9) ... Setting up libnsl-dev:i386 (1.3.0-2) ... Setting up libc6-dev:i386 (2.36-9) ... Setting up libbz2-dev:i386 (1.0.8-5+b1) ... Setting up libhts3:i386 (1.16+ds-3) ... Setting up libstdc++-12-dev:i386 (12.2.0-14) ... Setting up zlib1g-dev:i386 (1:1.2.13.dfsg-1) ... Setting up libfml-dev:i386 (0.1+git20190320.b499514-1+b1) ... Setting up libhts-dev:i386 (1.16+ds-3) ... Setting up sbuild-build-depends-main-dummy:i386 (0.invalid.0) ... Processing triggers for libc-bin (2.36-9) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (i386 included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-7-arm64 #1 SMP Debian 6.1.20-1 (2023-03-19) arm64 (aarch64) Toolchain package versions: binutils_2.40-2 dpkg-dev_1.21.21 g++-12_12.2.0-14 gcc-12_12.2.0-14 libc6-dev_2.36-9 libstdc++-12-dev_12.2.0-14 libstdc++-12-dev-i386-cross_12.2.0-14cross1 libstdc++6_12.2.0-14 libstdc++6-i386-cross_12.2.0-14cross1 linux-libc-dev_6.1.25-1 Package versions: apt_2.6.0 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-12 autotools-dev_20220109.1 base-files_12.4 base-passwd_3.6.1 bash_5.2.15-2+b2 binutils_2.40-2 binutils-aarch64-linux-gnu_2.40-2 binutils-common_2.40-2 binutils-i686-linux-gnu_2.40-2 bsdextrautils_2.38.1-5+b1 bsdutils_1:2.38.1-5+b1 build-essential_12.9 bzip2_1.0.8-5+b1 coreutils_9.1-1 cpp_4:12.2.0-3 cpp-12_12.2.0-14 cpp-12-i686-linux-gnu_12.2.0-14cross1 cpp-i686-linux-gnu_4:12.2.0-3 cross-config_2.6.20 crossbuild-essential-i386_12.9 d-shlibs_0.104 dash_0.5.12-2 debconf_1.5.82 debhelper_13.11.4 debian-archive-keyring_2023.3 debianutils_5.7-0.4 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-4 dpkg_1.21.21 dpkg-cross_2.6.20 dpkg-dev_1.21.21 dwz_0.15-1 fakeroot_1.31-1.2 file_1:5.44-3 findutils_4.9.0-4 g++_4:12.2.0-3 g++-12_12.2.0-14 g++-12-i686-linux-gnu_12.2.0-14cross1 g++-i686-linux-gnu_4:12.2.0-3 gcc_4:12.2.0-3 gcc-12_12.2.0-14 gcc-12-base_12.2.0-14 gcc-12-cross-base_12.2.0-14cross1 gcc-12-i686-linux-gnu_12.2.0-14cross1 gcc-12-i686-linux-gnu-base_12.2.0-14cross1 gcc-i686-linux-gnu_4:12.2.0-3 gettext_0.21-12 gettext-base_0.21-12 gpgv_2.2.40-1.1 grep_3.8-5 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any Version: 1.2.0+dfsg-9 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Étienne Mollier Homepage: https://github.com/walaj/SeqLib Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/libseqlib Vcs-Git: https://salsa.debian.org/med-team/libseqlib.git Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, pkg-kde-tools, libhts-dev, libcurl4-gnutls-dev | libcurl4-dev, zlib1g-dev, libfml-dev (>= 0.1+git20190320.b499514), libbwa-dev, libjsoncpp-dev, libssw-dev, libbz2-dev Package-List: libseqlib-dev deb libdevel optional arch=any libseqlib2 deb libs optional arch=any Checksums-Sha1: 584cb70cc2d11d595f26ec50763d11ca570395c5 148996 libseqlib_1.2.0+dfsg.orig.tar.xz 89fbbbd8cf6d8daefa7e5b10d1d277da60e9e09f 15116 libseqlib_1.2.0+dfsg-9.debian.tar.xz Checksums-Sha256: 408ee92e5041ff45d9d259d1507ef783e74c565d02e0c623ef0a67a7c387b953 148996 libseqlib_1.2.0+dfsg.orig.tar.xz 31ffae5e373c3977c90df89fc379590093bfa97bd842e2f75762539e4b1510f8 15116 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fml_include_path.patch dpkg-source: info: applying dynamic_lib.patch dpkg-source: info: applying use_debian_packaged_jsoncpp.patch dpkg-source: info: applying use_debian_packaged_ssw.patch dpkg-source: info: applying pkg-config.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.i386 DEB_BUILD_OPTIONS=nocheck HOME=/var/lib/sbuild LANG=en_GB.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut OLDPWD=/ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/<> SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -ai386 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package libseqlib dpkg-buildpackage: info: source version 1.2.0+dfsg-9 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-architecture: warning: specified GNU system type i686-linux-gnu does not match CC system type aarch64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --with pkgkde_symbolshelper dh_clean debian/rules binary-arch dh binary-arch --with pkgkde_symbolshelper dh_update_autotools_config -a dh_autoreconf -a libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac, libtoolize: and rerunning libtoolize and aclocal. libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am. libtoolize: 'AC_PROG_RANLIB' is rendered obsolete by 'LT_INIT' configure.ac:6: warning: The macro `AC_CONFIG_HEADER' is obsolete. configure.ac:6: You should run autoupdate. ./lib/autoconf/status.m4:719: AC_CONFIG_HEADER is expanded from... configure.ac:6: the top level configure.ac:19: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:19: You should run autoupdate. aclocal.m4:122: AC_PROG_LIBTOOL is expanded from... configure.ac:19: the top level configure.ac:17: installing './compile' configure.ac:19: installing './config.guess' configure.ac:19: installing './config.sub' configure.ac:4: installing './install-sh' configure.ac:4: installing './missing' src/Makefile.am: installing './depcomp' dh_auto_configure -a ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=i686-linux-gnu configure: loading site script /etc/dpkg-cross/cross-config.i386 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for 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(cached) yes checking whether the i686-linux-gnu-gcc linker (/usr/i686-linux-gnu/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... i686-linux-gnu-g++ -E checking for ld used by i686-linux-gnu-g++... /usr/i686-linux-gnu/bin/ld checking if the linker (/usr/i686-linux-gnu/bin/ld) is GNU ld... yes checking whether the i686-linux-gnu-g++ linker (/usr/i686-linux-gnu/bin/ld) supports shared libraries... yes checking for i686-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if i686-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if i686-linux-gnu-g++ static flag -static works... yes checking if i686-linux-gnu-g++ supports -c -o file.o... yes checking if i686-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the i686-linux-gnu-g++ linker (/usr/i686-linux-gnu/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for zlib.h... yes checking for library containing gzopen... -lz checking for library containing lzma_code... -llzma checking for library containing BZ2_bzBuffToBuffDecompress... -lbz2 checking for library containing clock_gettime... none required checking for i686-linux-gnu-pkg-config... /usr/bin/i686-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for htslib... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/seqtools/Makefile config.status: creating libseqlib.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in src make[3]: Entering directory '/<>/src' /bin/bash ../libtool --tag=CXX --mode=compile i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/i686-linux-gnu-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-FastqReader.lo `test -f 'FastqReader.cpp' || echo './'`FastqReader.cpp libtool: compile: i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c FastqReader.cpp -fPIC -DPIC -o .libs/libseqlib_la-FastqReader.o libtool: compile: i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib 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-D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamWriter.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamWriter.o libtool: compile: i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamWriter.cpp -o libseqlib_la-BamWriter.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/i686-linux-gnu-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BamReader.lo `test -f 'BamReader.cpp' || echo './'`BamReader.cpp libtool: compile: i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamReader.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamReader.o libtool: compile: i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamReader.cpp -o libseqlib_la-BamReader.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/i686-linux-gnu-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BWAWrapper.lo `test -f 'BWAWrapper.cpp' || echo './'`BWAWrapper.cpp libtool: compile: i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BWAWrapper.cpp -fPIC -DPIC -o .libs/libseqlib_la-BWAWrapper.o libtool: compile: i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BWAWrapper.cpp -o libseqlib_la-BWAWrapper.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/i686-linux-gnu-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BamRecord.lo `test -f 'BamRecord.cpp' || echo './'`BamRecord.cpp libtool: compile: i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamRecord.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamRecord.o libtool: compile: i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamRecord.cpp -o libseqlib_la-BamRecord.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/i686-linux-gnu-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-FermiAssembler.lo `test -f 'FermiAssembler.cpp' || echo './'`FermiAssembler.cpp libtool: compile: i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c FermiAssembler.cpp -fPIC -DPIC -o .libs/libseqlib_la-FermiAssembler.o libtool: compile: i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c FermiAssembler.cpp -o libseqlib_la-FermiAssembler.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/i686-linux-gnu-pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BamHeader.lo `test -f 'BamHeader.cpp' || echo './'`BamHeader.cpp libtool: compile: i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamHeader.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamHeader.o libtool: compile: i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c BamHeader.cpp -o libseqlib_la-BamHeader.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link i686-linux-gnu-g++ -g -std=c++11 -Wno-unknown-pragmas -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 2:0 -lfml `/usr/bin/i686-linux-gnu-pkg-config --libs htslib` `/usr/bin/i686-linux-gnu-pkg-config --libs jsoncpp` -lssw -Wl,-z,relro -Wl,-z,now -o libseqlib.la -rpath /usr/lib/i386-linux-gnu libseqlib_la-FastqReader.lo libseqlib_la-BFC.lo libseqlib_la-ReadFilter.lo libseqlib_la-SeqPlot.lo libseqlib_la-GenomicRegion.lo libseqlib_la-RefGenome.lo libseqlib_la-BamWriter.lo libseqlib_la-BamReader.lo libseqlib_la-BWAWrapper.lo libseqlib_la-BamRecord.lo libseqlib_la-FermiAssembler.lo libseqlib_la-BamHeader.lo -lbz2 -llzma -lz -pthread libtool: link: i686-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc-cross/i686-linux-gnu/12/../../../../i686-linux-gnu/lib/../lib/crti.o /usr/lib/gcc-cross/i686-linux-gnu/12/crtbeginS.o .libs/libseqlib_la-FastqReader.o .libs/libseqlib_la-BFC.o .libs/libseqlib_la-ReadFilter.o .libs/libseqlib_la-SeqPlot.o .libs/libseqlib_la-GenomicRegion.o .libs/libseqlib_la-RefGenome.o .libs/libseqlib_la-BamWriter.o .libs/libseqlib_la-BamReader.o .libs/libseqlib_la-BWAWrapper.o .libs/libseqlib_la-BamRecord.o .libs/libseqlib_la-FermiAssembler.o .libs/libseqlib_la-BamHeader.o -lfml -lhts -ljsoncpp -lssw -lbz2 -llzma -lz -L/usr/lib/gcc-cross/i686-linux-gnu/12 -L/usr/lib/gcc-cross/i686-linux-gnu/12/../../../../i686-linux-gnu/lib/../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc-cross/i686-linux-gnu/12/../../../../i686-linux-gnu/lib -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc-cross/i686-linux-gnu/12/crtendS.o /usr/lib/gcc-cross/i686-linux-gnu/12/../../../../i686-linux-gnu/lib/../lib/crtn.o -g -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -pthread -Wl,-soname -Wl,libseqlib.so.2 -o .libs/libseqlib.so.2.0.0 libtool: link: (cd ".libs" && rm -f "libseqlib.so.2" && ln -s "libseqlib.so.2.0.0" "libseqlib.so.2") libtool: link: (cd ".libs" && rm -f "libseqlib.so" && ln -s "libseqlib.so.2.0.0" "libseqlib.so") libtool: link: i686-linux-gnu-ar cr .libs/libseqlib.a libseqlib_la-FastqReader.o libseqlib_la-BFC.o libseqlib_la-ReadFilter.o libseqlib_la-SeqPlot.o libseqlib_la-GenomicRegion.o libseqlib_la-RefGenome.o libseqlib_la-BamWriter.o libseqlib_la-BamReader.o libseqlib_la-BWAWrapper.o libseqlib_la-BamRecord.o libseqlib_la-FermiAssembler.o libseqlib_la-BamHeader.o libtool: link: i686-linux-gnu-ranlib .libs/libseqlib.a libtool: link: ( cd ".libs" && rm -f "libseqlib.la" && ln -s "../libseqlib.la" "libseqlib.la" ) make[3]: Leaving directory '/<>/src' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/libseqlib-1.2.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' echo "mkdir -p lib && cp src/libseqlib.a fermi-lite/libfml.a bwa/libbwa.a htslib/libhts.a lib" mkdir -p lib && cp src/libseqlib.a fermi-lite/libfml.a bwa/libbwa.a htslib/libhts.a lib make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install # Trick to get also headers moved by d-shlibmove cp -a SeqLib debian # note: also GenomicRegionCollection.cpp is really needed by freebayes d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/SeqLib usr/include \ --override s/libfml0-dev/libfml-dev/ \ --override s/libssw0-dev/libssw-dev/ \ src/.libs/libseqlib.so Library package automatic movement utility --> libfml-dev package exists. --> libhts-dev package exists. --> libjsoncpp-dev package exists. --> libssw-dev package exists. --> zlib1g-dev package exists. set -e install -d -m 755 debian/libseqlib-dev/usr/lib/i386-linux-gnu install -d -m 755 debian/libseqlib2/usr/lib/i386-linux-gnu mv src/.libs/libseqlib.a debian/libseqlib-dev/usr/lib/i386-linux-gnu mv src/.libs/libseqlib.so debian/libseqlib-dev/usr/lib/i386-linux-gnu mv /<>/src/.libs/libseqlib.so.2 debian/libseqlib2/usr/lib/i386-linux-gnu mv /<>/src/.libs/libseqlib.so.2.0.0 debian/libseqlib2/usr/lib/i386-linux-gnu PKGDEV=libseqlib-dev PKGSHL=libseqlib2 install -d -m 755 debian/libseqlib-dev/usr/include mv debian/SeqLib debian/libseqlib-dev/usr/include mkdir -p /<>/debian/libseqlib-dev/usr/lib/i386-linux-gnu/pkgconfig mv libseqlib.pc /<>/debian/libseqlib-dev/usr/lib/i386-linux-gnu/pkgconfig make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: symbol err_fflush used by debian/libseqlib2/usr/lib/i386-linux-gnu/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol kseq_init used by debian/libseqlib2/usr/lib/i386-linux-gnu/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bns_destroy used by debian/libseqlib2/usr/lib/i386-linux-gnu/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol err_fwrite used by debian/libseqlib2/usr/lib/i386-linux-gnu/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwt_dump_bwt used by debian/libseqlib2/usr/lib/i386-linux-gnu/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol nst_nt4_table used by debian/libseqlib2/usr/lib/i386-linux-gnu/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwa_fill_scmat used by debian/libseqlib2/usr/lib/i386-linux-gnu/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwt_dump_sa used by debian/libseqlib2/usr/lib/i386-linux-gnu/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol kseq_read used by debian/libseqlib2/usr/lib/i386-linux-gnu/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwt_cal_sa used by debian/libseqlib2/usr/lib/i386-linux-gnu/libseqlib.so.2.0.0 found in none of the libraries dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all) dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'libseqlib2' in '../libseqlib2_1.2.0+dfsg-9_i386.deb'. dpkg-deb: building package 'libseqlib2-dbgsym' in '../libseqlib2-dbgsym_1.2.0+dfsg-9_i386.deb'. dpkg-deb: building package 'libseqlib-dev' in '../libseqlib-dev_1.2.0+dfsg-9_i386.deb'. dpkg-genbuildinfo --build=any -O../libseqlib_1.2.0+dfsg-9_i386.buildinfo dpkg-genchanges --build=any -O../libseqlib_1.2.0+dfsg-9_i386.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2023-04-28T22:26:15Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libseqlib_1.2.0+dfsg-9_i386.changes: ------------------------------------ Format: 1.8 Date: Wed, 13 Jul 2022 07:34:09 +0200 Source: libseqlib Binary: libseqlib-dev libseqlib2 libseqlib2-dbgsym Built-For-Profiles: cross nocheck Architecture: i386 Version: 1.2.0+dfsg-9 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: libseqlib-dev - C++ htslib/bwa-mem/fermi interface for interrogating sequence dat libseqlib2 - C++ htslib/bwa-mem/fermi interface for interrogating sequence dat Closes: 1012992 Changes: libseqlib (1.2.0+dfsg-9) unstable; urgency=medium . * d/control: add myself to uploaders. * d/libseqlib2.symbols.amd64: refresh list of optional symbols. Closes: #1012992 * Standards-Version: 4.6.1 (routine-update) Checksums-Sha1: fe07aa3f86c26ef66c4a16179fe3eed5f4e7fbd3 225840 libseqlib-dev_1.2.0+dfsg-9_i386.deb 40700169833ca99b39b7872b65921273b1be8921 2233368 libseqlib2-dbgsym_1.2.0+dfsg-9_i386.deb 62a4885333e7998bda6271353edc797725985dc8 171692 libseqlib2_1.2.0+dfsg-9_i386.deb 0c6d16dee6efff03af745f7a85ad97dace302b9c 7054 libseqlib_1.2.0+dfsg-9_i386.buildinfo Checksums-Sha256: d8f78c7d772d0c670043d13ad25670369a1d5c032651205b4af5880aebfc1eac 225840 libseqlib-dev_1.2.0+dfsg-9_i386.deb 8b2afd20de268748690f2818477465f658ce103301bd61568a8a067c308a906b 2233368 libseqlib2-dbgsym_1.2.0+dfsg-9_i386.deb 7c4d7e69a55a79a6442a884885454345145c40fba94602c4376403cdd9bb4062 171692 libseqlib2_1.2.0+dfsg-9_i386.deb 0f1ebeb71985fa6ae3a02a4ae920bb68812d592b9a04917719b110d0c5283393 7054 libseqlib_1.2.0+dfsg-9_i386.buildinfo Files: ca75661b923b51ecf0d9593e1cc52993 225840 libdevel optional libseqlib-dev_1.2.0+dfsg-9_i386.deb b35cf684beac82512fdab094310d8651 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62a4885333e7998bda6271353edc797725985dc8 171692 libseqlib2_1.2.0+dfsg-9_i386.deb Checksums-Sha256: d8f78c7d772d0c670043d13ad25670369a1d5c032651205b4af5880aebfc1eac 225840 libseqlib-dev_1.2.0+dfsg-9_i386.deb 8b2afd20de268748690f2818477465f658ce103301bd61568a8a067c308a906b 2233368 libseqlib2-dbgsym_1.2.0+dfsg-9_i386.deb 7c4d7e69a55a79a6442a884885454345145c40fba94602c4376403cdd9bb4062 171692 libseqlib2_1.2.0+dfsg-9_i386.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Fri, 28 Apr 2023 22:26:13 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: apt (= 2.6.0), autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-12), autotools-dev (= 20220109.1), base-files (= 12.4), base-passwd (= 3.6.1), bash (= 5.2.15-2+b2), binutils (= 2.40-2), binutils-aarch64-linux-gnu (= 2.40-2), binutils-common (= 2.40-2), bsdextrautils (= 2.38.1-5+b1), bsdutils (= 1:2.38.1-5+b1), build-essential (= 12.9), bzip2 (= 1.0.8-5+b1), coreutils (= 9.1-1), cpp (= 4:12.2.0-3), cpp-12 (= 12.2.0-14), d-shlibs (= 0.104), dash (= 0.5.12-2), debconf (= 1.5.82), debhelper (= 13.11.4), debian-archive-keyring (= 2023.3), debianutils (= 5.7-0.4), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.8-4), dpkg (= 1.21.21), dpkg-dev (= 1.21.21), dwz (= 0.15-1), file (= 1:5.44-3), findutils (= 4.9.0-4), g++ (= 4:12.2.0-3), g++-12 (= 12.2.0-14), gcc (= 4:12.2.0-3), gcc-12 (= 12.2.0-14), gcc-12-base (= 12.2.0-14), gettext (= 0.21-12), gettext-base (= 0.21-12), gpgv (= 2.2.40-1.1), grep (= 3.8-5), groff-base (= 1.22.4-10), gzip (= 1.12-1), hostname (= 3.23+nmu1), init-system-helpers (= 1.65.2), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.1-3), libapt-pkg6.0 (= 2.6.0), libarchive-zip-perl (= 1.68-1), libasan8 (= 12.2.0-14), libatomic1 (= 12.2.0-14), libattr1 (= 1:2.5.1-4), libaudit-common (= 1:3.0.9-1), libaudit1 (= 1:3.0.9-1), libbinutils (= 2.40-2), libblkid1 (= 2.38.1-5+b1), libbrotli1 (= 1.0.9-2+b6), libbwa-dev (= 0.7.17-7+b2), libbz2-1.0 (= 1.0.8-5+b1), libbz2-dev (= 1.0.8-5+b1), libc-bin (= 2.36-9), libc-dev-bin (= 2.36-9), libc6 (= 2.36-9), libc6-dev (= 2.36-9), libcap-ng0 (= 0.8.3-1+b3), libcap2 (= 1:2.66-3), libcc1-0 (= 12.2.0-14), libcom-err2 (= 1.47.0-2), libcrypt-dev (= 1:4.4.33-2), libcrypt1 (= 1:4.4.33-2), libctf-nobfd0 (= 2.40-2), libctf0 (= 2.40-2), libcurl3-gnutls (= 7.88.1-9), libcurl4-gnutls-dev (= 7.88.1-9), libdb5.3 (= 5.3.28+dfsg2-1), libdebconfclient0 (= 0.269), libdebhelper-perl (= 13.11.4), libdeflate-dev (= 1.14-1), libdeflate0 (= 1.14-1), libdpkg-perl (= 1.21.21), libelf1 (= 0.188-2.1), libexpat1 (= 2.5.0-1), libffi8 (= 3.4.4-1), libfile-find-rule-perl (= 0.34-3), libfile-stripnondeterminism-perl (= 1.13.1-1), libfml-dev (= 0.1+git20190320.b499514-1+b1), libfml0 (= 0.1+git20190320.b499514-1+b1), libgcc-12-dev (= 12.2.0-14), libgcc-s1 (= 12.2.0-14), libgcrypt20 (= 1.10.1-3), libgdbm-compat4 (= 1.23-3), libgdbm6 (= 1.23-3), libgmp10 (= 2:6.2.1+dfsg1-1.1), libgnutls30 (= 3.7.9-2), libgomp1 (= 12.2.0-14), libgpg-error0 (= 1.46-1), libgprofng0 (= 2.40-2), libgssapi-krb5-2 (= 1.20.1-1+b1), libhogweed6 (= 3.8.1-2), libhts-dev (= 1.16+ds-3), libhts3 (= 1.16+ds-3), libhtscodecs2 (= 1.3.0-4), libhwasan0 (= 12.2.0-14), libicu72 (= 72.1-3), libidn2-0 (= 2.3.3-1+b1), libisl23 (= 0.25-1), libitm1 (= 12.2.0-14), libjansson4 (= 2.14-2), libjsoncpp-dev (= 1.9.5-4), libjsoncpp25 (= 1.9.5-4), libk5crypto3 (= 1.20.1-1+b1), libkeyutils1 (= 1.6.3-2), libkrb5-3 (= 1.20.1-1+b1), libkrb5support0 (= 1.20.1-1+b1), libldap-2.5-0 (= 2.5.13+dfsg-5), liblsan0 (= 12.2.0-14), liblz4-1 (= 1.9.4-1), liblzma-dev (= 5.4.1-0.2), liblzma5 (= 5.4.1-0.2), libmagic-mgc (= 1:5.44-3), libmagic1 (= 1:5.44-3), libmd0 (= 1.0.4-2), libmount1 (= 2.38.1-5+b1), libmpc3 (= 1.3.1-1), libmpfr6 (= 4.2.0-1), libncursesw6 (= 6.4-2), libnettle8 (= 3.8.1-2), libnghttp2-14 (= 1.52.0-1), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libnumber-compare-perl (= 0.03-3), libp11-kit0 (= 0.24.1-2), libpam-modules (= 1.5.2-6), libpam-modules-bin (= 1.5.2-6), libpam-runtime (= 1.5.2-6), libpam0g (= 1.5.2-6), libpcre2-8-0 (= 10.42-1), libperl5.36 (= 5.36.0-7), libpipeline1 (= 1.5.7-1), libpkgconf3 (= 1.8.1-1), libpsl5 (= 0.21.2-1), libpython3-stdlib (= 3.11.2-1+b1), libpython3.11-minimal (= 3.11.2-6), libpython3.11-stdlib (= 3.11.2-6), libreadline8 (= 8.2-1.3), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2), libsasl2-2 (= 2.1.28+dfsg-11), libsasl2-modules-db (= 2.1.28+dfsg-11), libseccomp2 (= 2.5.4-1+b3), libselinux1 (= 3.4-1+b5), libsmartcols1 (= 2.38.1-5+b1), libsqlite3-0 (= 3.40.1-2), libssh2-1 (= 1.10.0-3+b1), libssl3 (= 3.0.8-1), libssw-dev (= 1.1-13), libssw0 (= 1.1-13), libstdc++-12-dev (= 12.2.0-14), libstdc++6 (= 12.2.0-14), libsub-override-perl (= 0.09-4), libsystemd0 (= 252.6-1), libtasn1-6 (= 4.19.0-2), libtext-glob-perl (= 0.11-3), libtinfo6 (= 6.4-2), libtirpc-common (= 1.3.3+ds-1), libtirpc-dev (= 1.3.3+ds-1), libtirpc3 (= 1.3.3+ds-1), libtool (= 2.4.7-5), libtsan2 (= 12.2.0-14), libubsan1 (= 12.2.0-14), libuchardet0 (= 0.0.7-1), libudev1 (= 252.6-1), libunistring2 (= 1.0-2), libuuid1 (= 2.38.1-5+b1), libxml2 (= 2.9.14+dfsg-1.2), libxxhash0 (= 0.8.1-1), libzstd1 (= 1.5.4+dfsg2-5), linux-libc-dev (= 6.1.25-1), login (= 1:4.13+dfsg1-1+b1), m4 (= 1.4.19-3), make (= 4.3-4.1), man-db (= 2.11.2-2), mawk (= 1.3.4.20200120-3.1), media-types (= 10.0.0), ncurses-base (= 6.4-2), ncurses-bin (= 6.4-2), patch (= 2.7.6-7), perl (= 5.36.0-7), perl-base (= 5.36.0-7), perl-modules-5.36 (= 5.36.0-7), pkg-config (= 1.8.1-1), pkg-kde-tools (= 0.15.38), pkgconf (= 1.8.1-1), pkgconf-bin (= 1.8.1-1), po-debconf (= 1.0.21+nmu1), python3 (= 3.11.2-1+b1), python3-minimal (= 3.11.2-1+b1), python3.11 (= 3.11.2-6), python3.11-minimal (= 3.11.2-6), readline-common (= 8.2-1.3), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-1), sensible-utils (= 0.0.17+nmu1), sysvinit-utils (= 3.06-4), tar (= 1.34+dfsg-1.2), usrmerge (= 35), util-linux (= 2.38.1-5+b1), util-linux-extra (= 2.38.1-5+b1), xz-utils (= 5.4.1-0.2), zlib1g (= 1:1.2.13.dfsg-1), zlib1g-dev (= 1:1.2.13.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_GB.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1657690449" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libseqlib-dev_1.2.0+dfsg-9_i386.deb ----------------------------------- new Debian package, version 2.0. size 225840 bytes: control archive=1752 bytes. 1333 bytes, 25 lines control 1725 bytes, 25 lines md5sums Package: libseqlib-dev Source: libseqlib Version: 1.2.0+dfsg-9 Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 1022 Depends: libseqlib2 (= 1.2.0+dfsg-9), libfml-dev, libhts-dev, libjsoncpp-dev, libssw-dev, zlib1g-dev, libbwa-dev Section: libdevel Priority: optional Multi-Arch: same Homepage: https://github.com/walaj/SeqLib Description: C++ htslib/bwa-mem/fermi interface for interrogating sequence data (dev) C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment. . This package contains the header files and static library. drwxr-xr-x root/root 0 2022-07-13 05:34 ./ drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/ drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/include/ drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/include/SeqLib/ -rw-r--r-- root/root 3874 2022-07-13 05:34 ./usr/include/SeqLib/BFC.h -rw-r--r-- root/root 7129 2021-01-07 04:18 ./usr/include/SeqLib/BWAWrapper.h -rw-r--r-- root/root 3605 2022-07-13 05:34 ./usr/include/SeqLib/BamHeader.h -rw-r--r-- root/root 9275 2021-01-07 04:18 ./usr/include/SeqLib/BamReader.h -rw-r--r-- root/root 32406 2022-07-13 05:34 ./usr/include/SeqLib/BamRecord.h -rw-r--r-- root/root 1979 2021-01-07 04:18 ./usr/include/SeqLib/BamWalker.h -rw-r--r-- root/root 3473 2021-01-07 04:18 ./usr/include/SeqLib/BamWriter.h -rw-r--r-- root/root 1170 2021-01-07 04:18 ./usr/include/SeqLib/FastqReader.h -rw-r--r-- root/root 4281 2022-07-13 05:34 ./usr/include/SeqLib/FermiAssembler.h -rw-r--r-- root/root 6354 2021-01-07 04:18 ./usr/include/SeqLib/GenomicRegion.h -rw-r--r-- root/root 19869 2021-01-07 04:18 ./usr/include/SeqLib/GenomicRegionCollection.cpp -rw-r--r-- root/root 11804 2021-01-07 04:18 ./usr/include/SeqLib/GenomicRegionCollection.h -rw-r--r-- root/root 7320 2021-01-07 04:18 ./usr/include/SeqLib/IntervalTree.h -rw-r--r-- root/root 17538 2021-01-07 04:18 ./usr/include/SeqLib/ReadFilter.h -rw-r--r-- root/root 1387 2022-07-13 05:34 ./usr/include/SeqLib/RefGenome.h -rw-r--r-- root/root 3832 2021-01-07 04:18 ./usr/include/SeqLib/SeqLibCommon.h -rw-r--r-- root/root 4176 2021-01-07 04:18 ./usr/include/SeqLib/SeqLibUtils.h -rw-r--r-- root/root 2455 2021-01-07 04:18 ./usr/include/SeqLib/SeqPlot.h -rw-r--r-- root/root 577 2021-01-07 04:18 ./usr/include/SeqLib/ThreadPool.h -rw-r--r-- root/root 2421 2021-01-07 04:18 ./usr/include/SeqLib/UnalignedSequence.h -rw-r--r-- root/root 17078 2021-01-07 04:18 ./usr/include/SeqLib/aho_corasick.hpp drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/lib/ drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/lib/i386-linux-gnu/ -rw-r--r-- root/root 853738 2022-07-13 05:34 ./usr/lib/i386-linux-gnu/libseqlib.a lrwxrwxrwx root/root 0 2022-07-13 05:34 ./usr/lib/i386-linux-gnu/libseqlib.so -> libseqlib.so.2.0.0 drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/lib/i386-linux-gnu/pkgconfig/ -rw-r--r-- root/root 301 2022-07-13 05:34 ./usr/lib/i386-linux-gnu/pkgconfig/libseqlib.pc drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/share/ drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/share/doc/libseqlib-dev/ -rw-r--r-- root/root 1543 2022-07-13 05:34 ./usr/share/doc/libseqlib-dev/changelog.Debian.gz -rw-r--r-- root/root 2658 2022-07-13 05:34 ./usr/share/doc/libseqlib-dev/copyright libseqlib2-dbgsym_1.2.0+dfsg-9_i386.deb --------------------------------------- new Debian package, version 2.0. size 2233368 bytes: control archive=556 bytes. 408 bytes, 13 lines control 106 bytes, 1 lines md5sums Package: libseqlib2-dbgsym Source: libseqlib Version: 1.2.0+dfsg-9 Auto-Built-Package: debug-symbols Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 2277 Depends: libseqlib2 (= 1.2.0+dfsg-9) Section: debug Priority: optional Multi-Arch: same Description: debug symbols for libseqlib2 Build-Ids: 5972576030c0302145e2f924e7bdbfe4b273a96c drwxr-xr-x root/root 0 2022-07-13 05:34 ./ drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/ drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/lib/ drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/lib/debug/ drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/lib/debug/.build-id/59/ -rw-r--r-- root/root 2321024 2022-07-13 05:34 ./usr/lib/debug/.build-id/59/72576030c0302145e2f924e7bdbfe4b273a96c.debug drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/share/ drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/share/doc/ lrwxrwxrwx root/root 0 2022-07-13 05:34 ./usr/share/doc/libseqlib2-dbgsym -> libseqlib2 libseqlib2_1.2.0+dfsg-9_i386.deb -------------------------------- new Debian package, version 2.0. size 171692 bytes: control archive=1236 bytes. 1329 bytes, 23 lines control 224 bytes, 3 lines md5sums 39 bytes, 1 lines shlibs 68 bytes, 2 lines triggers Package: libseqlib2 Source: libseqlib Version: 1.2.0+dfsg-9 Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 502 Depends: libc6 (>= 2.33), libfml0 (>= 0.1+git20190320.b499514), libgcc-s1 (>= 3.0), libhts3 (>= 1.10), libjsoncpp25 (>= 1.9.5), libssw0 (>= 1.1), libstdc++6 (>= 11), zlib1g (>= 1:1.1.4) Section: libs Priority: optional Multi-Arch: same Homepage: https://github.com/walaj/SeqLib Description: C++ htslib/bwa-mem/fermi interface for interrogating sequence data C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment. drwxr-xr-x root/root 0 2022-07-13 05:34 ./ drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/ drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/lib/ drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/lib/i386-linux-gnu/ lrwxrwxrwx root/root 0 2022-07-13 05:34 ./usr/lib/i386-linux-gnu/libseqlib.so.2 -> libseqlib.so.2.0.0 -rw-r--r-- root/root 497544 2022-07-13 05:34 ./usr/lib/i386-linux-gnu/libseqlib.so.2.0.0 drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/share/ drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-07-13 05:34 ./usr/share/doc/libseqlib2/ -rw-r--r-- root/root 1545 2022-07-13 05:34 ./usr/share/doc/libseqlib2/changelog.Debian.gz -rw-r--r-- root/root 2658 2022-07-13 05:34 ./usr/share/doc/libseqlib2/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:arm64 Filtered Build-Depends: lintian:arm64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1483 B] Get:5 copy:/<>/apt_archive ./ Packages [1546 B] Fetched 3644 B in 0s (198 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libregexp-ipv6-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libregexp-ipv6-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip sbuild-build-depends-lintian-dummy:i386 t1utils unzip 0 upgraded, 124 newly installed, 0 to remove and 0 not upgraded. Need to get 12.5 MB of archives. After this operation, 50.7 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 netbase all 6.4 [12.8 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 openssl arm64 3.0.8-1 [1373 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 ca-certificates all 20230311 [153 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 diffstat arm64 1.65-1 [31.2 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 libassuan0 arm64 2.5.5-5 [45.9 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 gpgconf arm64 2.2.40-1.1 [557 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 gpg arm64 2.2.40-1.1 [903 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 iso-codes all 4.13.0-1 [2899 kB] Get:10 http://mirror.einval.org/debian unstable/main arm64 libaliased-perl all 0.34-3 [13.5 kB] Get:11 http://mirror.einval.org/debian unstable/main arm64 libapt-pkg-perl arm64 0.1.40+b2 [66.1 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 libb-hooks-op-check-perl arm64 0.22-2+b1 [10.4 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 libdevel-callchecker-perl arm64 0.008-2 [15.9 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 libparams-classify-perl arm64 0.015-2+b1 [22.9 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:17 http://mirror.einval.org/debian unstable/main arm64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:20 http://mirror.einval.org/debian unstable/main arm64 libvariable-magic-perl arm64 0.63-1+b1 [42.8 kB] Get:21 http://mirror.einval.org/debian unstable/main arm64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get:22 http://mirror.einval.org/debian unstable/main arm64 libberkeleydb-perl arm64 0.64-2+b1 [121 kB] Get:23 http://mirror.einval.org/debian unstable/main arm64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 libhtml-tagset-perl all 3.20-6 [11.7 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 libregexp-ipv6-perl all 0.03-3 [5212 B] Get:26 http://mirror.einval.org/debian unstable/main arm64 liburi-perl all 5.17-1 [90.4 kB] Get:27 http://mirror.einval.org/debian unstable/main arm64 libhtml-parser-perl arm64 3.81-1 [98.6 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 libcgi-pm-perl all 4.55-1 [220 kB] Get:29 http://mirror.einval.org/debian unstable/main arm64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:30 http://mirror.einval.org/debian unstable/main arm64 libclass-method-modifiers-perl all 2.14-1 [18.1 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 libclass-xsaccessor-perl arm64 1.19-4+b1 [35.3 kB] Get:32 http://mirror.einval.org/debian unstable/main arm64 libclone-perl arm64 0.46-1 [13.5 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 libconfig-tiny-perl all 2.28-2 [16.4 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 libparams-util-perl arm64 1.102-2+b1 [24.2 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 libsub-install-perl all 0.929-1 [10.5 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 libdata-optlist-perl all 0.113-1 [10.6 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libsub-exporter-perl all 0.989-1 [50.5 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 libconst-fast-perl all 0.014-2 [8792 B] Get:39 http://mirror.einval.org/debian unstable/main arm64 libcpanel-json-xs-perl arm64 4.35-1 [128 kB] Get:40 http://mirror.einval.org/debian unstable/main arm64 libdevel-stacktrace-perl all 2.0400-2 [26.8 kB] Get:41 http://mirror.einval.org/debian unstable/main arm64 libexception-class-perl all 1.45-1 [34.6 kB] Get:42 http://mirror.einval.org/debian unstable/main arm64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:43 http://mirror.einval.org/debian unstable/main arm64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:44 http://mirror.einval.org/debian unstable/main arm64 libdata-dpath-perl all 0.58-2 [43.6 kB] Get:45 http://mirror.einval.org/debian unstable/main arm64 libdata-messagepack-perl arm64 1.02-1+b1 [34.0 kB] Get:46 http://mirror.einval.org/debian unstable/main arm64 libnet-domain-tld-perl all 1.75-3 [31.9 kB] Get:47 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:48 http://mirror.einval.org/debian unstable/main arm64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:49 http://mirror.einval.org/debian unstable/main arm64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:50 http://mirror.einval.org/debian unstable/main arm64 libnetaddr-ip-perl arm64 4.079+dfsg-2+b1 [98.8 kB] Get:51 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-uri-perl all 0.07-2 [11.2 kB] Get:53 http://mirror.einval.org/debian unstable/main arm64 libdevel-size-perl arm64 0.83-2+b1 [24.2 kB] Get:54 http://mirror.einval.org/debian unstable/main arm64 libemail-address-xs-perl arm64 1.05-1+b1 [28.3 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:57 http://mirror.einval.org/debian unstable/main arm64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:58 http://mirror.einval.org/debian unstable/main arm64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 libhttp-date-perl all 6.05-2 [10.5 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 libfile-listing-perl all 6.15-1 [12.6 kB] Get:61 http://mirror.einval.org/debian unstable/main arm64 libfont-ttf-perl all 1.06-2 [318 kB] Get:62 http://mirror.einval.org/debian unstable/main arm64 libio-html-perl all 1.004-3 [16.2 kB] Get:63 http://mirror.einval.org/debian unstable/main arm64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:64 http://mirror.einval.org/debian unstable/main arm64 libhttp-message-perl all 6.44-1 [81.7 kB] Get:65 http://mirror.einval.org/debian unstable/main arm64 libhtml-form-perl all 6.11-1 [33.1 kB] Get:66 http://mirror.einval.org/debian unstable/main arm64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:67 http://mirror.einval.org/debian unstable/main arm64 libhtml-tree-perl all 5.07-3 [211 kB] Get:68 http://mirror.einval.org/debian unstable/main arm64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:69 http://mirror.einval.org/debian unstable/main arm64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:70 http://mirror.einval.org/debian unstable/main arm64 perl-openssl-defaults arm64 7+b1 [7924 B] Get:71 http://mirror.einval.org/debian unstable/main arm64 libnet-ssleay-perl arm64 1.92-2+b1 [308 kB] Get:72 http://mirror.einval.org/debian unstable/main arm64 libio-socket-ssl-perl all 2.081-2 [219 kB] Get:73 http://mirror.einval.org/debian unstable/main arm64 libnet-http-perl all 6.22-1 [25.3 kB] Get:74 http://mirror.einval.org/debian unstable/main arm64 liblwp-protocol-https-perl all 6.10-1 [12.2 kB] Get:75 http://mirror.einval.org/debian unstable/main arm64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:76 http://mirror.einval.org/debian unstable/main arm64 libwww-perl all 6.68-1 [186 kB] Get:77 http://mirror.einval.org/debian unstable/main arm64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:78 http://mirror.einval.org/debian unstable/main arm64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:79 http://mirror.einval.org/debian unstable/main arm64 libio-interactive-perl all 1.023-2 [11.0 kB] Get:80 http://mirror.einval.org/debian unstable/main arm64 libipc-run3-perl all 0.048-3 [33.2 kB] Get:81 http://mirror.einval.org/debian unstable/main arm64 libjson-maybexs-perl all 1.004004-1 [13.3 kB] Get:82 http://mirror.einval.org/debian unstable/main arm64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:83 http://mirror.einval.org/debian unstable/main arm64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:84 http://mirror.einval.org/debian unstable/main arm64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:85 http://mirror.einval.org/debian unstable/main arm64 liblz1 arm64 1.13-5 [38.9 kB] Get:86 http://mirror.einval.org/debian unstable/main arm64 liblzo2-2 arm64 2.10-2 [51.8 kB] Get:87 http://mirror.einval.org/debian unstable/main arm64 libmarkdown2 arm64 2.2.7-2 [34.1 kB] Get:88 http://mirror.einval.org/debian unstable/main arm64 libmldbm-perl all 2.05-4 [16.8 kB] Get:89 http://mirror.einval.org/debian unstable/main arm64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:90 http://mirror.einval.org/debian unstable/main arm64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:91 http://mirror.einval.org/debian unstable/main arm64 libmoo-perl all 2.005005-1 [58.0 kB] Get:92 http://mirror.einval.org/debian unstable/main arm64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:93 http://mirror.einval.org/debian unstable/main arm64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:94 http://mirror.einval.org/debian unstable/main arm64 libmouse-perl arm64 2.5.10-1+b3 [167 kB] Get:95 http://mirror.einval.org/debian unstable/main arm64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:96 http://mirror.einval.org/debian unstable/main arm64 libsub-identify-perl arm64 0.14-3 [10.9 kB] Get:97 http://mirror.einval.org/debian unstable/main arm64 libsub-name-perl arm64 0.26-2+b1 [12.4 kB] Get:98 http://mirror.einval.org/debian unstable/main arm64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:99 http://mirror.einval.org/debian unstable/main arm64 libpath-tiny-perl all 0.144-1 [56.4 kB] Get:100 http://mirror.einval.org/debian unstable/main arm64 libperlio-gzip-perl arm64 0.20-1+b1 [17.1 kB] Get:101 http://mirror.einval.org/debian unstable/main arm64 libperlio-utf8-strict-perl arm64 0.010-1 [11.2 kB] Get:102 http://mirror.einval.org/debian unstable/main arm64 libproc-processtable-perl arm64 0.634-1+b2 [42.4 kB] Get:103 http://mirror.einval.org/debian unstable/main arm64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:104 http://mirror.einval.org/debian unstable/main arm64 libsereal-decoder-perl arm64 5.003+ds-1 [95.6 kB] Get:105 http://mirror.einval.org/debian unstable/main arm64 libsereal-encoder-perl arm64 5.003+ds-1 [97.1 kB] Get:106 http://mirror.einval.org/debian unstable/main arm64 libsort-versions-perl all 1.62-3 [8928 B] Get:107 http://mirror.einval.org/debian unstable/main arm64 libxs-parse-keyword-perl arm64 0.33-1 [57.0 kB] Get:108 http://mirror.einval.org/debian unstable/main arm64 libsyntax-keyword-try-perl arm64 0.28-1 [28.2 kB] Get:109 http://mirror.einval.org/debian unstable/main arm64 libterm-readkey-perl arm64 2.38-2+b1 [24.1 kB] Get:110 http://mirror.einval.org/debian unstable/main arm64 libtext-levenshteinxs-perl arm64 0.03-5+b1 [8396 B] Get:111 http://mirror.einval.org/debian unstable/main arm64 libtext-markdown-discount-perl arm64 0.16-1 [13.0 kB] Get:112 http://mirror.einval.org/debian unstable/main arm64 libtext-xslate-perl arm64 3.5.9-1+b2 [196 kB] Get:113 http://mirror.einval.org/debian unstable/main arm64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:114 http://mirror.einval.org/debian unstable/main arm64 libtime-moment-perl arm64 0.44-2+b1 [72.2 kB] Get:115 http://mirror.einval.org/debian unstable/main arm64 libunicode-utf8-perl arm64 0.62-2 [19.9 kB] Get:116 http://mirror.einval.org/debian unstable/main arm64 libwww-mechanize-perl all 2.16-1 [116 kB] Get:117 http://mirror.einval.org/debian unstable/main arm64 libyaml-0-2 arm64 0.2.5-1 [50.4 kB] Get:118 http://mirror.einval.org/debian unstable/main arm64 libyaml-libyaml-perl arm64 0.86+ds-1 [32.8 kB] Get:119 http://mirror.einval.org/debian unstable/main arm64 plzip arm64 1.10-5 [58.0 kB] Get:120 http://mirror.einval.org/debian unstable/main arm64 lzop arm64 1.04-2 [82.8 kB] Get:121 http://mirror.einval.org/debian unstable/main arm64 patchutils arm64 0.4.2-1 [73.5 kB] Get:122 http://mirror.einval.org/debian unstable/main arm64 t1utils arm64 1.41-4 [59.8 kB] Get:123 http://mirror.einval.org/debian unstable/main arm64 unzip arm64 6.0-28 [157 kB] Get:124 http://mirror.einval.org/debian unstable/main arm64 lintian all 2.116.3 [1130 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 12.5 MB in 0s (49.1 MB/s) Selecting previously unselected package netbase. (Reading database ... 17960 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package openssl. Preparing to unpack .../001-openssl_3.0.8-1_arm64.deb ... Unpacking openssl (3.0.8-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../002-ca-certificates_20230311_all.deb ... Unpacking ca-certificates (20230311) ... Selecting previously unselected package diffstat. Preparing to unpack .../003-diffstat_1.65-1_arm64.deb ... Unpacking diffstat (1.65-1) ... Selecting previously unselected package libassuan0:arm64. Preparing to unpack .../004-libassuan0_2.5.5-5_arm64.deb ... Unpacking libassuan0:arm64 (2.5.5-5) ... Selecting previously unselected package gpgconf. Preparing to unpack .../005-gpgconf_2.2.40-1.1_arm64.deb ... Unpacking gpgconf (2.2.40-1.1) ... Selecting previously unselected package gpg. 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Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../017-libsub-exporter-progressive-perl_0.001013-3_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-3) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../018-libvariable-magic-perl_0.63-1+b1_arm64.deb ... Unpacking libvariable-magic-perl (0.63-1+b1) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../019-libb-hooks-endofscope-perl_0.26-1_all.deb ... Unpacking libb-hooks-endofscope-perl (0.26-1) ... Selecting previously unselected package libberkeleydb-perl:arm64. Preparing to unpack .../020-libberkeleydb-perl_0.64-2+b1_arm64.deb ... Unpacking libberkeleydb-perl:arm64 (0.64-2+b1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../021-libcapture-tiny-perl_0.48-2_all.deb ... Unpacking libcapture-tiny-perl (0.48-2) ... 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Preparing to unpack .../121-unzip_6.0-28_arm64.deb ... Unpacking unzip (6.0-28) ... Selecting previously unselected package lintian. Preparing to unpack .../122-lintian_2.116.3_all.deb ... Unpacking lintian (2.116.3) ... Selecting previously unselected package sbuild-build-depends-lintian-dummy:i386. Preparing to unpack .../123-sbuild-build-depends-lintian-dummy_0.invalid.0_i386.deb ... Unpacking sbuild-build-depends-lintian-dummy:i386 (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.40+b2) ... Setting up liblz1:arm64 (1.13-5) ... Setting up libberkeleydb-perl:arm64 (0.64-2+b1) ... Setting up plzip (1.10-5) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-2) ... Setting up libmouse-perl (2.5.10-1+b3) ... Setting up libdata-messagepack-perl (1.02-1+b1) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libclass-method-modifiers-perl (2.14-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:arm64 (0.46-1) ... Setting up libyaml-0-2:arm64 (0.2.5-1) ... Setting up libsub-identify-perl (0.14-3) ... Setting up libcpanel-json-xs-perl:arm64 (4.35-1) ... Setting up libhtml-tagset-perl (3.20-6) ... Setting up libdevel-size-perl (0.83-2+b1) ... Setting up unzip (6.0-28) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.86+ds-1) ... Setting up libio-interactive-perl (1.023-2) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up perl-openssl-defaults:arm64 (7+b1) ... Setting up libmldbm-perl (2.05-4) ... Setting up liblzo2-2:arm64 (2.10-2) ... Setting up libtime-moment-perl (0.44-2+b1) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libassuan0:arm64 (2.5.5-5) ... Setting up libconfig-tiny-perl (2.28-2) ... Setting up libsereal-encoder-perl (5.003+ds-1) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up libnet-netmask-perl (2.0002-2) ... Setting up libsub-install-perl (0.929-1) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004004-1) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2+b1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libxs-parse-keyword-perl (0.33-1) ... Setting up libipc-system-simple-perl (1.30-2) ... Setting up libnet-domain-tld-perl (1.75-3) ... Setting up libperlio-utf8-strict-perl (0.010-1) ... Setting up t1utils (1.41-4) ... Setting up diffstat (1.65-1) ... Setting up libvariable-magic-perl (0.63-1+b1) ... Setting up libio-html-perl (1.004-3) ... Setting up libb-hooks-op-check-perl:arm64 (0.22-2+b1) ... Setting up libparams-util-perl (1.102-2+b1) ... Setting up libtime-duration-perl (1.21-2) ... Setting up libtext-xslate-perl:arm64 (3.5.9-1+b2) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up libcapture-tiny-perl (0.48-2) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libregexp-ipv6-perl (0.03-3) ... Setting up libsub-name-perl:arm64 (0.26-2+b1) ... Setting up libsyntax-keyword-try-perl (0.28-1) ... Setting up libdata-validate-domain-perl (0.10-1.1) ... Setting up libproc-processtable-perl:arm64 (0.634-1+b2) ... Setting up libpath-tiny-perl (0.144-1) ... Setting up lzop (1.04-2) ... Setting up gpgconf (2.2.40-1.1) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libipc-run3-perl (0.048-3) ... Setting up libregexp-wildcards-perl (1.05-3) ... Setting up libaliased-perl (0.34-3) ... Setting up netbase (6.4) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006008-1) ... Setting up libdevel-stacktrace-perl (2.0400-2) ... Setting up libclass-xsaccessor-perl (1.19-4+b1) ... Setting up libsort-versions-perl (1.62-3) ... Setting up libterm-readkey-perl (2.38-2+b1) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.0.8-1) ... Setting up libtext-levenshteinxs-perl (0.03-5+b1) ... Setting up libperlio-gzip-perl (0.20-1+b1) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.003+ds-1) ... Setting up libmarkdown2:arm64 (2.2.7-2) ... Setting up liburi-perl (5.17-1) ... Setting up iso-codes (4.13.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up gpg (2.2.40-1.1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b1) ... Setting up libnet-ssleay-perl:arm64 (1.92-2+b1) ... Setting up libhttp-date-perl (6.05-2) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.15-1) ... Setting up libnet-http-perl (6.22-1) ... Setting up libtext-markdown-discount-perl (0.16-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:arm64 (0.008-2) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.113-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:arm64 (3.81-1) ... Setting up libio-socket-ssl-perl (2.081-2) ... Setting up libsub-exporter-perl (0.989-1) ... Setting up libhttp-message-perl (6.44-1) ... Setting up libhtml-form-perl (6.11-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:arm64 (0.015-2+b1) ... Setting up libcgi-pm-perl (4.55-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.58-2) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.68-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.16-1) ... Setting up liblwp-protocol-https-perl (6.10-1) ... Setting up lintian (2.116.3) ... Setting up sbuild-build-depends-lintian-dummy:i386 (0.invalid.0) ... Processing triggers for libc-bin (2.36-9) ... Processing triggers for man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Build-Space: 33628 Build-Time: 265 Distribution: unstable Foreign Architectures: i386 Host Architecture: i386 Install-Time: 59 Job: libseqlib_1.2.0+dfsg-9 Lintian: pass Machine Architecture: arm64 Package: libseqlib Package-Time: 359 Source-Version: 1.2.0+dfsg-9 Space: 33628 Status: successful Version: 1.2.0+dfsg-9 -------------------------------------------------------------------------------- Finished at 2023-04-28T22:26:15Z Build needed 00:05:59, 33628k disk space