sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on gcc131.bak.milne.osuosl.org +===================================================================================+ | libsmithwaterman 0.0+git20160702.2610e25-7 (mips) Tue, 14 May 2019 23:56:48 +0000 | +===================================================================================+ Package: libsmithwaterman Version: 0.0+git20160702.2610e25-7 Source Version: 0.0+git20160702.2610e25-7 Distribution: unstable Machine Architecture: amd64 Host Architecture: mips Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-e8a1bac1-7188-4084-8ef6-01b7c3116fd4' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [247 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-05-14-0810.46.pdiff [1888 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-05-14-1411.04.pdiff [457 B] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2019-05-14-2011.30.pdiff [16.1 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2019-05-14-2011.30.pdiff [16.1 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-05-14-0810.46.pdiff [4470 B] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-05-14-1411.04.pdiff [373 B] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-05-14-2011.30.pdiff [2720 B] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-05-14-2011.30.pdiff [2720 B] Get:10 http://debian.oregonstate.edu/debian unstable/main mips Packages [7991 kB] Fetched 8319 kB in 2s (4438 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: gpgv 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 587 kB of archives. After this operation, 0 B of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 gpgv amd64 2.2.13-2 [587 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 587 kB in 0s (30.0 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11942 files and directories currently installed.) Preparing to unpack .../gpgv_2.2.13-2_amd64.deb ... Unpacking gpgv (2.2.13-2) over (2.2.13-1) ... Setting up gpgv (2.2.13-2) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'libsmithwaterman' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libsmithwaterman.git Please use: git clone https://salsa.debian.org/med-team/libsmithwaterman.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 33.4 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main libsmithwaterman 0.0+git20160702.2610e25-7 (dsc) [2280 B] Get:2 http://debian.oregonstate.edu/debian unstable/main libsmithwaterman 0.0+git20160702.2610e25-7 (tar) [24.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main libsmithwaterman 0.0+git20160702.2610e25-7 (diff) [6292 B] Fetched 33.4 kB in 0s (746 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/libsmithwaterman-GSLGps/libsmithwaterman-0.0+git20160702.2610e25' with '<>' I: NOTICE: Log filtering will replace 'build/libsmithwaterman-GSLGps' with '<>' +------------------------------------------------------------------------------+ | Install crossbuild-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips:amd64 Filtered Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips:amd64 dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-Pw1PMU/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-Pw1PMU/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Pw1PMU/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-Pw1PMU/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Pw1PMU/apt_archive ./ Sources [360 B] Get:5 copy:/<>/resolver-Pw1PMU/apt_archive ./ Packages [450 B] Fetched 1767 B in 0s (95.0 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils-mips-linux-gnu cpp-8-mips-linux-gnu cpp-mips-linux-gnu cross-config crossbuild-essential-mips dpkg-cross file g++-8-mips-linux-gnu g++-mips-linux-gnu gcc-8-cross-base gcc-8-mips-linux-gnu gcc-8-mips-linux-gnu-base gcc-mips-linux-gnu libatomic1-mips-cross libc6-dev-mips-cross libc6-mips-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-mips-cross libgcc1-mips-cross libgomp1-mips-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-mips-cross libstdc++6-mips-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-mips-cross sensible-utils ucf Suggested packages: binutils-doc gcc-8-locales cpp-doc binutils-multiarch g++-8-multilib-mips-linux-gnu gcc-8-doc libstdc++6-8-dbg-mips-cross gcc-8-multilib-mips-linux-gnu libgcc1-dbg-mips-cross libgomp1-dbg-mips-cross libitm1-dbg-mips-cross libatomic1-dbg-mips-cross libasan5-dbg-mips-cross liblsan0-dbg-mips-cross libtsan0-dbg-mips-cross libubsan1-dbg-mips-cross libmpx2-dbg-mips-cross libquadmath0-dbg-mips-cross manpages-dev autoconf automake libtool flex bison gdb-mips-linux-gnu gcc-doc libyaml-shell-perl Recommended packages: libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl The following NEW packages will be installed: binutils-mips-linux-gnu cpp-8-mips-linux-gnu cpp-mips-linux-gnu cross-config crossbuild-essential-mips dpkg-cross file g++-8-mips-linux-gnu g++-mips-linux-gnu gcc-8-cross-base gcc-8-mips-linux-gnu gcc-8-mips-linux-gnu-base gcc-mips-linux-gnu libatomic1-mips-cross libc6-dev-mips-cross libc6-mips-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-mips-cross libgcc1-mips-cross libgomp1-mips-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-mips-cross libstdc++6-mips-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-mips-cross sbuild-build-depends-core-dummy:mips sensible-utils ucf 0 upgraded, 42 newly installed, 0 to remove and 0 not upgraded. Need to get 40.0 MB of archives. After this operation, 146 MB of additional disk space will be used. Get:1 copy:/<>/resolver-Pw1PMU/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [872 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.35-4 [242 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.35-4 [117 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.35-4 [66.3 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mips-linux-gnu amd64 2.31.1-16 [2488 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-mips-linux-gnu-base amd64 8.3.0-7cross1 [191 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-8-mips-linux-gnu amd64 8.3.0-7cross1 [6277 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mips-linux-gnu amd64 4:8.3.0-1 [16.5 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-2 [39.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-cross-base all 8.3.0-7cross1 [186 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mips-cross all 2.28-10cross2 [1215 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-mips-cross all 1:8.3.0-7cross1 [45.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mips-cross all 8.3.0-7cross1 [68.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mips-cross all 8.3.0-7cross1 [6624 B] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-8-dev-mips-cross all 8.3.0-7cross1 [208 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-mips-linux-gnu amd64 8.3.0-7cross1 [6693 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mips-linux-gnu amd64 4:8.3.0-1 [1452 B] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mips-cross all 8.3.0-7cross1 [304 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mips-cross all 4.19.28-2cross2 [1240 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mips-cross all 2.28-10cross2 [2291 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-8-dev-mips-cross all 8.3.0-7cross1 [1519 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 g++-8-mips-linux-gnu amd64 8.3.0-7cross1 [6850 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mips-linux-gnu amd64 4:8.3.0-1 [1172 B] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.1-6 [8292 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.00+dfsg-1 [58.6 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1 [344 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.27-1 [66.8 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-2 [38.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-2 [49.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mips all 12.6 [6560 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 40.0 MB in 1s (63.9 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11942 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-3+b4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-3+b4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.35-4_amd64.deb ... Unpacking libmagic-mgc (1:5.35-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.35-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-4) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.35-4_amd64.deb ... Unpacking file (1:5.35-4) ... Selecting previously unselected package ucf. Preparing to unpack .../05-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... 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Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up file (1:5.35-4) ... Setting up libyaml-perl (1.27-1) ... Setting up libicu63:amd64 (63.1-6) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cross-config (2.6.15-2) ... Setting up gcc-8-mips-linux-gnu-base:amd64 (8.3.0-7cross1) ... Setting up cpp-8-mips-linux-gnu (8.3.0-7cross1) ... Setting up libc6-mips-cross (2.28-10cross2) ... Setting up linux-libc-dev-mips-cross (4.19.28-2cross2) ... Setting up sensible-utils (0.0.12) ... Setting up cpp-mips-linux-gnu (4:8.3.0-1) ... Setting up libc6-dev-mips-cross (2.28-10cross2) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up libgomp1-mips-cross (8.3.0-7cross1) ... Setting up libgcc1-mips-cross (1:8.3.0-7cross1) ... Setting up libatomic1-mips-cross (8.3.0-7cross1) ... Setting up libgcc-8-dev-mips-cross (8.3.0-7cross1) ... Setting up ucf (3.0038+nmu1) ... Setting up gcc-8-mips-linux-gnu (8.3.0-7cross1) ... Setting up libstdc++6-mips-cross (8.3.0-7cross1) ... Setting up libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-mips-linux-gnu (4:8.3.0-1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++-8-dev-mips-cross (8.3.0-7cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-8-mips-linux-gnu (8.3.0-7cross1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up g++-mips-linux-gnu (4:8.3.0-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-2) ... Setting up dpkg-cross (2.6.15-2) ... Setting up crossbuild-essential-mips (12.6) ... Setting up sbuild-build-depends-core-dummy:mips (0.invalid.0) ... Processing triggers for libc-bin (2.28-10) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mips included in any) Setup apt archive ----------------- dpkg-deb: building package 'sbuild-build-depends-essential-dummy' in '/<>/resolver-Pw1PMU/apt_archive/sbuild-build-depends-essential-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-Pw1PMU/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Pw1PMU/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-Pw1PMU/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Pw1PMU/apt_archive ./ Sources [480 B] Get:5 copy:/<>/resolver-Pw1PMU/apt_archive ./ Packages [570 B] Fetched 2013 B in 0s (109 kB/s) Reading package lists... Reading package lists... Install essential build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-essential-dummy:mips 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 840 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-Pw1PMU/apt_archive ./ sbuild-build-depends-essential-dummy 0.invalid.0 [840 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 840 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-essential-dummy:mips. (Reading database ... 15113 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-essential-dummy_0.invalid.0_mips.deb ... Unpacking sbuild-build-depends-essential-dummy:mips (0.invalid.0) ... Setting up sbuild-build-depends-essential-dummy:mips (0.invalid.0) ... +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), d-shlibs, libdisorder-dev Filtered Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), d-shlibs, libdisorder-dev dpkg-deb: building package 'sbuild-build-depends-libsmithwaterman-dummy' in '/<>/resolver-Pw1PMU/apt_archive/sbuild-build-depends-libsmithwaterman-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-libsmithwaterman-dummy dpkg-scanpackages: info: Wrote 3 entries to output Packages file. Ign:1 copy:/<>/resolver-Pw1PMU/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Pw1PMU/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-Pw1PMU/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Pw1PMU/apt_archive ./ Sources [655 B] Get:5 copy:/<>/resolver-Pw1PMU/apt_archive ./ Packages [736 B] Fetched 2354 B in 0s (119 kB/s) Reading package lists... Reading package lists... Install libsmithwaterman build dependencies (apt-based resolver) ---------------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:mips gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mips libbsd0 libc6:mips libc6-dev:mips libcroco3 libdisorder-dev:mips libdisorder0:mips libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:mips libgcc1:mips libglib2.0-0 libgomp1:mips libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:mips libstdc++6:mips libtool libuchardet0 linux-libc-dev:mips m4 man-db po-debconf Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:mips libc-l10n:mips locales:mips manpages-dev:mips libstdc++-8-doc:mips libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:mips libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpm2 libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:mips gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mips libbsd0 libc6:mips libc6-dev:mips libcroco3 libdisorder-dev:mips libdisorder0:mips libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:mips libgcc1:mips libglib2.0-0 libgomp1:mips libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:mips libstdc++6:mips libtool libuchardet0 linux-libc-dev:mips m4 man-db po-debconf sbuild-build-depends-libsmithwaterman-dummy:mips 0 upgraded, 41 newly installed, 0 to remove and 0 not upgraded. Need to get 17.9 MB of archives. After this operation, 79.3 MB of additional disk space will be used. Get:1 copy:/<>/resolver-Pw1PMU/apt_archive ./ sbuild-build-depends-libsmithwaterman-dummy 0.invalid.0 [896 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.9.1-2 [99.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 d-shlibs all 0.84 [17.2 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-10 [547 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1 [160 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.12-3 [78.0 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.58.3-1 [1258 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20181013-2 [102 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.1.1 [1016 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main mips gcc-8-base mips 8.3.0-7 [191 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main mips libgcc1 mips 1:8.3.0-7 [45.3 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main mips libc6 mips 2.28-10 [2387 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main mips libatomic1 mips 8.3.0-7 [6628 B] Get:34 http://debian.oregonstate.edu/debian unstable/main mips linux-libc-dev mips 4.19.37-1 [1178 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main mips libc6-dev mips 2.28-10 [2292 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main mips libdisorder0 mips 0.0.2+git20130809.8062ee1-1 [4436 B] Get:37 http://debian.oregonstate.edu/debian unstable/main mips libdisorder-dev mips 0.0.2+git20130809.8062ee1-1 [4408 B] Get:38 http://debian.oregonstate.edu/debian unstable/main mips libgomp1 mips 8.3.0-7 [70.0 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main mips libgcc-8-dev mips 8.3.0-7 [207 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main mips libstdc++6 mips 8.3.0-7 [342 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main mips libstdc++-8-dev mips 8.3.0-7 [1516 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 17.9 MB in 0s (40.5 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 15113 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.19.8.1-9_amd64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../07-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../08-m4_1.4.18-2_amd64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../09-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../10-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../11-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../12-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../13-d-shlibs_0.84_all.deb ... Unpacking d-shlibs (0.84) ... Selecting previously unselected package libtool. Preparing to unpack .../14-libtool_2.4.6-10_all.deb ... Unpacking libtool (2.4.6-10) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../15-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../16-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../17-libfile-stripnondeterminism-perl_1.1.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../18-dh-strip-nondeterminism_1.1.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.2-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../19-libelf1_0.176-1_amd64.deb ... Unpacking libelf1:amd64 (0.176-1) ... Selecting previously unselected package dwz. Preparing to unpack .../20-dwz_0.12-3_amd64.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../21-libglib2.0-0_2.58.3-1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.58.3-1) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../22-libcroco3_0.6.12-3_amd64.deb ... Unpacking libcroco3:amd64 (0.6.12-3) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../23-libncurses6_6.1+20181013-2_amd64.deb ... Unpacking libncurses6:amd64 (6.1+20181013-2) ... Selecting previously unselected package gettext. Preparing to unpack .../24-gettext_0.19.8.1-9_amd64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../25-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../26-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../27-debhelper_12.1.1_all.deb ... Unpacking debhelper (12.1.1) ... Selecting previously unselected package gcc-8-base:mips. Preparing to unpack .../28-gcc-8-base_8.3.0-7_mips.deb ... Unpacking gcc-8-base:mips (8.3.0-7) ... Selecting previously unselected package libgcc1:mips. Preparing to unpack .../29-libgcc1_1%3a8.3.0-7_mips.deb ... Unpacking libgcc1:mips (1:8.3.0-7) ... Selecting previously unselected package libc6:mips. Preparing to unpack .../30-libc6_2.28-10_mips.deb ... Unpacking libc6:mips (2.28-10) ... Selecting previously unselected package libatomic1:mips. Preparing to unpack .../31-libatomic1_8.3.0-7_mips.deb ... Unpacking libatomic1:mips (8.3.0-7) ... Selecting previously unselected package linux-libc-dev:mips. Preparing to unpack .../32-linux-libc-dev_4.19.37-1_mips.deb ... Unpacking linux-libc-dev:mips (4.19.37-1) ... Selecting previously unselected package libc6-dev:mips. Preparing to unpack .../33-libc6-dev_2.28-10_mips.deb ... Unpacking libc6-dev:mips (2.28-10) ... Selecting previously unselected package libdisorder0:mips. Preparing to unpack .../34-libdisorder0_0.0.2+git20130809.8062ee1-1_mips.deb ... Unpacking libdisorder0:mips (0.0.2+git20130809.8062ee1-1) ... Selecting previously unselected package libdisorder-dev:mips. Preparing to unpack .../35-libdisorder-dev_0.0.2+git20130809.8062ee1-1_mips.deb ... Unpacking libdisorder-dev:mips (0.0.2+git20130809.8062ee1-1) ... Selecting previously unselected package libgomp1:mips. Preparing to unpack .../36-libgomp1_8.3.0-7_mips.deb ... Unpacking libgomp1:mips (8.3.0-7) ... Selecting previously unselected package libgcc-8-dev:mips. Preparing to unpack .../37-libgcc-8-dev_8.3.0-7_mips.deb ... Unpacking libgcc-8-dev:mips (8.3.0-7) ... Selecting previously unselected package libstdc++6:mips. Preparing to unpack .../38-libstdc++6_8.3.0-7_mips.deb ... Unpacking libstdc++6:mips (8.3.0-7) ... Selecting previously unselected package libstdc++-8-dev:mips. Preparing to unpack .../39-libstdc++-8-dev_8.3.0-7_mips.deb ... Unpacking libstdc++-8-dev:mips (8.3.0-7) ... Selecting previously unselected package sbuild-build-depends-libsmithwaterman-dummy:mips. Preparing to unpack .../40-sbuild-build-depends-libsmithwaterman-dummy_0.invalid.0_mips.deb ... Unpacking sbuild-build-depends-libsmithwaterman-dummy:mips (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:amd64 (2.58.3-1) ... No schema files found: doing nothing. Setting up linux-libc-dev:mips (4.19.37-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up autotools-dev (20180224.1) ... Setting up libncurses6:amd64 (6.1+20181013-2) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up gcc-8-base:mips (8.3.0-7) ... Setting up autopoint (0.19.8.1-9) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up d-shlibs (0.84) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libbsd0:amd64 (0.9.1-2) ... Setting up libelf1:amd64 (0.176-1) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libtool (2.4.6-10) ... Setting up m4 (1.4.18-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libc6:mips (2.28-10) ... Setting up libc6-dev:mips (2.28-10) ... Setting up libdisorder0:mips (0.0.2+git20130809.8062ee1-1) ... Setting up libgcc1:mips (1:8.3.0-7) ... Setting up libgomp1:mips (8.3.0-7) ... Setting up dh-autoreconf (19) ... Setting up libatomic1:mips (8.3.0-7) ... Setting up libdisorder-dev:mips (0.0.2+git20130809.8062ee1-1) ... Setting up libgcc-8-dev:mips (8.3.0-7) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up libstdc++6:mips (8.3.0-7) ... Setting up libstdc++-8-dev:mips (8.3.0-7) ... Setting up debhelper (12.1.1) ... Setting up sbuild-build-depends-libsmithwaterman-dummy:mips (0.invalid.0) ... Processing triggers for libc-bin (2.28-10) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.31.1-16 dpkg-dev_1.19.6 g++-8_8.3.0-7 gcc-8_8.3.0-7 libc6-dev_2.28-10 libstdc++-8-dev_8.3.0-7 libstdc++-8-dev-mips-cross_8.3.0-7cross1 libstdc++6_8.3.0-7 libstdc++6-mips-cross_8.3.0-7cross1 linux-libc-dev_4.19.37-1 Package versions: adduser_3.118 apt_1.8.1 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.3 base-passwd_3.5.46 bash_5.0-4 binutils_2.31.1-16 binutils-common_2.31.1-16 binutils-mips-linux-gnu_2.31.1-16 binutils-x86-64-linux-gnu_2.31.1-16 bsdmainutils_11.1.2+b1 bsdutils_1:2.33.1-0.1 build-essential_12.6 bzip2_1.0.6-9 coreutils_8.30-3 cpp_4:8.3.0-1 cpp-8_8.3.0-7 cpp-8-mips-linux-gnu_8.3.0-7cross1 cpp-mips-linux-gnu_4:8.3.0-1 cross-config_2.6.15-2 crossbuild-essential-mips_12.6 d-shlibs_0.84 dash_0.5.10.2-5 debconf_1.5.72 debhelper_12.1.1 debian-archive-keyring_2019.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-strip-nondeterminism_1.1.2-1 diffutils_1:3.7-3 dpkg_1.19.6 dpkg-cross_2.6.15-2 dpkg-dev_1.19.6 dwz_0.12-3 e2fsprogs_1.45.1-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-4 findutils_4.6.0+git+20190209-2 g++_4:8.3.0-1 g++-8_8.3.0-7 g++-8-mips-linux-gnu_8.3.0-7cross1 g++-mips-linux-gnu_4:8.3.0-1 gcc_4:8.3.0-1 gcc-8_8.3.0-7 gcc-8-base_8.3.0-7 gcc-8-cross-base_8.3.0-7cross1 gcc-8-mips-linux-gnu_8.3.0-7cross1 gcc-8-mips-linux-gnu-base_8.3.0-7cross1 gcc-mips-linux-gnu_4:8.3.0-1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.13-2 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 hostname_3.21 init-system-helpers_1.56+nmu1 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-4 libapt-pkg5.0_1.8.1 libarchive-zip-perl_1.64-1 libasan5_8.3.0-7 libatomic1_8.3.0-7 libatomic1-mips-cross_8.3.0-7cross1 libattr1_1:2.4.48-4 libaudit-common_1:2.8.4-3 libaudit1_1:2.8.4-3 libbinutils_2.31.1-16 libblkid1_2.33.1-0.1 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9 libc-bin_2.28-10 libc-dev-bin_2.28-10 libc6_2.28-10 libc6-dev_2.28-10 libc6-dev-mips-cross_2.28-10cross2 libc6-mips-cross_2.28-10cross2 libcap-ng0_0.7.9-2 libcc1-0_8.3.0-7 libcom-err2_1.45.1-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.12-3 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.249 libdebian-dpkgcross-perl_2.6.15-2 libdisorder-dev_0.0.2+git20130809.8062ee1-1 libdisorder0_0.0.2+git20130809.8062ee1-1 libdpkg-perl_1.19.6 libelf1_0.176-1 libext2fs2_1.45.1-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.1.2-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-7 libgcc-8-dev-mips-cross_8.3.0-7cross1 libgcc1_1:8.3.0-7 libgcc1-mips-cross_1:8.3.0-7cross1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-4 libgdbm6_1.18.1-4 libglib2.0-0_2.58.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.7-2 libgomp1_8.3.0-7 libgomp1-mips-cross_8.3.0-7cross1 libgpg-error0_1.35-1 libhogweed4_3.4.1-1 libicu63_63.1-6 libidn2-0_2.0.5-1 libio-string-perl_1.08-3 libisl19_0.20-2 libitm1_8.3.0-7 liblocale-gettext-perl_1.07-3+b4 liblsan0_8.3.0-7 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-4 libmagic1_1:5.35-4 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-7 libncurses6_6.1+20181013-2 libncursesw6_6.1+20181013-2 libnettle6_3.4.1-1 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre3_2:8.39-12 libperl5.28_5.28.1-6 libpipeline1_1.5.1-2 libquadmath0_8.3.0-7 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libss2_1.45.1-1 libstdc++-8-dev_8.3.0-7 libstdc++-8-dev-mips-cross_8.3.0-7cross1 libstdc++6_8.3.0-7 libstdc++6-mips-cross_8.3.0-7cross1 libsystemd0_241-3 libtasn1-6_4.13-3 libtinfo6_6.1+20181013-2 libtool_2.4.6-10 libtsan0_8.3.0-7 libubsan1_8.3.0-7 libuchardet0_0.0.6-3 libudev1_241-3 libunistring2_0.9.10-1 libuuid1_2.33.1-0.1 libxml-libxml-perl_2.0134+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.00+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-perl_1.27-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.37-1 linux-libc-dev-mips-cross_4.19.28-2cross2 login_1:4.5-1.1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17+b3 mount_2.33.1-0.1 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-6 perl-base_5.28.1-6 perl-modules-5.28_5.28.1-6 po-debconf_1.0.21 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-essential-dummy_0.invalid.0 sbuild-build-depends-libsmithwaterman-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-8 tar_1.30+dfsg-6 tzdata_2019a-1 ucf_3.0038+nmu1 util-linux_2.33.1-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Mon Aug 13 11:21:26 2018 UTC gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libsmithwaterman_0.0+git20160702.2610e25-7.dsc dpkg-source: info: extracting libsmithwaterman in /<>/libsmithwaterman-0.0+git20160702.2610e25 dpkg-source: info: unpacking libsmithwaterman_0.0+git20160702.2610e25.orig.tar.xz dpkg-source: info: unpacking libsmithwaterman_0.0+git20160702.2610e25-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying autoconf.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mips DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-e8a1bac1-7188-4084-8ef6-01b7c3116fd4 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package libsmithwaterman dpkg-buildpackage: info: source version 0.0+git20160702.2610e25-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Graham Inggs dpkg-architecture: warning: specified GNU system type mips-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mips fakeroot debian/rules clean dh clean --no-parallel dh_clean debian/rules build-arch dh build-arch --no-parallel dh_update_autotools_config -a dh_autoreconf -a aclocal: warning: couldn't open directory 'config': No such file or directory libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'config'. libtoolize: copying file 'config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'config'. libtoolize: copying file 'config/libtool.m4' libtoolize: copying file 'config/ltoptions.m4' libtoolize: copying file 'config/ltsugar.m4' libtoolize: copying file 'config/ltversion.m4' libtoolize: copying file 'config/lt~obsolete.m4' libtoolize: Consider adding '-I config' to ACLOCAL_AMFLAGS in Makefile.am. configure.ac:30: installing 'config/compile' configure.ac:30: installing 'config/config.guess' configure.ac:30: installing 'config/config.sub' configure.ac:18: installing 'config/install-sh' configure.ac:18: installing 'config/missing' Makefile.am: installing 'config/depcomp' dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/mips-linux-gnu --libexecdir=\${prefix}/lib/mips-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=mips-linux-gnu configure: WARNING: unrecognized options: --disable-maintainer-mode configure: loading site script /etc/dpkg-cross/cross-config.mips checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for mips-linux-gnu-strip... mips-linux-gnu-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether UID '1003' is supported by ustar format... yes checking whether GID '1003' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking whether ln -s works... yes checking build system type... x86_64-pc-linux-gnu checking host system type... mips-unknown-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for mips-linux-gnu-gcc... mips-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether mips-linux-gnu-gcc accepts -g... yes checking for mips-linux-gnu-gcc option to accept ISO C89... none needed checking whether mips-linux-gnu-gcc understands -c and -o together... yes checking dependency style of mips-linux-gnu-gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by mips-linux-gnu-gcc... /usr/mips-linux-gnu/bin/ld checking if the linker (/usr/mips-linux-gnu/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/mips-linux-gnu-nm -B checking the name lister (/usr/bin/mips-linux-gnu-nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to mips-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/mips-linux-gnu/bin/ld option to reload object files... -r checking for mips-linux-gnu-objdump... mips-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for mips-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for mips-linux-gnu-ar... mips-linux-gnu-ar checking for archiver @FILE support... @ checking for mips-linux-gnu-strip... (cached) mips-linux-gnu-strip checking for mips-linux-gnu-ranlib... mips-linux-gnu-ranlib checking command to parse /usr/bin/mips-linux-gnu-nm -B output from mips-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mips-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... mips-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mips-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for mips-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if mips-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if mips-linux-gnu-gcc static flag -static works... yes checking if mips-linux-gnu-gcc supports -c -o file.o... yes checking if mips-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the mips-linux-gnu-gcc linker (/usr/mips-linux-gnu/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for mips-linux-gnu-g++... mips-linux-gnu-g++ checking whether we are using the GNU C++ compiler... yes checking whether mips-linux-gnu-g++ accepts -g... yes checking dependency style of mips-linux-gnu-g++... none checking how to run the C++ preprocessor... mips-linux-gnu-g++ -E checking for ld used by mips-linux-gnu-g++... /usr/mips-linux-gnu/bin/ld checking if the linker (/usr/mips-linux-gnu/bin/ld) is GNU ld... yes checking whether the mips-linux-gnu-g++ linker (/usr/mips-linux-gnu/bin/ld) supports shared libraries... yes checking for mips-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if mips-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if mips-linux-gnu-g++ static flag -static works... yes checking if mips-linux-gnu-g++ supports -c -o file.o... yes checking if mips-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the mips-linux-gnu-g++ linker (/usr/mips-linux-gnu/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate ./configure: line 11542: AX_CXXFLAGS: command not found checking for ANSI C header files... (cached) yes checking for stdlib.h... (cached) yes checking whether make sets $(MAKE)... (cached) yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating libsmithwaterman.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode dh_auto_build -a make -j1 make[1]: Entering directory '/<>/libsmithwaterman-0.0+git20160702.2610e25' make all-am make[2]: Entering directory '/<>/libsmithwaterman-0.0+git20160702.2610e25' mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/libsmithwaterman-0.0+git20160702.2610e25=. -fstack-protector-strong -Wformat -Werror=format-security -c -o smithwaterman.o smithwaterman.cpp /bin/bash ./libtool --tag=CXX --mode=compile mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/libsmithwaterman-0.0+git20160702.2610e25=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsmithwaterman_la-BandedSmithWaterman.lo `test -f 'BandedSmithWaterman.cpp' || echo './'`BandedSmithWaterman.cpp libtool: compile: mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/libsmithwaterman-0.0+git20160702.2610e25=. -fstack-protector-strong -Wformat -Werror=format-security -c BandedSmithWaterman.cpp -fPIC -DPIC -o .libs/libsmithwaterman_la-BandedSmithWaterman.o libtool: compile: mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/libsmithwaterman-0.0+git20160702.2610e25=. -fstack-protector-strong -Wformat -Werror=format-security -c BandedSmithWaterman.cpp -o libsmithwaterman_la-BandedSmithWaterman.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/libsmithwaterman-0.0+git20160702.2610e25=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsmithwaterman_la-IndelAllele.lo `test -f 'IndelAllele.cpp' || echo './'`IndelAllele.cpp libtool: compile: mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/libsmithwaterman-0.0+git20160702.2610e25=. -fstack-protector-strong -Wformat -Werror=format-security -c IndelAllele.cpp -fPIC -DPIC -o .libs/libsmithwaterman_la-IndelAllele.o libtool: compile: mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/libsmithwaterman-0.0+git20160702.2610e25=. -fstack-protector-strong -Wformat -Werror=format-security -c IndelAllele.cpp -o libsmithwaterman_la-IndelAllele.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/libsmithwaterman-0.0+git20160702.2610e25=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsmithwaterman_la-LeftAlign.lo `test -f 'LeftAlign.cpp' || echo './'`LeftAlign.cpp libtool: compile: mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/libsmithwaterman-0.0+git20160702.2610e25=. -fstack-protector-strong -Wformat -Werror=format-security -c LeftAlign.cpp -fPIC -DPIC -o .libs/libsmithwaterman_la-LeftAlign.o libtool: compile: mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/libsmithwaterman-0.0+git20160702.2610e25=. -fstack-protector-strong -Wformat -Werror=format-security -c LeftAlign.cpp -o libsmithwaterman_la-LeftAlign.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/libsmithwaterman-0.0+git20160702.2610e25=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsmithwaterman_la-Repeats.lo `test -f 'Repeats.cpp' || echo './'`Repeats.cpp libtool: compile: mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/libsmithwaterman-0.0+git20160702.2610e25=. -fstack-protector-strong -Wformat -Werror=format-security -c Repeats.cpp -fPIC -DPIC -o .libs/libsmithwaterman_la-Repeats.o libtool: compile: mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/libsmithwaterman-0.0+git20160702.2610e25=. -fstack-protector-strong -Wformat -Werror=format-security -c Repeats.cpp -o libsmithwaterman_la-Repeats.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=compile mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/libsmithwaterman-0.0+git20160702.2610e25=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsmithwaterman_la-SmithWatermanGotoh.lo `test -f 'SmithWatermanGotoh.cpp' || echo './'`SmithWatermanGotoh.cpp libtool: compile: mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/libsmithwaterman-0.0+git20160702.2610e25=. -fstack-protector-strong -Wformat -Werror=format-security -c SmithWatermanGotoh.cpp -fPIC -DPIC -o .libs/libsmithwaterman_la-SmithWatermanGotoh.o libtool: compile: mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/libsmithwaterman-0.0+git20160702.2610e25=. -fstack-protector-strong -Wformat -Werror=format-security -c SmithWatermanGotoh.cpp -o libsmithwaterman_la-SmithWatermanGotoh.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CXX --mode=link mips-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/libsmithwaterman-0.0+git20160702.2610e25=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 0:0 -Wl,-z,relro -Wl,-z,now -o libsmithwaterman.la -rpath /usr/lib/mips-linux-gnu libsmithwaterman_la-BandedSmithWaterman.lo libsmithwaterman_la-IndelAllele.lo libsmithwaterman_la-LeftAlign.lo libsmithwaterman_la-Repeats.lo libsmithwaterman_la-SmithWatermanGotoh.lo libtool: link: mips-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc-cross/mips-linux-gnu/8/../../../../mips-linux-gnu/lib/../lib/crti.o /usr/lib/gcc-cross/mips-linux-gnu/8/crtbeginS.o .libs/libsmithwaterman_la-BandedSmithWaterman.o .libs/libsmithwaterman_la-IndelAllele.o .libs/libsmithwaterman_la-LeftAlign.o .libs/libsmithwaterman_la-Repeats.o .libs/libsmithwaterman_la-SmithWatermanGotoh.o -L/usr/lib/gcc-cross/mips-linux-gnu/8 -L/usr/lib/gcc-cross/mips-linux-gnu/8/../../../../mips-linux-gnu/lib/../lib -L/lib/mips-linux-gnu -L/lib/../lib -L/usr/lib/mips-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc-cross/mips-linux-gnu/8/../../../../mips-linux-gnu/lib -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc-cross/mips-linux-gnu/8/crtendS.o /usr/lib/gcc-cross/mips-linux-gnu/8/../../../../mips-linux-gnu/lib/../lib/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libsmithwaterman.so.0 -o .libs/libsmithwaterman.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libsmithwaterman.so.0" && ln -s "libsmithwaterman.so.0.0.0" "libsmithwaterman.so.0") libtool: link: (cd ".libs" && rm -f "libsmithwaterman.so" && ln -s "libsmithwaterman.so.0.0.0" "libsmithwaterman.so") libtool: link: mips-linux-gnu-ar cru .libs/libsmithwaterman.a libsmithwaterman_la-BandedSmithWaterman.o libsmithwaterman_la-IndelAllele.o libsmithwaterman_la-LeftAlign.o libsmithwaterman_la-Repeats.o libsmithwaterman_la-SmithWatermanGotoh.o mips-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: mips-linux-gnu-ranlib .libs/libsmithwaterman.a libtool: link: ( cd ".libs" && rm -f "libsmithwaterman.la" && ln -s "../libsmithwaterman.la" "libsmithwaterman.la" ) /bin/bash ./libtool --tag=CXX --mode=link mips-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/libsmithwaterman-0.0+git20160702.2610e25=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o smithwaterman smithwaterman.o libsmithwaterman.la -ldisorder libtool: link: mips-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/libsmithwaterman-0.0+git20160702.2610e25=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/smithwaterman smithwaterman.o ./.libs/libsmithwaterman.so -ldisorder make[2]: Leaving directory '/<>/libsmithwaterman-0.0+git20160702.2610e25' make[1]: Leaving directory '/<>/libsmithwaterman-0.0+git20160702.2610e25' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --no-parallel dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/libsmithwaterman-0.0\+git20160702.2610e25/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>/libsmithwaterman-0.0+git20160702.2610e25' make[2]: Entering directory '/<>/libsmithwaterman-0.0+git20160702.2610e25' /bin/mkdir -p '/<>/libsmithwaterman-0.0+git20160702.2610e25/debian/tmp/usr/lib/mips-linux-gnu' /bin/bash ./libtool --mode=install /usr/bin/install -c libsmithwaterman.la '/<>/libsmithwaterman-0.0+git20160702.2610e25/debian/tmp/usr/lib/mips-linux-gnu' libtool: install: /usr/bin/install -c .libs/libsmithwaterman.so.0.0.0 /<>/libsmithwaterman-0.0+git20160702.2610e25/debian/tmp/usr/lib/mips-linux-gnu/libsmithwaterman.so.0.0.0 libtool: install: (cd /<>/libsmithwaterman-0.0+git20160702.2610e25/debian/tmp/usr/lib/mips-linux-gnu && { ln -s -f libsmithwaterman.so.0.0.0 libsmithwaterman.so.0 || { rm -f libsmithwaterman.so.0 && ln -s libsmithwaterman.so.0.0.0 libsmithwaterman.so.0; }; }) libtool: install: (cd /<>/libsmithwaterman-0.0+git20160702.2610e25/debian/tmp/usr/lib/mips-linux-gnu && { ln -s -f libsmithwaterman.so.0.0.0 libsmithwaterman.so || { rm -f libsmithwaterman.so && ln -s libsmithwaterman.so.0.0.0 libsmithwaterman.so; }; }) libtool: install: /usr/bin/install -c .libs/libsmithwaterman.lai /<>/libsmithwaterman-0.0+git20160702.2610e25/debian/tmp/usr/lib/mips-linux-gnu/libsmithwaterman.la libtool: install: /usr/bin/install -c .libs/libsmithwaterman.a /<>/libsmithwaterman-0.0+git20160702.2610e25/debian/tmp/usr/lib/mips-linux-gnu/libsmithwaterman.a libtool: install: chmod 644 /<>/libsmithwaterman-0.0+git20160702.2610e25/debian/tmp/usr/lib/mips-linux-gnu/libsmithwaterman.a libtool: install: mips-linux-gnu-ranlib /<>/libsmithwaterman-0.0+git20160702.2610e25/debian/tmp/usr/lib/mips-linux-gnu/libsmithwaterman.a libtool: warning: remember to run 'libtool --finish /usr/lib/mips-linux-gnu' /bin/mkdir -p '/<>/libsmithwaterman-0.0+git20160702.2610e25/debian/tmp/usr/bin' /bin/bash ./libtool --mode=install /usr/bin/install -c smithwaterman '/<>/libsmithwaterman-0.0+git20160702.2610e25/debian/tmp/usr/bin' libtool: warning: 'libsmithwaterman.la' has not been installed in '/usr/lib/mips-linux-gnu' libtool: install: /usr/bin/install -c .libs/smithwaterman /<>/libsmithwaterman-0.0+git20160702.2610e25/debian/tmp/usr/bin/smithwaterman /bin/mkdir -p '/<>/libsmithwaterman-0.0+git20160702.2610e25/debian/tmp/usr/include/smithwaterman' /usr/bin/install -c -m 644 BandedSmithWaterman.h IndelAllele.h LeftAlign.h Mosaik.h Repeats.h SmithWatermanGotoh.h convert.h '/<>/libsmithwaterman-0.0+git20160702.2610e25/debian/tmp/usr/include/smithwaterman' /bin/mkdir -p '/<>/libsmithwaterman-0.0+git20160702.2610e25/debian/tmp/usr/lib/mips-linux-gnu/pkgconfig' /usr/bin/install -c -m 644 libsmithwaterman.pc '/<>/libsmithwaterman-0.0+git20160702.2610e25/debian/tmp/usr/lib/mips-linux-gnu/pkgconfig' make[2]: Leaving directory '/<>/libsmithwaterman-0.0+git20160702.2610e25' make[1]: Leaving directory '/<>/libsmithwaterman-0.0+git20160702.2610e25' debian/rules override_dh_install make[1]: Entering directory '/<>/libsmithwaterman-0.0+git20160702.2610e25' dh_install d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/tmp/usr/include/* usr/include \ --movedev "debian/tmp/usr/lib/*/pkgconfig/*.pc" usr/lib/mips-linux-gnu/pkgconfig \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility set -e install -d -m 755 debian/libsmithwaterman-dev/usr/lib/mips-linux-gnu install -d -m 755 debian/libsmithwaterman0/usr/lib/mips-linux-gnu mv debian/tmp/usr/lib/mips-linux-gnu/libsmithwaterman.a debian/libsmithwaterman-dev/usr/lib/mips-linux-gnu mv debian/tmp/usr/lib/mips-linux-gnu/libsmithwaterman.so debian/libsmithwaterman-dev/usr/lib/mips-linux-gnu mv /<>/libsmithwaterman-0.0+git20160702.2610e25/debian/tmp/usr/lib/mips-linux-gnu/libsmithwaterman.so.0 debian/libsmithwaterman0/usr/lib/mips-linux-gnu mv /<>/libsmithwaterman-0.0+git20160702.2610e25/debian/tmp/usr/lib/mips-linux-gnu/libsmithwaterman.so.0.0.0 debian/libsmithwaterman0/usr/lib/mips-linux-gnu PKGDEV=libsmithwaterman-dev PKGSHL=libsmithwaterman0 install -d -m 755 debian/libsmithwaterman-dev/usr/include mv debian/tmp/usr/include/smithwaterman debian/libsmithwaterman-dev/usr/include install -d -m 755 debian/libsmithwaterman-dev/usr/lib/mips-linux-gnu/pkgconfig mv debian/tmp/usr/lib/*/pkgconfig/*.pc debian/libsmithwaterman-dev/usr/lib/mips-linux-gnu/pkgconfig make[1]: Leaving directory '/<>/libsmithwaterman-0.0+git20160702.2610e25' dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_strip -a dh_makeshlibs -a dpkg-gensymbols: warning: debian/libsmithwaterman0/DEBIAN/symbols doesn't match completely debian/libsmithwaterman0.symbols --- debian/libsmithwaterman0.symbols (libsmithwaterman0_0.0+git20160702.2610e25-7_mips) +++ dpkg-gensymbolspBTYKW 2019-05-14 23:58:01.650332127 +0000 @@ -72,9 +72,9 @@ (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE12_M_erase_auxESt23_Rb_tree_const_iteratorIS8_E@Base 0.0+git20160702.2610e25 (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS7_EESJ_IJEEEEESt17_Rb_tree_iteratorIS8_ESt23_Rb_tree_const_iteratorIS8_EDpOT_@Base 0.0+git20160702.2610e25 _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE24_M_get_insert_unique_posERS7_@Base 0.0+git20160702.2610e25 - (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_@Base 0.0+git20160702.2610e25 +#MISSING: 0.0+git20160702.2610e25-7# (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_@Base 0.0+git20160702.2610e25 _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE8_M_eraseEPSt13_Rb_tree_nodeIS8_E@Base 0.0+git20160702.2610e25 - (optional)_ZSteqIcEN9__gnu_cxx11__enable_ifIXsrSt9__is_charIT_E7__valueEbE6__typeERKNSt7__cxx1112basic_stringIS3_St11char_traitsIS3_ESaIS3_EEESE_@Base 0.0+git20160702.2610e25 +#MISSING: 0.0+git20160702.2610e25-7# (optional)_ZSteqIcEN9__gnu_cxx11__enable_ifIXsrSt9__is_charIT_E7__valueEbE6__typeERKNSt7__cxx1112basic_stringIS3_St11char_traitsIS3_ESaIS3_EEESE_@Base 0.0+git20160702.2610e25 _ZeqRK11IndelAlleleS1_@Base 0.0+git20160702.2610e25 _ZlsRSoRK11IndelAllele@Base 0.0+git20160702.2610e25 _ZltRK11IndelAlleleS1_@Base 0.0+git20160702.2610e25 dh_shlibdeps -a dpkg-shlibdeps: warning: symbol shannon_H used by debian/libsmithwaterman0/usr/lib/mips-linux-gnu/libsmithwaterman.so.0.0.0 found in none of the libraries dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/smithwaterman/usr/bin/smithwaterman was not linked against libdisorder.so.0 (it uses none of the library's symbols) dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: Depends field of package libsmithwaterman-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'libsmithwaterman0' in '../libsmithwaterman0_0.0+git20160702.2610e25-7_mips.deb'. dpkg-deb: building package 'libsmithwaterman0-dbgsym' in '../libsmithwaterman0-dbgsym_0.0+git20160702.2610e25-7_mips.deb'. dpkg-deb: building package 'libsmithwaterman-dev' in '../libsmithwaterman-dev_0.0+git20160702.2610e25-7_mips.deb'. dpkg-deb: building package 'smithwaterman' in '../smithwaterman_0.0+git20160702.2610e25-7_mips.deb'. dpkg-deb: building package 'smithwaterman-dbgsym' in '../smithwaterman-dbgsym_0.0+git20160702.2610e25-7_mips.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../libsmithwaterman_0.0+git20160702.2610e25-7_mips.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-05-14T23:58:06Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/resolver-Pw1PMU/apt_archive/sbuild-build-depends-lintian-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-libsmithwaterman-dummy sbuild-build-depends-lintian-dummy dpkg-scanpackages: info: Wrote 4 entries to output Packages file. Ign:1 copy:/<>/resolver-Pw1PMU/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Pw1PMU/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-Pw1PMU/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Pw1PMU/apt_archive ./ Sources [775 B] Get:5 copy:/<>/resolver-Pw1PMU/apt_archive ./ Packages [848 B] Fetched 2586 B in 0s (150 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libdata-dump-perl ca-certificates libhtml-template-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libunicode-utf8-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:mips t1utils 0 upgraded, 48 newly installed, 0 to remove and 0 not upgraded. Need to get 7761 kB of archives. After this operation, 20.7 MB of additional disk space will be used. Get:1 copy:/<>/resolver-Pw1PMU/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 5.6 [19.4 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 7.0-5 [70.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.62-1 [33.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.2-1 [49.4 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.13-2 [512 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.27.2-2 [640 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.13-2 [866 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.34+b1 [71.2 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.40-1 [222 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.21-1+b3 [13.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.41-1+b1 [14.6 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1b-2 [1530 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 3 [6782 B] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.85-2+b1 [308 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.060-3 [207 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.18-1 [88.5 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.19-1 [372 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.39-1 [74.5 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.72-1 [262 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b5 [33.7 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-1 [101 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b4 [64.2 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libparse-debianchangelog-perl all 1.2.0-13 [59.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.76+repack-1 [33.1 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2 [90.4 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.13.0 [1175 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7761 kB in 0s (38.9 MB/s) Selecting previously unselected package netbase. (Reading database ... 17835 files and directories currently installed.) Preparing to unpack .../00-netbase_5.6_all.deb ... Unpacking netbase (5.6) ... Selecting previously unselected package readline-common. Preparing to unpack .../01-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.62-1_amd64.deb ... Unpacking diffstat (1.62-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.2-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.2-1) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../04-libreadline7_7.0-5_amd64.deb ... Unpacking libreadline7:amd64 (7.0-5) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.13-2_amd64.deb ... Unpacking gpgconf (2.2.13-2) ... Selecting previously unselected package libsqlite3-0:amd64. 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Setting up gpgconf (2.2.13-2) ... Setting up libio-socket-ssl-perl (2.060-3) ... Setting up gpg (2.2.13-2) ... Setting up libcgi-pm-perl (4.40-1) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmailtools-perl (2.18-1) ... Setting up libparse-debianchangelog-perl (1.2.0-13) ... Setting up libemail-valid-perl (1.202-1) ... Setting up lintian (2.13.0) ... Setting up sbuild-build-depends-lintian-dummy:mips (0.invalid.0) ... Processing triggers for man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.28-10) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libsmithwaterman_0.0+git20160702.2610e25-7_mips.changes: -------------------------------------------------------- Format: 1.8 Date: Mon, 13 Aug 2018 11:16:53 +0000 Source: libsmithwaterman Binary: libsmithwaterman-dev libsmithwaterman0 libsmithwaterman0-dbgsym smithwaterman smithwaterman-dbgsym Built-For-Profiles: cross nocheck Architecture: mips Version: 0.0+git20160702.2610e25-7 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Graham Inggs Description: libsmithwaterman-dev - determine similar regions between two strings or genomic sequence libsmithwaterman0 - determine similar regions between two strings or genomic sequence smithwaterman - determine similar regions between two strings or genomic sequence Changes: libsmithwaterman 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libsmithwaterman_0.0+git20160702.2610e25-7_mips.buildinfo a87f039acb56e2bac51acc5ef0169683 70712 debug optional smithwaterman-dbgsym_0.0+git20160702.2610e25-7_mips.deb 3584c4d75a539b6febe419ac8d0efa8e 10308 science optional smithwaterman_0.0+git20160702.2610e25-7_mips.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: libsmithwaterman Binary: libsmithwaterman0 libsmithwaterman-dev smithwaterman Architecture: mips Version: 0.0+git20160702.2610e25-7 Checksums-Md5: 77459fc1f51b213fcda4f77739f3a7de 39780 libsmithwaterman-dev_0.0+git20160702.2610e25-7_mips.deb e3d378e52c815f5dadf9f7945cef8bc4 420368 libsmithwaterman0-dbgsym_0.0+git20160702.2610e25-7_mips.deb b7ff83b63c02b2b3990d0c43113bcd8f 32832 libsmithwaterman0_0.0+git20160702.2610e25-7_mips.deb a87f039acb56e2bac51acc5ef0169683 70712 smithwaterman-dbgsym_0.0+git20160702.2610e25-7_mips.deb 3584c4d75a539b6febe419ac8d0efa8e 10308 smithwaterman_0.0+git20160702.2610e25-7_mips.deb Checksums-Sha1: 2e83967d0822a900dff3f67b87cd507421b366b4 39780 libsmithwaterman-dev_0.0+git20160702.2610e25-7_mips.deb 6f5223100ba5d3cf7be37f0b3ac0d74500d1a0f0 420368 libsmithwaterman0-dbgsym_0.0+git20160702.2610e25-7_mips.deb 556b87193da3aa0342aa907e4d2d40cdf1784e92 32832 libsmithwaterman0_0.0+git20160702.2610e25-7_mips.deb 4a6a0a0050a4b7de2b8ab7dfd33bc155a7dfcd44 70712 smithwaterman-dbgsym_0.0+git20160702.2610e25-7_mips.deb 8ead4c3bab1cb72b224e2350d62151c4d8566864 10308 smithwaterman_0.0+git20160702.2610e25-7_mips.deb Checksums-Sha256: 36d4bff7dc4047d781a722f43f1eccbc926875406069afb01fec68f604fe01db 39780 libsmithwaterman-dev_0.0+git20160702.2610e25-7_mips.deb 207cf915de10be7226799ec7a19f7a44e09fcbae943854680163fa3571522711 420368 libsmithwaterman0-dbgsym_0.0+git20160702.2610e25-7_mips.deb 0d240834437bda82192c3bfcaef9ce05c4b1143b5ea228c64913f06cedc6489b 32832 libsmithwaterman0_0.0+git20160702.2610e25-7_mips.deb 488679d82b172dc195be7957bedb656882c2e800d4dd26b90b34ab8d29354b43 70712 smithwaterman-dbgsym_0.0+git20160702.2610e25-7_mips.deb 29fd08b3e4f7b9cdb7a300d39e858ed6757627bae8a023caf35920c259038d48 10308 smithwaterman_0.0+git20160702.2610e25-7_mips.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Tue, 14 May 2019 23:58:06 +0000 Build-Path: /<>/libsmithwaterman-0.0+git20160702.2610e25 Installed-Build-Depends: adduser (= 3.118), apt (= 1.8.1), autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 10.3), base-passwd (= 3.5.46), bash (= 5.0-4), binutils (= 2.31.1-16), binutils-common (= 2.31.1-16), binutils-x86-64-linux-gnu (= 2.31.1-16), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.33.1-0.1), build-essential (= 12.6), bzip2 (= 1.0.6-9), coreutils (= 8.30-3), cpp (= 4:8.3.0-1), cpp-8 (= 8.3.0-7), d-shlibs (= 0.84), dash (= 0.5.10.2-5), debconf (= 1.5.72), debhelper (= 12.1.1), debian-archive-keyring (= 2019.1), debianutils (= 4.8.6.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.1.2-1), diffutils (= 1:3.7-3), dpkg (= 1.19.6), dpkg-dev (= 1.19.6), dwz (= 0.12-3), fdisk (= 2.33.1-0.1), file (= 1:5.35-4), findutils (= 4.6.0+git+20190209-2), g++ (= 4:8.3.0-1), g++-8 (= 8.3.0-7), gcc (= 4:8.3.0-1), gcc-8 (= 8.3.0-7), gcc-8-base (= 8.3.0-7), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), gpgv (= 2.2.13-2), grep (= 3.3-1), groff-base (= 1.22.4-3), gzip (= 1.9-3), hostname (= 3.21), init-system-helpers (= 1.56+nmu1), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-4), libapt-pkg5.0 (= 1.8.1), libarchive-zip-perl (= 1.64-1), libasan5 (= 8.3.0-7), libatomic1 (= 8.3.0-7), libattr1 (= 1:2.4.48-4), libaudit-common (= 1:2.8.4-3), libaudit1 (= 1:2.8.4-3), libbinutils (= 2.31.1-16), libblkid1 (= 2.33.1-0.1), libbsd0 (= 0.9.1-2), libbz2-1.0 (= 1.0.6-9), libc-bin (= 2.28-10), libc-dev-bin (= 2.28-10), libc6 (= 2.28-10), libc6-dev (= 2.28-10), libcap-ng0 (= 0.7.9-2), libcc1-0 (= 8.3.0-7), libcroco3 (= 0.6.12-3), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.249), libdisorder-dev (= 0.0.2+git20130809.8062ee1-1), libdisorder0 (= 0.0.2+git20130809.8062ee1-1), libdpkg-perl (= 1.19.6), libelf1 (= 0.176-1), libfdisk1 (= 2.33.1-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.1.2-1), libgcc-8-dev (= 8.3.0-7), libgcc1 (= 1:8.3.0-7), libgcrypt20 (= 1.8.4-5), libgdbm-compat4 (= 1.18.1-4), libgdbm6 (= 1.18.1-4), libglib2.0-0 (= 2.58.3-1), libgmp10 (= 2:6.1.2+dfsg-4), libgnutls30 (= 3.6.7-2), libgomp1 (= 8.3.0-7), libgpg-error0 (= 1.35-1), libhogweed4 (= 3.4.1-1), libicu63 (= 63.1-6), libidn2-0 (= 2.0.5-1), libisl19 (= 0.20-2), libitm1 (= 8.3.0-7), liblsan0 (= 8.3.0-7), liblz4-1 (= 1.8.3-1), liblzma5 (= 5.2.4-1), libmagic-mgc (= 1:5.35-4), libmagic1 (= 1:5.35-4), libmount1 (= 2.33.1-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-7), libncurses6 (= 6.1+20181013-2), libncursesw6 (= 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6.1+20181013-2), passwd (= 1:4.5-1.1), patch (= 2.7.6-3), perl (= 5.28.1-6), perl-base (= 5.28.1-6), perl-modules-5.28 (= 5.28.1-6), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.93-8), tar (= 1.30+dfsg-6), util-linux (= 2.33.1-0.1), xz-utils (= 5.2.4-1), zlib1g (= 1:1.2.11.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="POSIX" SOURCE_DATE_EPOCH="1534159013" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libsmithwaterman-dev_0.0+git20160702.2610e25-7_mips.deb ------------------------------------------------------- new Debian package, version 2.0. size 39780 bytes: control archive=1136 bytes. 881 bytes, 19 lines control 849 bytes, 11 lines md5sums Package: libsmithwaterman-dev Source: libsmithwaterman Version: 0.0+git20160702.2610e25-7 Architecture: mips Maintainer: Debian Med Packaging Team Installed-Size: 157 Depends: libsmithwaterman0 (= 0.0+git20160702.2610e25-7), libdisorder-dev Section: libdevel Priority: optional Homepage: https://github.com/ekg/smithwaterman Description: determine similar regions between two strings or genomic sequences (devel) The Smith–Waterman algorithm performs local sequence alignment; that is, for determining similar regions between two strings or nucleotide or protein sequences. Instead of looking at the total sequence, the Smith–Waterman algorithm compares segments of all possible lengths and optimizes the similarity measure. . This is the development package containing the statically linked library and the header files. drwxr-xr-x root/root 0 2018-08-13 11:16 ./ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/include/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/include/smithwaterman/ -rw-r--r-- root/root 4545 2018-08-13 11:16 ./usr/include/smithwaterman/BandedSmithWaterman.h -rw-r--r-- root/root 1040 2018-08-13 11:16 ./usr/include/smithwaterman/IndelAllele.h -rw-r--r-- root/root 882 2018-08-13 11:16 ./usr/include/smithwaterman/LeftAlign.h -rw-r--r-- root/root 1716 2018-08-13 11:16 ./usr/include/smithwaterman/Mosaik.h -rw-r--r-- root/root 211 2018-08-13 11:16 ./usr/include/smithwaterman/Repeats.h -rw-r--r-- root/root 3970 2018-08-13 11:16 ./usr/include/smithwaterman/SmithWatermanGotoh.h -rw-r--r-- root/root 470 2018-08-13 11:16 ./usr/include/smithwaterman/convert.h drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/lib/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/lib/mips-linux-gnu/ -rw-r--r-- root/root 126994 2018-08-13 11:16 ./usr/lib/mips-linux-gnu/libsmithwaterman.a lrwxrwxrwx root/root 0 2018-08-13 11:16 ./usr/lib/mips-linux-gnu/libsmithwaterman.so -> libsmithwaterman.so.0.0.0 drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/lib/mips-linux-gnu/pkgconfig/ -rw-r--r-- root/root 264 2018-08-13 11:16 ./usr/lib/mips-linux-gnu/pkgconfig/libsmithwaterman.pc drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/share/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/share/doc/libsmithwaterman-dev/ -rw-r--r-- root/root 929 2018-08-13 11:16 ./usr/share/doc/libsmithwaterman-dev/changelog.Debian.gz -rw-r--r-- root/root 1416 2018-08-06 09:58 ./usr/share/doc/libsmithwaterman-dev/copyright libsmithwaterman0-dbgsym_0.0+git20160702.2610e25-7_mips.deb ----------------------------------------------------------- new Debian package, version 2.0. size 420368 bytes: control archive=560 bytes. 444 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: libsmithwaterman0-dbgsym Source: libsmithwaterman Version: 0.0+git20160702.2610e25-7 Auto-Built-Package: debug-symbols Architecture: mips Maintainer: Debian Med Packaging Team Installed-Size: 432 Depends: libsmithwaterman0 (= 0.0+git20160702.2610e25-7) Section: debug Priority: optional Description: debug symbols for libsmithwaterman0 Build-Ids: 18f7df5277cacb96e7b475f0177433ffdf6694e0 drwxr-xr-x root/root 0 2018-08-13 11:16 ./ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/lib/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/lib/debug/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/lib/debug/.build-id/18/ -rw-r--r-- root/root 431848 2018-08-13 11:16 ./usr/lib/debug/.build-id/18/f7df5277cacb96e7b475f0177433ffdf6694e0.debug drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/share/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/share/doc/ lrwxrwxrwx root/root 0 2018-08-13 11:16 ./usr/share/doc/libsmithwaterman0-dbgsym -> libsmithwaterman0 libsmithwaterman0_0.0+git20160702.2610e25-7_mips.deb ---------------------------------------------------- new Debian package, version 2.0. size 32832 bytes: control archive=2112 bytes. 810 bytes, 18 lines control 317 bytes, 4 lines md5sums 37 bytes, 1 lines shlibs 7974 bytes, 79 lines symbols 67 bytes, 2 lines triggers Package: libsmithwaterman0 Source: libsmithwaterman Version: 0.0+git20160702.2610e25-7 Architecture: mips Maintainer: Debian Med Packaging Team Installed-Size: 105 Depends: libc6 (>= 2.4), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2) Section: libs Priority: optional Homepage: https://github.com/ekg/smithwaterman Description: determine similar regions between two strings or genomic sequences (lib) The Smith–Waterman algorithm performs local sequence alignment; that is, for determining similar regions between two strings or nucleotide or protein sequences. Instead of looking at the total sequence, the Smith–Waterman algorithm compares segments of all possible lengths and optimizes the similarity measure. . This package contains the dynamic library. drwxr-xr-x root/root 0 2018-08-13 11:16 ./ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/lib/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/lib/mips-linux-gnu/ lrwxrwxrwx root/root 0 2018-08-13 11:16 ./usr/lib/mips-linux-gnu/libsmithwaterman.so.0 -> libsmithwaterman.so.0.0.0 -rw-r--r-- root/root 81868 2018-08-13 11:16 ./usr/lib/mips-linux-gnu/libsmithwaterman.so.0.0.0 drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/share/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/share/doc/libsmithwaterman0/ -rw-r--r-- root/root 929 2018-08-13 11:16 ./usr/share/doc/libsmithwaterman0/changelog.Debian.gz -rw-r--r-- root/root 1416 2018-08-06 09:58 ./usr/share/doc/libsmithwaterman0/copyright drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/share/man/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/share/man/man1/ -rw-r--r-- root/root 831 2018-08-13 11:16 ./usr/share/man/man1/smithwaterman.1.gz smithwaterman-dbgsym_0.0+git20160702.2610e25-7_mips.deb ------------------------------------------------------- new Debian package, version 2.0. size 70712 bytes: control archive=552 bytes. 431 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: smithwaterman-dbgsym Source: libsmithwaterman Version: 0.0+git20160702.2610e25-7 Auto-Built-Package: debug-symbols Architecture: mips Maintainer: Debian Med Packaging Team Installed-Size: 84 Depends: smithwaterman (= 0.0+git20160702.2610e25-7) Section: debug Priority: optional Description: debug symbols for smithwaterman Build-Ids: 222f7da72afe4f951309d205e16dd2716059335b drwxr-xr-x root/root 0 2018-08-13 11:16 ./ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/lib/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/lib/debug/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/lib/debug/.build-id/22/ -rw-r--r-- root/root 75256 2018-08-13 11:16 ./usr/lib/debug/.build-id/22/2f7da72afe4f951309d205e16dd2716059335b.debug drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/share/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/share/doc/ lrwxrwxrwx root/root 0 2018-08-13 11:16 ./usr/share/doc/smithwaterman-dbgsym -> smithwaterman smithwaterman_0.0+git20160702.2610e25-7_mips.deb ------------------------------------------------ new Debian package, version 2.0. size 10308 bytes: control archive=828 bytes. 828 bytes, 16 lines control 210 bytes, 3 lines md5sums Package: smithwaterman Source: libsmithwaterman Version: 0.0+git20160702.2610e25-7 Architecture: mips Maintainer: Debian Med Packaging Team Installed-Size: 33 Depends: libc6 (>= 2.4), libdisorder0 (>= 0.0.2), libgcc1 (>= 1:3.0), libsmithwaterman0 (>= 0.0+git20160702.2610e25), libstdc++6 (>= 5.2) Section: science Priority: optional Homepage: https://github.com/ekg/smithwaterman Description: determine similar regions between two strings or genomic sequences The Smith–Waterman algorithm performs local sequence alignment; that is, for determining similar regions between two strings or nucleotide or protein sequences. Instead of looking at the total sequence, the Smith–Waterman algorithm compares segments of all possible lengths and optimizes the similarity measure. drwxr-xr-x root/root 0 2018-08-13 11:16 ./ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/bin/ -rwxr-xr-x root/root 23116 2018-08-13 11:16 ./usr/bin/smithwaterman drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/share/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-08-13 11:16 ./usr/share/doc/smithwaterman/ -rw-r--r-- root/root 929 2018-08-13 11:16 ./usr/share/doc/smithwaterman/changelog.Debian.gz -rw-r--r-- root/root 1416 2018-08-06 09:58 ./usr/share/doc/smithwaterman/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 14996 Build-Time: 43 Distribution: unstable Foreign Architectures: mips Host Architecture: mips Install-Time: 24 Job: libsmithwaterman_0.0+git20160702.2610e25-7 Lintian: pass Machine Architecture: amd64 Package: libsmithwaterman Package-Time: 78 Source-Version: 0.0+git20160702.2610e25-7 Space: 14996 Status: successful Version: 0.0+git20160702.2610e25-7 -------------------------------------------------------------------------------- Finished at 2019-05-14T23:58:06Z Build needed 00:01:18, 14996k disk space