sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org

+==============================================================================+
| macromoleculebuilder 3.2+dfsg-1 (arm64)      Mon, 28 Sep 2020 21:46:57 +0000 |
+==============================================================================+

Package: macromoleculebuilder
Version: 3.2+dfsg-1
Source Version: 3.2+dfsg-1
Distribution: unstable
Machine Architecture: amd64
Host Architecture: arm64
Build Architecture: amd64
Build Profiles: cross nocheck
Build Type: any

I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-cfa099b1-6c28-409c-ae24-27f69cb33a07' with '<<CHROOT>>'
I: NOTICE: Log filtering will replace 'build/macromoleculebuilder-gKSm5D/resolver-fpA9qT' with '<<RESOLVERDIR>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB]
Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB]
Ign:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index
Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB]
Ign:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index
Get:4 http://debian.oregonstate.edu/debian unstable/main arm64 Packages [8251 kB]
Get:5 http://debian.oregonstate.edu/debian unstable/main Sources [8868 kB]
Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 Packages [8400 kB]
Fetched 25.7 MB in 4s (6684 kB/s)
Reading package lists...
Reading package lists...
Building dependency tree...
Reading state information...
Calculating upgrade...
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'macromoleculebuilder' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/debichem-team/macromoleculebuilder.git
Please use:
git clone https://salsa.debian.org/debichem-team/macromoleculebuilder.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 2479 kB of source archives.
Get:1 http://debian.oregonstate.edu/debian unstable/main macromoleculebuilder 3.2+dfsg-1 (dsc) [2321 B]
Get:2 http://debian.oregonstate.edu/debian unstable/main macromoleculebuilder 3.2+dfsg-1 (tar) [2474 kB]
Get:3 http://debian.oregonstate.edu/debian unstable/main macromoleculebuilder 3.2+dfsg-1 (diff) [2844 B]
Fetched 2479 kB in 0s (25.6 MB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/macromoleculebuilder-gKSm5D/macromoleculebuilder-3.2+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/macromoleculebuilder-gKSm5D' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: asciidoc-base, cmake, debhelper-compat (= 12), libopenmm-dev, libseqan2-dev, libsimbody-dev, libsimtkmolmodel-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64
Filtered Build-Depends: asciidoc-base, cmake, debhelper-compat (= 12), libopenmm-dev, libseqan2-dev, libsimbody-dev, libsimtkmolmodel-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [957 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [443 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [531 B]
Fetched 1931 B in 0s (75.8 kB/s)
Reading package lists...
Reading package lists...

Install main build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  asciidoc-base asciidoc-common autoconf automake autopoint autotools-dev
  binutils-aarch64-linux-gnu bsdextrautils build-essential cmake cmake-data
  cpp-10-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config
  crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism
  dpkg-cross dpkg-dev dwz file freeglut3:arm64 freeglut3-dev:arm64 g++ g++-10
  g++-10-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-10-aarch64-linux-gnu
  gcc-10-aarch64-linux-gnu-base gcc-10-base:arm64 gcc-10-cross-base
  gcc-9-base:arm64 gcc-aarch64-linux-gnu gettext gettext-base groff-base
  intltool-debian libarchive-zip-perl libarchive13 libasan5:arm64
  libasan6-arm64-cross libatomic1:arm64 libatomic1-arm64-cross
  libblas-dev:arm64 libblas3:arm64 libbrotli1 libbsd0 libbsd0:arm64
  libc6:arm64 libc6-arm64-cross libc6-dev libc6-dev:arm64
  libc6-dev-arm64-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3
  libcrypt-dev libcrypt-dev:arm64 libcrypt1:arm64 libcurl4 libdebhelper-perl
  libdebian-dpkgcross-perl libdpkg-perl libdrm-amdgpu1:arm64 libdrm-common
  libdrm-nouveau2:arm64 libdrm-radeon1:arm64 libdrm2:arm64 libedit2:arm64
  libegl-dev:arm64 libegl-mesa0:arm64 libegl1:arm64 libelf1 libelf1:arm64
  libexpat1 libexpat1:arm64 libffi7:arm64 libfile-homedir-perl
  libfile-stripnondeterminism-perl libfile-which-perl libgbm1:arm64
  libgcc-10-dev-arm64-cross libgcc-9-dev:arm64 libgcc-s1:arm64
  libgcc-s1-arm64-cross libgfortran5:arm64 libgl-dev:arm64 libgl1:arm64
  libgl1-mesa-dev:arm64 libgl1-mesa-dri:arm64 libglapi-mesa:arm64
  libgles-dev:arm64 libgles1:arm64 libgles2:arm64 libglib2.0-0
  libglu1-mesa:arm64 libglu1-mesa-dev:arm64 libglvnd-dev:arm64 libglvnd0:arm64
  libglx-dev:arm64 libglx-mesa0:arm64 libglx0:arm64 libgomp1:arm64
  libgomp1-arm64-cross libgssapi-krb5-2 libice-dev:arm64 libice6:arm64
  libicu67 libio-string-perl libitm1:arm64 libitm1-arm64-cross libjsoncpp1
  libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev:arm64
  liblapack3:arm64 libldap-2.4-2 libllvm10:arm64 liblocale-gettext-perl
  liblsan0:arm64 liblsan0-arm64-cross libmagic-mgc libmagic1 libmmdb2-0:arm64
  libncurses6 libnghttp2-14 libopengl-dev:arm64 libopengl0:arm64
  libopenmm-dev:arm64 libopenmm7.5:arm64 libperl5.30 libpipeline1 libprocps8
  libpsl5 libpthread-stubs0-dev libpthread-stubs0-dev:arm64 libpython3-stdlib
  libpython3.8-minimal libpython3.8-stdlib libreadline8 librhash0 librtmp1
  libsasl2-2 libsasl2-modules-db libsensors-config libsensors5:arm64
  libseqan2-dev libsigsegv2 libsimbody-dev:arm64 libsimbody3.6:arm64
  libsimtkmolmodel-dev:arm64 libsimtkmolmodel3.0:arm64 libsm-dev:arm64
  libsm6:arm64 libsqlite3-0 libssh2-1 libssl1.1 libstdc++-10-dev
  libstdc++-10-dev-arm64-cross libstdc++-9-dev:arm64 libstdc++6:arm64
  libstdc++6-arm64-cross libsub-override-perl libtinfo6:arm64 libtool
  libtsan0:arm64 libtsan0-arm64-cross libubsan1:arm64 libubsan1-arm64-cross
  libuchardet0 libuuid1:arm64 libuv1 libwayland-client0:arm64
  libwayland-server0:arm64 libx11-6 libx11-6:arm64 libx11-data libx11-dev
  libx11-dev:arm64 libx11-xcb1:arm64 libxau-dev libxau-dev:arm64 libxau6
  libxau6:arm64 libxcb-dri2-0:arm64 libxcb-dri3-0:arm64 libxcb-glx0:arm64
  libxcb-present0:arm64 libxcb-sync1:arm64 libxcb-xfixes0:arm64 libxcb1
  libxcb1:arm64 libxcb1-dev libxcb1-dev:arm64 libxdamage1:arm64 libxdmcp-dev
  libxdmcp-dev:arm64 libxdmcp6 libxdmcp6:arm64 libxext-dev:arm64
  libxext6:arm64 libxfixes-dev:arm64 libxfixes3:arm64 libxi-dev:arm64
  libxi6:arm64 libxml-libxml-perl libxml-namespacesupport-perl
  libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2
  libxml2-utils libxmu-dev:arm64 libxmu-headers libxmu6:arm64
  libxshmfence1:arm64 libxslt1.1 libxt-dev:arm64 libxt6:arm64
  libxxf86vm1:arm64 libyaml-perl libz3-4:arm64 libzstd1:arm64
  linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db mime-support perl
  perl-modules-5.30 po-debconf procps python3 python3-minimal python3.8
  python3.8-minimal readline-common sensible-utils ucf x11-common
  x11proto-core-dev x11proto-dev x11proto-input-dev x11proto-xext-dev
  xorg-sgml-doctools xsltproc xtrans-dev zlib1g:arm64
Suggested packages:
  asciidoc-doc docbook-utils source-highlight autoconf-archive gnu-standards
  autoconf-doc binutils-doc cmake-doc ninja-build gcc-10-locales cpp-doc
  dh-make binutils-multiarch debian-keyring g++-multilib g++-10-multilib
  gcc-10-doc manpages-dev flex bison gdb-aarch64-linux-gnu gcc-doc gettext-doc
  libasprintf-dev libgettextpo-dev groff lrzip liblapack-doc:arm64
  glibc-doc:arm64 libc-l10n:arm64 locales:arm64 glibc-doc manpages-dev:arm64
  gnupg git bzr krb5-doc krb5-user libice-doc:arm64 lm-sensors
  lm-sensors:arm64 libsm-doc:arm64 libstdc++-10-doc libstdc++-9-doc:arm64
  libtool-doc gfortran | fortran95-compiler gcj-jdk libx11-doc
  libx11-doc:arm64 libxcb-doc libxcb-doc:arm64 libxext-doc:arm64
  libxt-doc:arm64 libyaml-shell-perl m4-doc apparmor less www-browser perl-doc
  libterm-readline-gnu-perl | libterm-readline-perl-perl
  libtap-harness-archive-perl libmail-box-perl python3-doc python3-tk
  python3-venv python3.8-venv python3.8-doc binfmt-support readline-doc
Recommended packages:
  xmlto gnupg libalgorithm-merge-perl curl | wget | lynx libidn2-0:arm64
  ca-certificates libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data
  shared-mime-info xdg-user-dirs krb5-locales libldap-common libgpm2
  publicsuffix libsasl2-modules libltdl-dev uuid-runtime:arm64 libwww-perl
  libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase
  libmail-sendmail-perl psmisc
The following NEW packages will be installed:
  asciidoc-base asciidoc-common autoconf automake autopoint autotools-dev
  binutils-aarch64-linux-gnu bsdextrautils build-essential cmake cmake-data
  cpp-10-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config
  crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism
  dpkg-cross dpkg-dev dwz file freeglut3:arm64 freeglut3-dev:arm64 g++ g++-10
  g++-10-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-10-aarch64-linux-gnu
  gcc-10-aarch64-linux-gnu-base gcc-10-base:arm64 gcc-10-cross-base
  gcc-9-base:arm64 gcc-aarch64-linux-gnu gettext gettext-base groff-base
  intltool-debian libarchive-zip-perl libarchive13 libasan5:arm64
  libasan6-arm64-cross libatomic1:arm64 libatomic1-arm64-cross
  libblas-dev:arm64 libblas3:arm64 libbrotli1 libbsd0 libbsd0:arm64
  libc6:arm64 libc6-arm64-cross libc6-dev libc6-dev:arm64
  libc6-dev-arm64-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3
  libcrypt-dev libcrypt-dev:arm64 libcrypt1:arm64 libcurl4 libdebhelper-perl
  libdebian-dpkgcross-perl libdpkg-perl libdrm-amdgpu1:arm64 libdrm-common
  libdrm-nouveau2:arm64 libdrm-radeon1:arm64 libdrm2:arm64 libedit2:arm64
  libegl-dev:arm64 libegl-mesa0:arm64 libegl1:arm64 libelf1 libelf1:arm64
  libexpat1 libexpat1:arm64 libffi7:arm64 libfile-homedir-perl
  libfile-stripnondeterminism-perl libfile-which-perl libgbm1:arm64
  libgcc-10-dev-arm64-cross libgcc-9-dev:arm64 libgcc-s1:arm64
  libgcc-s1-arm64-cross libgfortran5:arm64 libgl-dev:arm64 libgl1:arm64
  libgl1-mesa-dev:arm64 libgl1-mesa-dri:arm64 libglapi-mesa:arm64
  libgles-dev:arm64 libgles1:arm64 libgles2:arm64 libglib2.0-0
  libglu1-mesa:arm64 libglu1-mesa-dev:arm64 libglvnd-dev:arm64 libglvnd0:arm64
  libglx-dev:arm64 libglx-mesa0:arm64 libglx0:arm64 libgomp1:arm64
  libgomp1-arm64-cross libgssapi-krb5-2 libice-dev:arm64 libice6:arm64
  libicu67 libio-string-perl libitm1:arm64 libitm1-arm64-cross libjsoncpp1
  libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev:arm64
  liblapack3:arm64 libldap-2.4-2 libllvm10:arm64 liblocale-gettext-perl
  liblsan0:arm64 liblsan0-arm64-cross libmagic-mgc libmagic1 libmmdb2-0:arm64
  libncurses6 libnghttp2-14 libopengl-dev:arm64 libopengl0:arm64
  libopenmm-dev:arm64 libopenmm7.5:arm64 libperl5.30 libpipeline1 libprocps8
  libpsl5 libpthread-stubs0-dev libpthread-stubs0-dev:arm64 libpython3-stdlib
  libpython3.8-minimal libpython3.8-stdlib libreadline8 librhash0 librtmp1
  libsasl2-2 libsasl2-modules-db libsensors-config libsensors5:arm64
  libseqan2-dev libsigsegv2 libsimbody-dev:arm64 libsimbody3.6:arm64
  libsimtkmolmodel-dev:arm64 libsimtkmolmodel3.0:arm64 libsm-dev:arm64
  libsm6:arm64 libsqlite3-0 libssh2-1 libssl1.1 libstdc++-10-dev
  libstdc++-10-dev-arm64-cross libstdc++-9-dev:arm64 libstdc++6:arm64
  libstdc++6-arm64-cross libsub-override-perl libtinfo6:arm64 libtool
  libtsan0:arm64 libtsan0-arm64-cross libubsan1:arm64 libubsan1-arm64-cross
  libuchardet0 libuuid1:arm64 libuv1 libwayland-client0:arm64
  libwayland-server0:arm64 libx11-6 libx11-6:arm64 libx11-data libx11-dev
  libx11-dev:arm64 libx11-xcb1:arm64 libxau-dev libxau-dev:arm64 libxau6
  libxau6:arm64 libxcb-dri2-0:arm64 libxcb-dri3-0:arm64 libxcb-glx0:arm64
  libxcb-present0:arm64 libxcb-sync1:arm64 libxcb-xfixes0:arm64 libxcb1
  libxcb1:arm64 libxcb1-dev libxcb1-dev:arm64 libxdamage1:arm64 libxdmcp-dev
  libxdmcp-dev:arm64 libxdmcp6 libxdmcp6:arm64 libxext-dev:arm64
  libxext6:arm64 libxfixes-dev:arm64 libxfixes3:arm64 libxi-dev:arm64
  libxi6:arm64 libxml-libxml-perl libxml-namespacesupport-perl
  libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2
  libxml2-utils libxmu-dev:arm64 libxmu-headers libxmu6:arm64
  libxshmfence1:arm64 libxslt1.1 libxt-dev:arm64 libxt6:arm64
  libxxf86vm1:arm64 libyaml-perl libz3-4:arm64 libzstd1:arm64
  linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db mime-support perl
  perl-modules-5.30 po-debconf procps python3 python3-minimal python3.8
  python3.8-minimal readline-common sbuild-build-depends-main-dummy:arm64
  sensible-utils ucf x11-common x11proto-core-dev x11proto-dev
  x11proto-input-dev x11proto-xext-dev xorg-sgml-doctools xsltproc xtrans-dev
  zlib1g:arm64
0 upgraded, 252 newly installed, 0 to remove and 0 not upgraded.
Need to get 169 MB of archives.
After this operation, 714 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [956 B]
Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.36-3+b1 [140 kB]
Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB]
Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-5 [920 kB]
Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB]
Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.3-2 [1314 kB]
Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.30 all 5.30.3-4 [2806 kB]
Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.30 amd64 5.30.3-4 [4019 kB]
Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.30.3-4 [290 kB]
Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB]
Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1g-1 [1543 kB]
Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.8-minimal amd64 3.8.6-1 [761 kB]
Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.2.9-1 [94.3 kB]
Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 python3.8-minimal amd64 3.8.6-1 [1863 kB]
Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 python3-minimal amd64 3.8.2-3 [37.6 kB]
Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 mime-support all 3.64 [37.8 kB]
Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-4 [72.5 kB]
Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-4 [160 kB]
Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.33.0-1 [790 kB]
Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.8-stdlib amd64 3.8.6-1 [1720 kB]
Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 python3.8 amd64 3.8.6-1 [422 kB]
Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3-stdlib amd64 3.8.2-3 [20.8 kB]
Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 python3 amd64 3.8.2-3 [63.7 kB]
Get:24 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-10-base arm64 10.2.0-11 [199 kB]
Get:25 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-9-base arm64 9.3.0-18 [197 kB]
Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.2+20200918-1 [102 kB]
Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libprocps8 amd64 2:3.3.16-5 [62.7 kB]
Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 procps amd64 2:3.3.16-5 [262 kB]
Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-5 [262 kB]
Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-5 [120 kB]
Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-5 [67.9 kB]
Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB]
Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB]
Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 asciidoc-common all 9.0.0~rc2-1 [286 kB]
Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-4 [8624 kB]
Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-6 [692 kB]
Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2-utils amd64 2.9.10+dfsg-6 [108 kB]
Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libxslt1.1 amd64 1.1.34-4 [239 kB]
Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 xsltproc amd64 1.1.34-4 [124 kB]
Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 asciidoc-base all 9.0.0~rc2-1 [135 kB]
Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB]
Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB]
Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB]
Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB]
Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.2-4 [801 kB]
Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB]
Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-aarch64-linux-gnu amd64 2.35.1-1 [2804 kB]
Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.17-1 [104 kB]
Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.31-3 [2395 kB]
Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev amd64 10.2.0-11 [1737 kB]
Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10 amd64 10.2.0-11 [8668 kB]
Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:10.2.0-1 [1644 B]
Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.5 [1473 kB]
Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.5 [1909 kB]
Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B]
Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 cmake-data all 3.18.2-1 [1725 kB]
Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive13 amd64 3.4.3-2 [342 kB]
Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libbrotli1 amd64 1.0.9-2 [287 kB]
Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5support0 amd64 1.17-10 [64.6 kB]
Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libk5crypto3 amd64 1.17-10 [115 kB]
Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libkeyutils1 amd64 1.6.1-2 [15.4 kB]
Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5-3 amd64 1.17-10 [366 kB]
Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.17-10 [156 kB]
Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2 [69.0 kB]
Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2 [106 kB]
Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-2.4-2 amd64 2.4.53+dfsg-1 [231 kB]
Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libnghttp2-14 amd64 1.41.0-3 [74.0 kB]
Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libpsl5 amd64 0.21.0-1.1 [55.3 kB]
Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB]
Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libssh2-1 amd64 1.8.0-2.1 [140 kB]
Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libcurl4 amd64 7.72.0-1 [336 kB]
Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3.1 [77.6 kB]
Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 librhash0 amd64 1.4.0-1 [124 kB]
Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libuv1 amd64 1.39.0-1 [131 kB]
Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 cmake amd64 3.18.2-1 [5596 kB]
Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-aarch64-linux-gnu-base amd64 10.2.0-9cross1 [199 kB]
Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-10-aarch64-linux-gnu amd64 10.2.0-9cross1 [7820 kB]
Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-aarch64-linux-gnu amd64 4:10.2.0-1 [16.8 kB]
Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3.1 [39.9 kB]
Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10.2.0-9cross1 [195 kB]
Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-arm64-cross all 2.31-1cross2 [1260 kB]
Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-arm64-cross all 10.2.0-9cross1 [34.5 kB]
Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-arm64-cross all 10.2.0-9cross1 [89.6 kB]
Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-arm64-cross all 10.2.0-9cross1 [23.3 kB]
Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-arm64-cross all 10.2.0-9cross1 [9240 B]
Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-arm64-cross all 10.2.0-9cross1 [298 kB]
Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0-arm64-cross all 10.2.0-9cross1 [125 kB]
Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0-arm64-cross all 10.2.0-9cross1 [285 kB]
Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-arm64-cross all 10.2.0-9cross1 [411 kB]
Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-arm64-cross all 10.2.0-9cross1 [122 kB]
Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-10-dev-arm64-cross all 10.2.0-9cross1 [880 kB]
Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-aarch64-linux-gnu amd64 10.2.0-9cross1 [15.6 MB]
Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-aarch64-linux-gnu amd64 4:10.2.0-1 [1456 B]
Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-arm64-cross all 5.7.6-1cross2 [1208 kB]
Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-arm64-cross all 2.31-1cross2 [2067 kB]
Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev-arm64-cross all 10.2.0-9cross1 [1678 kB]
Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10-aarch64-linux-gnu amd64 10.2.0-9cross1 [8478 kB]
Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 g++-aarch64-linux-gnu amd64 4:10.2.0-1 [1176 B]
Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB]
Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB]
Get:102 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB]
Get:103 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB]
Get:104 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB]
Get:105 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB]
Get:106 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB]
Get:107 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB]
Get:108 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB]
Get:109 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB]
Get:110 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB]
Get:111 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3.1 [38.9 kB]
Get:112 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3.1 [49.9 kB]
Get:113 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-arm64 all 12.8 [6644 B]
Get:114 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB]
Get:115 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB]
Get:116 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.2.1 [188 kB]
Get:117 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB]
Get:118 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB]
Get:119 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB]
Get:120 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.9.0-1 [15.2 kB]
Get:121 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.181-1 [164 kB]
Get:122 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB]
Get:123 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.66.0-2 [1361 kB]
Get:124 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB]
Get:125 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB]
Get:126 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:127 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB]
Get:128 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.2.1 [1007 kB]
Get:129 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc-s1 arm64 10.2.0-11 [34.5 kB]
Get:130 http://debian.oregonstate.edu/debian unstable/main arm64 libcrypt1 arm64 1:4.4.17-1 [89.3 kB]
Get:131 http://debian.oregonstate.edu/debian unstable/main arm64 libc6 arm64 2.31-3 [2491 kB]
Get:132 http://debian.oregonstate.edu/debian unstable/main arm64 libglvnd0 arm64 1.3.2-1 [44.3 kB]
Get:133 http://debian.oregonstate.edu/debian unstable/main arm64 libxau6 arm64 1:1.0.8-1+b2 [19.3 kB]
Get:134 http://debian.oregonstate.edu/debian unstable/main arm64 libbsd0 arm64 0.10.0-1 [105 kB]
Get:135 http://debian.oregonstate.edu/debian unstable/main arm64 libxdmcp6 arm64 1:1.1.2-3 [25.4 kB]
Get:136 http://debian.oregonstate.edu/debian unstable/main arm64 libxcb1 arm64 1.14-2 [137 kB]
Get:137 http://debian.oregonstate.edu/debian unstable/main amd64 libx11-data all 2:1.6.12-1 [311 kB]
Get:138 http://debian.oregonstate.edu/debian unstable/main arm64 libx11-6 arm64 2:1.6.12-1 [749 kB]
Get:139 http://debian.oregonstate.edu/debian unstable/main amd64 libdrm-common all 2.4.102-1 [14.5 kB]
Get:140 http://debian.oregonstate.edu/debian unstable/main arm64 libdrm2 arm64 2.4.102-1 [41.4 kB]
Get:141 http://debian.oregonstate.edu/debian unstable/main arm64 libexpat1 arm64 2.2.9-1 [81.6 kB]
Get:142 http://debian.oregonstate.edu/debian unstable/main arm64 libglapi-mesa arm64 20.1.8-1 [80.3 kB]
Get:143 http://debian.oregonstate.edu/debian unstable/main arm64 libx11-xcb1 arm64 2:1.6.12-1 [203 kB]
Get:144 http://debian.oregonstate.edu/debian unstable/main arm64 libxcb-dri2-0 arm64 1.14-2 [103 kB]
Get:145 http://debian.oregonstate.edu/debian unstable/main arm64 libxcb-dri3-0 arm64 1.14-2 [102 kB]
Get:146 http://debian.oregonstate.edu/debian unstable/main arm64 libxcb-glx0 arm64 1.14-2 [118 kB]
Get:147 http://debian.oregonstate.edu/debian unstable/main arm64 libxcb-present0 arm64 1.14-2 [101 kB]
Get:148 http://debian.oregonstate.edu/debian unstable/main arm64 libxcb-sync1 arm64 1.14-2 [105 kB]
Get:149 http://debian.oregonstate.edu/debian unstable/main arm64 libxdamage1 arm64 1:1.1.5-2 [15.7 kB]
Get:150 http://debian.oregonstate.edu/debian unstable/main arm64 libxext6 arm64 2:1.3.3-1+b2 [48.6 kB]
Get:151 http://debian.oregonstate.edu/debian unstable/main arm64 libxfixes3 arm64 1:5.0.3-2 [22.1 kB]
Get:152 http://debian.oregonstate.edu/debian unstable/main arm64 libxshmfence1 arm64 1.3-1 [8712 B]
Get:153 http://debian.oregonstate.edu/debian unstable/main arm64 libxxf86vm1 arm64 1:1.1.4-1+b2 [20.1 kB]
Get:154 http://debian.oregonstate.edu/debian unstable/main arm64 libdrm-amdgpu1 arm64 2.4.102-1 [27.9 kB]
Get:155 http://debian.oregonstate.edu/debian unstable/main arm64 libdrm-nouveau2 arm64 2.4.102-1 [25.9 kB]
Get:156 http://debian.oregonstate.edu/debian unstable/main arm64 libdrm-radeon1 arm64 2.4.102-1 [28.9 kB]
Get:157 http://debian.oregonstate.edu/debian unstable/main arm64 zlib1g arm64 1:1.2.11.dfsg-2 [87.9 kB]
Get:158 http://debian.oregonstate.edu/debian unstable/main arm64 libelf1 arm64 0.181-1 [164 kB]
Get:159 http://debian.oregonstate.edu/debian unstable/main arm64 libtinfo6 arm64 6.2+20200918-1 [334 kB]
Get:160 http://debian.oregonstate.edu/debian unstable/main arm64 libedit2 arm64 3.1-20191231-1 [91.3 kB]
Get:161 http://debian.oregonstate.edu/debian unstable/main arm64 libffi7 arm64 3.3-4 [20.5 kB]
Get:162 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++6 arm64 10.2.0-11 [451 kB]
Get:163 http://debian.oregonstate.edu/debian unstable/main arm64 libz3-4 arm64 4.8.9-1 [5989 kB]
Get:164 http://debian.oregonstate.edu/debian unstable/main arm64 libllvm10 arm64 1:10.0.1-6 [13.7 MB]
Get:165 http://debian.oregonstate.edu/debian unstable/main amd64 libsensors-config all 1:3.6.0-2 [32.0 kB]
Get:166 http://debian.oregonstate.edu/debian unstable/main arm64 libsensors5 arm64 1:3.6.0-2 [52.2 kB]
Get:167 http://debian.oregonstate.edu/debian unstable/main arm64 libzstd1 arm64 1.4.5+dfsg-4 [284 kB]
Get:168 http://debian.oregonstate.edu/debian unstable/main arm64 libgl1-mesa-dri arm64 20.1.8-1 [6426 kB]
Get:169 http://debian.oregonstate.edu/debian unstable/main arm64 libglx-mesa0 arm64 20.1.8-1 [187 kB]
Get:170 http://debian.oregonstate.edu/debian unstable/main arm64 libglx0 arm64 1.3.2-1 [32.0 kB]
Get:171 http://debian.oregonstate.edu/debian unstable/main arm64 libgl1 arm64 1.3.2-1 [91.4 kB]
Get:172 http://debian.oregonstate.edu/debian unstable/main arm64 libxi6 arm64 2:1.7.10-1 [81.7 kB]
Get:173 http://debian.oregonstate.edu/debian unstable/main arm64 freeglut3 arm64 2.8.1-6 [119 kB]
Get:174 http://debian.oregonstate.edu/debian unstable/main amd64 xorg-sgml-doctools all 1:1.11-1 [21.9 kB]
Get:175 http://debian.oregonstate.edu/debian unstable/main amd64 x11proto-dev all 2020.1-1 [594 kB]
Get:176 http://debian.oregonstate.edu/debian unstable/main amd64 x11proto-core-dev all 2020.1-1 [3404 B]
Get:177 http://debian.oregonstate.edu/debian unstable/main arm64 libxau-dev arm64 1:1.0.8-1+b2 [22.8 kB]
Get:178 http://debian.oregonstate.edu/debian unstable/main arm64 libxdmcp-dev arm64 1:1.1.2-3 [41.2 kB]
Get:179 http://debian.oregonstate.edu/debian unstable/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB]
Get:180 http://debian.oregonstate.edu/debian unstable/main arm64 libpthread-stubs0-dev arm64 0.4-1 [5336 B]
Get:181 http://debian.oregonstate.edu/debian unstable/main arm64 libxcb1-dev arm64 1.14-2 [177 kB]
Get:182 http://debian.oregonstate.edu/debian unstable/main arm64 libx11-dev arm64 2:1.6.12-1 [832 kB]
Get:183 http://debian.oregonstate.edu/debian unstable/main arm64 libglx-dev arm64 1.3.2-1 [16.3 kB]
Get:184 http://debian.oregonstate.edu/debian unstable/main arm64 libgl-dev arm64 1.3.2-1 [100 kB]
Get:185 http://debian.oregonstate.edu/debian unstable/main arm64 libwayland-server0 arm64 1.18.0-2~exp1.1 [33.7 kB]
Get:186 http://debian.oregonstate.edu/debian unstable/main arm64 libgbm1 arm64 20.1.8-1 [74.7 kB]
Get:187 http://debian.oregonstate.edu/debian unstable/main arm64 libwayland-client0 arm64 1.18.0-2~exp1.1 [26.5 kB]
Get:188 http://debian.oregonstate.edu/debian unstable/main arm64 libxcb-xfixes0 arm64 1.14-2 [105 kB]
Get:189 http://debian.oregonstate.edu/debian unstable/main arm64 libegl-mesa0 arm64 20.1.8-1 [137 kB]
Get:190 http://debian.oregonstate.edu/debian unstable/main arm64 libegl1 arm64 1.3.2-1 [34.4 kB]
Get:191 http://debian.oregonstate.edu/debian unstable/main arm64 libegl-dev arm64 1.3.2-1 [19.6 kB]
Get:192 http://debian.oregonstate.edu/debian unstable/main arm64 libgles1 arm64 1.3.2-1 [13.0 kB]
Get:193 http://debian.oregonstate.edu/debian unstable/main arm64 libgles2 arm64 1.3.2-1 [18.4 kB]
Get:194 http://debian.oregonstate.edu/debian unstable/main arm64 libgles-dev arm64 1.3.2-1 [50.3 kB]
Get:195 http://debian.oregonstate.edu/debian unstable/main arm64 libopengl0 arm64 1.3.2-1 [32.4 kB]
Get:196 http://debian.oregonstate.edu/debian unstable/main arm64 libopengl-dev arm64 1.3.2-1 [5872 B]
Get:197 http://debian.oregonstate.edu/debian unstable/main arm64 libglvnd-dev arm64 1.3.2-1 [13.9 kB]
Get:198 http://debian.oregonstate.edu/debian unstable/main arm64 libgl1-mesa-dev arm64 20.1.8-1 [50.2 kB]
Get:199 http://debian.oregonstate.edu/debian unstable/main arm64 libglu1-mesa arm64 9.0.1-1 [146 kB]
Get:200 http://debian.oregonstate.edu/debian unstable/main arm64 libglu1-mesa-dev arm64 9.0.1-1 [186 kB]
Get:201 http://debian.oregonstate.edu/debian unstable/main amd64 x11proto-xext-dev all 2020.1-1 [3404 B]
Get:202 http://debian.oregonstate.edu/debian unstable/main arm64 libxext-dev arm64 2:1.3.3-1+b2 [104 kB]
Get:203 http://debian.oregonstate.edu/debian unstable/main amd64 x11-common all 1:7.7+20 [252 kB]
Get:204 http://debian.oregonstate.edu/debian unstable/main arm64 libice6 arm64 2:1.0.10-1 [55.6 kB]
Get:205 http://debian.oregonstate.edu/debian unstable/main arm64 libuuid1 arm64 2.36-3+b1 [82.3 kB]
Get:206 http://debian.oregonstate.edu/debian unstable/main arm64 libsm6 arm64 2:1.2.3-1 [34.0 kB]
Get:207 http://debian.oregonstate.edu/debian unstable/main arm64 libxt6 arm64 1:1.2.0-1 [176 kB]
Get:208 http://debian.oregonstate.edu/debian unstable/main arm64 libice-dev arm64 2:1.0.10-1 [66.0 kB]
Get:209 http://debian.oregonstate.edu/debian unstable/main arm64 libsm-dev arm64 2:1.2.3-1 [37.4 kB]
Get:210 http://debian.oregonstate.edu/debian unstable/main arm64 libxt-dev arm64 1:1.2.0-1 [406 kB]
Get:211 http://debian.oregonstate.edu/debian unstable/main arm64 freeglut3-dev arm64 2.8.1-6 [176 kB]
Get:212 http://debian.oregonstate.edu/debian unstable/main arm64 libasan5 arm64 9.3.0-18 [354 kB]
Get:213 http://debian.oregonstate.edu/debian unstable/main arm64 libatomic1 arm64 10.2.0-11 [9468 B]
Get:214 http://debian.oregonstate.edu/debian unstable/main arm64 libblas3 arm64 3.9.0-3 [101 kB]
Get:215 http://debian.oregonstate.edu/debian unstable/main arm64 libblas-dev arm64 3.9.0-3 [107 kB]
Get:216 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB]
Get:217 http://debian.oregonstate.edu/debian unstable/main arm64 linux-libc-dev arm64 5.8.10-1 [1161 kB]
Get:218 http://debian.oregonstate.edu/debian unstable/main arm64 libcrypt-dev arm64 1:4.4.17-1 [109 kB]
Get:219 http://debian.oregonstate.edu/debian unstable/main arm64 libc6-dev arm64 2.31-3 [2079 kB]
Get:220 http://debian.oregonstate.edu/debian unstable/main arm64 libgomp1 arm64 10.2.0-11 [91.6 kB]
Get:221 http://debian.oregonstate.edu/debian unstable/main arm64 libitm1 arm64 10.2.0-11 [23.8 kB]
Get:222 http://debian.oregonstate.edu/debian unstable/main arm64 liblsan0 arm64 10.2.0-11 [126 kB]
Get:223 http://debian.oregonstate.edu/debian unstable/main arm64 libtsan0 arm64 10.2.0-11 [293 kB]
Get:224 http://debian.oregonstate.edu/debian unstable/main arm64 libubsan1 arm64 10.2.0-11 [123 kB]
Get:225 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc-9-dev arm64 9.3.0-18 [884 kB]
Get:226 http://debian.oregonstate.edu/debian unstable/main arm64 libgfortran5 arm64 10.2.0-11 [333 kB]
Get:227 http://debian.oregonstate.edu/debian unstable/main arm64 liblapack3 arm64 3.9.0-3 [1541 kB]
Get:228 http://debian.oregonstate.edu/debian unstable/main arm64 liblapack-dev arm64 3.9.0-3 [2758 kB]
Get:229 http://debian.oregonstate.edu/debian unstable/main arm64 libmmdb2-0 arm64 2.0.5-1 [315 kB]
Get:230 http://debian.oregonstate.edu/debian unstable/main arm64 libopenmm7.5 arm64 7.4.0.491.gac5a8f71+dfsg-1 [594 kB]
Get:231 http://debian.oregonstate.edu/debian unstable/main arm64 libopenmm-dev arm64 7.4.0.491.gac5a8f71+dfsg-1 [148 kB]
Get:232 http://debian.oregonstate.edu/debian unstable/main amd64 libpthread-stubs0-dev amd64 0.4-1 [5344 B]
Get:233 http://debian.oregonstate.edu/debian unstable/main amd64 libseqan2-dev all 2.4.0+dfsg-12 [1220 kB]
Get:234 http://debian.oregonstate.edu/debian unstable/main arm64 libxfixes-dev arm64 1:5.0.3-2 [24.3 kB]
Get:235 http://debian.oregonstate.edu/debian unstable/main amd64 x11proto-input-dev all 2020.1-1 [3412 B]
Get:236 http://debian.oregonstate.edu/debian unstable/main arm64 libxi-dev arm64 2:1.7.10-1 [240 kB]
Get:237 http://debian.oregonstate.edu/debian unstable/main arm64 libxmu6 arm64 2:1.1.2-2+b3 [57.8 kB]
Get:238 http://debian.oregonstate.edu/debian unstable/main amd64 libxau6 amd64 1:1.0.8-1+b2 [19.9 kB]
Get:239 http://debian.oregonstate.edu/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB]
Get:240 http://debian.oregonstate.edu/debian unstable/main amd64 libxcb1 amd64 1.14-2 [139 kB]
Get:241 http://debian.oregonstate.edu/debian unstable/main amd64 libx11-6 amd64 2:1.6.12-1 [770 kB]
Get:242 http://debian.oregonstate.edu/debian unstable/main amd64 libxau-dev amd64 1:1.0.8-1+b2 [23.1 kB]
Get:243 http://debian.oregonstate.edu/debian unstable/main amd64 libxdmcp-dev amd64 1:1.1.2-3 [42.2 kB]
Get:244 http://debian.oregonstate.edu/debian unstable/main amd64 libxcb1-dev amd64 1.14-2 [176 kB]
Get:245 http://debian.oregonstate.edu/debian unstable/main amd64 libx11-dev amd64 2:1.6.12-1 [842 kB]
Get:246 http://debian.oregonstate.edu/debian unstable/main amd64 libxmu-headers all 2:1.1.2-2 [51.9 kB]
Get:247 http://debian.oregonstate.edu/debian unstable/main arm64 libxmu-dev arm64 2:1.1.2-2+b3 [65.5 kB]
Get:248 http://debian.oregonstate.edu/debian unstable/main arm64 libsimbody3.6 arm64 3.6.1+dfsg-7 [2721 kB]
Get:249 http://debian.oregonstate.edu/debian unstable/main arm64 libsimbody-dev arm64 3.6.1+dfsg-7 [2726 kB]
Get:250 http://debian.oregonstate.edu/debian unstable/main arm64 libsimtkmolmodel3.0 arm64 3.0~svn842-2 [455 kB]
Get:251 http://debian.oregonstate.edu/debian unstable/main arm64 libsimtkmolmodel-dev arm64 3.0~svn842-2 [1858 kB]
Get:252 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++-9-dev arm64 9.3.0-18 [1661 kB]
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Setting up libconfig-inifiles-perl (3.000003-1) ...
Setting up libpipeline1:amd64 (1.5.3-1) ...
Setting up libx11-xcb1:arm64 (2:1.6.12-1) ...
Setting up libxau6:amd64 (1:1.0.8-1+b2) ...
Setting up libkeyutils1:amd64 (1.6.1-2) ...
Setting up libpsl5:amd64 (0.21.0-1.1) ...
Setting up perl-modules-5.30 (5.30.3-4) ...
Setting up mime-support (3.64) ...
Setting up bsdextrautils (2.36-3+b1) ...
update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode
Setting up libicu67:amd64 (67.1-4) ...
Setting up libmagic-mgc (1:5.38-5) ...
Setting up libglib2.0-0:amd64 (2.66.0-2) ...
No schema files found: doing nothing.
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Setting up libsqlite3-0:amd64 (3.33.0-1) ...
Setting up x11-common (1:7.7+20) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
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Setting up libnghttp2-14:amd64 (1.41.0-3) ...
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Setting up binutils-aarch64-linux-gnu (2.35.1-1) ...
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Setting up libkrb5support0:amd64 (1.17-10) ...
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Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-2) ...
Setting up asciidoc-common (9.0.0~rc2-1) ...
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Setting up libc6-arm64-cross (2.31-1cross2) ...
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Setting up linux-libc-dev-arm64-cross (5.7.6-1cross2) ...
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Setting up libxdmcp6:amd64 (1:1.1.2-3) ...
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Setting up libtool (2.4.6-14) ...
Setting up libarchive13:amd64 (3.4.3-2) ...
Setting up libasan6-arm64-cross (10.2.0-9cross1) ...
Setting up libreadline8:amd64 (8.0-4) ...
Setting up libtsan0-arm64-cross (10.2.0-9cross1) ...
Setting up libldap-2.4-2:amd64 (2.4.53+dfsg-1) ...
Setting up m4 (1.4.18-4) ...
Setting up libc6-dev-arm64-cross (2.31-1cross2) ...
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Setting up perl (5.30.3-4) ...
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Setting up libgssapi-krb5-2:amd64 (1.17-10) ...
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Setting up ucf (3.0043) ...
Setting up libdpkg-perl (1.20.5) ...
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Setting up g++ (4:10.2.0-1) ...
update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
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Setting up libcurl4:amd64 (7.72.0-1) ...
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Not building database; man-db/auto-update is not 'true'.
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update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...

Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up g++-10-aarch64-linux-gnu (10.2.0-9cross1) ...
Setting up libxml-libxml-perl (2.0134+dfsg-2) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up dh-strip-nondeterminism (1.9.0-1) ...
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Setting up libice-dev:arm64 (2:1.0.10-1) ...
Setting up libmmdb2-0:arm64 (2.0.5-1) ...
Setting up libdrm-radeon1:arm64 (2.4.102-1) ...
Setting up libglvnd0:arm64 (1.3.2-1) ...
Setting up libxcb-glx0:arm64 (1.14-2) ...
Setting up libedit2:arm64 (3.1-20191231-1) ...
Setting up libffi7:arm64 (3.3-4) ...
Setting up libopenmm7.5:arm64 (7.4.0.491.gac5a8f71+dfsg-1) ...
Setting up debhelper (13.2.1) ...
Setting up zlib1g:arm64 (1:1.2.11.dfsg-2) ...
Setting up libgomp1:arm64 (10.2.0-11) ...
Setting up libopenmm-dev:arm64 (7.4.0.491.gac5a8f71+dfsg-1) ...
Setting up libopengl0:arm64 (1.3.2-1) ...
Setting up libxcb-present0:arm64 (1.14-2) ...
Setting up libasan5:arm64 (9.3.0-18) ...
Setting up libxdmcp-dev:arm64 (1:1.1.2-3) ...
Setting up libz3-4:arm64 (4.8.9-1) ...
Setting up libblas3:arm64 (3.9.0-3) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
Setting up libgles2:arm64 (1.3.2-1) ...
Setting up libxcb-sync1:arm64 (1.14-2) ...
Setting up libgles1:arm64 (1.3.2-1) ...
Setting up libatomic1:arm64 (10.2.0-11) ...
Setting up libuuid1:arm64 (2.36-3+b1) ...
Setting up libsensors5:arm64 (1:3.6.0-2) ...
Setting up libglapi-mesa:arm64 (20.1.8-1) ...
Setting up libgfortran5:arm64 (10.2.0-11) ...
Setting up libubsan1:arm64 (10.2.0-11) ...
Setting up libxcb-dri2-0:arm64 (1.14-2) ...
Setting up libx11-6:arm64 (2:1.6.12-1) ...
Setting up libopengl-dev:arm64 (1.3.2-1) ...
Setting up libelf1:arm64 (0.181-1) ...
Setting up libsm6:arm64 (2:1.2.3-1) ...
Setting up libblas-dev:arm64 (3.9.0-3) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode
Setting up libwayland-client0:arm64 (1.18.0-2~exp1.1) ...
Setting up libxcb-dri3-0:arm64 (1.14-2) ...
Setting up libwayland-server0:arm64 (1.18.0-2~exp1.1) ...
Setting up liblapack3:arm64 (3.9.0-3) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
Setting up libxdamage1:arm64 (1:1.1.5-2) ...
Setting up libxcb1-dev:arm64 (1.14-2) ...
Setting up libgbm1:arm64 (20.1.8-1) ...
Setting up libsm-dev:arm64 (2:1.2.3-1) ...
Setting up libx11-dev:arm64 (2:1.6.12-1) ...
Setting up libxext6:arm64 (2:1.3.3-1+b2) ...
Setting up libxxf86vm1:arm64 (1:1.1.4-1+b2) ...
Setting up libllvm10:arm64 (1:10.0.1-6) ...
Setting up libgcc-9-dev:arm64 (9.3.0-18) ...
Setting up libegl-mesa0:arm64 (20.1.8-1) ...
Setting up libxfixes3:arm64 (1:5.0.3-2) ...
Setting up liblapack-dev:arm64 (3.9.0-3) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode
Setting up libxt6:arm64 (1:1.2.0-1) ...
Setting up libxext-dev:arm64 (2:1.3.3-1+b2) ...
Setting up libegl1:arm64 (1.3.2-1) ...
Setting up libxmu6:arm64 (2:1.1.2-2+b3) ...
Setting up libstdc++-9-dev:arm64 (9.3.0-18) ...
Setting up libxi6:arm64 (2:1.7.10-1) ...
Setting up libgl1-mesa-dri:arm64 (20.1.8-1) ...
Setting up libxfixes-dev:arm64 (1:5.0.3-2) ...
Setting up libxt-dev:arm64 (1:1.2.0-1) ...
Setting up libxi-dev:arm64 (2:1.7.10-1) ...
Setting up libglx-mesa0:arm64 (20.1.8-1) ...
Setting up libglx0:arm64 (1.3.2-1) ...
Setting up libxmu-dev:arm64 (2:1.1.2-2+b3) ...
Setting up libgl1:arm64 (1.3.2-1) ...
Setting up libglx-dev:arm64 (1.3.2-1) ...
Setting up libglu1-mesa:arm64 (9.0.1-1) ...
Setting up libgl-dev:arm64 (1.3.2-1) ...
Setting up freeglut3:arm64 (2.8.1-6) ...
Setting up libegl-dev:arm64 (1.3.2-1) ...
Setting up libglu1-mesa-dev:arm64 (9.0.1-1) ...
Setting up libsimbody3.6:arm64 (3.6.1+dfsg-7) ...
Setting up libgles-dev:arm64 (1.3.2-1) ...
Setting up libsimtkmolmodel3.0:arm64 (3.0~svn842-2) ...
Setting up libsimtkmolmodel-dev:arm64 (3.0~svn842-2) ...
Setting up libglvnd-dev:arm64 (1.3.2-1) ...
Setting up libgl1-mesa-dev:arm64 (20.1.8-1) ...
Setting up freeglut3-dev:arm64 (2.8.1-6) ...
Setting up libsimbody-dev:arm64 (3.6.1+dfsg-7) ...
Setting up sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ...
Processing triggers for libc-bin (2.31-3) ...

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (arm64 included in any all)

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.19.0-10-amd64 #1 SMP Debian 4.19.132-1 (2020-07-24) amd64 (x86_64)
Toolchain package versions: binutils_2.35.1-1 dpkg-dev_1.20.5 g++-10_10.2.0-11 gcc-10_10.2.0-11 libc6-dev_2.31-3 libstdc++-10-dev_10.2.0-11 libstdc++-10-dev-arm64-cross_10.2.0-9cross1 libstdc++-9-dev_9.3.0-18 libstdc++6_10.2.0-11 libstdc++6-arm64-cross_10.2.0-9cross1 linux-libc-dev_5.8.10-1
Package versions: adduser_3.118 apt_2.1.10 asciidoc-base_9.0.0~rc2-1 asciidoc-common_9.0.0~rc2-1 autoconf_2.69-11.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-7 binutils_2.35.1-1 binutils-aarch64-linux-gnu_2.35.1-1 binutils-common_2.35.1-1 binutils-x86-64-linux-gnu_2.35.1-1 bsdextrautils_2.36-3+b1 bsdutils_1:2.36-3+b1 build-essential_12.8 bzip2_1.0.8-4 cmake_3.18.2-1 cmake-data_3.18.2-1 coreutils_8.32-4+b1 cpp_4:10.2.0-1 cpp-10_10.2.0-11 cpp-10-aarch64-linux-gnu_10.2.0-9cross1 cpp-8_8.4.0-4 cpp-aarch64-linux-gnu_4:10.2.0-1 cross-config_2.6.15-3.1 crossbuild-essential-arm64_12.8 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2.1 debian-archive-keyring_2019.1 debianutils_4.11.2 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dpkg_1.20.5 dpkg-cross_2.6.15-3.1 dpkg-dev_1.20.5 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.25.1-1 fdisk_2.36-3+b1 file_1:5.38-5 findutils_4.7.0-1 freeglut3_2.8.1-6 freeglut3-dev_2.8.1-6 g++_4:10.2.0-1 g++-10_10.2.0-11 g++-10-aarch64-linux-gnu_10.2.0-9cross1 g++-aarch64-linux-gnu_4:10.2.0-1 gcc_4:10.2.0-1 gcc-10_10.2.0-11 gcc-10-aarch64-linux-gnu_10.2.0-9cross1 gcc-10-aarch64-linux-gnu-base_10.2.0-9cross1 gcc-10-base_10.2.0-11 gcc-10-cross-base_10.2.0-9cross1 gcc-8-base_8.4.0-4 gcc-9-base_9.3.0-18 gcc-aarch64-linux-gnu_4:10.2.0-1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.1.10 libarchive-zip-perl_1.68-1 libarchive13_3.4.3-2 libasan5_9.3.0-18 libasan6_10.2.0-11 libasan6-arm64-cross_10.2.0-9cross1 libatomic1_10.2.0-11 libatomic1-arm64-cross_10.2.0-9cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3+b1 libbinutils_2.35.1-1 libblas-dev_3.9.0-3 libblas3_3.9.0-3 libblkid1_2.36-3+b1 libbrotli1_1.0.9-2 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-4 libc-bin_2.31-3 libc-dev-bin_2.31-3 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libldap-2.4-2_2.4.53+dfsg-1 libllvm10_1:10.0.1-6 liblocale-gettext-perl_1.07-4 liblsan0_10.2.0-11 liblsan0-arm64-cross_10.2.0-9cross1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmmdb2-0_2.0.5-1 libmount1_2.36-3+b1 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libmpx2_8.4.0-4 libncurses6_6.2+20200918-1 libncursesw6_6.2+20200918-1 libnettle6_3.5.1+really3.4.1-1 libnettle8_3.6-2 libnghttp2-14_1.41.0-3 libopengl-dev_1.3.2-1 libopengl0_1.3.2-1 libopenmm-dev_7.4.0.491.gac5a8f71+dfsg-1 libopenmm7.5_7.4.0.491.gac5a8f71+dfsg-1 libp11-kit0_0.23.21-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.28_5.28.1-6 libperl5.30_5.30.3-4 libpipeline1_1.5.3-1 libprocps8_2:3.3.16-5 libpsl5_0.21.0-1.1 libpthread-stubs0-dev_0.4-1 libpython3-stdlib_3.8.2-3 libpython3.8-minimal_3.8.6-1 libpython3.8-stdlib_3.8.6-1 libquadmath0_10.2.0-11 libreadline8_8.0-4 librhash0_1.4.0-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.4-1 libselinux1_3.1-2 libsemanage-common_3.1-1 libsemanage1_3.1-1 libsensors-config_1:3.6.0-2 libsensors5_1:3.6.0-2 libsepol1_3.1-1 libseqan2-dev_2.4.0+dfsg-12 libsigsegv2_2.12-2 libsimbody-dev_3.6.1+dfsg-7 libsimbody3.6_3.6.1+dfsg-7 libsimtkmolmodel-dev_3.0~svn842-2 libsimtkmolmodel3.0_3.0~svn842-2 libsm-dev_2:1.2.3-1 libsm6_2:1.2.3-1 libsmartcols1_2.36-3+b1 libsqlite3-0_3.33.0-1 libss2_1.45.6-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1g-1 libstdc++-10-dev_10.2.0-11 libstdc++-10-dev-arm64-cross_10.2.0-9cross1 libstdc++-9-dev_9.3.0-18 libstdc++6_10.2.0-11 libstdc++6-arm64-cross_10.2.0-9cross1 libsub-override-perl_0.09-2 libsystemd0_246.6-1 libtasn1-6_4.16.0-2 libtinfo6_6.2+20200918-1 libtool_2.4.6-14 libtsan0_10.2.0-11 libtsan0-arm64-cross_10.2.0-9cross1 libubsan1_10.2.0-11 libubsan1-arm64-cross_10.2.0-9cross1 libuchardet0_0.0.7-1 libudev1_246.6-1 libunistring2_0.9.10-4 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+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 3.0 (quilt)
Source: macromoleculebuilder
Binary: libmmblib-dev, libmmblib3.2, mmb, mmb-common
Architecture: any all
Version: 3.2+dfsg-1
Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
Uploaders:  Andrius Merkys <merkys@debian.org>,
Homepage: https://simtk.org/projects/rnatoolbox
Standards-Version: 4.5.0
Vcs-Browser: https://salsa.debian.org/debichem-team/macromoleculebuilder
Vcs-Git: https://salsa.debian.org/debichem-team/macromoleculebuilder.git
Build-Depends: asciidoc-base, cmake, debhelper-compat (= 12), libopenmm-dev, libseqan2-dev, libsimbody-dev, libsimtkmolmodel-dev
Package-List:
 libmmblib-dev deb libdevel optional arch=any
 libmmblib3.2 deb libs optional arch=any
 mmb deb science optional arch=any
 mmb-common deb science optional arch=all
Checksums-Sha1:
 88b9198cf490b04d9a779feaa40b2234f350fee7 2473540 macromoleculebuilder_3.2+dfsg.orig.tar.xz
 24b7e8d3a205af0b0688a39255d618cca9f05bc2 2844 macromoleculebuilder_3.2+dfsg-1.debian.tar.xz
Checksums-Sha256:
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 0e80deeb02805ea4336b391d90b13449ed9d0221614dd30764670752904f400a 2844 macromoleculebuilder_3.2+dfsg-1.debian.tar.xz
Files:
 3513a98bf6abc5507654af253a412a7c 2473540 macromoleculebuilder_3.2+dfsg.orig.tar.xz
 08edaa405f94a40aa0ad4dc104fbaa31 2844 macromoleculebuilder_3.2+dfsg-1.debian.tar.xz

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gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.iFTXgsRx/trustedkeys.kbx': General error
gpgv: Signature made Thu Jul 23 13:05:11 2020 UTC
gpgv:                using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287
gpgv:                issuer "merkys@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./macromoleculebuilder_3.2+dfsg-1.dsc
dpkg-source: info: extracting macromoleculebuilder in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking macromoleculebuilder_3.2+dfsg.orig.tar.xz
dpkg-source: info: unpacking macromoleculebuilder_3.2+dfsg-1.debian.tar.xz

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
CONFIG_SITE=/etc/dpkg-cross/cross-config.arm64
DEB_BUILD_OPTIONS=nocheck
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=C.UTF-8
LOGNAME=helmut
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=unstable-amd64-sbuild
SCHROOT_CHROOT_NAME=unstable-amd64-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=1003
SCHROOT_GROUP=helmut
SCHROOT_SESSION_ID=unstable-amd64-sbuild-cfa099b1-6c28-409c-ae24-27f69cb33a07
SCHROOT_UID=1003
SCHROOT_USER=helmut
SHELL=/bin/sh
USER=helmut

dpkg-buildpackage
-----------------

Command: dpkg-buildpackage -aarm64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1
dpkg-buildpackage: info: source package macromoleculebuilder
dpkg-buildpackage: info: source version 3.2+dfsg-1
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Andrius Merkys <merkys@debian.org>
dpkg-architecture: warning: specified GNU system type aarch64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
 debian/rules clean
dh clean
   dh_clean
 debian/rules binary-arch
dh binary-arch
   dh_update_autotools_config -a
   dh_autoreconf -a
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure -- \
	-DOpenMM_INCLUDE_DIR=/usr/include \
	-DCMAKE_CXX_FLAGS="-D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0"
	cd obj-aarch64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=aarch64 -DCMAKE_C_COMPILER=aarch64-linux-gnu-gcc -DCMAKE_CXX_COMPILER=aarch64-linux-gnu-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/aarch64-linux-gnu-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/aarch64-linux-gnu-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/aarch64-linux-gnu-qmake -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DOpenMM_INCLUDE_DIR=/usr/include "-DCMAKE_CXX_FLAGS=-D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0" ..
-- The C compiler identification is GNU 10.2.0
-- The CXX compiler identification is GNU 10.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/aarch64-linux-gnu-gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/aarch64-linux-gnu-g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_INSTALL_LIBDIR
    CMAKE_INSTALL_LOCALSTATEDIR
    CMAKE_INSTALL_RUNSTATEDIR
    CMAKE_INSTALL_SYSCONFDIR
    PKGCONFIG_EXECUTABLE
    PKG_CONFIG_EXECUTABLE
    QMAKE_EXECUTABLE


-- Build files have been written to: /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_auto_build -a
	cd obj-aarch64-linux-gnu && make -j1 "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu/CMakeFiles /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu//CMakeFiles/progress.marks
make  -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
make  -f CMakeFiles/MMBlib.dir/build.make CMakeFiles/MMBlib.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
cd /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu/CMakeFiles/MMBlib.dir/DependInfo.cmake --color=
Scanning dependencies of target MMBlib
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
make  -f CMakeFiles/MMBlib.dir/build.make CMakeFiles/MMBlib.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
[  3%] Building CXX object CMakeFiles/MMBlib.dir/src/Utils.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/Utils.cpp.o -c /<<PKGBUILDDIR>>/src/Utils.cpp
In file included from /<<PKGBUILDDIR>>/src/Utils.cpp:11:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
/<<PKGBUILDDIR>>/src/Utils.cpp: In function ‘int ValidateNonNegativeInt(int)’:
/<<PKGBUILDDIR>>/src/Utils.cpp:526:1: warning: control reaches end of non-void function [-Wreturn-type]
  526 | }
      | ^
[  6%] Building CXX object CMakeFiles/MMBlib.dir/src/BiopolymerClass.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/BiopolymerClass.cpp.o -c /<<PKGBUILDDIR>>/src/BiopolymerClass.cpp
In file included from /<<PKGBUILDDIR>>/include/Mutation.h:4,
                 from /<<PKGBUILDDIR>>/include/BiopolymerClass.h:18,
                 from /<<PKGBUILDDIR>>/src/BiopolymerClass.cpp:13:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp: In member function ‘bool BiopolymerClass::setRenumberPdbResidues(bool)’:
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp:1067:5: warning: no return statement in function returning non-void [-Wreturn-type]
 1067 |     }
      |     ^
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp: In member function ‘bool BiopolymerClassContainer::setRenumberPdbResidues(bool)’:
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp:4725:1: warning: no return statement in function returning non-void [-Wreturn-type]
 4725 | }
      | ^
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp: In member function ‘int BiopolymerClass::validateBiopolymerType() const’:
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp:356:1: warning: control reaches end of non-void function [-Wreturn-type]
  356 | }
      | ^
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp: In member function ‘SimTK::String BiopolymerClass::getBiopolymerTypeAsString()’:
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp:1062:1: warning: control reaches end of non-void function [-Wreturn-type]
 1062 | }
      | ^
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp: In member function ‘int BiopolymerClass::validateAtomPathName(SimTK::Compound::AtomPathName)’:
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp:1133:1: warning: control reaches end of non-void function [-Wreturn-type]
 1133 | }
      | ^
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp: In member function ‘const SimTK::ResidueInfo::Index BiopolymerClass::getResidueIndex(ResidueID)’:
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp:1529:1: warning: control reaches end of non-void function [-Wreturn-type]
 1529 | }
      | ^
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp: In member function ‘SimTK::String BiopolymerClass::getRepresentativeAtomName()’:
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp:1552:1: warning: control reaches end of non-void function [-Wreturn-type]
 1552 | }
      | ^
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp: In member function ‘double BiopolymerClass::getRepresentativeAtomMassThreshold()’:
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp:1569:1: warning: control reaches end of non-void function [-Wreturn-type]
 1569 | }
      | ^
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp: In member function ‘int BiopolymerClassContainer::initializeBiopolymer(SimTK::String, SimTK::CompoundSystem&, bool, bool, bool, bool, bool, bool, bool, double, std::vector<Displacement>, double, double, std::vector<SecondaryStructureStretch>)’:
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp:2749:1: warning: control reaches end of non-void function [-Wreturn-type]
 2749 | }
      | ^
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp: In member function ‘int BiopolymerClassContainer::getBiopolymerClassIndex(SimTK::String)’:
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp:2850:1: warning: control reaches end of non-void function [-Wreturn-type]
 2850 | }
      | ^
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp: In member function ‘BiopolymerClass& BiopolymerClassContainer::updBiopolymerClass(int)’:
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp:2867:1: warning: control reaches end of non-void function [-Wreturn-type]
 2867 | }
      | ^
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp: In member function ‘int BiopolymerClassContainer::validateChainID(SimTK::String)’:
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp:3038:1: warning: control reaches end of non-void function [-Wreturn-type]
 3038 | }
      | ^
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp: In member function ‘ResidueID BiopolymerClassContainer::residueID(std::map<const SimTK::String, double>, const char*, SimTK::String)’:
/<<PKGBUILDDIR>>/src/BiopolymerClass.cpp:4174:1: warning: control reaches end of non-void function [-Wreturn-type]
 4174 | }
      | ^
[ 10%] Building CXX object CMakeFiles/MMBlib.dir/src/UnitCellParameters.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/UnitCellParameters.cpp.o -c /<<PKGBUILDDIR>>/src/UnitCellParameters.cpp
/<<PKGBUILDDIR>>/src/UnitCellParameters.cpp: In member function ‘const double UnitCellParameters::angleInRange(double)’:
/<<PKGBUILDDIR>>/src/UnitCellParameters.cpp:165:2: warning: control reaches end of non-void function [-Wreturn-type]
  165 |  }
      |  ^
/<<PKGBUILDDIR>>/src/UnitCellParameters.cpp: In member function ‘const bool UnitCellParameters::exitIfNotValid() const’:
/<<PKGBUILDDIR>>/src/UnitCellParameters.cpp:270:1: warning: control reaches end of non-void function [-Wreturn-type]
  270 | }
      | ^
[ 13%] Building CXX object CMakeFiles/MMBlib.dir/src/AtomSpringContainer.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/AtomSpringContainer.cpp.o -c /<<PKGBUILDDIR>>/src/AtomSpringContainer.cpp
In file included from /<<PKGBUILDDIR>>/include/AtomSpringContainer.h:14,
                 from /<<PKGBUILDDIR>>/src/AtomSpringContainer.cpp:12:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
[ 17%] Building CXX object CMakeFiles/MMBlib.dir/src/DisplacementContainer.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/DisplacementContainer.cpp.o -c /<<PKGBUILDDIR>>/src/DisplacementContainer.cpp
In file included from /<<PKGBUILDDIR>>/include/Mutation.h:4,
                 from /<<PKGBUILDDIR>>/include/BiopolymerClass.h:18,
                 from /<<PKGBUILDDIR>>/include/DisplacementContainer.h:14,
                 from /<<PKGBUILDDIR>>/src/DisplacementContainer.cpp:12:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
/<<PKGBUILDDIR>>/src/DisplacementContainer.cpp: In member function ‘Displacement& DisplacementContainer::updDisplacement(SimTK::String)’:
/<<PKGBUILDDIR>>/src/DisplacementContainer.cpp:41:1: warning: control reaches end of non-void function [-Wreturn-type]
   41 | };
      | ^
[ 20%] Building CXX object CMakeFiles/MMBlib.dir/src/MobilizerContainer.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/MobilizerContainer.cpp.o -c /<<PKGBUILDDIR>>/src/MobilizerContainer.cpp
In file included from /<<PKGBUILDDIR>>/src/MobilizerContainer.cpp:11:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
[ 24%] Building CXX object CMakeFiles/MMBlib.dir/src/MoleculeContainer.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/MoleculeContainer.cpp.o -c /<<PKGBUILDDIR>>/src/MoleculeContainer.cpp
In file included from /<<PKGBUILDDIR>>/include/ConstraintContainer.h:14,
                 from /<<PKGBUILDDIR>>/include/MoleculeContainer.h:9,
                 from /<<PKGBUILDDIR>>/src/MoleculeContainer.cpp:3:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
/<<PKGBUILDDIR>>/src/MoleculeContainer.cpp: In member function ‘SimTK::Compound CompoundObjectMapContainer::fetchCompound(SimTK::String)’:
/<<PKGBUILDDIR>>/src/MoleculeContainer.cpp:73:1: warning: control reaches end of non-void function [-Wreturn-type]
   73 | }
      | ^
/<<PKGBUILDDIR>>/src/MoleculeContainer.cpp: In member function ‘SimTK::Biotype CompoundObjectMapContainer::fetchBiotype(SimTK::String)’:
/<<PKGBUILDDIR>>/src/MoleculeContainer.cpp:92:1: warning: control reaches end of non-void function [-Wreturn-type]
   92 | }
      | ^
/<<PKGBUILDDIR>>/src/MoleculeContainer.cpp: In member function ‘const SimTK::Element CompoundObjectMapContainer::fetchElement(SimTK::String)’:
/<<PKGBUILDDIR>>/src/MoleculeContainer.cpp:220:1: warning: control reaches end of non-void function [-Wreturn-type]
  220 | }
      | ^
/<<PKGBUILDDIR>>/src/MoleculeContainer.cpp: In member function ‘SimTK::Compound::SingleAtom CompoundObjectMapContainer::fetchSingleAtom(SimTK::String, SimTK::Compound::AtomName&, SimTK::String, SimTK::Angle)’:
/<<PKGBUILDDIR>>/src/MoleculeContainer.cpp:244:1: warning: control reaches end of non-void function [-Wreturn-type]
  244 | }
      | ^
/<<PKGBUILDDIR>>/src/MoleculeContainer.cpp: In member function ‘bool MoleculeClassContainer::hasChainID(SimTK::String)’:
/<<PKGBUILDDIR>>/src/MoleculeContainer.cpp:722:1: warning: control reaches end of non-void function [-Wreturn-type]
  722 | }
      | ^
[ 27%] Building CXX object CMakeFiles/MMBlib.dir/src/DensityContainer.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/DensityContainer.cpp.o -c /<<PKGBUILDDIR>>/src/DensityContainer.cpp
In file included from /<<PKGBUILDDIR>>/include/Mutation.h:4,
                 from /<<PKGBUILDDIR>>/include/BiopolymerClass.h:18,
                 from /<<PKGBUILDDIR>>/include/DensityContainer.h:14,
                 from /<<PKGBUILDDIR>>/src/DensityContainer.cpp:11:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
[ 31%] Building CXX object CMakeFiles/MMBlib.dir/src/BasePairContainer.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/BasePairContainer.cpp.o -c /<<PKGBUILDDIR>>/src/BasePairContainer.cpp
In file included from /<<PKGBUILDDIR>>/include/Mutation.h:4,
                 from /<<PKGBUILDDIR>>/include/BiopolymerClass.h:18,
                 from /<<PKGBUILDDIR>>/include/BasePairContainer.h:14,
                 from /<<PKGBUILDDIR>>/src/BasePairContainer.cpp:11:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
/<<PKGBUILDDIR>>/src/BasePairContainer.cpp: In member function ‘bool BasePairContainer::hasWatsonCrickCisPair(SimTK::String, ResidueID)’:
/<<PKGBUILDDIR>>/src/BasePairContainer.cpp:184:1: warning: control reaches end of non-void function [-Wreturn-type]
  184 | }
      | ^
/<<PKGBUILDDIR>>/src/BasePairContainer.cpp: In member function ‘const BaseInteraction BasePairContainer::getWatsonCrickCisPair(SimTK::String, ResidueID)’:
/<<PKGBUILDDIR>>/src/BasePairContainer.cpp:206:1: warning: control reaches end of non-void function [-Wreturn-type]
  206 | } // of method
      | ^
/<<PKGBUILDDIR>>/src/BasePairContainer.cpp: In member function ‘const ResidueID BasePairContainer::getWatsonCrickCisPairingResidue(SimTK::String, ResidueID)’:
/<<PKGBUILDDIR>>/src/BasePairContainer.cpp:223:1: warning: control reaches end of non-void function [-Wreturn-type]
  223 | }
      | ^
/<<PKGBUILDDIR>>/src/BasePairContainer.cpp: In member function ‘const SimTK::String BasePairContainer::getWatsonCrickCisPairingChain(SimTK::String, ResidueID)’:
/<<PKGBUILDDIR>>/src/BasePairContainer.cpp:237:1: warning: control reaches end of non-void function [-Wreturn-type]
  237 | }
      | ^
/<<PKGBUILDDIR>>/src/BasePairContainer.cpp: In member function ‘const ResidueID BasePairContainer::getLastWatsonCrickCisPairingResidueOfRun(SimTK::String, ResidueID, BiopolymerClassContainer&)’:
/<<PKGBUILDDIR>>/src/BasePairContainer.cpp:289:1: warning: control reaches end of non-void function [-Wreturn-type]
  289 | } // of getLastWatsonCrickCisPairingResidueOfRun
      | ^
[ 34%] Building CXX object CMakeFiles/MMBlib.dir/src/ContactContainer.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/ContactContainer.cpp.o -c /<<PKGBUILDDIR>>/src/ContactContainer.cpp
In file included from /<<PKGBUILDDIR>>/src/ContactContainer.cpp:11:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
[ 37%] Building CXX object CMakeFiles/MMBlib.dir/src/ConstraintContainer.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/ConstraintContainer.cpp.o -c /<<PKGBUILDDIR>>/src/ConstraintContainer.cpp
In file included from /<<PKGBUILDDIR>>/include/ConstraintContainer.h:14,
                 from /<<PKGBUILDDIR>>/src/ConstraintContainer.cpp:10:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
[ 41%] Building CXX object CMakeFiles/MMBlib.dir/src/Repel.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/Repel.cpp.o -c /<<PKGBUILDDIR>>/src/Repel.cpp
In file included from /<<PKGBUILDDIR>>/include/AtomSpringContainer.h:14,
                 from /<<PKGBUILDDIR>>/include/ParameterReader.h:20,
                 from /<<PKGBUILDDIR>>/include/PeriodicScrubber.h:16,
                 from /<<PKGBUILDDIR>>/include/Repel.h:21,
                 from /<<PKGBUILDDIR>>/src/Repel.cpp:12:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
/<<PKGBUILDDIR>>/src/Repel.cpp: In member function ‘void ConstrainedDynamics::constraintsAndRestraints(ParameterReader&, BiopolymerClassContainer&, SimTK::GeneralForceSubsystem&, SimTK::SimbodyMatterSubsystem&, SimTK::State&, SimTK::CompoundSystem&)’:
/<<PKGBUILDDIR>>/src/Repel.cpp:127:49: note: ‘#pragma message: USE_OPENMM is defined’
  127 |         #pragma message ("USE_OPENMM is defined")
      |                                                 ^
[ 44%] Building CXX object CMakeFiles/MMBlib.dir/src/MonoAtoms.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/MonoAtoms.cpp.o -c /<<PKGBUILDDIR>>/src/MonoAtoms.cpp
In file included from /<<PKGBUILDDIR>>/src/MonoAtoms.cpp:11:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
/<<PKGBUILDDIR>>/src/MonoAtoms.cpp: In member function ‘const int MonoAtoms::getResidueIndex(ResidueID)’:
/<<PKGBUILDDIR>>/src/MonoAtoms.cpp:153:1: warning: control reaches end of non-void function [-Wreturn-type]
  153 | }
      | ^
/<<PKGBUILDDIR>>/src/MonoAtoms.cpp: In member function ‘MonoAtoms MonoAtomsContainer::getMonoAtoms(SimTK::String)’:
/<<PKGBUILDDIR>>/src/MonoAtoms.cpp:277:1: warning: control reaches end of non-void function [-Wreturn-type]
  277 | }
      | ^
[ 48%] Building CXX object CMakeFiles/MMBlib.dir/src/ParameterReader.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/ParameterReader.cpp.o -c /<<PKGBUILDDIR>>/src/ParameterReader.cpp
In file included from /<<PKGBUILDDIR>>/include/AtomSpringContainer.h:14,
                 from /<<PKGBUILDDIR>>/include/ParameterReader.h:20,
                 from /<<PKGBUILDDIR>>/src/ParameterReader.cpp:17:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
[ 51%] Building CXX object CMakeFiles/MMBlib.dir/src/BaseInteractionParameterReader.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/BaseInteractionParameterReader.cpp.o -c /<<PKGBUILDDIR>>/src/BaseInteractionParameterReader.cpp
In file included from /<<PKGBUILDDIR>>/include/BaseInteractionParameterReader.h:22,
                 from /<<PKGBUILDDIR>>/src/BaseInteractionParameterReader.cpp:16:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
[ 55%] Building CXX object CMakeFiles/MMBlib.dir/src/TetherForce.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/TetherForce.cpp.o -c /<<PKGBUILDDIR>>/src/TetherForce.cpp
In file included from /<<PKGBUILDDIR>>/include/AtomSpringContainer.h:14,
                 from /<<PKGBUILDDIR>>/include/ParameterReader.h:20,
                 from /<<PKGBUILDDIR>>/include/TetherForce.h:20,
                 from /<<PKGBUILDDIR>>/src/TetherForce.cpp:11:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
[ 58%] Building CXX object CMakeFiles/MMBlib.dir/src/BiopolymerClassTwoTransformForces.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/BiopolymerClassTwoTransformForces.cpp.o -c /<<PKGBUILDDIR>>/src/BiopolymerClassTwoTransformForces.cpp
In file included from /<<PKGBUILDDIR>>/include/AtomSpringContainer.h:14,
                 from /<<PKGBUILDDIR>>/include/ParameterReader.h:20,
                 from /<<PKGBUILDDIR>>/include/BiopolymerClassTwoTransformForces.h:18,
                 from /<<PKGBUILDDIR>>/src/BiopolymerClassTwoTransformForces.cpp:10:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
[ 62%] Building CXX object CMakeFiles/MMBlib.dir/src/WaterDroplet.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/WaterDroplet.cpp.o -c /<<PKGBUILDDIR>>/src/WaterDroplet.cpp
In file included from /<<PKGBUILDDIR>>/include/WaterDroplet.h:16,
                 from /<<PKGBUILDDIR>>/src/WaterDroplet.cpp:11:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
/<<PKGBUILDDIR>>/src/WaterDroplet.cpp: In member function ‘WaterDroplet WaterDropletContainer::getWaterDroplet(std::string)’:
/<<PKGBUILDDIR>>/src/WaterDroplet.cpp:108:1: warning: control reaches end of non-void function [-Wreturn-type]
  108 | }
      | ^
/<<PKGBUILDDIR>>/src/WaterDroplet.cpp: In member function ‘WaterDroplet& WaterDropletContainer::updWaterDroplet(std::string)’:
/<<PKGBUILDDIR>>/src/WaterDroplet.cpp:120:1: warning: control reaches end of non-void function [-Wreturn-type]
  120 | }
      | ^
[ 65%] Building CXX object CMakeFiles/MMBlib.dir/src/DensityMap.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/DensityMap.cpp.o -c /<<PKGBUILDDIR>>/src/DensityMap.cpp
In file included from /<<PKGBUILDDIR>>/src/DensityMap.cpp:11:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
/<<PKGBUILDDIR>>/src/DensityMap.cpp: In member function ‘GridPoint& DensityMap::updGridPoint(GridIndices)’:
/<<PKGBUILDDIR>>/src/DensityMap.cpp:127:5: warning: control reaches end of non-void function [-Wreturn-type]
  127 |     }
      |     ^
/<<PKGBUILDDIR>>/src/DensityMap.cpp: In member function ‘SimTK::Vec3 DensityMap::calcInterpolatedFirstQuadrantGradient(GridPoint&, SimTK::Vec3) const’:
/<<PKGBUILDDIR>>/src/DensityMap.cpp:1448:1: warning: control reaches end of non-void function [-Wreturn-type]
 1448 | }
      | ^
[ 68%] Building CXX object CMakeFiles/MMBlib.dir/src/DensityForce.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/DensityForce.cpp.o -c /<<PKGBUILDDIR>>/src/DensityForce.cpp
In file included from /<<PKGBUILDDIR>>/include/AtomSpringContainer.h:14,
                 from /<<PKGBUILDDIR>>/include/ParameterReader.h:20,
                 from /<<PKGBUILDDIR>>/include/DensityForce.h:20,
                 from /<<PKGBUILDDIR>>/src/DensityForce.cpp:11:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
[ 72%] Building CXX object CMakeFiles/MMBlib.dir/src/ElectrostaticPotentialGridForce.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/ElectrostaticPotentialGridForce.cpp.o -c /<<PKGBUILDDIR>>/src/ElectrostaticPotentialGridForce.cpp
In file included from /<<PKGBUILDDIR>>/include/AtomSpringContainer.h:14,
                 from /<<PKGBUILDDIR>>/include/ParameterReader.h:20,
                 from /<<PKGBUILDDIR>>/include/ElectrostaticPotentialGridForce.h:20,
                 from /<<PKGBUILDDIR>>/src/ElectrostaticPotentialGridForce.cpp:11:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
[ 75%] Building CXX object CMakeFiles/MMBlib.dir/src/ErrorManager.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/ErrorManager.cpp.o -c /<<PKGBUILDDIR>>/src/ErrorManager.cpp
/<<PKGBUILDDIR>>/src/ErrorManager.cpp: In member function ‘ErrorManager& ErrorManager::operator=(const ErrorManager&)’:
/<<PKGBUILDDIR>>/src/ErrorManager.cpp:25:1: warning: no return statement in function returning non-void [-Wreturn-type]
   24 |     _buffer << em._buffer.rdbuf();
  +++ |+    return *this;
   25 | }
      | ^
[ 79%] Building CXX object CMakeFiles/MMBlib.dir/src/PeriodicPdbAndEnergyWriter.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/PeriodicPdbAndEnergyWriter.cpp.o -c /<<PKGBUILDDIR>>/src/PeriodicPdbAndEnergyWriter.cpp
In file included from /<<PKGBUILDDIR>>/include/AtomSpringContainer.h:14,
                 from /<<PKGBUILDDIR>>/include/ParameterReader.h:20,
                 from /<<PKGBUILDDIR>>/include/PeriodicPdbAndEnergyWriter.h:13,
                 from /<<PKGBUILDDIR>>/src/PeriodicPdbAndEnergyWriter.cpp:15:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
[ 82%] Building CXX object CMakeFiles/MMBlib.dir/src/NTC_PARAMETER_READER.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/NTC_PARAMETER_READER.cpp.o -c /<<PKGBUILDDIR>>/src/NTC_PARAMETER_READER.cpp
In file included from /<<PKGBUILDDIR>>/include/Mutation.h:4,
                 from /<<PKGBUILDDIR>>/include/BiopolymerClass.h:18,
                 from /<<PKGBUILDDIR>>/include/NtC_Class_Container.h:14,
                 from /<<PKGBUILDDIR>>/src/NTC_PARAMETER_READER.cpp:16:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
[ 86%] Building CXX object CMakeFiles/MMBlib.dir/src/NtCClassContainer.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/NtCClassContainer.cpp.o -c /<<PKGBUILDDIR>>/src/NtCClassContainer.cpp
In file included from /<<PKGBUILDDIR>>/include/Mutation.h:4,
                 from /<<PKGBUILDDIR>>/include/BiopolymerClass.h:18,
                 from /<<PKGBUILDDIR>>/src/NtCClassContainer.cpp:12:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
[ 89%] Building CXX object CMakeFiles/MMBlib.dir/src/NtCForces.cpp.o
/usr/bin/aarch64-linux-gnu-g++ -DMMBlib_EXPORTS -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -fPIC -DMMB_BUILDING_SHARED_LIBRARY -o CMakeFiles/MMBlib.dir/src/NtCForces.cpp.o -c /<<PKGBUILDDIR>>/src/NtCForces.cpp
In file included from /<<PKGBUILDDIR>>/include/AtomSpringContainer.h:14,
                 from /<<PKGBUILDDIR>>/include/ParameterReader.h:20,
                 from /<<PKGBUILDDIR>>/include/NtCForces.h:19,
                 from /<<PKGBUILDDIR>>/src/NtCForces.cpp:10:
/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
[ 93%] Linking CXX shared library libMMBlib.so
/usr/bin/cmake -E cmake_link_script CMakeFiles/MMBlib.dir/link.txt --verbose=1
/usr/bin/aarch64-linux-gnu-g++ -fPIC -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -Wl,-z,relro -shared -Wl,-soname,libMMBlib.so.3.2 -o libMMBlib.so.3.2 CMakeFiles/MMBlib.dir/src/Utils.cpp.o CMakeFiles/MMBlib.dir/src/BiopolymerClass.cpp.o CMakeFiles/MMBlib.dir/src/UnitCellParameters.cpp.o CMakeFiles/MMBlib.dir/src/AtomSpringContainer.cpp.o CMakeFiles/MMBlib.dir/src/DisplacementContainer.cpp.o CMakeFiles/MMBlib.dir/src/MobilizerContainer.cpp.o CMakeFiles/MMBlib.dir/src/MoleculeContainer.cpp.o CMakeFiles/MMBlib.dir/src/DensityContainer.cpp.o CMakeFiles/MMBlib.dir/src/BasePairContainer.cpp.o CMakeFiles/MMBlib.dir/src/ContactContainer.cpp.o CMakeFiles/MMBlib.dir/src/ConstraintContainer.cpp.o CMakeFiles/MMBlib.dir/src/Repel.cpp.o CMakeFiles/MMBlib.dir/src/MonoAtoms.cpp.o CMakeFiles/MMBlib.dir/src/ParameterReader.cpp.o CMakeFiles/MMBlib.dir/src/BaseInteractionParameterReader.cpp.o CMakeFiles/MMBlib.dir/src/TetherForce.cpp.o CMakeFiles/MMBlib.dir/src/BiopolymerClassTwoTransformForces.cpp.o CMakeFiles/MMBlib.dir/src/WaterDroplet.cpp.o CMakeFiles/MMBlib.dir/src/DensityMap.cpp.o CMakeFiles/MMBlib.dir/src/DensityForce.cpp.o CMakeFiles/MMBlib.dir/src/ElectrostaticPotentialGridForce.cpp.o CMakeFiles/MMBlib.dir/src/ErrorManager.cpp.o CMakeFiles/MMBlib.dir/src/PeriodicPdbAndEnergyWriter.cpp.o CMakeFiles/MMBlib.dir/src/NTC_PARAMETER_READER.cpp.o CMakeFiles/MMBlib.dir/src/NtCClassContainer.cpp.o CMakeFiles/MMBlib.dir/src/NtCForces.cpp.o   -L/usr/lib/aarch64-linux-gnu64  -L/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu  -Wl,-rpath,/usr/lib/aarch64-linux-gnu64:/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu: -lSimTKmolmodel /usr/lib/aarch64-linux-gnu/libSimTKsimbody.so.3.6 /usr/lib/aarch64-linux-gnu/libSimTKmath.so.3.6 /usr/lib/aarch64-linux-gnu/libSimTKcommon.so.3.6 -lOpenMM -llapack -lblas -ldl -lrt -lblas -llapack -lblas -llapack -lpthread -ldl -lrt -lm 
/usr/bin/cmake -E cmake_symlink_library libMMBlib.so.3.2 libMMBlib.so.3.2 libMMBlib.so
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/usr/bin/aarch64-linux-gnu-g++  -I/<<PKGBUILDDIR>>/include -I/usr/include/openmm -I/usr/include/openmm/reference -isystem /usr/include/simbody -D BuildNtC -D USE_OPENMM -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O0 -o CMakeFiles/MMB.dir/src/RNABuilder.cpp.o -c /<<PKGBUILDDIR>>/src/RNABuilder.cpp
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/<<PKGBUILDDIR>>/include/Utils.h:33:70: note: ‘#pragma message: using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined’
   33 | #pragma message ("using OpenMM::Vec3: USE_OPENMM_REALVEC NOT defined")
      |                                                                      ^
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
make[3]: Nothing to be done for 'CMakeFiles/MMB.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
[100%] Built target MMB
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu/CMakeFiles 0
make  -f CMakeFiles/Makefile2 preinstall
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
make[2]: Nothing to be done for 'preinstall'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libMMBlib.so.3.2
-- Set runtime path of "/<<PKGBUILDDIR>>/debian/tmp/usr/lib/libMMBlib.so.3.2" to ""
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libMMBlib.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/bin/MMB
-- Set runtime path of "/<<PKGBUILDDIR>>/debian/tmp/usr/bin/MMB" to ""
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/MMB/parameters.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/scripts
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/scripts/renumber.pl
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/scripts/renumber-loop.pl
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/scripts/parse-restraints.pl
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/scripts/format-for-pdb.awk
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/scripts/extract_FASTA.bak.awk
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/scripts/extract_FASTA.awk
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/scripts/b-factor-per-residue.pl
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/scripts/add-precision.awk
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/scripts/add-chain-IDs.pl
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/tRNA.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/protein-template.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/parameters.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.template_docking.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.template-docking.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.tRNA-fitting.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.singlebasepair.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.protein-morphing.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.protein-homology-modeling.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.long-chain-ID.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.hairpin-short.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.disulphide-bonded-cysteines.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.benzene.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.antibody-antigen.flexible-interfaces.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.TetR_threading_TUT.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.TetRB.scanning.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.TAR.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.RNA-homology-modeling.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.RBP-fitting.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.NMR.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.GlnBP-thermal-exploration.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.GNRA-NtC.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.DNA-helix.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.A_N.32.N.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/commands.A_N.32.G.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/antibody-antigen.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/TetRB.scanning.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/TetR.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/6TNA.short.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/5MRC.GNRA.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/2AVY.A.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/1mlc.DEF.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/1mlb.AB.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/1dpx.C.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/1WDN.short.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/1UAO.short.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/1UAO.atoms-renamed.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/1UAO-disre-simple.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/1GID.shifted.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/1GGG.short.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/1FC2.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/1FC2.C-to-A.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/1BA2.aligned.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/1ARJ.short.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/examples/.commands.GNRA-NtC.dat.swp
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
   debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install
dh_install -plibmmblib3.2  debian/tmp/usr/lib/libMMBlib.so.* usr/lib/aarch64-linux-gnu
dh_install -plibmmblib-dev debian/tmp/usr/lib/libMMBlib.so   usr/lib/aarch64-linux-gnu
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs -a
   dh_installchangelogs -a
   debian/rules override_dh_installman
make[1]: Entering directory '/<<PKGBUILDDIR>>'
a2x -d manpage -f manpage -D debian/tmp debian/MMB.1.asciidoc
a2x: ERROR: "xmllint" --nonet --noout --valid "/<<PKGBUILDDIR>>/debian/tmp/MMB.1.xml" returned non-zero exit status 4

make[1]: *** [debian/rules:22: override_dh_installman] Error 1
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:9: binary-arch] Error 2
dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2020-09-28T21:52:55Z

Finished
--------


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: amd64
Build Profiles: cross nocheck
Build Type: any
Build-Space: 467964
Build-Time: 309
Distribution: unstable
Fail-Stage: build
Foreign Architectures: arm64
Host Architecture: arm64
Install-Time: 36
Job: macromoleculebuilder_3.2+dfsg-1
Machine Architecture: amd64
Package: macromoleculebuilder
Package-Time: 358
Source-Version: 3.2+dfsg-1
Space: 467964
Status: attempted
Version: 3.2+dfsg-1
--------------------------------------------------------------------------------
Finished at 2020-09-28T21:52:55Z
Build needed 00:05:58, 467964k disk space