sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on gcc131.bak.milne.osuosl.org +==============================================================================+ | maffilter 1.3.1+dfsg-1 (mips64el) Sat, 18 May 2019 13:28:00 +0000 | +==============================================================================+ Package: maffilter Version: 1.3.1+dfsg-1 Source Version: 1.3.1+dfsg-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: mips64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-8a87208b-6052-410f-928b-923c6a7ab698' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [247 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-05-18-0810.13.pdiff [1742 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-05-18-0810.13.pdiff [599 B] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-05-18-0810.13.pdiff [1742 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-05-18-0810.13.pdiff [599 B] Get:6 http://debian.oregonstate.edu/debian unstable/main mips64el Packages [8029 kB] Fetched 8334 kB in 2s (4310 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'maffilter' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/maffilter.git Please use: git clone https://salsa.debian.org/med-team/maffilter.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 78.7 MB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main maffilter 1.3.1+dfsg-1 (dsc) [2210 B] Get:2 http://debian.oregonstate.edu/debian unstable/main maffilter 1.3.1+dfsg-1 (tar) [78.7 MB] Get:3 http://debian.oregonstate.edu/debian unstable/main maffilter 1.3.1+dfsg-1 (diff) [3400 B] Fetched 78.7 MB in 1s (72.0 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/maffilter-ZNp3H1/maffilter-1.3.1+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/maffilter-ZNp3H1' with '<>' +------------------------------------------------------------------------------+ | Install crossbuild-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64 Filtered Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64 dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-h80iII/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-h80iII/apt_archive ./ InRelease Get:2 copy:/<>/resolver-h80iII/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-h80iII/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-h80iII/apt_archive ./ Sources [364 B] Get:5 copy:/<>/resolver-h80iII/apt_archive ./ Packages [455 B] Fetched 1776 B in 0s (96.5 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils-mips64el-linux-gnuabi64 cpp-8-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el dpkg-cross file g++-8-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-8-cross-base gcc-8-mips64el-linux-gnuabi64 gcc-8-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 libatomic1-mips64el-cross libc6-dev-mips64el-cross libc6-mips64el-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-mips64el-cross libgcc1-mips64el-cross libgomp1-mips64el-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-mips64el-cross libstdc++6-mips64el-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-mips64el-cross sensible-utils ucf Suggested packages: binutils-doc gcc-8-locales cpp-doc binutils-multiarch g++-8-multilib-mips64el-linux-gnuabi64 gcc-8-doc libstdc++6-8-dbg-mips64el-cross gcc-8-multilib-mips64el-linux-gnuabi64 libgcc1-dbg-mips64el-cross libgomp1-dbg-mips64el-cross libitm1-dbg-mips64el-cross libatomic1-dbg-mips64el-cross libasan5-dbg-mips64el-cross liblsan0-dbg-mips64el-cross libtsan0-dbg-mips64el-cross libubsan1-dbg-mips64el-cross libmpx2-dbg-mips64el-cross libquadmath0-dbg-mips64el-cross manpages-dev autoconf automake libtool flex bison gdb-mips64el-linux-gnuabi64 gcc-doc libyaml-shell-perl Recommended packages: libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl The following NEW packages will be installed: binutils-mips64el-linux-gnuabi64 cpp-8-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el dpkg-cross file g++-8-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-8-cross-base gcc-8-mips64el-linux-gnuabi64 gcc-8-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 libatomic1-mips64el-cross libc6-dev-mips64el-cross libc6-mips64el-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-mips64el-cross libgcc1-mips64el-cross libgomp1-mips64el-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-mips64el-cross libstdc++6-mips64el-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-mips64el-cross sbuild-build-depends-core-dummy:mips64el sensible-utils ucf 0 upgraded, 42 newly installed, 0 to remove and 0 not upgraded. Need to get 40.4 MB of archives. After this operation, 151 MB of additional disk space will be used. Get:1 copy:/<>/resolver-h80iII/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [872 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.35-4 [242 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.35-4 [117 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.35-4 [66.3 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mips64el-linux-gnuabi64 amd64 2.31.1-16 [2489 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-mips64el-linux-gnuabi64-base amd64 8.3.0-7cross1 [191 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-8-mips64el-linux-gnuabi64 amd64 8.3.0-7cross1 [6277 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mips64el-linux-gnuabi64 amd64 4:8.3.0-1 [16.5 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-2 [39.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-cross-base all 8.3.0-7cross1 [186 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mips64el-cross all 2.28-10cross2 [1355 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-mips64el-cross all 1:8.3.0-7cross1 [68.8 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mips64el-cross all 8.3.0-7cross1 [66.0 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mips64el-cross all 8.3.0-7cross1 [7384 B] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-8-dev-mips64el-cross all 8.3.0-7cross1 [235 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-mips64el-linux-gnuabi64 amd64 8.3.0-7cross1 [6691 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mips64el-linux-gnuabi64 amd64 4:8.3.0-1 [1472 B] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mips64el-cross all 8.3.0-7cross1 [310 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mips64el-cross all 4.19.28-2cross2 [1240 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mips64el-cross all 2.28-10cross2 [2512 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-8-dev-mips64el-cross all 8.3.0-7cross1 [1559 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 g++-8-mips64el-linux-gnuabi64 amd64 8.3.0-7cross1 [6850 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mips64el-linux-gnuabi64 amd64 4:8.3.0-1 [1192 B] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.1-6 [8292 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.00+dfsg-1 [58.6 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1 [344 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.27-1 [66.8 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-2 [38.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-2 [49.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mips64el all 12.6 [6584 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 40.4 MB in 1s (65.2 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11942 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-3+b4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-3+b4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.35-4_amd64.deb ... Unpacking libmagic-mgc (1:5.35-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.35-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-4) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.35-4_amd64.deb ... Unpacking file (1:5.35-4) ... Selecting previously unselected package ucf. Preparing to unpack .../05-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... 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Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libfile-which-perl (1.23-1) ... Setting up libmagic-mgc (1:5.35-4) ... Setting up gcc-8-cross-base (8.3.0-7cross1) ... Setting up libmagic1:amd64 (1:5.35-4) ... Setting up libc6-mips64el-cross (2.28-10cross2) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up file (1:5.35-4) ... Setting up libyaml-perl (1.27-1) ... Setting up binutils-mips64el-linux-gnuabi64 (2.31.1-16) ... Setting up libicu63:amd64 (63.1-6) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cross-config (2.6.15-2) ... Setting up gcc-8-mips64el-linux-gnuabi64-base:amd64 (8.3.0-7cross1) ... Setting up sensible-utils (0.0.12) ... Setting up linux-libc-dev-mips64el-cross (4.19.28-2cross2) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libgomp1-mips64el-cross (8.3.0-7cross1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up cpp-8-mips64el-linux-gnuabi64 (8.3.0-7cross1) ... Setting up libatomic1-mips64el-cross (8.3.0-7cross1) ... Setting up libgcc1-mips64el-cross (1:8.3.0-7cross1) ... Setting up libc6-dev-mips64el-cross (2.28-10cross2) ... Setting up ucf (3.0038+nmu1) ... Setting up libstdc++6-mips64el-cross (8.3.0-7cross1) ... Setting up cpp-mips64el-linux-gnuabi64 (4:8.3.0-1) ... Setting up libgcc-8-dev-mips64el-cross (8.3.0-7cross1) ... Setting up libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++-8-dev-mips64el-cross (8.3.0-7cross1) ... Setting up gcc-8-mips64el-linux-gnuabi64 (8.3.0-7cross1) ... Setting up g++-8-mips64el-linux-gnuabi64 (8.3.0-7cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up gcc-mips64el-linux-gnuabi64 (4:8.3.0-1) ... Setting up g++-mips64el-linux-gnuabi64 (4:8.3.0-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-2) ... Setting up dpkg-cross (2.6.15-2) ... Setting up crossbuild-essential-mips64el (12.6) ... Setting up sbuild-build-depends-core-dummy:mips64el (0.invalid.0) ... Processing triggers for libc-bin (2.28-10) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mips64el included in any all) Setup apt archive ----------------- dpkg-deb: building package 'sbuild-build-depends-essential-dummy' in '/<>/resolver-h80iII/apt_archive/sbuild-build-depends-essential-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-h80iII/apt_archive ./ InRelease Get:2 copy:/<>/resolver-h80iII/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-h80iII/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-h80iII/apt_archive ./ Sources [484 B] Get:5 copy:/<>/resolver-h80iII/apt_archive ./ Packages [573 B] Fetched 2020 B in 0s (108 kB/s) Reading package lists... Reading package lists... Install essential build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-essential-dummy:mips64el 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 840 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-h80iII/apt_archive ./ sbuild-build-depends-essential-dummy 0.invalid.0 [840 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 840 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-essential-dummy:mips64el. (Reading database ... 15114 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-essential-dummy_0.invalid.0_mips64el.deb ... Unpacking sbuild-build-depends-essential-dummy:mips64el (0.invalid.0) ... Setting up sbuild-build-depends-essential-dummy:mips64el (0.invalid.0) ... +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), cmake, texinfo, libbpp-phyl-omics-dev (>= 2.4.1), libboost-iostreams-dev (>= 1.54.0), zlib1g-dev, libbz2-dev Filtered Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), cmake, texinfo, libbpp-phyl-omics-dev (>= 2.4.1), libboost-iostreams-dev (>= 1.54.0), zlib1g-dev, libbz2-dev dpkg-deb: building package 'sbuild-build-depends-maffilter-dummy' in '/<>/resolver-h80iII/apt_archive/sbuild-build-depends-maffilter-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-maffilter-dummy dpkg-scanpackages: info: Wrote 3 entries to output Packages file. Ign:1 copy:/<>/resolver-h80iII/apt_archive ./ InRelease Get:2 copy:/<>/resolver-h80iII/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-h80iII/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-h80iII/apt_archive ./ Sources [697 B] Get:5 copy:/<>/resolver-h80iII/apt_archive ./ Packages [784 B] Fetched 2444 B in 0s (134 kB/s) Reading package lists... Reading package lists... Install maffilter build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:mips64el gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libarchive13 libatomic1:mips64el libboost-iostreams-dev:mips64el libboost-iostreams1.67-dev:mips64el libboost-iostreams1.67.0:mips64el libboost-regex1.67-dev:mips64el libboost-regex1.67.0:mips64el libboost1.67-dev:mips64el libbpp-core-dev:mips64el libbpp-core4:mips64el libbpp-phyl-dev:mips64el libbpp-phyl-omics-dev:mips64el libbpp-phyl-omics3:mips64el libbpp-phyl12:mips64el libbpp-seq-dev:mips64el libbpp-seq-omics-dev:mips64el libbpp-seq-omics3:mips64el libbpp-seq12:mips64el libbsd0 libbz2-1.0:mips64el libbz2-dev:mips64el libc6:mips64el libc6-dev:mips64el libcroco3 libcurl4 libelf1 libexpat1 libfile-stripnondeterminism-perl libgcc-8-dev:mips64el libgcc1:mips64el libglib2.0-0 libgomp1:mips64el libgssapi-krb5-2 libicu-dev:mips64el libicu63:mips64el libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common libncurses6 libnghttp2-14 libpipeline1 libprocps7 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh2-1 libssl1.1 libstdc++-8-dev:mips64el libstdc++6:mips64el libtext-unidecode-perl libtool libuchardet0 libuv1 linux-libc-dev:mips64el lsb-base m4 man-db po-debconf procps tex-common texinfo zlib1g:mips64el zlib1g-dev:mips64el Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cmake-doc ninja-build dh-make gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libboost1.67-doc:mips64el libboost-atomic1.67-dev:mips64el libboost-chrono1.67-dev:mips64el libboost-container1.67-dev:mips64el libboost-date-time1.67-dev:mips64el libboost-exception1.67-dev:mips64el libboost-filesystem1.67-dev:mips64el libboost-graph1.67-dev:mips64el libboost-graph-parallel1.67-dev:mips64el libboost-locale1.67-dev:mips64el libboost-log1.67-dev:mips64el libboost-math1.67-dev:mips64el libboost-mpi1.67-dev:mips64el libboost-mpi-python1.67-dev:mips64el libboost-numpy1.67-dev:mips64el libboost-program-options1.67-dev:mips64el libboost-python1.67-dev:mips64el libboost-random1.67-dev:mips64el libboost-serialization1.67-dev:mips64el libboost-signals1.67-dev:mips64el libboost-stacktrace1.67-dev:mips64el libboost-system1.67-dev:mips64el libboost-test1.67-dev:mips64el libboost-thread1.67-dev:mips64el libboost-timer1.67-dev:mips64el libboost-type-erasure1.67-dev:mips64el libboost-wave1.67-dev:mips64el libboost1.67-tools-dev:mips64el libmpfrc++-dev:mips64el libntl-dev:mips64el glibc-doc:mips64el libc-l10n:mips64el locales:mips64el manpages-dev:mips64el krb5-doc krb5-user icu-doc:mips64el libstdc++-8-doc:mips64el libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl texlive-base texlive-latex-base texlive-generic-recommended texinfo-doc-nonfree texlive-fonts-recommended Recommended packages: curl | wget | lynx bzip2-doc:mips64el libidn2-0:mips64el ca-certificates libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales libgpm2 publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:mips64el gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libarchive13 libatomic1:mips64el libboost-iostreams-dev:mips64el libboost-iostreams1.67-dev:mips64el libboost-iostreams1.67.0:mips64el libboost-regex1.67-dev:mips64el libboost-regex1.67.0:mips64el libboost1.67-dev:mips64el libbpp-core-dev:mips64el libbpp-core4:mips64el libbpp-phyl-dev:mips64el libbpp-phyl-omics-dev:mips64el libbpp-phyl-omics3:mips64el libbpp-phyl12:mips64el libbpp-seq-dev:mips64el libbpp-seq-omics-dev:mips64el libbpp-seq-omics3:mips64el libbpp-seq12:mips64el libbsd0 libbz2-1.0:mips64el libbz2-dev:mips64el libc6:mips64el libc6-dev:mips64el libcroco3 libcurl4 libelf1 libexpat1 libfile-stripnondeterminism-perl libgcc-8-dev:mips64el libgcc1:mips64el libglib2.0-0 libgomp1:mips64el libgssapi-krb5-2 libicu-dev:mips64el libicu63:mips64el libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common libncurses6 libnghttp2-14 libpipeline1 libprocps7 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh2-1 libssl1.1 libstdc++-8-dev:mips64el libstdc++6:mips64el libtext-unidecode-perl libtool libuchardet0 libuv1 linux-libc-dev:mips64el lsb-base m4 man-db po-debconf procps sbuild-build-depends-maffilter-dummy:mips64el tex-common texinfo zlib1g:mips64el zlib1g-dev:mips64el 0 upgraded, 89 newly installed, 0 to remove and 0 not upgraded. Need to get 65.6 MB of archives. After this operation, 456 MB of additional disk space will be used. Get:1 copy:/<>/resolver-h80iII/apt_archive ./ sbuild-build-depends-maffilter-dummy 0.invalid.0 [944 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.9.1-2 [99.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 tex-common all 6.11 [53.1 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20181013-2 [102 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libprocps7 amd64 2:3.3.15-2 [61.7 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 lsb-base all 10.2019051400 [28.4 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 procps amd64 2:3.3.15-2 [259 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 cmake-data all 3.13.4-1 [1476 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive13 amd64 3.3.3-4 [314 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libkeyutils1 amd64 1.6-6 [15.0 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5support0 amd64 1.17-2 [65.6 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libk5crypto3 amd64 1.17-2 [121 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1b-2 [1530 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5-3 amd64 1.17-2 [368 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.17-2 [158 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-1 [69.0 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-2 amd64 2.1.27+dfsg-1 [106 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-common all 2.4.47+dfsg-3 [89.4 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-2.4-2 amd64 2.4.47+dfsg-3 [224 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libnghttp2-14 amd64 1.37.0-1 [83.3 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libpsl5 amd64 0.20.2-2 [53.7 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2 [60.5 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libssh2-1 amd64 1.8.0-2.1 [140 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libcurl4 amd64 7.64.0-3 [331 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.2.6-1 [105 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3 [75.6 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 librhash0 amd64 1.3.8-1 [122 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libuv1 amd64 1.24.1-1 [110 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 cmake amd64 3.13.4-1 [3480 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-10 [547 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1 [160 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.12-3 [78.0 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.58.3-1 [1258 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.1.1 [1016 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main mips64el gcc-8-base mips64el 8.3.0-7 [191 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 icu-devtools amd64 63.1-6 [188 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc1 mips64el 1:8.3.0-7 [68.5 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main mips64el libc6 mips64el 2.28-10 [2562 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main mips64el libatomic1 mips64el 8.3.0-7 [7432 B] Get:60 http://debian.oregonstate.edu/debian unstable/main mips64el libgomp1 mips64el 8.3.0-7 [67.3 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-8-dev mips64el 8.3.0-7 [234 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++6 mips64el 8.3.0-7 [348 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main mips64el linux-libc-dev mips64el 4.19.37-3 [1178 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main mips64el libc6-dev mips64el 2.28-10 [2513 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++-8-dev mips64el 8.3.0-7 [1573 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main mips64el libboost1.67-dev mips64el 1.67.0-13 [8386 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main mips64el libicu63 mips64el 63.1-6 [8178 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-regex1.67.0 mips64el 1.67.0-13 [452 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main mips64el libicu-dev mips64el 63.1-6 [9348 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-regex1.67-dev mips64el 1.67.0-13 [557 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main mips64el libbz2-1.0 mips64el 1.0.6-9 [46.3 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main mips64el zlib1g mips64el 1:1.2.11.dfsg-1 [91.1 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-iostreams1.67.0 mips64el 1.67.0-13 [246 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-iostreams1.67-dev mips64el 1.67.0-13 [258 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-iostreams-dev mips64el 1.67.0.1 [3636 B] Get:76 http://debian.oregonstate.edu/debian unstable/main mips64el libbpp-core4 mips64el 2.4.1-3 [504 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main mips64el libbpp-core-dev mips64el 2.4.1-3 [1033 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main mips64el libbpp-seq12 mips64el 2.4.1-3 [419 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main mips64el libbpp-phyl12 mips64el 2.4.1-2 [1374 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main mips64el libbpp-seq-dev mips64el 2.4.1-3 [824 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main mips64el libbpp-phyl-dev mips64el 2.4.1-2 [3247 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main mips64el libbpp-seq-omics3 mips64el 2.4.1-3 [189 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main mips64el libbpp-phyl-omics3 mips64el 2.4.1-1 [65.0 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main mips64el libbpp-seq-omics-dev mips64el 2.4.1-3 [418 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main mips64el libbpp-phyl-omics-dev mips64el 2.4.1-1 [130 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main mips64el libbz2-dev mips64el 1.0.6-9 [33.0 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-unidecode-perl all 1.30-1 [103 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 texinfo amd64 6.5.0.dfsg.1-5 [1429 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main mips64el zlib1g-dev mips64el 1:1.2.11.dfsg-1 [215 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 65.6 MB in 4s (18.3 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 15114 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package tex-common. 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Setting up libboost1.67-dev:mips64el (1.67.0-13) ... Setting up libicu63:mips64el (63.1-6) ... Setting up libbpp-core4:mips64el (2.4.1-3) ... Setting up libboost-iostreams1.67.0:mips64el (1.67.0-13) ... Setting up libbpp-seq12:mips64el (2.4.1-3) ... Setting up libicu-dev:mips64el (63.1-6) ... Setting up libbpp-phyl12:mips64el (2.4.1-2) ... Setting up libboost-regex1.67.0:mips64el (1.67.0-13) ... Setting up libbpp-seq-omics3:mips64el (2.4.1-3) ... Setting up libboost-regex1.67-dev:mips64el (1.67.0-13) ... Setting up libbpp-core-dev:mips64el (2.4.1-3) ... Setting up libbpp-phyl-omics3:mips64el (2.4.1-1) ... Setting up libboost-iostreams1.67-dev:mips64el (1.67.0-13) ... Setting up libbpp-seq-dev:mips64el (2.4.1-3) ... Setting up libboost-iostreams-dev:mips64el (1.67.0.1) ... Setting up libbpp-phyl-dev:mips64el (2.4.1-2) ... Setting up libbpp-seq-omics-dev:mips64el (2.4.1-3) ... Setting up libbpp-phyl-omics-dev:mips64el (2.4.1-1) ... Setting up sbuild-build-depends-maffilter-dummy:mips64el (0.invalid.0) ... Processing triggers for libc-bin (2.28-10) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.31.1-16 dpkg-dev_1.19.6 g++-8_8.3.0-7 gcc-8_8.3.0-7 libc6-dev_2.28-10 libstdc++-8-dev_8.3.0-7 libstdc++-8-dev-mips64el-cross_8.3.0-7cross1 libstdc++6_8.3.0-7 libstdc++6-mips64el-cross_8.3.0-7cross1 linux-libc-dev_4.19.37-3 Package versions: adduser_3.118 apt_1.8.1 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.3 base-passwd_3.5.46 bash_5.0-4 binutils_2.31.1-16 binutils-common_2.31.1-16 binutils-mips64el-linux-gnuabi64_2.31.1-16 binutils-x86-64-linux-gnu_2.31.1-16 bsdmainutils_11.1.2+b1 bsdutils_1:2.33.1-0.1 build-essential_12.6 bzip2_1.0.6-9 cmake_3.13.4-1 cmake-data_3.13.4-1 coreutils_8.30-3 cpp_4:8.3.0-1 cpp-8_8.3.0-7 cpp-8-mips64el-linux-gnuabi64_8.3.0-7cross1 cpp-mips64el-linux-gnuabi64_4:8.3.0-1 cross-config_2.6.15-2 crossbuild-essential-mips64el_12.6 dash_0.5.10.2-5 debconf_1.5.72 debhelper_12.1.1 debian-archive-keyring_2019.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-strip-nondeterminism_1.1.2-1 diffutils_1:3.7-3 dpkg_1.19.6 dpkg-cross_2.6.15-2 dpkg-dev_1.19.6 dwz_0.12-3 e2fsprogs_1.45.1-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-4 findutils_4.6.0+git+20190209-2 g++_4:8.3.0-1 g++-8_8.3.0-7 g++-8-mips64el-linux-gnuabi64_8.3.0-7cross1 g++-mips64el-linux-gnuabi64_4:8.3.0-1 gcc_4:8.3.0-1 gcc-8_8.3.0-7 gcc-8-base_8.3.0-7 gcc-8-cross-base_8.3.0-7cross1 gcc-8-mips64el-linux-gnuabi64_8.3.0-7cross1 gcc-8-mips64el-linux-gnuabi64-base_8.3.0-7cross1 gcc-mips64el-linux-gnuabi64_4:8.3.0-1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.13-2 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 hostname_3.21 icu-devtools_63.1-6 init-system-helpers_1.56+nmu1 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-4 libapt-pkg5.0_1.8.1 libarchive-zip-perl_1.64-1 libarchive13_3.3.3-4 libasan5_8.3.0-7 libatomic1_8.3.0-7 libatomic1-mips64el-cross_8.3.0-7cross1 libattr1_1:2.4.48-4 libaudit-common_1:2.8.4-3 libaudit1_1:2.8.4-3 libbinutils_2.31.1-16 libblkid1_2.33.1-0.1 libboost-iostreams-dev_1.67.0.1 libboost-iostreams1.67-dev_1.67.0-13 libboost-iostreams1.67.0_1.67.0-13 libboost-regex1.67-dev_1.67.0-13 libboost-regex1.67.0_1.67.0-13 libboost1.67-dev_1.67.0-13 libbpp-core-dev_2.4.1-3 libbpp-core4_2.4.1-3 libbpp-phyl-dev_2.4.1-2 libbpp-phyl-omics-dev_2.4.1-1 libbpp-phyl-omics3_2.4.1-1 libbpp-phyl12_2.4.1-2 libbpp-seq-dev_2.4.1-3 libbpp-seq-omics-dev_2.4.1-3 libbpp-seq-omics3_2.4.1-3 libbpp-seq12_2.4.1-3 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9 libbz2-dev_1.0.6-9 libc-bin_2.28-10 libc-dev-bin_2.28-10 libc6_2.28-10 libc6-dev_2.28-10 libc6-dev-mips64el-cross_2.28-10cross2 libc6-mips64el-cross_2.28-10cross2 libcap-ng0_0.7.9-2 libcc1-0_8.3.0-7 libcom-err2_1.45.1-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.12-3 libcurl4_7.64.0-3 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.249 libdebian-dpkgcross-perl_2.6.15-2 libdpkg-perl_1.19.6 libelf1_0.176-1 libexpat1_2.2.6-1 libext2fs2_1.45.1-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.1.2-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-7 libgcc-8-dev-mips64el-cross_8.3.0-7cross1 libgcc1_1:8.3.0-7 libgcc1-mips64el-cross_1:8.3.0-7cross1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-4 libgdbm6_1.18.1-4 libglib2.0-0_2.58.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.7-2 libgomp1_8.3.0-7 libgomp1-mips64el-cross_8.3.0-7cross1 libgpg-error0_1.35-1 libgssapi-krb5-2_1.17-2 libhogweed4_3.4.1-1 libicu-dev_63.1-6 libicu63_63.1-6 libidn2-0_2.0.5-1 libio-string-perl_1.08-3 libisl19_0.20-2 libitm1_8.3.0-7 libjsoncpp1_1.7.4-3 libk5crypto3_1.17-2 libkeyutils1_1.6-6 libkrb5-3_1.17-2 libkrb5support0_1.17-2 libldap-2.4-2_2.4.47+dfsg-3 libldap-common_2.4.47+dfsg-3 liblocale-gettext-perl_1.07-3+b4 liblsan0_8.3.0-7 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-4 libmagic1_1:5.35-4 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-7 libncurses6_6.1+20181013-2 libncursesw6_6.1+20181013-2 libnettle6_3.4.1-1 libnghttp2-14_1.37.0-1 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre3_2:8.39-12 libperl5.28_5.28.1-6 libpipeline1_1.5.1-2 libprocps7_2:3.3.15-2 libpsl5_0.20.2-2 libquadmath0_8.3.0-7 librhash0_1.3.8-1 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27+dfsg-1 libsasl2-modules-db_2.1.27+dfsg-1 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libss2_1.45.1-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1b-2 libstdc++-8-dev_8.3.0-7 libstdc++-8-dev-mips64el-cross_8.3.0-7cross1 libstdc++6_8.3.0-7 libstdc++6-mips64el-cross_8.3.0-7cross1 libsystemd0_241-4 libtasn1-6_4.13-3 libtext-unidecode-perl_1.30-1 libtinfo6_6.1+20181013-2 libtool_2.4.6-10 libtsan0_8.3.0-7 libubsan1_8.3.0-7 libuchardet0_0.0.6-3 libudev1_241-4 libunistring2_0.9.10-1 libuuid1_2.33.1-0.1 libuv1_1.24.1-1 libxml-libxml-perl_2.0134+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.00+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-perl_1.27-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.37-3 linux-libc-dev-mips64el-cross_4.19.28-2cross2 login_1:4.5-1.1 lsb-base_10.2019051400 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17+b3 mount_2.33.1-0.1 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-6 perl-base_5.28.1-6 perl-modules-5.28_5.28.1-6 po-debconf_1.0.21 procps_2:3.3.15-2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-essential-dummy_0.invalid.0 sbuild-build-depends-maffilter-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-8 tar_1.30+dfsg-6 tex-common_6.11 texinfo_6.5.0.dfsg.1-5 tzdata_2019a-1 ucf_3.0038+nmu1 util-linux_2.33.1-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Thu Aug 23 20:10:02 2018 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tillea@rki.de" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./maffilter_1.3.1+dfsg-1.dsc dpkg-source: info: extracting maffilter in /<>/maffilter-1.3.1+dfsg dpkg-source: info: unpacking maffilter_1.3.1+dfsg.orig.tar.xz dpkg-source: info: unpacking maffilter_1.3.1+dfsg-1.debian.tar.xz Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mips64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-8a87208b-6052-410f-928b-923c6a7ab698 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package maffilter dpkg-buildpackage: info: source version 1.3.1+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Julien Dutheil dpkg-architecture: warning: specified GNU system type mips64el-linux-gnuabi64 does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mips64el fakeroot debian/rules clean dh clean dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>/maffilter-1.3.1+dfsg' dh_auto_configure -- -DCMAKE_BUILD_TYPE=RelWithDebInfo cd obj-mips64el-linux-gnuabi64 && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=mips64el -DCMAKE_C_COMPILER=mips64el-linux-gnuabi64-gcc -DCMAKE_CXX_COMPILER=mips64el-linux-gnuabi64-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/mips64el-linux-gnuabi64-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/mips64el-linux-gnuabi64-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/mips64el-linux-gnuabi64-qmake -DCMAKE_INSTALL_LIBDIR=lib/mips64el-linux-gnuabi64 -DCMAKE_BUILD_TYPE=RelWithDebInfo .. -- The CXX compiler identification is GNU 8.3.0 -- Check for working CXX compiler: /usr/bin/mips64el-linux-gnuabi64-g++ -- Check for working CXX compiler: /usr/bin/mips64el-linux-gnuabi64-g++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found /bin/gzip compression program, using file extension .gz -- bpp-core 4.1.0 found: -- static lib: /usr/lib/mips64el-linux-gnuabi64/libbpp-core.a -- shared lib: /usr/lib/mips64el-linux-gnuabi64/libbpp-core.so.4.1.0 -- includes: /usr/include -- bpp-seq 12.0.0 found: -- static lib: /usr/lib/mips64el-linux-gnuabi64/libbpp-seq.a -- shared lib: /usr/lib/mips64el-linux-gnuabi64/libbpp-seq.so.12.0.0 -- includes: /usr/include -- bpp-seq-omics 3.0.0 found: -- static lib: /usr/lib/mips64el-linux-gnuabi64/libbpp-seq-omics.a -- shared lib: /usr/lib/mips64el-linux-gnuabi64/libbpp-seq-omics.so.3.0.0 -- includes: /usr/include -- bpp-phyl 12.0.0 found: -- static lib: /usr/lib/mips64el-linux-gnuabi64/libbpp-phyl.a -- shared lib: /usr/lib/mips64el-linux-gnuabi64/libbpp-phyl.so.12.0.0 -- includes: /usr/include -- bpp-phyl-omics 3.0.0 found: -- static lib: /usr/lib/mips64el-linux-gnuabi64/libbpp-phyl-omics.a -- shared lib: /usr/lib/mips64el-linux-gnuabi64/libbpp-phyl-omics.so.3.0.0 -- includes: /usr/include -- Boost version: 1.67.0 -- Found the following Boost libraries: -- iostreams -- regex -- Boost libraries found here: includes: /usr/include dynamic libraries: /usr/lib/mips64el-linux-gnuabi64/libboost_iostreams.so;/usr/lib/mips64el-linux-gnuabi64/libboost_regex.so -- Library z found here: includes: /usr/include dynamic libraries: /usr/lib/mips64el-linux-gnuabi64/libz.so -- Library bz2 found here: includes: /usr/include dynamic libraries: /usr/lib/mips64el-linux-gnuabi64/libbz2.so -- Found /usr/bin/makeinfo: 'info' and 'html' target enabled (builds info/html doc) -- Found texi2dvi: 'pdf' target enabled (builds pdf doc) -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_COMPILER CMAKE_EXPORT_NO_PACKAGE_REGISTRY PKGCONFIG_EXECUTABLE PKG_CONFIG_EXECUTABLE QMAKE_EXECUTABLE -- Build files have been written to: /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64 make[1]: Leaving directory '/<>/maffilter-1.3.1+dfsg' dh_auto_build -a cd obj-mips64el-linux-gnuabi64 && make -j1 PKG_CONFIG=mips64el-linux-gnuabi64-pkg-config CXX=mips64el-linux-gnuabi64-g\+\+ CC=mips64el-linux-gnuabi64-gcc make[1]: Entering directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' /usr/bin/cmake -S/<>/maffilter-1.3.1+dfsg -B/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/CMakeFiles /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' make -f MafFilter/CMakeFiles/maffilter.dir/build.make MafFilter/CMakeFiles/maffilter.dir/depend make[3]: Entering directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' cd /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/maffilter-1.3.1+dfsg /<>/maffilter-1.3.1+dfsg/MafFilter /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64 /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/MafFilter /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/MafFilter/CMakeFiles/maffilter.dir/DependInfo.cmake --color= Scanning dependencies of target maffilter make[3]: Leaving directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' make -f MafFilter/CMakeFiles/maffilter.dir/build.make MafFilter/CMakeFiles/maffilter.dir/build make[3]: Entering directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' [ 12%] Building CXX object MafFilter/CMakeFiles/maffilter.dir/MafFilter.cpp.o cd /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/MafFilter && /usr/bin/mips64el-linux-gnuabi64-g++ -std=c++11 -Wall -Weffc++ -Wshadow -O2 -g -DNDEBUG -o CMakeFiles/maffilter.dir/MafFilter.cpp.o -c /<>/maffilter-1.3.1+dfsg/MafFilter/MafFilter.cpp [ 25%] Building CXX object MafFilter/CMakeFiles/maffilter.dir/OutputAsFeaturesMafIterator.cpp.o cd /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/MafFilter && /usr/bin/mips64el-linux-gnuabi64-g++ -std=c++11 -Wall -Weffc++ -Wshadow -O2 -g -DNDEBUG -o CMakeFiles/maffilter.dir/OutputAsFeaturesMafIterator.cpp.o -c /<>/maffilter-1.3.1+dfsg/MafFilter/OutputAsFeaturesMafIterator.cpp [ 37%] Building CXX object MafFilter/CMakeFiles/maffilter.dir/SystemCallMafIterator.cpp.o cd /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/MafFilter && /usr/bin/mips64el-linux-gnuabi64-g++ -std=c++11 -Wall -Weffc++ -Wshadow -O2 -g -DNDEBUG -o CMakeFiles/maffilter.dir/SystemCallMafIterator.cpp.o -c /<>/maffilter-1.3.1+dfsg/MafFilter/SystemCallMafIterator.cpp [ 50%] Building CXX object MafFilter/CMakeFiles/maffilter.dir/TreeBuildingSystemCallMafIterator.cpp.o cd /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/MafFilter && /usr/bin/mips64el-linux-gnuabi64-g++ -std=c++11 -Wall -Weffc++ -Wshadow -O2 -g -DNDEBUG -o CMakeFiles/maffilter.dir/TreeBuildingSystemCallMafIterator.cpp.o -c /<>/maffilter-1.3.1+dfsg/MafFilter/TreeBuildingSystemCallMafIterator.cpp [ 62%] Linking CXX executable maffilter cd /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/MafFilter && /usr/bin/cmake -E cmake_link_script CMakeFiles/maffilter.dir/link.txt --verbose=1 /usr/bin/mips64el-linux-gnuabi64-g++ -std=c++11 -Wall -Weffc++ -Wshadow -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/maffilter.dir/MafFilter.cpp.o CMakeFiles/maffilter.dir/OutputAsFeaturesMafIterator.cpp.o CMakeFiles/maffilter.dir/SystemCallMafIterator.cpp.o CMakeFiles/maffilter.dir/TreeBuildingSystemCallMafIterator.cpp.o -o maffilter /usr/lib/mips64el-linux-gnuabi64/libbpp-phyl-omics.so.3.0.0 -lboost_iostreams -lboost_regex -lz -lbz2 /usr/lib/mips64el-linux-gnuabi64/libbpp-seq-omics.so.3.0.0 /usr/lib/mips64el-linux-gnuabi64/libbpp-phyl.so.12.0.0 /usr/lib/mips64el-linux-gnuabi64/libbpp-seq.so.12.0.0 /usr/lib/mips64el-linux-gnuabi64/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' [ 62%] Built target maffilter make -f doc/CMakeFiles/info.dir/build.make doc/CMakeFiles/info.dir/depend make[3]: Entering directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' cd /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/maffilter-1.3.1+dfsg /<>/maffilter-1.3.1+dfsg/doc /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64 /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/doc /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/doc/CMakeFiles/info.dir/DependInfo.cmake --color= Scanning dependencies of target info make[3]: Leaving directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' make -f doc/CMakeFiles/info.dir/build.make doc/CMakeFiles/info.dir/build make[3]: Entering directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' [ 75%] Generating info page cd /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/doc && /usr/bin/makeinfo --no-split -o /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/doc/maffilter.info /<>/maffilter-1.3.1+dfsg/doc/maffilter.texi [ 87%] Compressing info page cd /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/doc && /bin/gzip -c -n -9 /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/doc/maffilter.info > /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/doc/maffilter.info.gz make[3]: Leaving directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' [ 87%] Built target info make -f man/CMakeFiles/man.dir/build.make man/CMakeFiles/man.dir/depend make[3]: Entering directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' cd /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/maffilter-1.3.1+dfsg /<>/maffilter-1.3.1+dfsg/man /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64 /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/man /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/man/CMakeFiles/man.dir/DependInfo.cmake --color= Scanning dependencies of target man make[3]: Leaving directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' make -f man/CMakeFiles/man.dir/build.make man/CMakeFiles/man.dir/build make[3]: Entering directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' [100%] Compressing manpage maffilter.1 cd /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/man && /bin/gzip -c -n -9 /<>/maffilter-1.3.1+dfsg/man/maffilter.1 > /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/man/maffilter.1.gz make[3]: Leaving directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' [100%] Built target man make[2]: Leaving directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' /usr/bin/cmake -E cmake_progress_start /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/CMakeFiles 0 make[1]: Leaving directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_auto_install -a cd obj-mips64el-linux-gnuabi64 && make -j1 install DESTDIR=/<>/maffilter-1.3.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' /usr/bin/cmake -S/<>/maffilter-1.3.1+dfsg -B/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/CMakeFiles /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' make -f MafFilter/CMakeFiles/maffilter.dir/build.make MafFilter/CMakeFiles/maffilter.dir/depend make[3]: Entering directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' cd /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/maffilter-1.3.1+dfsg /<>/maffilter-1.3.1+dfsg/MafFilter /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64 /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/MafFilter /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/MafFilter/CMakeFiles/maffilter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' make -f MafFilter/CMakeFiles/maffilter.dir/build.make MafFilter/CMakeFiles/maffilter.dir/build make[3]: Entering directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' make[3]: Nothing to be done for 'MafFilter/CMakeFiles/maffilter.dir/build'. make[3]: Leaving directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' [ 62%] Built target maffilter make -f doc/CMakeFiles/info.dir/build.make doc/CMakeFiles/info.dir/depend make[3]: Entering directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' cd /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/maffilter-1.3.1+dfsg /<>/maffilter-1.3.1+dfsg/doc /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64 /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/doc /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/doc/CMakeFiles/info.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' make -f doc/CMakeFiles/info.dir/build.make doc/CMakeFiles/info.dir/build make[3]: Entering directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' make[3]: Nothing to be done for 'doc/CMakeFiles/info.dir/build'. make[3]: Leaving directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' [ 87%] Built target info make -f man/CMakeFiles/man.dir/build.make man/CMakeFiles/man.dir/depend make[3]: Entering directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' cd /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/maffilter-1.3.1+dfsg /<>/maffilter-1.3.1+dfsg/man /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64 /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/man /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/man/CMakeFiles/man.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' make -f man/CMakeFiles/man.dir/build.make man/CMakeFiles/man.dir/build make[3]: Entering directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' make[3]: Nothing to be done for 'man/CMakeFiles/man.dir/build'. make[3]: Leaving directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' [100%] Built target man make[2]: Leaving directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' /usr/bin/cmake -E cmake_progress_start /<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Installing: /<>/maffilter-1.3.1+dfsg/debian/tmp/usr/bin/maffilter -- Installing: /<>/maffilter-1.3.1+dfsg/debian/tmp/usr/share/info/maffilter.info.gz -- Installing: /<>/maffilter-1.3.1+dfsg/debian/tmp/usr/share/man/man1/maffilter.1.gz make[1]: Leaving directory '/<>/maffilter-1.3.1+dfsg/obj-mips64el-linux-gnuabi64' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a debian/rules override_dh_fixperms make[1]: Entering directory '/<>/maffilter-1.3.1+dfsg' dh_fixperms find debian/*/usr/share -name "*.bpp" -executable -exec chmod -x \{\} \; make[1]: Leaving directory '/<>/maffilter-1.3.1+dfsg' dh_missing -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/maffilter/usr/bin/maffilter was not linked against libz.so.1 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/maffilter/usr/bin/maffilter was not linked against libbz2.so.1.0 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/maffilter/usr/bin/maffilter was not linked against libboost_regex.so.1.67.0 (it uses none of the library's symbols) dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'maffilter' in '../maffilter_1.3.1+dfsg-1_mips64el.deb'. dpkg-deb: building package 'maffilter-dbgsym' in '../maffilter-dbgsym_1.3.1+dfsg-1_mips64el.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../maffilter_1.3.1+dfsg-1_mips64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-05-18T13:30:20Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/resolver-h80iII/apt_archive/sbuild-build-depends-lintian-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-lintian-dummy sbuild-build-depends-maffilter-dummy dpkg-scanpackages: info: Wrote 4 entries to output Packages file. Ign:1 copy:/<>/resolver-h80iII/apt_archive ./ InRelease Get:2 copy:/<>/resolver-h80iII/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-h80iII/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-h80iII/apt_archive ./ Sources [818 B] Get:5 copy:/<>/resolver-h80iII/apt_archive ./ Packages [897 B] Fetched 2678 B in 0s (144 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libdata-dump-perl ca-certificates libhtml-template-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libunicode-utf8-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:mips64el t1utils 0 upgraded, 47 newly installed, 0 to remove and 0 not upgraded. Need to get 6231 kB of archives. After this operation, 16.6 MB of additional disk space will be used. Get:1 copy:/<>/resolver-h80iII/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 5.6 [19.4 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 7.0-5 [70.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.62-1 [33.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.2-1 [49.4 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.13-2 [512 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.27.2-2 [640 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.13-2 [866 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.34+b1 [71.2 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.40-1 [222 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.21-1+b3 [13.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.41-1+b1 [14.6 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 3 [6782 B] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.85-2+b1 [308 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.060-3 [207 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.18-1 [88.5 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.19-1 [372 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.39-1 [74.5 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.72-1 [262 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b5 [33.7 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-1 [101 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b4 [64.2 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libparse-debianchangelog-perl all 1.2.0-13 [59.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.76+repack-1 [33.1 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2 [90.4 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.13.0 [1175 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 6231 kB in 0s (28.1 MB/s) Selecting previously unselected package netbase. (Reading database ... 36737 files and directories currently installed.) Preparing to unpack .../00-netbase_5.6_all.deb ... Unpacking netbase (5.6) ... Selecting previously unselected package readline-common. Preparing to unpack .../01-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.62-1_amd64.deb ... Unpacking diffstat (1.62-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.2-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.2-1) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../04-libreadline7_7.0-5_amd64.deb ... Unpacking libreadline7:amd64 (7.0-5) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.13-2_amd64.deb ... Unpacking gpgconf (2.2.13-2) ... Selecting previously unselected package libsqlite3-0:amd64. 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Preparing to unpack .../46-sbuild-build-depends-lintian-dummy_0.invalid.0_mips64el.deb ... Unpacking sbuild-build-depends-lintian-dummy:mips64el (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.34+b1) ... Setting up libstruct-dumb-perl (0.09-1) ... Setting up libio-pty-perl (1:1.08-1.1+b5) ... Setting up libclone-perl (0.41-1+b1) ... Setting up libyaml-0-2:amd64 (0.2.1-1) ... Setting up libhtml-tagset-perl (3.20-3) ... Setting up libsqlite3-0:amd64 (3.27.2-2) ... Setting up libfuture-perl (0.39-1) ... Setting up libyaml-libyaml-perl (0.76+repack-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up perl-openssl-defaults:amd64 (3) ... Setting up libtext-levenshtein-perl (0.13-1) ... Setting up libassuan0:amd64 (2.5.2-1) ... Setting up libio-async-perl (0.72-1) ... Setting up patchutils (0.3.4-2) ... Setting up libdigest-hmac-perl (1.03+dfsg-2) ... Setting up libipc-system-simple-perl (1.25-4) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up t1utils (1.41-3) ... 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Setting up libmailtools-perl (2.18-1) ... Setting up libparse-debianchangelog-perl (1.2.0-13) ... Setting up libemail-valid-perl (1.202-1) ... Setting up lintian (2.13.0) ... Setting up sbuild-build-depends-lintian-dummy:mips64el (0.invalid.0) ... Processing triggers for man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.28-10) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ maffilter_1.3.1+dfsg-1_mips64el.changes: ---------------------------------------- Format: 1.8 Date: Wed, 22 Aug 2018 11:39:47 +0200 Source: maffilter Binary: maffilter maffilter-dbgsym Built-For-Profiles: cross nocheck Architecture: mips64el Version: 1.3.1+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Julien Dutheil Description: maffilter - process genome alignment in the Multiple Alignment Format Changes: maffilter (1.3.1+dfsg-1) unstable; urgency=medium . [ Julien Dutheil ] * New upstream version. . [ Andreas Tille ] * Standards-Version: 4.2.0 Checksums-Sha1: beaaa900bdcb05f5184ee901ec49193aeab87bc7 3652876 maffilter-dbgsym_1.3.1+dfsg-1_mips64el.deb d8af9d303da88dea9c0ff1db51083bddc80a1698 6323 maffilter_1.3.1+dfsg-1_mips64el.buildinfo 60fe1c16772977cd35d89225dbe64de1e96bd6ba 183340 maffilter_1.3.1+dfsg-1_mips64el.deb Checksums-Sha256: 31330e9d03c6f1074ecabfae3577454461fdd11c317c7fe9d7ff808327f64ec5 3652876 maffilter-dbgsym_1.3.1+dfsg-1_mips64el.deb 74648961f500f778b872bc645ab73cb2bdf3d96aa4b771d3c185319e09654695 6323 maffilter_1.3.1+dfsg-1_mips64el.buildinfo 74c3661cdbc7376d80c2c9305811d8c47df66aaa9f8b396c8335637ecdf2e9fb 183340 maffilter_1.3.1+dfsg-1_mips64el.deb Files: c1ab63f004a873cc2a26da247a08679e 3652876 debug optional maffilter-dbgsym_1.3.1+dfsg-1_mips64el.deb e456d83d7ecfdb54943b8dc90d1787a2 6323 science optional maffilter_1.3.1+dfsg-1_mips64el.buildinfo 3d0b5baf946c3c2c068b150a8a517608 183340 science optional maffilter_1.3.1+dfsg-1_mips64el.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: maffilter Binary: maffilter maffilter-examples Architecture: mips64el Version: 1.3.1+dfsg-1 Checksums-Md5: c1ab63f004a873cc2a26da247a08679e 3652876 maffilter-dbgsym_1.3.1+dfsg-1_mips64el.deb 3d0b5baf946c3c2c068b150a8a517608 183340 maffilter_1.3.1+dfsg-1_mips64el.deb Checksums-Sha1: beaaa900bdcb05f5184ee901ec49193aeab87bc7 3652876 maffilter-dbgsym_1.3.1+dfsg-1_mips64el.deb 60fe1c16772977cd35d89225dbe64de1e96bd6ba 183340 maffilter_1.3.1+dfsg-1_mips64el.deb Checksums-Sha256: 31330e9d03c6f1074ecabfae3577454461fdd11c317c7fe9d7ff808327f64ec5 3652876 maffilter-dbgsym_1.3.1+dfsg-1_mips64el.deb 74c3661cdbc7376d80c2c9305811d8c47df66aaa9f8b396c8335637ecdf2e9fb 183340 maffilter_1.3.1+dfsg-1_mips64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sat, 18 May 2019 13:30:19 +0000 Build-Path: /<>/maffilter-1.3.1+dfsg Installed-Build-Depends: autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 10.3), base-passwd (= 3.5.46), bash (= 5.0-4), binutils (= 2.31.1-16), binutils-common (= 2.31.1-16), binutils-x86-64-linux-gnu (= 2.31.1-16), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.33.1-0.1), build-essential (= 12.6), bzip2 (= 1.0.6-9), cmake (= 3.13.4-1), cmake-data (= 3.13.4-1), coreutils (= 8.30-3), cpp (= 4:8.3.0-1), cpp-8 (= 8.3.0-7), dash (= 0.5.10.2-5), debconf (= 1.5.72), debhelper (= 12.1.1), debianutils (= 4.8.6.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.1.2-1), diffutils (= 1:3.7-3), dpkg (= 1.19.6), dpkg-dev (= 1.19.6), dwz (= 0.12-3), fdisk (= 2.33.1-0.1), file (= 1:5.35-4), findutils (= 4.6.0+git+20190209-2), g++ (= 4:8.3.0-1), g++-8 (= 8.3.0-7), gcc (= 4:8.3.0-1), gcc-8 (= 8.3.0-7), gcc-8-base (= 8.3.0-7), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), grep (= 3.3-1), groff-base (= 1.22.4-3), gzip (= 1.9-3), hostname (= 3.21), icu-devtools (= 63.1-6), init-system-helpers (= 1.56+nmu1), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-4), libarchive-zip-perl (= 1.64-1), libarchive13 (= 3.3.3-4), libasan5 (= 8.3.0-7), libatomic1 (= 8.3.0-7), libattr1 (= 1:2.4.48-4), libaudit-common (= 1:2.8.4-3), libaudit1 (= 1:2.8.4-3), libbinutils (= 2.31.1-16), libblkid1 (= 2.33.1-0.1), libboost-iostreams-dev (= 1.67.0.1), libboost-iostreams1.67-dev (= 1.67.0-13), libboost-iostreams1.67.0 (= 1.67.0-13), libboost-regex1.67-dev (= 1.67.0-13), libboost-regex1.67.0 (= 1.67.0-13), libboost1.67-dev (= 1.67.0-13), libbpp-core-dev (= 2.4.1-3), libbpp-core4 (= 2.4.1-3), libbpp-phyl-dev (= 2.4.1-2), libbpp-phyl-omics-dev (= 2.4.1-1), libbpp-phyl-omics3 (= 2.4.1-1), libbpp-phyl12 (= 2.4.1-2), libbpp-seq-dev (= 2.4.1-3), libbpp-seq-omics-dev (= 2.4.1-3), libbpp-seq-omics3 (= 2.4.1-3), libbpp-seq12 (= 2.4.1-3), libbsd0 (= 0.9.1-2), libbz2-1.0 (= 1.0.6-9), libbz2-dev (= 1.0.6-9), libc-bin (= 2.28-10), libc-dev-bin (= 2.28-10), libc6 (= 2.28-10), libc6-dev (= 2.28-10), libcap-ng0 (= 0.7.9-2), libcc1-0 (= 8.3.0-7), libcom-err2 (= 1.45.1-1), libcroco3 (= 0.6.12-3), libcurl4 (= 7.64.0-3), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.249), libdpkg-perl (= 1.19.6), libelf1 (= 0.176-1), libexpat1 (= 2.2.6-1), libfdisk1 (= 2.33.1-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.1.2-1), libgcc-8-dev (= 8.3.0-7), libgcc1 (= 1:8.3.0-7), libgcrypt20 (= 1.8.4-5), libgdbm-compat4 (= 1.18.1-4), libgdbm6 (= 1.18.1-4), libglib2.0-0 (= 2.58.3-1), libgmp10 (= 2:6.1.2+dfsg-4), libgnutls30 (= 3.6.7-2), libgomp1 (= 8.3.0-7), libgpg-error0 (= 1.35-1), libgssapi-krb5-2 (= 1.17-2), libhogweed4 (= 3.4.1-1), libicu-dev (= 63.1-6), libicu63 (= 63.1-6), libidn2-0 (= 2.0.5-1), libisl19 (= 0.20-2), libitm1 (= 8.3.0-7), libjsoncpp1 (= 1.7.4-3), libk5crypto3 (= 1.17-2), libkeyutils1 (= 1.6-6), libkrb5-3 (= 1.17-2), libkrb5support0 (= 1.17-2), libldap-2.4-2 (= 2.4.47+dfsg-3), libldap-common (= 2.4.47+dfsg-3), liblsan0 (= 8.3.0-7), liblz4-1 (= 1.8.3-1), liblzma5 (= 5.2.4-1), libmagic-mgc (= 1:5.35-4), libmagic1 (= 1:5.35-4), libmount1 (= 2.33.1-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-7), libncurses6 (= 6.1+20181013-2), libncursesw6 (= 6.1+20181013-2), libnettle6 (= 3.4.1-1), libnghttp2-14 (= 1.37.0-1), libp11-kit0 (= 0.23.15-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre3 (= 2:8.39-12), libperl5.28 (= 5.28.1-6), libpipeline1 (= 1.5.1-2), libprocps7 (= 2:3.3.15-2), libpsl5 (= 0.20.2-2), libquadmath0 (= 8.3.0-7), librhash0 (= 1.3.8-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2), libsasl2-2 (= 2.1.27+dfsg-1), libsasl2-modules-db (= 2.1.27+dfsg-1), libseccomp2 (= 2.3.3-4), libselinux1 (= 2.8-1+b1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.33.1-0.1), libssh2-1 (= 1.8.0-2.1), libssl1.1 (= 1.1.1b-2), libstdc++-8-dev (= 8.3.0-7), libstdc++6 (= 8.3.0-7), libsystemd0 (= 241-4), libtasn1-6 (= 4.13-3), libtext-unidecode-perl (= 1.30-1), libtinfo6 (= 6.1+20181013-2), libtool (= 2.4.6-10), libtsan0 (= 8.3.0-7), libubsan1 (= 8.3.0-7), libuchardet0 (= 0.0.6-3), libudev1 (= 241-4), libunistring2 (= 0.9.10-1), libuuid1 (= 2.33.1-0.1), libuv1 (= 1.24.1-1), libxml-libxml-perl (= 2.0134+dfsg-1), libxml-namespacesupport-perl (= 1.12-1), libxml-sax-base-perl (= 1.09-1), libxml-sax-perl (= 1.00+dfsg-1), libxml2 (= 2.9.4+dfsg1-7+b3), libzstd1 (= 1.3.8+dfsg-3), linux-libc-dev (= 4.19.37-3), login (= 1:4.5-1.1), lsb-base (= 10.2019051400), m4 (= 1.4.18-2), make (= 4.2.1-1.2), man-db (= 2.8.5-2), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20181013-2), ncurses-bin (= 6.1+20181013-2), patch (= 2.7.6-3), perl (= 5.28.1-6), perl-base (= 5.28.1-6), perl-modules-5.28 (= 5.28.1-6), po-debconf (= 1.0.21), procps (= 2:3.3.15-2), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.93-8), tar (= 1.30+dfsg-6), tex-common (= 6.11), texinfo (= 6.5.0.dfsg.1-5), ucf (= 3.0038+nmu1), util-linux (= 2.33.1-0.1), xz-utils (= 5.2.4-1), zlib1g (= 1:1.2.11.dfsg-1), zlib1g-dev (= 1:1.2.11.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="POSIX" SOURCE_DATE_EPOCH="1534930787" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ maffilter-dbgsym_1.3.1+dfsg-1_mips64el.deb ------------------------------------------ new Debian package, version 2.0. size 3652876 bytes: control archive=540 bytes. 392 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: maffilter-dbgsym Source: maffilter Version: 1.3.1+dfsg-1 Auto-Built-Package: debug-symbols Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 4846 Depends: maffilter (= 1.3.1+dfsg-1) Section: debug Priority: optional Description: debug symbols for maffilter Build-Ids: 84ef87b3578fa615dc01916258fdbde8278b6f95 drwxr-xr-x root/root 0 2018-08-22 09:39 ./ drwxr-xr-x root/root 0 2018-08-22 09:39 ./usr/ drwxr-xr-x root/root 0 2018-08-22 09:39 ./usr/lib/ drwxr-xr-x root/root 0 2018-08-22 09:39 ./usr/lib/debug/ drwxr-xr-x root/root 0 2018-08-22 09:39 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2018-08-22 09:39 ./usr/lib/debug/.build-id/84/ -rw-r--r-- root/root 4951832 2018-08-22 09:39 ./usr/lib/debug/.build-id/84/ef87b3578fa615dc01916258fdbde8278b6f95.debug drwxr-xr-x root/root 0 2018-08-22 09:39 ./usr/share/ drwxr-xr-x root/root 0 2018-08-22 09:39 ./usr/share/doc/ lrwxrwxrwx root/root 0 2018-08-22 09:39 ./usr/share/doc/maffilter-dbgsym -> maffilter maffilter_1.3.1+dfsg-1_mips64el.deb ----------------------------------- new Debian package, version 2.0. size 183340 bytes: control archive=1224 bytes. 1358 bytes, 25 lines control 470 bytes, 7 lines md5sums Package: maffilter Version: 1.3.1+dfsg-1 Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 964 Depends: libboost-iostreams1.67.0, libboost-regex1.67.0 (>= 1.67.0-10), libbpp-core4, libbpp-phyl-omics3 (>= 2.4.1), libbpp-phyl12, libbpp-seq-omics3, libbpp-seq12, libbz2-1.0, libc6 (>= 2.2), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4) Suggests: maffilter-examples Section: science Priority: optional Homepage: https://jydu.github.io/maffilter/ Description: process genome alignment in the Multiple Alignment Format MafFilter applies a series of "filters" to a MAF file, in order to clean it, extract data and computer statistics while keeping track of the associated meta-data such as genome coordinates and quality scores. . * It can process the alignment to remove low-quality / ambiguous / masked regions. * It can export data into a single or multiple alignment file in format such as Fasta or Clustal. * It can read annotation data in GFF or GTF format, and extract the corresponding alignment. * It can perform sliding windows calculations. * It can reconstruct phylogeny/genealogy along the genome alignment. * It can compute population genetics statistics, such as site frequency spectrum, number of fixed/polymorphic sites, etc. drwxr-xr-x root/root 0 2018-08-22 09:39 ./ drwxr-xr-x root/root 0 2018-08-22 09:39 ./usr/ drwxr-xr-x root/root 0 2018-08-22 09:39 ./usr/bin/ -rwxr-xr-x root/root 950768 2018-08-22 09:39 ./usr/bin/maffilter drwxr-xr-x root/root 0 2018-08-22 09:39 ./usr/share/ drwxr-xr-x root/root 0 2018-08-22 09:39 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-08-22 09:39 ./usr/share/doc/maffilter/ -rw-r--r-- root/root 161 2018-08-17 13:32 ./usr/share/doc/maffilter/AUTHORS -rw-r--r-- root/root 549 2018-08-22 09:39 ./usr/share/doc/maffilter/changelog.Debian.gz -rw-r--r-- root/root 820 2018-08-17 13:32 ./usr/share/doc/maffilter/changelog.gz -rw-r--r-- root/root 2686 2018-08-22 09:39 ./usr/share/doc/maffilter/copyright drwxr-xr-x root/root 0 2018-08-22 09:39 ./usr/share/info/ -rw-r--r-- root/root 18108 2018-08-22 09:39 ./usr/share/info/maffilter.info.gz drwxr-xr-x root/root 0 2018-08-22 09:39 ./usr/share/man/ drwxr-xr-x root/root 0 2018-08-22 09:39 ./usr/share/man/man1/ -rw-r--r-- root/root 345 2018-08-22 09:39 ./usr/share/man/man1/maffilter.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 176564 Build-Time: 85 Distribution: unstable Foreign Architectures: mips64el Host Architecture: mips64el Install-Time: 36 Job: maffilter_1.3.1+dfsg-1 Lintian: pass Machine Architecture: amd64 Package: maffilter Package-Time: 140 Source-Version: 1.3.1+dfsg-1 Space: 176564 Status: successful Version: 1.3.1+dfsg-1 -------------------------------------------------------------------------------- Finished at 2019-05-18T13:30:20Z Build needed 00:02:20, 176564k disk space