sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | mafft 7.505-1 (s390x) Thu, 30 Jun 2022 02:04:52 +0000 | +==============================================================================+ Package: mafft Version: 7.505-1 Source Version: 7.505-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: s390x Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-d33fb042-7120-4987-979e-afa2ecd5901a' with '<>' I: NOTICE: Log filtering will replace 'build/mafft-O0gDks/resolver-kb4QAF' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [165 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2022-06-29-2017.14-F-2022-06-29-0816.17.pdiff [81.3 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2022-06-29-2017.14-F-2022-06-29-0816.17.pdiff [81.3 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2022-06-29-2017.14-F-2022-06-29-0816.17.pdiff [51.5 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2022-06-29-2017.14-F-2022-06-29-0816.17.pdiff [51.5 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main s390x Packages [8803 kB] Fetched 9229 kB in 4s (2353 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'mafft' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/mafft.git Please use: git clone https://salsa.debian.org/med-team/mafft.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 631 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main mafft 7.505-1 (dsc) [1969 B] Get:2 http://debian.oregonstate.edu/debian unstable/main mafft 7.505-1 (tar) [621 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main mafft 7.505-1 (diff) [7164 B] Fetched 631 kB in 0s (7324 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/mafft-O0gDks/mafft-7.505' with '<>' I: NOTICE: Log filtering will replace 'build/mafft-O0gDks' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x Filtered Build-Depends: debhelper-compat (= 13), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [405 B] Get:5 copy:/<>/apt_archive ./ Packages [492 B] Fetched 1854 B in 0s (73.4 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-s390x-linux-gnu bsdextrautils build-essential cpp-11-s390x-linux-gnu cpp-s390x-linux-gnu cross-config crossbuild-essential-s390x debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-11 g++-11-s390x-linux-gnu g++-s390x-linux-gnu gcc-11-cross-base gcc-11-s390x-linux-gnu gcc-11-s390x-linux-gnu-base gcc-12-base:s390x gcc-12-cross-base gcc-9-base:s390x gcc-s390x-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:s390x libasan6-s390x-cross libatomic1:s390x libatomic1-s390x-cross libc6:s390x libc6-dev libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libcom-err2:s390x libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:s390x libcrypt1:s390x libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev-s390x-cross libgcc-9-dev:s390x libgcc-s1:s390x libgcc-s1-s390x-cross libgomp1:s390x libgomp1-s390x-cross libgssapi-krb5-2 libgssapi-krb5-2:s390x libicu71 libio-string-perl libitm1:s390x libitm1-s390x-cross libk5crypto3 libk5crypto3:s390x libkeyutils1 libkeyutils1:s390x libkrb5-3 libkrb5-3:s390x libkrb5support0 libkrb5support0:s390x liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev libnsl-dev:s390x libnsl2 libnsl2:s390x libperl5.34 libpipeline1 libsigsegv2 libssl3 libssl3:s390x libstdc++-11-dev libstdc++-11-dev-s390x-cross libstdc++-9-dev:s390x libstdc++6:s390x libstdc++6-s390x-cross libsub-override-perl libtirpc-common libtirpc-dev libtirpc-dev:s390x libtirpc3 libtirpc3:s390x libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:s390x linux-libc-dev-s390x-cross m4 man-db perl perl-modules-5.34 po-debconf rpcsvc-proto sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-11-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-11-multilib gcc-11-doc g++-11-multilib-s390x-linux-gnu gcc-11-multilib-s390x-linux-gnu manpages-dev flex bison gdb-s390x-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:s390x libc-l10n:s390x locales:s390x libnss-nis:s390x libnss-nisplus:s390x glibc-doc manpages-dev:s390x gnupg git bzr krb5-doc krb5-user krb5-doc:s390x krb5-user:s390x libstdc++-11-doc libstdc++-9-doc:s390x libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx libidn2-0:s390x libfile-fcntllock-perl libarchive-cpio-perl krb5-locales krb5-locales:s390x libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-s390x-linux-gnu bsdextrautils build-essential cpp-11-s390x-linux-gnu cpp-s390x-linux-gnu cross-config crossbuild-essential-s390x debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-11 g++-11-s390x-linux-gnu g++-s390x-linux-gnu gcc-11-cross-base gcc-11-s390x-linux-gnu gcc-11-s390x-linux-gnu-base gcc-12-base:s390x gcc-12-cross-base gcc-9-base:s390x gcc-s390x-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:s390x libasan6-s390x-cross libatomic1:s390x libatomic1-s390x-cross libc6:s390x libc6-dev libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libcom-err2:s390x libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:s390x libcrypt1:s390x libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev-s390x-cross libgcc-9-dev:s390x libgcc-s1:s390x libgcc-s1-s390x-cross libgomp1:s390x libgomp1-s390x-cross libgssapi-krb5-2 libgssapi-krb5-2:s390x libicu71 libio-string-perl libitm1:s390x libitm1-s390x-cross libk5crypto3 libk5crypto3:s390x libkeyutils1 libkeyutils1:s390x libkrb5-3 libkrb5-3:s390x libkrb5support0 libkrb5support0:s390x liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev libnsl-dev:s390x libnsl2 libnsl2:s390x libperl5.34 libpipeline1 libsigsegv2 libssl3 libssl3:s390x libstdc++-11-dev libstdc++-11-dev-s390x-cross libstdc++-9-dev:s390x libstdc++6:s390x libstdc++6-s390x-cross libsub-override-perl libtirpc-common libtirpc-dev libtirpc-dev:s390x libtirpc3 libtirpc3:s390x libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:s390x linux-libc-dev-s390x-cross m4 man-db perl perl-modules-5.34 po-debconf rpcsvc-proto sbuild-build-depends-main-dummy:s390x sensible-utils ucf 0 upgraded, 121 newly installed, 0 to remove and 0 not upgraded. Need to get 108 MB of archives. After this operation, 435 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [916 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.34 all 5.34.0-4 [2850 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.34 amd64 5.34.0-4 [4200 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.34.0-4 [297 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4+b2 [19.2 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main s390x gcc-9-base s390x 9.5.0-1 [200 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.41-4 [295 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.41-4 [129 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.41-4 [67.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.21-6 [175 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-8 [936 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.38-4 [144 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.6-1 [38.6 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.10.2-1 [1411 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.14-1 [37.2 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-5 [204 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.71-2 [343 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.21-6 [510 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-s390x-linux-gnu amd64 2.38.50.20220627-1 [2386 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.27-1.1 [118 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5support0 amd64 1.19.2-2+b2 [65.9 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libk5crypto3 amd64 1.19.2-2+b2 [114 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-1 [15.7 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libssl3 amd64 3.0.4-2 [2034 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5-3 amd64 1.19.2-2+b2 [363 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.19.2-2+b2 [166 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-common all 1.3.2-2 [13.8 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc3 amd64 1.3.2-2 [83.9 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl2 amd64 1.3.0-2 [39.5 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.3.2-2 [190 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 rpcsvc-proto amd64 1.4.2-4 [63.1 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.33-7 [2289 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-11-dev amd64 11.3.0-3 [1965 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 g++-11 amd64 11.3.0-3 [10.2 MB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:11.2.0-2 [1636 B] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.21.8 [1615 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.21.8 [2357 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.9 [7704 B] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-s390x-linux-gnu-base amd64 11.3.0-3cross1 [209 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-11-s390x-linux-gnu amd64 11.3.0-3cross1 [7199 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-s390x-linux-gnu amd64 4:11.2.0-2 [17.0 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.18+nmu2 [31.7 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-cross-base all 11.3.0-3cross1 [204 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-12-cross-base all 12.1.0-2cross1 [202 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-s390x-cross all 2.33-1cross1 [1241 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-s390x-cross all 12.1.0-2cross1 [25.1 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-s390x-cross all 12.1.0-2cross1 [103 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-s390x-cross all 12.1.0-2cross1 [24.8 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-s390x-cross all 12.1.0-2cross1 [7816 B] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-s390x-cross all 11.3.0-3cross1 [1920 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-s390x-cross all 12.1.0-2cross1 [569 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-s390x-cross all 12.1.0-2cross1 [850 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-11-dev-s390x-cross all 11.3.0-3cross1 [690 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-s390x-linux-gnu amd64 11.3.0-3cross1 [14.0 MB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-s390x-linux-gnu amd64 4:11.2.0-2 [1452 B] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-s390x-cross all 5.15.5-1cross1 [1573 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-s390x-cross all 2.33-1cross1 [1856 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-11-dev-s390x-cross all 11.3.0-3cross1 [1929 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 g++-11-s390x-linux-gnu amd64 11.3.0-3cross1 [8044 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 g++-s390x-linux-gnu amd64 4:11.2.0-2 [1176 B] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libicu71 amd64 71.1-3 [9218 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.14+dfsg-1 [708 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-2 [21.0 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1 [337 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.27-1 [17.3 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu2 [30.6 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.18+nmu2 [40.9 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-s390x all 12.9 [6704 B] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.7.1 [195 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.7-4 [526 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-3 [10.4 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.13.0-1 [15.8 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.187-1 [179 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.21-6 [1310 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.7.1 [1071 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main s390x gcc-12-base s390x 12.1.0-4 [207 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main s390x libgcc-s1 s390x 12.1.0-4 [25.1 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main s390x libc6 s390x 2.33-7 [2465 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main s390x libasan5 s390x 9.5.0-1 [2549 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main s390x libatomic1 s390x 12.1.0-4 [8072 B] Get:101 http://debian.oregonstate.edu/debian unstable/main s390x linux-libc-dev s390x 5.18.5-1 [1593 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main s390x libcrypt1 s390x 1:4.4.27-1.1 [89.8 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main s390x libcrypt-dev s390x 1:4.4.27-1.1 [118 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main s390x libcom-err2 s390x 1.46.5-2 [75.5 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main s390x libkrb5support0 s390x 1.19.2-2+b2 [65.0 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main s390x libk5crypto3 s390x 1.19.2-2+b2 [112 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main s390x libkeyutils1 s390x 1.6.3-1 [15.4 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main s390x libssl3 s390x 3.0.4-2 [1637 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main s390x libkrb5-3 s390x 1.19.2-2+b2 [342 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main s390x libgssapi-krb5-2 s390x 1.19.2-2+b2 [154 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main s390x libtirpc3 s390x 1.3.2-2 [78.0 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main s390x libnsl2 s390x 1.3.0-2 [37.3 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main s390x libtirpc-dev s390x 1.3.2-2 [185 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main s390x libnsl-dev s390x 1.3.0-2 [64.6 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main s390x libc6-dev s390x 2.33-7 [1882 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main s390x libgomp1 s390x 12.1.0-4 [105 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main s390x libitm1 s390x 12.1.0-4 [25.3 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main s390x libstdc++6 s390x 12.1.0-4 [614 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main s390x libubsan1 s390x 12.1.0-4 [851 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main s390x libgcc-9-dev s390x 9.5.0-1 [679 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main s390x libstdc++-9-dev s390x 9.5.0-1 [1684 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 108 MB in 1s (119 MB/s) Selecting previously unselected package perl-modules-5.34. (Reading database ... 10525 files and directories currently installed.) Preparing to unpack .../000-perl-modules-5.34_5.34.0-4_all.deb ... Unpacking perl-modules-5.34 (5.34.0-4) ... Selecting previously unselected package libperl5.34:amd64. Preparing to unpack .../001-libperl5.34_5.34.0-4_amd64.deb ... Unpacking libperl5.34:amd64 (5.34.0-4) ... Selecting previously unselected package perl. Preparing to unpack .../002-perl_5.34.0-4_amd64.deb ... Unpacking perl (5.34.0-4) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../003-liblocale-gettext-perl_1.07-4+b2_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b2) ... Selecting previously unselected package gcc-9-base:s390x. Preparing to unpack .../004-gcc-9-base_9.5.0-1_s390x.deb ... Unpacking gcc-9-base:s390x (9.5.0-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../005-sensible-utils_0.0.17_all.deb ... Unpacking sensible-utils (0.0.17) ... 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Preparing to unpack .../098-libatomic1_12.1.0-4_s390x.deb ... Unpacking libatomic1:s390x (12.1.0-4) ... Selecting previously unselected package linux-libc-dev:s390x. Preparing to unpack .../099-linux-libc-dev_5.18.5-1_s390x.deb ... Unpacking linux-libc-dev:s390x (5.18.5-1) ... Selecting previously unselected package libcrypt1:s390x. Preparing to unpack .../100-libcrypt1_1%3a4.4.27-1.1_s390x.deb ... Unpacking libcrypt1:s390x (1:4.4.27-1.1) ... Selecting previously unselected package libcrypt-dev:s390x. Preparing to unpack .../101-libcrypt-dev_1%3a4.4.27-1.1_s390x.deb ... Unpacking libcrypt-dev:s390x (1:4.4.27-1.1) ... Selecting previously unselected package libcom-err2:s390x. Preparing to unpack .../102-libcom-err2_1.46.5-2_s390x.deb ... Unpacking libcom-err2:s390x (1.46.5-2) ... Selecting previously unselected package libkrb5support0:s390x. Preparing to unpack .../103-libkrb5support0_1.19.2-2+b2_s390x.deb ... Unpacking libkrb5support0:s390x (1.19.2-2+b2) ... Selecting previously unselected package libk5crypto3:s390x. Preparing to unpack .../104-libk5crypto3_1.19.2-2+b2_s390x.deb ... Unpacking libk5crypto3:s390x (1.19.2-2+b2) ... Selecting previously unselected package libkeyutils1:s390x. Preparing to unpack .../105-libkeyutils1_1.6.3-1_s390x.deb ... Unpacking libkeyutils1:s390x (1.6.3-1) ... Selecting previously unselected package libssl3:s390x. Preparing to unpack .../106-libssl3_3.0.4-2_s390x.deb ... Unpacking libssl3:s390x (3.0.4-2) ... Selecting previously unselected package libkrb5-3:s390x. Preparing to unpack .../107-libkrb5-3_1.19.2-2+b2_s390x.deb ... Unpacking libkrb5-3:s390x (1.19.2-2+b2) ... Selecting previously unselected package libgssapi-krb5-2:s390x. Preparing to unpack .../108-libgssapi-krb5-2_1.19.2-2+b2_s390x.deb ... Unpacking libgssapi-krb5-2:s390x (1.19.2-2+b2) ... Selecting previously unselected package libtirpc3:s390x. Preparing to unpack .../109-libtirpc3_1.3.2-2_s390x.deb ... Unpacking libtirpc3:s390x (1.3.2-2) ... Selecting previously unselected package libnsl2:s390x. Preparing to unpack .../110-libnsl2_1.3.0-2_s390x.deb ... Unpacking libnsl2:s390x (1.3.0-2) ... Selecting previously unselected package libtirpc-dev:s390x. Preparing to unpack .../111-libtirpc-dev_1.3.2-2_s390x.deb ... Unpacking libtirpc-dev:s390x (1.3.2-2) ... Selecting previously unselected package libnsl-dev:s390x. Preparing to unpack .../112-libnsl-dev_1.3.0-2_s390x.deb ... Unpacking libnsl-dev:s390x (1.3.0-2) ... Selecting previously unselected package libc6-dev:s390x. Preparing to unpack .../113-libc6-dev_2.33-7_s390x.deb ... Unpacking libc6-dev:s390x (2.33-7) ... Selecting previously unselected package libgomp1:s390x. Preparing to unpack .../114-libgomp1_12.1.0-4_s390x.deb ... Unpacking libgomp1:s390x (12.1.0-4) ... Selecting previously unselected package libitm1:s390x. Preparing to unpack .../115-libitm1_12.1.0-4_s390x.deb ... Unpacking libitm1:s390x (12.1.0-4) ... Selecting previously unselected package libstdc++6:s390x. Preparing to unpack .../116-libstdc++6_12.1.0-4_s390x.deb ... Unpacking libstdc++6:s390x (12.1.0-4) ... Selecting previously unselected package libubsan1:s390x. Preparing to unpack .../117-libubsan1_12.1.0-4_s390x.deb ... Unpacking libubsan1:s390x (12.1.0-4) ... Selecting previously unselected package libgcc-9-dev:s390x. Preparing to unpack .../118-libgcc-9-dev_9.5.0-1_s390x.deb ... Unpacking libgcc-9-dev:s390x (9.5.0-1) ... Selecting previously unselected package libstdc++-9-dev:s390x. Preparing to unpack .../119-libstdc++-9-dev_9.5.0-1_s390x.deb ... Unpacking libstdc++-9-dev:s390x (9.5.0-1) ... Selecting previously unselected package sbuild-build-depends-main-dummy:s390x. Preparing to unpack .../120-sbuild-build-depends-main-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-main-dummy:s390x (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libpipeline1:amd64 (1.5.6-1) ... Setting up libicu71:amd64 (71.1-3) ... Setting up libkeyutils1:amd64 (1.6.3-1) ... Setting up binutils-s390x-linux-gnu (2.38.50.20220627-1) ... Setting up gcc-12-cross-base (12.1.0-2cross1) ... Setting up bsdextrautils (2.38-4) ... Setting up libmagic-mgc (1:5.41-4) ... Setting up libtirpc-common (1.3.2-2) ... Setting up libc6-s390x-cross (2.33-1cross1) ... Setting up libatomic1-s390x-cross (12.1.0-2cross1) ... Setting up libssl3:amd64 (3.0.4-2) ... Setting up libmagic1:amd64 (1:5.41-4) ... Setting up linux-libc-dev:s390x (5.18.5-1) ... Setting up gettext-base (0.21-6) ... Setting up file (1:5.41-4) ... Setting up perl-modules-5.34 (5.34.0-4) ... Setting up libkrb5support0:amd64 (1.19.2-2+b2) ... Setting up gcc-12-base:s390x (12.1.0-4) ... Setting up autotools-dev (20220109.1) ... Setting up linux-libc-dev-s390x-cross (5.15.5-1cross1) ... Setting up cross-config (2.6.18+nmu2) ... Setting up rpcsvc-proto (1.4.2-4) ... Setting up libsigsegv2:amd64 (2.14-1) ... Setting up autopoint (0.21-6) ... Setting up libgcc-s1-s390x-cross (12.1.0-2cross1) ... Setting up libk5crypto3:amd64 (1.19.2-2+b2) ... Setting up libitm1-s390x-cross (12.1.0-2cross1) ... Setting up gcc-11-cross-base (11.3.0-3cross1) ... Setting up sensible-utils (0.0.17) ... Setting up libc6-dev-s390x-cross (2.33-1cross1) ... Setting up libcrypt-dev:amd64 (1:4.4.27-1.1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libkrb5-3:amd64 (1.19.2-2+b2) ... Setting up libelf1:amd64 (0.187-1) ... Setting up libgomp1-s390x-cross (12.1.0-2cross1) ... Setting up libxml2:amd64 (2.9.14+dfsg-1) ... Setting up liblocale-gettext-perl (1.07-4+b2) ... Setting up gcc-9-base:s390x (9.5.0-1) ... Setting up gcc-11-s390x-linux-gnu-base:amd64 (11.3.0-3cross1) ... Setting up libperl5.34:amd64 (5.34.0-4) ... Setting up gettext (0.21-6) ... Setting up libstdc++6-s390x-cross (12.1.0-2cross1) ... Setting up m4 (1.4.18-5) ... Setting up libasan6-s390x-cross (11.3.0-3cross1) ... Setting up perl (5.34.0-4) ... Setting up libgssapi-krb5-2:amd64 (1.19.2-2+b2) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.21.8) ... Setting up autoconf (2.71-2) ... Setting up dwz (0.14-1) ... Setting up groff-base (1.22.4-8) ... Setting up libsub-override-perl (0.09-3) ... Setting up cpp-11-s390x-linux-gnu (11.3.0-3cross1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libtirpc3:amd64 (1.3.2-2) ... Setting up libfile-which-perl (1.27-1) ... Setting up libubsan1-s390x-cross (12.1.0-2cross1) ... Setting up cpp-s390x-linux-gnu (4:11.2.0-2) ... Setting up libgcc-11-dev-s390x-cross (11.3.0-3cross1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.7.1) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up man-db (2.10.2-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.21.8) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxml-sax-base-perl (1.09-2) ... Setting up libio-string-perl (1.08-3.1) ... Setting up libtirpc-dev:amd64 (1.3.2-2) ... Setting up gcc-11-s390x-linux-gnu (11.3.0-3cross1) ... Setting up gcc-s390x-linux-gnu (4:11.2.0-2) ... Setting up libstdc++-11-dev-s390x-cross (11.3.0-3cross1) ... Setting up libnsl2:amd64 (1.3.0-2) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up libfile-stripnondeterminism-perl (1.13.0-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-11-s390x-linux-gnu (11.3.0-3cross1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.13.0-1) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up libc6-dev:amd64 (2.33-7) ... Setting up libtool (2.4.7-4) ... Setting up g++-s390x-linux-gnu (4:11.2.0-2) ... Setting up dh-autoreconf (20) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libstdc++-11-dev:amd64 (11.3.0-3) ... Setting up g++-11 (11.3.0-3) ... Setting up debhelper (13.7.1) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up g++ (4:11.2.0-2) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up build-essential (12.9) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu2) ... Setting up dpkg-cross (2.6.18+nmu2) ... Setting up crossbuild-essential-s390x (12.9) ... Setting up libgcc-s1:s390x (12.1.0-4) ... Setting up libc6:s390x (2.33-7) ... Setting up libstdc++6:s390x (12.1.0-4) ... Setting up libitm1:s390x (12.1.0-4) ... Setting up libkeyutils1:s390x (1.6.3-1) ... Setting up libssl3:s390x (3.0.4-2) ... Setting up libcrypt1:s390x (1:4.4.27-1.1) ... Setting up libcom-err2:s390x (1.46.5-2) ... Setting up libgomp1:s390x (12.1.0-4) ... Setting up libkrb5support0:s390x (1.19.2-2+b2) ... Setting up libasan5:s390x (9.5.0-1) ... Setting up libatomic1:s390x (12.1.0-4) ... Setting up libk5crypto3:s390x (1.19.2-2+b2) ... Setting up libubsan1:s390x (12.1.0-4) ... Setting up libcrypt-dev:s390x (1:4.4.27-1.1) ... Setting up libkrb5-3:s390x (1.19.2-2+b2) ... Setting up libgcc-9-dev:s390x (9.5.0-1) ... Setting up libgssapi-krb5-2:s390x (1.19.2-2+b2) ... Setting up libtirpc3:s390x (1.3.2-2) ... Setting up libtirpc-dev:s390x (1.3.2-2) ... Setting up libnsl2:s390x (1.3.0-2) ... Setting up libnsl-dev:s390x (1.3.0-2) ... Setting up libc6-dev:s390x (2.33-7) ... Setting up libstdc++-9-dev:s390x (9.5.0-1) ... Setting up sbuild-build-depends-main-dummy:s390x (0.invalid.0) ... Processing triggers for libc-bin (2.33-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (s390x included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-17-amd64 #1 SMP Debian 4.19.194-3 (2021-07-18) amd64 (x86_64) Toolchain package versions: binutils_2.38.50.20220627-1 dpkg-dev_1.21.8 g++-11_11.3.0-3 gcc-11_11.3.0-3 libc6-dev_2.33-7 libstdc++-11-dev_11.3.0-3 libstdc++-11-dev-s390x-cross_11.3.0-3cross1 libstdc++-9-dev_9.5.0-1 libstdc++6_12.1.0-4 libstdc++6-s390x-cross_12.1.0-2cross1 linux-libc-dev_5.18.5-1 Package versions: adduser_3.121 apt_2.5.0 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-6 autotools-dev_20220109.1 base-files_12.2 base-passwd_3.5.52 bash_5.1-6.1 binutils_2.38.50.20220627-1 binutils-common_2.38.50.20220627-1 binutils-s390x-linux-gnu_2.38.50.20220627-1 binutils-x86-64-linux-gnu_2.38.50.20220627-1 bsdextrautils_2.38-4 bsdutils_1:2.38-4 build-essential_12.9 bzip2_1.0.8-5 coreutils_8.32-4.1 cpp_4:11.2.0-2 cpp-11_11.3.0-3 cpp-11-s390x-linux-gnu_11.3.0-3cross1 cpp-8_8.4.0-7 cpp-s390x-linux-gnu_4:11.2.0-2 cross-config_2.6.18+nmu2 crossbuild-essential-s390x_12.9 dash_0.5.11+git20210903+057cd650a4ed-8 debconf_1.5.79 debhelper_13.7.1 debian-archive-keyring_2021.1.1 debianutils_5.7-0.2 dh-autoreconf_20 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.7-5 dpkg_1.21.8 dpkg-cross_2.6.18+nmu2 dpkg-dev_1.21.8 dwz_0.14-1 e2fsprogs_1.46.5-2 fakeroot_1.29-1 fdisk_2.38-4 file_1:5.41-4 findutils_4.9.0-3 g++_4:11.2.0-2 g++-11_11.3.0-3 g++-11-s390x-linux-gnu_11.3.0-3cross1 g++-s390x-linux-gnu_4:11.2.0-2 gcc_4:11.2.0-2 gcc-11_11.3.0-3 gcc-11-base_11.3.0-3 gcc-11-cross-base_11.3.0-3cross1 gcc-11-s390x-linux-gnu_11.3.0-3cross1 gcc-11-s390x-linux-gnu-base_11.3.0-3cross1 gcc-12-base_12.1.0-4 gcc-12-cross-base_12.1.0-2cross1 gcc-8-base_8.4.0-7 gcc-9-base_9.5.0-1 gcc-s390x-linux-gnu_4:11.2.0-2 gettext_0.21-6 gettext-base_0.21-6 gpgv_2.2.35-2 grep_3.7-1 groff-base_1.22.4-8 gzip_1.12-1 hostname_3.23 init-system-helpers_1.63 intltool-debian_0.35.0+20060710.5 libacl1_2.3.1-1 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.5.0 libarchive-zip-perl_1.68-1 libasan5_9.5.0-1 libasan6_11.3.0-3 libasan6-s390x-cross_11.3.0-3cross1 libatomic1_12.1.0-4 libatomic1-s390x-cross_12.1.0-2cross1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.7-1 libaudit1_1:3.0.7-1+b1 libbinutils_2.38.50.20220627-1 libblkid1_2.38-4 libbz2-1.0_1.0.8-5 libc-bin_2.33-7 libc-dev-bin_2.33-7 libc6_2.33-7 libc6-dev_2.33-7 libc6-dev-s390x-cross_2.33-1cross1 libc6-s390x-cross_2.33-1cross1 libcap-ng0_0.8.3-1 libcap2_1:2.44-1 libcc1-0_12.1.0-4 libcom-err2_1.46.5-2 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-1 libcrypt-dev_1:4.4.27-1.1 libcrypt1_1:4.4.27-1.1 libctf-nobfd0_2.38.50.20220627-1 libctf0_2.38.50.20220627-1 libdb5.3_5.3.28+dfsg1-0.9 libdebconfclient0_0.263 libdebhelper-perl_13.7.1 libdebian-dpkgcross-perl_2.6.18+nmu2 libdpkg-perl_1.21.8 libelf1_0.187-1 libext2fs2_1.46.5-2 libfakeroot_1.29-1 libfdisk1_2.38-4 libffi6_3.2.1-9 libffi8_3.4.2-4 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.13.0-1 libfile-which-perl_1.27-1 libgcc-11-dev_11.3.0-3 libgcc-11-dev-s390x-cross_11.3.0-3cross1 libgcc-9-dev_9.5.0-1 libgcc-s1_12.1.0-4 libgcc-s1-s390x-cross_12.1.0-2cross1 libgcrypt20_1.10.1-2 libgdbm-compat4_1.23-1 libgdbm6_1.23-1 libgmp10_2:6.2.1+dfsg1-1 libgnutls30_3.7.6-2 libgomp1_12.1.0-4 libgomp1-s390x-cross_12.1.0-2cross1 libgpg-error0_1.45-2 libgprofng0_2.38.50.20220627-1 libgssapi-krb5-2_1.19.2-2+b2 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.7.3-1 libicu71_71.1-3 libidn2-0_2.3.2-2 libio-string-perl_1.08-3.1 libisl19_0.20-2 libisl23_0.24-2 libitm1_12.1.0-4 libitm1-s390x-cross_12.1.0-2cross1 libk5crypto3_1.19.2-2+b2 libkeyutils1_1.6.3-1 libkrb5-3_1.19.2-2+b2 libkrb5support0_1.19.2-2+b2 liblocale-gettext-perl_1.07-4+b2 liblsan0_12.1.0-4 liblz4-1_1.9.3-2 liblzma5_5.2.5-2.1 libmagic-mgc_1:5.41-4 libmagic1_1:5.41-4 libmount1_2.38-4 libmpc3_1.2.1-2 libmpfr6_4.1.0-3 libmpx2_8.4.0-7 libncursesw6_6.3+20220423-2 libnettle6_3.5.1+really3.4.1-1 libnettle8_3.7.3-1 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.24.1-1 libpam-modules_1.4.0-13 libpam-modules-bin_1.4.0-13 libpam-runtime_1.4.0-13 libpam0g_1.4.0-13 libpcre2-8-0_10.40-1 libpcre3_2:8.39-14 libperl5.28_5.28.1-6 libperl5.34_5.34.0-4 libpipeline1_1.5.6-1 libquadmath0_12.1.0-4 libreadline8_8.1.2-1.2 libseccomp2_2.5.4-1 libselinux1_3.4-1 libsemanage-common_3.4-1 libsemanage1_3.1-2 libsemanage2_3.4-1 libsepol1_3.1-1 libsepol2_3.4-2 libsigsegv2_2.14-1 libsmartcols1_2.38-4 libss2_1.46.5-2 libssl3_3.0.4-2 libstdc++-11-dev_11.3.0-3 libstdc++-11-dev-s390x-cross_11.3.0-3cross1 libstdc++-9-dev_9.5.0-1 libstdc++6_12.1.0-4 libstdc++6-s390x-cross_12.1.0-2cross1 libsub-override-perl_0.09-3 libsystemd0_251.2-7 libtasn1-6_4.18.0-4 libtinfo6_6.3+20220423-2 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.7-4 libtsan0_11.3.0-3 libubsan1_12.1.0-4 libubsan1-s390x-cross_12.1.0-2cross1 libuchardet0_0.0.7-1 libudev1_251.2-7 libunistring2_1.0-1 libuuid1_2.38-4 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-2 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-1 libxml2_2.9.14+dfsg-1 libxxhash0_0.8.1-1 libyaml-perl_1.30-1 libzstd1_1.5.2+dfsg-1 linux-libc-dev_5.18.5-1 linux-libc-dev-s390x-cross_5.15.5-1cross1 login_1:4.11.1+dfsg1-2 logsave_1.46.5-2 lsb-base_11.2 m4_1.4.18-5 make_4.3-4.1 man-db_2.10.2-1 mawk_1.3.4.20200120-3.1 mount_2.38-4 ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 passwd_1:4.11.1+dfsg1-2 patch_2.7.6-7 perl_5.34.0-4 perl-base_5.34.0-4 perl-modules-5.28_5.28.1-6 perl-modules-5.34_5.34.0-4 po-debconf_1.0.21+nmu1 readline-common_8.1.2-1.2 rpcsvc-proto_1.4.2-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.03-1 tar_1.34+dfsg-1 tzdata_2022a-1 ucf_3.0043 util-linux_2.38-4 util-linux-extra_2.38-4 xz-utils_5.2.5-2.1 zlib1g_1:1.2.11.dfsg-4 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: mafft Binary: mafft Architecture: any Version: 7.505-1 Maintainer: Debian Med Packaging Team Uploaders: Charles Plessy , Andreas Tille Homepage: https://mafft.cbrc.jp/alignment/software/ Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/mafft Vcs-Git: https://salsa.debian.org/med-team/mafft.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13) Package-List: mafft deb science optional arch=any Checksums-Sha1: 37040f606e1d19bfb17ecff80d242b49dc8689a1 621456 mafft_7.505.orig.tar.gz e20b17242d68291288b11cf6a2f27b6f753e5783 7164 mafft_7.505-1.debian.tar.xz Checksums-Sha256: 9b9ee0dea1d493f0fad6f9c227bcc291ddedd045b5558b7fea30dc5932db33b8 621456 mafft_7.505.orig.tar.gz d0317b4d2b4cd3afd5a27657bec696ea2f7e0f1101c858b8c0006c3a1b7a8d54 7164 mafft_7.505-1.debian.tar.xz Files: 4ff0b3ec3401d0e1ffc307a046d8c470 621456 mafft_7.505.orig.tar.gz f6c2cf64d9c7735986ebfd4e33793f37 7164 mafft_7.505-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEPpmlJvXcwMu/HO6mALrnSzQzafEFAmK3X5gSHG5pbGVzaEBk ZWJpYW4ub3JnAAoJEAC650s0M2nxe9kQAIPC6SE5MXvtnPuuCpmnx/Aq9cMr/u6+ HKViOzbF4k15RuMd//fQTXzVCHn4scXr8zHWLMnNw4m4c3jGtr8QC5JtV29PuVjg 2SlC4PNv0SuKV8VQ1dj9DIL3GhnYIWWdILChe/6XeRDSZkVjWTos7TjvZypAGuOc zb3dPTvgLr166kMPtDTumtLLjhCGR4VlDLfnUuhV6BDJWGWd7Gi2mp7HA511H0/I g9DgHmHHJyLT01dfG68ybmkhqxJbKC5SUqx+IRZO50AIqBH0HWdR/Ptp5q4IYGKQ LsUyMTNXDigKaUva65ant1JYDSmxy1qfID1nM6QpLEH/ZLnmOpw/qtHwASc8T+X/ UMkSv2lh7NUVkoalN22ptui0QXfMVaE+XKeryRkqAMRqBxlbCcIh4Ajnte4aI/3h Aie0iZK2/BX39CA3dyPxE4/D6wqzDkcorasfPkZv2rqNa4dewMW2L5iCVhwXt6of CVjKOtICpy6F4/+Oql6wMUbW9PvtIOqRQsKE5gT6b1NFbiW6BdSGTT0AlAkAejVD u6d6ASlu9jZuDpEt8Fd9cy8em84uwAkhjk0mR2JkpsM0/CaoZ1xp0X6PdL0ThU0r s4V4jxNyXv/bn+SNKmc/A4BlbfHt1GHmrlNEHk3er2h1AC+8yR3w1XhEF9UyXc+O mA7gApqRY0Xj =C4X/ -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.V_ZrBAOC/trustedkeys.kbx': General error gpgv: Signature made Sat Jun 25 19:18:48 2022 UTC gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1 gpgv: issuer "nilesh@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify signature ./mafft_7.505-1.dsc dpkg-source: info: extracting mafft in /<> dpkg-source: info: unpacking mafft_7.505.orig.tar.gz dpkg-source: info: unpacking mafft_7.505-1.debian.tar.xz Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.s390x DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-d33fb042-7120-4987-979e-afa2ecd5901a SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -as390x -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package mafft dpkg-buildpackage: info: source version 7.505-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-architecture: warning: specified GNU system type s390x-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture s390x debian/rules clean dh clean --sourcedirectory=core dh_auto_clean -O--sourcedirectory=core cd core && make -j1 clean make[1]: Entering directory '/<>/core' rm -f *.o *.a *.exe *~ mafftash_premafft.pl seekquencer_premafft.pl dvtditr dndfast7 dndblast sextet5 mafft-distance pairlocalalign multi2hat3s pairash addsingle maffttext2hex hex2maffttext splittbfast disttbfast tbfast nodepair mafft-profile f2cl mccaskillwrap contrafoldwrap countlen seq2regtable regtable2seq score getlag dndpre setcore filter replaceu restoreu setdirection makedirectionlist version mafft mafft-homologs.rb mafft-sparsecore.rb libdisttbfast.so libdisttbfast.dylib libdisttbfast.dll *.gcda *.gcno make[1]: Leaving directory '/<>/core' dh_autoreconf_clean -O--sourcedirectory=core debian/rules override_dh_clean make[1]: Entering directory '/<>' rm -rf binaries/* scripts/* dh_clean make[1]: Leaving directory '/<>' debian/rules binary-arch dh binary-arch --sourcedirectory=core dh_update_autotools_config -a -O--sourcedirectory=core dh_autoreconf -a -O--sourcedirectory=core dh_auto_configure -a -O--sourcedirectory=core debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build -- \ PREFIX=/usr/lib/mafft \ ENABLE_MULTITHREAD=-Denablemultithread \ LIBDIR=/usr/lib/mafft/lib/mafft \ CFLAGS="-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" \ LDFLAGS="-Wl,-z,relro -Wl,-z,now" cd core && make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=s390x-linux-gnu-pkg-config CXX=s390x-linux-gnu-g\+\+ CC=s390x-linux-gnu-gcc PREFIX=/usr/lib/mafft ENABLE_MULTITHREAD=-Denablemultithread LIBDIR=/usr/lib/mafft/lib/mafft "CFLAGS=-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "LDFLAGS=-Wl,-z,relro -Wl,-z,now" make[2]: Entering directory '/<>/core' cp mafftash_premafft.tmpl mafftash_premafft.pl cp seekquencer_premafft.tmpl seekquencer_premafft.pl s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mtxutl.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c io.c io.c: In function ‘PreRead’: io.c:1120:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1120 | fgets( b, B-1, fp ); *locnjob = atoi( b ); | ^~~~~~~~~~~~~~~~~~~ io.c:1125:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1125 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c:1129:25: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1129 | fgets( b, B-1, fp ); nleni = atoi( b ); | ^~~~~~~~~~~~~~~~~~~ io.c: In function ‘FRead’: io.c:1165:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1165 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c:1255:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1255 | fgets( b, B-1, fp ); nlen[i] = atoi( b ); /* seq i no nagasa */ | ^~~~~~~~~~~~~~~~~~~ io.c: In function ‘readhat2_doublehalf_part_pointer’: io.c:2707:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2707 | fgets( b, B, fp ); | ^~~~~~~~~~~~~~~~~ io.c:2709:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2709 | fgets( b, B, fp ); nseq0 = atoi( b ); // 2020/Oct/23 | ^~~~~~~~~~~~~~~~~ io.c:2715:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2715 | fgets( b, B, fp ); | ^~~~~~~~~~~~~~~~~ io.c: In function ‘readhat2_doublehalf_pointer’: io.c:2745:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2745 | fgets( b, B, fp ); | ^~~~~~~~~~~~~~~~~ io.c:2746:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2746 | fgets( b, B, fp ); b[5] = 0; nseq0 = atoi( b ); if( nseq != nseq0 ) | ^~~~~~~~~~~~~~~~~ io.c:2751:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2751 | fgets( b, B, fp ); | ^~~~~~~~~~~~~~~~~ io.c: In function ‘readhat2_doublehalf’: io.c:2779:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2779 | fgets( b, B, fp ); | ^~~~~~~~~~~~~~~~~ io.c:2780:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2780 | fgets( b, B, fp ); b[5] = 0; nseq0 = atoi( b ); if( nseq != nseq0 ) ErrorExit( "hat2 is wrong." ); | ^~~~~~~~~~~~~~~~~ io.c:2781:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2781 | fgets( b, B, fp ); | ^~~~~~~~~~~~~~~~~ io.c: In function ‘readhat2_double’: io.c:2809:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2809 | fgets( b, B, fp ); | ^~~~~~~~~~~~~~~~~ io.c:2810:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2810 | fgets( b, B, fp ); b[5] = 0; nseq0 = atoi( b ); if( nseq != nseq0 ) ErrorExit( "hat2 is wrong." ); | ^~~~~~~~~~~~~~~~~ io.c:2811:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2811 | fgets( b, B, fp ); | ^~~~~~~~~~~~~~~~~ io.c: In function ‘readhat2_int’: io.c:2839:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2839 | fgets( b, B, fp ); | ^~~~~~~~~~~~~~~~~ io.c:2840:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2840 | fgets( b, B, fp ); b[5] = 0; nseq0 = atoi( b ); if( nseq != nseq0 ) ErrorExit( "hat2 is wrong." ); | ^~~~~~~~~~~~~~~~~ io.c:2841:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2841 | fgets( b, B, fp ); | ^~~~~~~~~~~~~~~~~ io.c: In function ‘readhat2_pointer’: io.c:2870:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2870 | fgets( b, B, fp ); | ^~~~~~~~~~~~~~~~~ io.c:2871:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2871 | fgets( b, B, fp ); b[5] = 0; nseq0 = atoi( b ); if( nseq != nseq0 ) ErrorExit( "hat2 is wrong." ); | ^~~~~~~~~~~~~~~~~ io.c:2872:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2872 | fgets( b, B, fp ); | ^~~~~~~~~~~~~~~~~ io.c: In function ‘readhat2’: io.c:2900:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2900 | fgets( b, B, fp ); | ^~~~~~~~~~~~~~~~~ io.c:2901:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2901 | fgets( b, B, fp ); b[5] = 0; nseq0 = atoi( b ); if( nseq != nseq0 ) ErrorExit( "hat2 is wrong." ); | ^~~~~~~~~~~~~~~~~ io.c:2902:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2902 | fgets( b, B, fp ); | ^~~~~~~~~~~~~~~~~ io.c: In function ‘ReadFasta_sub’: io.c:3102:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3102 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c:3117:13: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3117 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c: In function ‘ReadSsearch’: io.c:3136:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3136 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c: In function ‘ReadBlastm7_avscore’: io.c:3264:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3264 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c:3271:25: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3271 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c:3272:25: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3272 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c: In function ‘ReadBlastm7_scoreonly’: io.c:3387:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3387 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c:3394:25: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3394 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c:3395:25: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3395 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c: In function ‘ReadBlastm7’: io.c:3505:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3505 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c:3512:25: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3512 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c:3513:25: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3513 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c: In function ‘ReadFasta34noalign’: io.c:3537:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3537 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c: In function ‘ReadFasta34m10_nuc’: io.c:3574:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3574 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c:3600:25: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3600 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c: In function ‘ReadFasta34m10’: io.c:3713:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3713 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c:3737:25: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3737 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c: In function ‘ReadFasta34m10_scoreonly_nucbk’: io.c:3840:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3840 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c: In function ‘ReadFasta34m10_scoreonly_nuc’: io.c:3890:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3890 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c: In function ‘ReadFasta34m10_scoreonly’: io.c:3951:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3951 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c: In function ‘ReadFasta34’: io.c:4007:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 4007 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c:4033:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 4033 | fgets( b, B-1, fp ); // initn: | ^~~~~~~~~~~~~~~~~~~ io.c:4036:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 4036 | fgets( b, B-1, fp ); // Smith-Waterman score | ^~~~~~~~~~~~~~~~~~~ io.c:4048:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 4048 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c: In function ‘ReadFasta3’: io.c:4070:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 4070 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c: In function ‘ReadFasta’: io.c:4095:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 4095 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c: In function ‘ReadOpt’: io.c:4132:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 4132 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c: In function ‘ReadOpt2’: io.c:4153:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 4153 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c: In function ‘readOtherOptions’: io.c:4249:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 4249 | fgets( b, B-1, fp ); | ^~~~~~~~~~~~~~~~~~~ io.c: In function ‘loadaamtx’: io.c:5507:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 5507 | fgets( inorder, 999, mf ); | ^~~~~~~~~~~~~~~~~~~~~~~~~ io.c:5539:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 5539 | fgets( line, 999, mf ); | ^~~~~~~~~~~~~~~~~~~~~~ io.c:5562:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 5562 | fgets( line, 999, mf ); | ^~~~~~~~~~~~~~~~~~~~~~ io.c: In function ‘readsubalignmentstable’: io.c:5718:25: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 5718 | fgets( line, linelen-1, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ io.c:5739:25: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 5739 | fgets( line, linelen-1, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ io.c: In function ‘readmccaskill’: io.c:5793:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 5793 | fgets( gett, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~ io.c:5803:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 5803 | fgets( gett, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~ io.c: In function ‘readpairfoldalign’: io.c:5862:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 5862 | fgets( gett, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~ io.c:5875:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 5875 | fgets( gett, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~ io.c:5882:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 5882 | fgets( gett, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~ io.c:5896:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 5896 | fgets( gett, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~ io.c:5902:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 5902 | fgets( gett, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~ io.c: In function ‘readexternalanchors’: io.c:6340:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 6340 | fgets( buf, 9999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~ s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mltaln9.c mltaln9.c: In function ‘check_guidetreefile’: mltaln9.c:2850:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2850 | fgets( string, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~~ mltaln9.c: In function ‘readlocalhomtable2_single_bin_noseek’: mltaln9.c:15685:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 15685 | fread( &size, sizeof( int ), 1, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mltaln9.c:15686:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 15686 | fread( &opt, sizeof( double ), 1, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mltaln9.c:15689:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 15689 | fread( m, size*sizeof( int ), 3, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mltaln9.c:15725:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 15725 | fread( &c, sizeof( char ), 1, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/s390x-linux-gnu/include/stdio.h:866, from mltaln.h:12, from mltaln9.c:1: In function ‘fgets’, inlined from ‘check_guidetreefile’ at mltaln9.c:2850:2: /usr/s390x-linux-gnu/include/bits/stdio2.h:270:16: warning: call to ‘__fgets_chk_warn’ declared with attribute warning: fgets called with bigger size than length of destination buffer [-Wattribute-warning] 270 | return __fgets_chk_warn (__s, __glibc_objsize (__s), __n, __stream); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c tddis.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c constants.c In file included from constants.c:7: blosum.c: In function ‘overridematrix’: blosum.c:370:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 370 | fgets( buf, 499, fp ); | ^~~~~~~~~~~~~~~~~~~~~ s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c nj.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c partSalignmm.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Lalignmm.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rna.c rna.c: In function ‘rnaalifoldcall’: rna.c:225:9: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 225 | system( cmd ); | ^~~~~~~~~~~~~ rna.c:245:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 245 | fgets( gett, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~ rna.c:285:9: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 285 | system( cmd ); | ^~~~~~~~~~~~~ s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Salignmm.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Dalignmm.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Falign.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Falign_localhom.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Galign11.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Lalign11.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c genalign11.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c MSalignmm.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fftFunctions.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fft.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c tditeration.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dvtditr.c dvtditr.c: In function ‘main’: dvtditr.c:1020:33: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1020 | system( "cp infile.tree GuideTree" ); // tekitou | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c defs.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c SAalignmm.c -o SAalignmm.o s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c treeOperation.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c addfunctions.c s390x-linux-gnu-gcc -o dvtditr mtxutl.o io.o mltaln9.o tddis.o constants.o nj.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o Falign.o Falign_localhom.o Galign11.o Lalign11.o genalign11.o MSalignmm.o fftFunctions.o fft.o tditeration.o dvtditr.o defs.o SAalignmm.o treeOperation.o addfunctions.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dndfast7.c dndfast7.c: In function ‘main’: dndfast7.c:326:9: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 326 | system( com ); | ^~~~~~~~~~~~~ s390x-linux-gnu-gcc -o dndfast7 dndfast7.o io.o constants.o mtxutl.o mltaln9.o tddis.o defs.o Galign11.o Lalign11.o genalign11.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dndblast.c dndblast.c: In function ‘main’: dndblast.c:201:25: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 201 | system( com ); | ^~~~~~~~~~~~~ dndblast.c:382:9: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 382 | system( com ); | ^~~~~~~~~~~~~ s390x-linux-gnu-gcc -o dndblast dndblast.o io.o constants.o mtxutl.o mltaln9.o tddis.o defs.o Galign11.o Lalign11.o genalign11.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sextet5.c s390x-linux-gnu-gcc -o sextet5 io.o constants.o mtxutl.o mltaln9.o tddis.o sextet5.o defs.o Galign11.o Lalign11.o genalign11.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mafft-distance.c s390x-linux-gnu-gcc -o mafft-distance io.o constants.o mtxutl.o mltaln9.o tddis.o mafft-distance.o defs.o Galign11.o Lalign11.o genalign11.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c MSalign11.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c suboptalign11.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pairlocalalignmain.c s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pairlocalalign.c pairlocalalign.c: In function ‘calllast_once’: pairlocalalign.c:1056:17: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1056 | system( command ); | ^~~~~~~~~~~~~~~~~ pairlocalalign.c:1092:17: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1092 | system( command ); | ^~~~~~~~~~~~~~~~~ pairlocalalign.c: In function ‘readlastresx’: pairlocalalign.c:608:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 608 | fgets( gett, 9999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~ pairlocalalign.c: In function ‘calllast_fast’: pairlocalalign.c:981:17: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 981 | system( command ); | ^~~~~~~~~~~~~~~~~ pairlocalalign.c: In function ‘lastcallthread’: pairlocalalign.c:872:33: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 872 | system( command ); | ^~~~~~~~~~~~~~~~~ pairlocalalign.c: In function ‘readlastresx_singleq’: pairlocalalign.c:374:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 374 | fgets( gett, 9999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~ pairlocalalign.c: In function ‘readhat4’: pairlocalalign.c:1532:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1532 | fgets( oneline, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~ pairlocalalign.c:1544:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1544 | fgets( oneline, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~ pairlocalalign.c: In function ‘recalllara’: pairlocalalign.c:1245:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1245 | fgets( com, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~ pairlocalalign.c: In function ‘callmxscarna_giving_bpp’: pairlocalalign.c:1408:9: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1408 | system( com ); | ^~~~~~~~~~~~~ pairlocalalign.c:1410:9: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1410 | system( com ); | ^~~~~~~~~~~~~ pairlocalalign.c:1430:9: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1430 | system( com ); // for cygwin, wakaran | ^~~~~~~~~~~~~ pairlocalalign.c:1451:9: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1451 | system( com ); // for cygwin, wakaran | ^~~~~~~~~~~~~ pairlocalalign.c:1465:9: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1465 | system( com ); // for cygwin, wakaran | ^~~~~~~~~~~~~ pairlocalalign.c:1485:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1485 | fgets( com, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~ pairlocalalign.c:1487:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1487 | fgets( com, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~ pairlocalalign.c: In function ‘calldafs_giving_bpp’: pairlocalalign.c:1291:9: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1291 | system( com ); | ^~~~~~~~~~~~~ pairlocalalign.c:1293:9: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1293 | system( com ); | ^~~~~~~~~~~~~ pairlocalalign.c:1313:9: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1313 | system( com ); // for cygwin, wakaran | ^~~~~~~~~~~~~ pairlocalalign.c:1334:9: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1334 | system( com ); // for cygwin, wakaran | ^~~~~~~~~~~~~ pairlocalalign.c:1344:9: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1344 | system( com ); // for cygwin, wakaran | ^~~~~~~~~~~~~ pairlocalalign.c:1364:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1364 | fgets( com, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~ pairlocalalign.c:1366:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1366 | fgets( com, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~ pairlocalalign.c:1368:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1368 | fgets( com, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~ pairlocalalign.c: In function ‘pairalign_node’: pairlocalalign.c:3467:9: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3467 | system( "rm -rf hat3dir" ); // toriaezu | ^~~~~~~~~~~~~~~~~~~~~~~~~~ pairlocalalign.c:3468:9: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3468 | system( "mkdir hat3dir" ); // toriaezu | ^~~~~~~~~~~~~~~~~~~~~~~~~ pairlocalalign.c:3473:17: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3473 | system( fn ); | ^~~~~~~~~~~~ s390x-linux-gnu-gcc -o pairlocalalign mtxutl.o io.o mltaln9.o tddis.o constants.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o Falign.o MSalignmm.o Galign11.o Lalign11.o genalign11.o MSalign11.o suboptalign11.o SAalignmm.o pairlocalalignmain.o pairlocalalign.o defs.o fft.o fftFunctions.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c multi2hat3s.c s390x-linux-gnu-gcc -o multi2hat3s mtxutl.o io.o mltaln9.o tddis.o constants.o multi2hat3s.o defs.o fft.o fftFunctions.o Galign11.o Lalign11.o genalign11.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pairash.c pairash.c: In function ‘prepareash’: pairash.c:639:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 639 | fgets( line, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~ pairash.c:681:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 681 | fgets( line, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~ pairash.c: In function ‘callrash’: pairash.c:485:17: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 485 | system( com ); | ^~~~~~~~~~~~~ pairash.c: In function ‘readrash’: pairash.c:277:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 277 | fgets( line, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~ pairash.c:284:25: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 284 | fgets( line, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~ pairash.c:289:25: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 289 | fgets( line, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~ pairash.c:294:25: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 294 | fgets( line, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~ pairash.c: In function ‘preparetmalign’: pairash.c:530:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 530 | fgets( line, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~ pairash.c:576:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 576 | fgets( line, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~ pairash.c:587:25: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 587 | system( command ); | ^~~~~~~~~~~~~~~~~ pairash.c: In function ‘checkcbeta’: pairash.c:321:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 321 | fgets( linec, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~ pairash.c: In function ‘calltmalign’: pairash.c:347:17: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 347 | system( com ); | ^~~~~~~~~~~~~ pairash.c:356:25: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 356 | fgets( com, 100, fp ); | ^~~~~~~~~~~~~~~~~~~~~ pairash.c: In function ‘readtmalign’: pairash.c:228:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 228 | fgets( line, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~ pairash.c:232:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 232 | fgets( line, nlenmax*2, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ pairash.c:235:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 235 | fgets( line, nlenmax*2, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ pairash.c:238:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 238 | fgets( line, nlenmax*2, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ pairash.c: In function ‘callrash.constprop’: pairash.c:428:43: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 9999 [-Wformat-overflow=] 428 | sprintf( cachefile, "%s/%s.%s.rash", cachedir, fname1, fname2 ); | ^ In file included from /usr/s390x-linux-gnu/include/stdio.h:866, from mltaln.h:12, from pairash.c:1: /usr/s390x-linux-gnu/include/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output 8 or more bytes (assuming 10007) into a destination of size 10000 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ pairash.c:484:36: warning: ‘%s’ directive writing up to 9999 bytes into a region of size 9996 [-Wformat-overflow=] 484 | sprintf( com, "cat %s > %s.rashout", cachefile, pairid ); | ^~ ~~~~~~~~~ In file included from /usr/s390x-linux-gnu/include/stdio.h:866, from mltaln.h:12, from pairash.c:1: /usr/s390x-linux-gnu/include/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 16 and 11014 bytes into a destination of size 10000 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ pairash.c: In function ‘calltmalign.constprop’: pairash.c:346:41: warning: ‘%s’ directive writing up to 9999 bytes into a region of size 9991 [-Wformat-overflow=] 346 | sprintf( com, "mkdir -p %s", cachedir ); | ^~ ~~~~~~~~ In file included from /usr/s390x-linux-gnu/include/stdio.h:866, from mltaln.h:12, from pairash.c:1: /usr/s390x-linux-gnu/include/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 10 and 10009 bytes into a destination of size 10000 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ pairash.c:349:45: warning: ‘-’ directive writing 1 byte into a region of size between 0 and 9999 [-Wformat-overflow=] 349 | sprintf( cachefile, "%s/%s%s-%s%s", cachedir, fname1, chain1, fname2, chain2 ); | ^ In file included from /usr/s390x-linux-gnu/include/stdio.h:866, from mltaln.h:12, from pairash.c:1: /usr/s390x-linux-gnu/include/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output 3 or more bytes (assuming 10002) into a destination of size 10000 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ s390x-linux-gnu-gcc -o pairash mtxutl.o io.o mltaln9.o tddis.o constants.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o Falign.o MSalignmm.o Galign11.o Lalign11.o genalign11.o MSalign11.o suboptalign11.o SAalignmm.o pairash.o defs.o fft.o fftFunctions.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c addsingle.c s390x-linux-gnu-gcc -o addsingle mtxutl.o io.o mltaln9.o tddis.o constants.o MSalignmm.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o Falign.o Falign_localhom.o Galign11.o Lalign11.o genalign11.o SAalignmm.o addsingle.o defs.o fft.o fftFunctions.o addfunctions.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -o maffttext2hex maffttext2hex.c -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread maffttext2hex.c: In function ‘main’: maffttext2hex.c:55:25: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 55 | fgets( (char *)buf, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ s390x-linux-gnu-gcc -o hex2maffttext hex2maffttext.c -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c splittbfast.c splittbfast.c: In function ‘main’: splittbfast.c:3218:17: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3218 | system( com ); | ^~~~~~~~~~~~~ s390x-linux-gnu-gcc -o splittbfast mtxutl.o io.o mltaln9.o tddis.o constants.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o Falign.o Falign_localhom.o Galign11.o Lalign11.o genalign11.o SAalignmm.o MSalignmm.o splittbfast.o defs.o fft.o fftFunctions.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c disttbfast.c disttbfast.c: In function ‘disttbfast’: disttbfast.c:4583:41: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 4583 | system( "cp infile.tree GuideTree" ); // tekitou | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ s390x-linux-gnu-gcc -o disttbfast mtxutl.o io.o mltaln9.o tddis.o constants.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o Falign.o Falign_localhom.o Galign11.o Lalign11.o genalign11.o SAalignmm.o MSalignmm.o disttbfast.o defs.o fft.o fftFunctions.o addfunctions.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c tbfast.c tbfast.c: In function ‘main’: tbfast.c:3254:33: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3254 | system( "cp infile.tree GuideTree" ); // tekitou | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ s390x-linux-gnu-gcc -o tbfast mtxutl.o io.o mltaln9.o tddis.o constants.o MSalignmm.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o Falign.o Falign_localhom.o Galign11.o Lalign11.o genalign11.o SAalignmm.o tbfast.o defs.o fft.o fftFunctions.o addfunctions.o pairlocalalign.o MSalign11.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c nodepair.c s390x-linux-gnu-gcc -o nodepair mtxutl.o io.o mltaln9.o tddis.o constants.o MSalignmm.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o Falign.o Falign_localhom.o Galign11.o Lalign11.o genalign11.o SAalignmm.o nodepair.o defs.o fft.o fftFunctions.o addfunctions.o pairlocalalign.o MSalign11.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mafft-profile.c s390x-linux-gnu-gcc -o mafft-profile io.o mtxutl.o mltaln9.o tddis.o constants.o partSalignmm.o MSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o SAalignmm.o Galign11.o Lalign11.o genalign11.o Falign.o Falign_localhom.o fftFunctions.o fft.o mafft-profile.o defs.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c f2cl.c f2cl.c: In function ‘main’: f2cl.c:287:25: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 287 | fgets( gett, B-1, orderfp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ s390x-linux-gnu-gcc -o f2cl mtxutl.o io.o f2cl.o constants.o defs.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mccaskillwrap.c mccaskillwrap.c: In function ‘main’: mccaskillwrap.c:372:25: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 372 | system( "tr -d '\\r' < _mccaskillinorg > _mccaskillin" ); // for cygwin, wakaran | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mccaskillwrap.c: In function ‘athread’: mccaskillwrap.c:115:17: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 115 | system( com ); | ^~~~~~~~~~~~~ mccaskillwrap.c:117:17: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 117 | system( com ); | ^~~~~~~~~~~~~ mccaskillwrap.c:129:17: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 129 | system( com ); // for cygwin, wakaran | ^~~~~~~~~~~~~ mccaskillwrap.c:155:25: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 155 | system( com ); | ^~~~~~~~~~~~~ mccaskillwrap.c: In function ‘readrawmccaskill’: mccaskillwrap.c:46:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 46 | fgets( gett, 999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~ s390x-linux-gnu-gcc -o mccaskillwrap mtxutl.o io.o mccaskillwrap.o constants.o defs.o mltaln9.o Galign11.o Lalign11.o genalign11.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c contrafoldwrap.c contrafoldwrap.c: In function ‘readcontrafold’: contrafoldwrap.c:57:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 57 | fgets( gett, 9999, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~ s390x-linux-gnu-gcc -o contrafoldwrap mtxutl.o io.o contrafoldwrap.o constants.o defs.o mltaln9.o Galign11.o Lalign11.o genalign11.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c countlen.c s390x-linux-gnu-gcc -o countlen mtxutl.o io.o countlen.o defs.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c seq2regtable.c s390x-linux-gnu-gcc -o seq2regtable mtxutl.o io.o seq2regtable.o defs.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c regtable2seq.c regtable2seq.c: In function ‘readereg’: regtable2seq.c:69:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 69 | fgets( gett, 999, regfp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~ regtable2seq.c:97:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fgets( gett, 999, regfp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~ regtable2seq.c: In function ‘readreg’: regtable2seq.c:120:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 120 | fgets( gett, 999, regfp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~ s390x-linux-gnu-gcc -o regtable2seq mtxutl.o io.o regtable2seq.o defs.o mltaln9.o Galign11.o Lalign11.o genalign11.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c score.c s390x-linux-gnu-gcc -o score io.o mtxutl.o mltaln9.o score.o constants.o defs.o Galign11.o Lalign11.o genalign11.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c getlag.c s390x-linux-gnu-gcc -o getlag mtxutl.o io.o mltaln9.o tddis.o constants.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Falign.o Falign_localhom.o Galign11.o Lalign11.o genalign11.o SAalignmm.o MSalignmm.o Dalignmm.o getlag.o defs.o fft.o fftFunctions.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dndpre.c s390x-linux-gnu-gcc -o dndpre dndpre.o io.o constants.o mtxutl.o mltaln9.o defs.o Galign11.o Lalign11.o genalign11.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c setcore.c s390x-linux-gnu-gcc -o setcore mtxutl.o io.o mltaln9.o tddis.o constants.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o Falign.o Falign_localhom.o Galign11.o Lalign11.o genalign11.o SAalignmm.o MSalignmm.o setcore.o defs.o fft.o fftFunctions.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o filter.o filter.c s390x-linux-gnu-gcc -o filter mtxutl.o io.o filter.o defs.o mltaln9.o Galign11.o Lalign11.o genalign11.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c replaceu.c s390x-linux-gnu-gcc -o replaceu mtxutl.o io.o replaceu.o defs.o mltaln9.o Galign11.o Lalign11.o genalign11.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c restoreu.c restoreu.c: In function ‘main’: restoreu.c:185:25: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 185 | fgets( gett, 999, dlfp ); | ^~~~~~~~~~~~~~~~~~~~~~~~ s390x-linux-gnu-gcc -o restoreu mtxutl.o io.o restoreu.o defs.o mltaln9.o Galign11.o Lalign11.o genalign11.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c setdirection.c setdirection.c: In function ‘main’: setdirection.c:132:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 132 | fgets( line, 99, difp ); | ^~~~~~~~~~~~~~~~~~~~~~~ s390x-linux-gnu-gcc -o setdirection mtxutl.o io.o setdirection.o defs.o mltaln9.o Galign11.o Lalign11.o genalign11.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c makedirectionlist.c s390x-linux-gnu-gcc -o makedirectionlist mtxutl.o io.o mltaln9.o tddis.o constants.o partSalignmm.o Lalignmm.o rna.o Salignmm.o Dalignmm.o Falign.o Falign_localhom.o Galign11.o Lalign11.o genalign11.o SAalignmm.o MSalignmm.o makedirectionlist.o defs.o fft.o fftFunctions.o addfunctions.o -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread s390x-linux-gnu-gcc -o version version.c -Denablemultithread -std=c99 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -lm -lpthread sed "s:_LIBDIR:/usr/lib/mafft/lib/mafft:" mafft.tmpl > mafft sed "s:_BINDIR:/usr/lib/mafft/bin:" mafft-homologs.tmpl > mafft-homologs.rb sed "s:_BINDIR:/usr/lib/mafft/bin:" mafft-sparsecore.tmpl > mafft-sparsecore.rb cp mafft mafft-homologs.rb mafft-sparsecore.rb ../scripts chmod 755 ../scripts/* cp mafftash_premafft.pl seekquencer_premafft.pl dvtditr dndfast7 dndblast sextet5 mafft-distance pairlocalalign multi2hat3s pairash addsingle maffttext2hex hex2maffttext splittbfast disttbfast tbfast nodepair mafft-profile f2cl mccaskillwrap contrafoldwrap countlen seq2regtable regtable2seq score getlag dndpre setcore filter replaceu restoreu setdirection makedirectionlist version ../binaries chmod 755 ../binaries/* cp mafft.1 mafft-homologs.1 ../binaries done. make[2]: Leaving directory '/<>/core' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a -O--sourcedirectory=core" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_testroot -a -O--sourcedirectory=core dh_prep -a -O--sourcedirectory=core debian/rules override_dh_auto_install make[1]: Entering directory '/<>' dh_auto_install -- PREFIX=/usr/lib/mafft MANDIR=/usr/share/man/man1 LIBDIR=/usr/lib/mafft/lib/mafft cd core && make -j1 install DESTDIR=/<>/debian/mafft AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" PREFIX=/usr/lib/mafft MANDIR=/usr/share/man/man1 LIBDIR=/usr/lib/mafft/lib/mafft make[2]: Entering directory '/<>/core' cp mafft mafft-homologs.rb mafft-sparsecore.rb ../scripts chmod 755 ../scripts/* cp mafftash_premafft.pl seekquencer_premafft.pl dvtditr dndfast7 dndblast sextet5 mafft-distance pairlocalalign multi2hat3s pairash addsingle maffttext2hex hex2maffttext splittbfast disttbfast tbfast nodepair mafft-profile f2cl mccaskillwrap contrafoldwrap countlen seq2regtable regtable2seq score getlag dndpre setcore filter replaceu restoreu setdirection makedirectionlist version ../binaries chmod 755 ../binaries/* cp mafft.1 mafft-homologs.1 ../binaries done. mkdir -p /<>/debian/mafft/usr/lib/mafft/lib/mafft chmod 755 /<>/debian/mafft/usr/lib/mafft/lib/mafft mkdir -p /<>/debian/mafft/usr/lib/mafft/bin chmod 755 /<>/debian/mafft/usr/lib/mafft/bin chmod 755 mafft mafft-homologs.rb mafft-sparsecore.rb install --strip-program=true mafft mafft-homologs.rb mafft-sparsecore.rb /<>/debian/mafft/usr/lib/mafft/bin install: WARNING: ignoring --strip-program option as -s option was not specified chmod 755 dvtditr dndfast7 dndblast sextet5 mafft-distance pairlocalalign multi2hat3s pairash addsingle maffttext2hex hex2maffttext splittbfast disttbfast tbfast nodepair mafft-profile f2cl mccaskillwrap contrafoldwrap countlen seq2regtable regtable2seq score getlag dndpre setcore filter replaceu restoreu setdirection makedirectionlist version ||: # in MinGW, it's ok if this fails strip dvtditr dndfast7 dndblast sextet5 mafft-distance pairlocalalign multi2hat3s pairash addsingle maffttext2hex hex2maffttext splittbfast disttbfast tbfast nodepair mafft-profile f2cl mccaskillwrap contrafoldwrap countlen seq2regtable regtable2seq score getlag dndpre setcore filter replaceu restoreu setdirection makedirectionlist version ||: # may fail for dash_client on mac. strip: Unable to recognise the format of the input file `dvtditr' strip: Unable to recognise the format of the input file `dndfast7' strip: Unable to recognise the format of the input file `dndblast' strip: Unable to recognise the format of the input file `sextet5' strip: Unable to recognise the format of the input file `mafft-distance' strip: Unable to recognise the format of the input file `pairlocalalign' strip: Unable to recognise the format of the input file `multi2hat3s' strip: Unable to recognise the format of the input file `pairash' strip: Unable to recognise the format of the input file `addsingle' strip: Unable to recognise the format of the input file `maffttext2hex' strip: Unable to recognise the format of the input file `hex2maffttext' strip: Unable to recognise the format of the input file `splittbfast' strip: Unable to recognise the format of the input file `disttbfast' strip: Unable to recognise the format of the input file `tbfast' strip: Unable to recognise the format of the input file `nodepair' strip: Unable to recognise the format of the input file `mafft-profile' strip: Unable to recognise the format of the input file `f2cl' strip: Unable to recognise the format of the input file `mccaskillwrap' strip: Unable to recognise the format of the input file `contrafoldwrap' strip: Unable to recognise the format of the input file `countlen' strip: Unable to recognise the format of the input file `seq2regtable' strip: Unable to recognise the format of the input file `regtable2seq' strip: Unable to recognise the format of the input file `score' strip: Unable to recognise the format of the input file `getlag' strip: Unable to recognise the format of the input file `dndpre' strip: Unable to recognise the format of the input file `setcore' strip: Unable to recognise the format of the input file `filter' strip: Unable to recognise the format of the input file `replaceu' strip: Unable to recognise the format of the input file `restoreu' strip: Unable to recognise the format of the input file `setdirection' strip: Unable to recognise the format of the input file `makedirectionlist' strip: Unable to recognise the format of the input file `version' install --strip-program=true dvtditr dndfast7 dndblast sextet5 mafft-distance pairlocalalign multi2hat3s pairash addsingle maffttext2hex hex2maffttext splittbfast disttbfast tbfast nodepair mafft-profile f2cl mccaskillwrap contrafoldwrap countlen seq2regtable regtable2seq score getlag dndpre setcore filter replaceu restoreu setdirection makedirectionlist version /<>/debian/mafft/usr/lib/mafft/lib/mafft install: WARNING: ignoring --strip-program option as -s option was not specified install --strip-program=true mafftash_premafft.pl seekquencer_premafft.pl /<>/debian/mafft/usr/lib/mafft/lib/mafft install: WARNING: ignoring --strip-program option as -s option was not specified install --strip-program=true -m 644 mafft.1 mafft-homologs.1 /<>/debian/mafft/usr/lib/mafft/lib/mafft install: WARNING: ignoring --strip-program option as -s option was not specified ( cd /<>/debian/mafft/usr/lib/mafft/bin; \ rm -f linsi ginsi einsi fftns fftnsi nwns nwnsi xinsi qinsi; \ rm -f mafft-linsi mafft-ginsi mafft-einsi mafft-fftns mafft-fftnsi mafft-nwns mafft-nwnsi mafft-xinsi mafft-qinsi mafft-randomcore.rb ; \ ln -s mafft linsi; ln -s mafft ginsi; ln -s mafft fftns; \ ln -s mafft fftnsi; ln -s mafft nwns; ln -s mafft nwnsi; \ ln -s mafft einsi; \ ln -s mafft mafft-linsi; ln -s mafft mafft-ginsi; ln -s mafft mafft-fftns; \ ln -s mafft mafft-fftnsi; ln -s mafft mafft-nwns; ln -s mafft mafft-nwnsi; \ ln -s mafft mafft-einsi; ln -s mafft mafft-xinsi; ln -s mafft mafft-qinsi;\ rm -f mafft-profile mafft-profile.exe; ln -s /usr/lib/mafft/lib/mafft/mafft-profile .; \ rm -f mafft-distance mafft-distance.exe; ln -s /usr/lib/mafft/lib/mafft/mafft-distance . ) mkdir -p /<>/debian/mafft/usr/share/man/man1 chmod 755 /<>/debian/mafft/usr/share/man/man1 install --strip-program=true -m 644 mafft.1 mafft-homologs.1 /<>/debian/mafft/usr/share/man/man1 install: WARNING: ignoring --strip-program option as -s option was not specified make[2]: Leaving directory '/<>/core' rm debian/mafft/usr/lib/mafft/lib/mafft/*.1 make[1]: Leaving directory '/<>' dh_installdocs -a -O--sourcedirectory=core dh_installchangelogs -a -O--sourcedirectory=core dh_installman -a -O--sourcedirectory=core dh_installsystemduser -a -O--sourcedirectory=core dh_perl -a -O--sourcedirectory=core dh_link -a -O--sourcedirectory=core dh_strip_nondeterminism -a -O--sourcedirectory=core debian/rules override_dh_compress make[1]: Entering directory '/<>' dh_compress -X test/sample make[1]: Leaving directory '/<>' dh_fixperms -a -O--sourcedirectory=core dh_missing -a -O--sourcedirectory=core dh_dwz -a -O--sourcedirectory=core dh_strip -a -O--sourcedirectory=core dh_makeshlibs -a -O--sourcedirectory=core dh_shlibdeps -a -O--sourcedirectory=core dh_installdeb -a -O--sourcedirectory=core dh_gencontrol -a -O--sourcedirectory=core dh_md5sums -a -O--sourcedirectory=core dh_builddeb -a -O--sourcedirectory=core dpkg-deb: building package 'mafft' in '../mafft_7.505-1_s390x.deb'. dpkg-deb: building package 'mafft-dbgsym' in '../mafft-dbgsym_7.505-1_s390x.deb'. dpkg-genbuildinfo --build=any -O../mafft_7.505-1_s390x.buildinfo dpkg-genchanges --build=any -O../mafft_7.505-1_s390x.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2022-06-30T02:06:29Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ mafft_7.505-1_s390x.changes: ---------------------------- Format: 1.8 Date: Sun, 26 Jun 2022 00:45:31 +0530 Source: mafft Binary: mafft mafft-dbgsym Built-For-Profiles: cross nocheck Architecture: s390x Version: 7.505-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: mafft - Multiple alignment program for amino acid or nucleotide sequences Changes: mafft (7.505-1) unstable; urgency=medium . * Team upload. * New upstream version 7.505 * Removed myself from uploaders Checksums-Sha1: 443add4165c376695902560b0ac46681002c0cd4 9920808 mafft-dbgsym_7.505-1_s390x.deb fcc36811ce70f02ae60302bfa4153ca9ce5dd3d4 4976 mafft_7.505-1_s390x.buildinfo 0800bffba3967a639af46afd336840c7f1117948 915332 mafft_7.505-1_s390x.deb Checksums-Sha256: b126f020755f5c87cae3421cba7abb9dfa29649bc1cd84ae212b6b292a9dd70b 9920808 mafft-dbgsym_7.505-1_s390x.deb 7595831995dc849e8342c6d0b7a7e2a67a0658ee260ee668fb90241c8896c7d8 4976 mafft_7.505-1_s390x.buildinfo 1c1b79b7aff05c475014334f750f78c778ee10e61e495884cde39ca1d69df643 915332 mafft_7.505-1_s390x.deb Files: 86e0dd9d31c16ad1ff064f92810c4306 9920808 debug optional mafft-dbgsym_7.505-1_s390x.deb 82ec889f3854ff16787dfafcb968b1e0 4976 science optional mafft_7.505-1_s390x.buildinfo 1ac1e17cac00b5b1d7acf1e15fad3e0e 915332 science optional mafft_7.505-1_s390x.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: mafft Binary: mafft mafft-dbgsym Architecture: s390x Version: 7.505-1 Checksums-Md5: 86e0dd9d31c16ad1ff064f92810c4306 9920808 mafft-dbgsym_7.505-1_s390x.deb 1ac1e17cac00b5b1d7acf1e15fad3e0e 915332 mafft_7.505-1_s390x.deb Checksums-Sha1: 443add4165c376695902560b0ac46681002c0cd4 9920808 mafft-dbgsym_7.505-1_s390x.deb 0800bffba3967a639af46afd336840c7f1117948 915332 mafft_7.505-1_s390x.deb Checksums-Sha256: b126f020755f5c87cae3421cba7abb9dfa29649bc1cd84ae212b6b292a9dd70b 9920808 mafft-dbgsym_7.505-1_s390x.deb 1c1b79b7aff05c475014334f750f78c778ee10e61e495884cde39ca1d69df643 915332 mafft_7.505-1_s390x.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Thu, 30 Jun 2022 02:06:29 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.71-2), automake (= 1:1.16.5-1.3), autopoint (= 0.21-6), autotools-dev (= 20220109.1), base-files (= 12.2), base-passwd (= 3.5.52), bash (= 5.1-6.1), binutils (= 2.38.50.20220627-1), binutils-common (= 2.38.50.20220627-1), binutils-x86-64-linux-gnu (= 2.38.50.20220627-1), bsdextrautils (= 2.38-4), bsdutils (= 1:2.38-4), build-essential (= 12.9), bzip2 (= 1.0.8-5), coreutils (= 8.32-4.1), cpp (= 4:11.2.0-2), cpp-11 (= 11.3.0-3), dash (= 0.5.11+git20210903+057cd650a4ed-8), debconf (= 1.5.79), debhelper (= 13.7.1), debianutils (= 5.7-0.2), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.0-1), diffutils (= 1:3.7-5), dpkg (= 1.21.8), dpkg-dev (= 1.21.8), dwz (= 0.14-1), file (= 1:5.41-4), findutils (= 4.9.0-3), g++ (= 4:11.2.0-2), g++-11 (= 11.3.0-3), gcc (= 4:11.2.0-2), gcc-11 (= 11.3.0-3), gcc-11-base (= 11.3.0-3), gcc-12-base (= 12.1.0-4), gettext (= 0.21-6), gettext-base (= 0.21-6), grep (= 3.7-1), groff-base (= 1.22.4-8), gzip (= 1.12-1), hostname (= 3.23), init-system-helpers (= 1.63), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.3.1-1), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.3.0-3), libatomic1 (= 12.1.0-4), libattr1 (= 1:2.5.1-1), libaudit-common (= 1:3.0.7-1), libaudit1 (= 1:3.0.7-1+b1), libbinutils (= 2.38.50.20220627-1), libblkid1 (= 2.38-4), libbz2-1.0 (= 1.0.8-5), libc-bin (= 2.33-7), libc-dev-bin (= 2.33-7), libc6 (= 2.33-7), libc6-dev (= 2.33-7), libcap-ng0 (= 0.8.3-1), libcap2 (= 1:2.44-1), libcc1-0 (= 12.1.0-4), libcom-err2 (= 1.46.5-2), libcrypt-dev (= 1:4.4.27-1.1), libcrypt1 (= 1:4.4.27-1.1), libctf-nobfd0 (= 2.38.50.20220627-1), libctf0 (= 2.38.50.20220627-1), libdb5.3 (= 5.3.28+dfsg1-0.9), libdebconfclient0 (= 0.263), libdebhelper-perl (= 13.7.1), libdpkg-perl (= 1.21.8), libelf1 (= 0.187-1), libfile-stripnondeterminism-perl (= 1.13.0-1), libgcc-11-dev (= 11.3.0-3), libgcc-s1 (= 12.1.0-4), libgcrypt20 (= 1.10.1-2), libgdbm-compat4 (= 1.23-1), libgdbm6 (= 1.23-1), libgmp10 (= 2:6.2.1+dfsg1-1), libgomp1 (= 12.1.0-4), libgpg-error0 (= 1.45-2), libgprofng0 (= 2.38.50.20220627-1), libgssapi-krb5-2 (= 1.19.2-2+b2), libicu71 (= 71.1-3), libisl23 (= 0.24-2), libitm1 (= 12.1.0-4), libk5crypto3 (= 1.19.2-2+b2), libkeyutils1 (= 1.6.3-1), libkrb5-3 (= 1.19.2-2+b2), libkrb5support0 (= 1.19.2-2+b2), liblsan0 (= 12.1.0-4), liblz4-1 (= 1.9.3-2), liblzma5 (= 5.2.5-2.1), libmagic-mgc (= 1:5.41-4), libmagic1 (= 1:5.41-4), libmount1 (= 2.38-4), libmpc3 (= 1.2.1-2), libmpfr6 (= 4.1.0-3), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libpam-modules (= 1.4.0-13), libpam-modules-bin (= 1.4.0-13), libpam-runtime (= 1.4.0-13), libpam0g (= 1.4.0-13), libpcre2-8-0 (= 10.40-1), libpcre3 (= 2:8.39-14), libperl5.34 (= 5.34.0-4), libpipeline1 (= 1.5.6-1), libquadmath0 (= 12.1.0-4), libseccomp2 (= 2.5.4-1), libselinux1 (= 3.4-1), libsigsegv2 (= 2.14-1), libsmartcols1 (= 2.38-4), libssl3 (= 3.0.4-2), libstdc++-11-dev (= 11.3.0-3), libstdc++6 (= 12.1.0-4), libsub-override-perl (= 0.09-3), libsystemd0 (= 251.2-7), libtinfo6 (= 6.3+20220423-2), libtirpc-common (= 1.3.2-2), libtirpc-dev (= 1.3.2-2), libtirpc3 (= 1.3.2-2), libtool (= 2.4.7-4), libtsan0 (= 11.3.0-3), libubsan1 (= 12.1.0-4), libuchardet0 (= 0.0.7-1), libudev1 (= 251.2-7), libunistring2 (= 1.0-1), libuuid1 (= 2.38-4), libxml2 (= 2.9.14+dfsg-1), libzstd1 (= 1.5.2+dfsg-1), linux-libc-dev (= 5.18.5-1), login (= 1:4.11.1+dfsg1-2), lsb-base (= 11.2), m4 (= 1.4.18-5), make (= 4.3-4.1), man-db (= 2.10.2-1), mawk (= 1.3.4.20200120-3.1), ncurses-base (= 6.3+20220423-2), ncurses-bin (= 6.3+20220423-2), patch (= 2.7.6-7), perl (= 5.34.0-4), perl-base (= 5.34.0-4), perl-modules-5.34 (= 5.34.0-4), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.2-4), sed (= 4.8-1), sensible-utils (= 0.0.17), sysvinit-utils (= 3.03-1), tar (= 1.34+dfsg-1), util-linux (= 2.38-4), util-linux-extra (= 2.38-4), xz-utils (= 5.2.5-2.1), zlib1g (= 1:1.2.11.dfsg-4) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1656184531" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ mafft-dbgsym_7.505-1_s390x.deb ------------------------------ new Debian package, version 2.0. size 9920808 bytes: control archive=2048 bytes. 1635 bytes, 12 lines control 3473 bytes, 33 lines md5sums Package: mafft-dbgsym Source: mafft Version: 7.505-1 Auto-Built-Package: debug-symbols Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 12534 Depends: mafft (= 7.505-1) Section: debug Priority: optional Description: debug symbols for mafft Build-Ids: 0f5c64ad84e7cb6bd7ee9903a01e34dc92f1dab1 12d77fc85e0cf0232e397ed1f8f292dee89af2e9 163219b99d59157f5e999ae5c5ff9f94fa96b22e 18c0ff593ff6b022e8dd04d1c00ad10b624f44f9 289d340c626f175dc259fa77f21ab4b06e65bbd6 28b29dc9862c10d25c6018036c10564162efd379 2d0973a0a3282fc050941d5ec52ed1e03733c3c8 36aabaa8581b03f4aed60740dc51b209de73bf21 377af61801384d5c6d07b1082e90c63b0b239f83 4614a436e56de10b18e630c48efc4cabeadfaa99 4c131ddc33b66f399d473d10dfed8103e91cd954 500145ace76f8058c0fcf4e62255ede1ec6e6c68 583875440a72f09334175a61bdb3e6d5641115ed 5b6112724db3ca03068516bed5f20ec003f171ac 62ce235978f2a265a421233d01cb1da6e6096c2f 6dfbd85942c2fd2e4712baad8e77ef60fd90341a 72a20f4fff81f9e71b26cee4b8d0139cb264f846 7829729ef6942683cfc57e5d2992cfef1ec2aece 8776d22c9914b5c8fad29267502675425c96fb30 8997db21aa0bee8afdeda419dc8734f20c03c0a7 ac388b4258af63a6a0cbdf70677fb73b8b31f970 acecc18a5a69b5f3c4211609b9ff587e4c2f7f5a adcfe80a7c856a26e6db415561013a00331c011b b5dc063ae9022fee0744fc72dba4b330db9d8ff5 b7596c6d33f6da658543373d43aa805514b4050b bb076a4244eba33d92f13637c7215a14546fa0c5 d2e07fb98a0e316e5dd684111054da6f18b6f128 d9a1cfb350dc3731c2ef64aced8249e3da554676 dbb5616002ef75657477a50f6c31dace6ca89f86 e9f901d4ca7b881d3407e5c685bc6905551886f1 f582938b2c836e47d0c5cb00fb7e688796029c8b ffb7cb580919232ebb424442213740dd246b4b9c drwxr-xr-x root/root 0 2022-06-25 19:15 ./ drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/ drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/lib/ drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/lib/debug/ drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/lib/debug/.build-id/0f/ -rw-r--r-- root/root 650048 2022-06-25 19:15 ./usr/lib/debug/.build-id/0f/5c64ad84e7cb6bd7ee9903a01e34dc92f1dab1.debug drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/lib/debug/.build-id/12/ -rw-r--r-- root/root 578376 2022-06-25 19:15 ./usr/lib/debug/.build-id/12/d77fc85e0cf0232e397ed1f8f292dee89af2e9.debug drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/lib/debug/.build-id/16/ -rw-r--r-- root/root 127928 2022-06-25 19:15 ./usr/lib/debug/.build-id/16/3219b99d59157f5e999ae5c5ff9f94fa96b22e.debug drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/lib/debug/.build-id/18/ -rw-r--r-- root/root 576112 2022-06-25 19:15 ./usr/lib/debug/.build-id/18/c0ff593ff6b022e8dd04d1c00ad10b624f44f9.debug drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/lib/debug/.build-id/28/ -rw-r--r-- root/root 692640 2022-06-25 19:15 ./usr/lib/debug/.build-id/28/9d340c626f175dc259fa77f21ab4b06e65bbd6.debug -rw-r--r-- root/root 599144 2022-06-25 19:15 ./usr/lib/debug/.build-id/28/b29dc9862c10d25c6018036c10564162efd379.debug drwxr-xr-x root/root 0 2022-06-25 19:15 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2022-06-25 19:15 ./usr/lib/debug/.build-id/d9/a1cfb350dc3731c2ef64aced8249e3da554676.debug drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/lib/debug/.build-id/db/ -rw-r--r-- root/root 349128 2022-06-25 19:15 ./usr/lib/debug/.build-id/db/b5616002ef75657477a50f6c31dace6ca89f86.debug drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/lib/debug/.build-id/e9/ -rw-r--r-- root/root 321320 2022-06-25 19:15 ./usr/lib/debug/.build-id/e9/f901d4ca7b881d3407e5c685bc6905551886f1.debug drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/lib/debug/.build-id/f5/ -rw-r--r-- root/root 6576 2022-06-25 19:15 ./usr/lib/debug/.build-id/f5/82938b2c836e47d0c5cb00fb7e688796029c8b.debug drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/lib/debug/.build-id/ff/ -rw-r--r-- root/root 367848 2022-06-25 19:15 ./usr/lib/debug/.build-id/ff/b7cb580919232ebb424442213740dd246b4b9c.debug drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/lib/debug/.dwz/s390x-linux-gnu/ -rw-r--r-- root/root 31640 2022-06-25 19:15 ./usr/lib/debug/.dwz/s390x-linux-gnu/mafft.debug drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/share/ drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/share/doc/ lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/share/doc/mafft-dbgsym -> mafft mafft_7.505-1_s390x.deb ----------------------- new Debian package, version 2.0. size 915332 bytes: control archive=2364 bytes. 1387 bytes, 30 lines control 3848 bytes, 55 lines md5sums Package: mafft Version: 7.505-1 Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 13043 Depends: libc6 (>= 2.29), perl:any Recommends: blast2, libwww-perl, lynx, ruby Enhances: t-coffee Section: science Priority: optional Homepage: https://mafft.cbrc.jp/alignment/software/ Description: Multiple alignment program for amino acid or nucleotide sequences MAFFT is a multiple sequence alignment program which offers three accuracy-oriented methods: * L-INS-i (probably most accurate; recommended for <200 sequences; iterative refinement method incorporating local pairwise alignment information), * G-INS-i (suitable for sequences of similar lengths; recommended for <200 sequences; iterative refinement method incorporating global pairwise alignment information), * E-INS-i (suitable for sequences containing large unalignable regions; recommended for <200 sequences), and five speed-oriented methods: * FFT-NS-i (iterative refinement method; two cycles only), * FFT-NS-i (iterative refinement method; max. 1000 iterations), * FFT-NS-2 (fast; progressive method), * FFT-NS-1 (very fast; recommended for >2000 sequences; progressive method with a rough guide tree), * NW-NS-PartTree-1 (recommended for ∼50,000 sequences; progressive method with the PartTree algorithm). drwxr-xr-x root/root 0 2022-06-25 19:15 ./ drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/ drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/bin/ lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/bin/mafft -> ../lib/mafft/bin/mafft lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/bin/mafft-homologs -> ../lib/mafft/bin/mafft-homologs.rb lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/bin/mafft-profile -> ../lib/mafft/bin/mafft-profile drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/lib/ drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/lib/mafft/ drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/lib/mafft/bin/ lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/lib/mafft/bin/einsi -> mafft lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/lib/mafft/bin/fftns -> mafft lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/lib/mafft/bin/fftnsi -> mafft lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/lib/mafft/bin/ginsi -> mafft lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/lib/mafft/bin/linsi -> mafft -rwxr-xr-x root/root 108945 2022-06-25 19:15 ./usr/lib/mafft/bin/mafft lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/lib/mafft/bin/mafft-distance -> ../lib/mafft/mafft-distance lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/lib/mafft/bin/mafft-einsi -> mafft lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/lib/mafft/bin/mafft-fftns -> mafft lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/lib/mafft/bin/mafft-fftnsi -> mafft lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/lib/mafft/bin/mafft-ginsi -> mafft -rwxr-xr-x root/root 11551 2022-06-25 19:15 ./usr/lib/mafft/bin/mafft-homologs.rb lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/lib/mafft/bin/mafft-linsi -> mafft lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/lib/mafft/bin/mafft-nwns -> mafft lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/lib/mafft/bin/mafft-nwnsi -> mafft lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/lib/mafft/bin/mafft-profile -> ../lib/mafft/mafft-profile lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/lib/mafft/bin/mafft-qinsi -> mafft -rwxr-xr-x root/root 7788 2022-06-25 19:15 ./usr/lib/mafft/bin/mafft-sparsecore.rb lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/lib/mafft/bin/mafft-xinsi -> mafft lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/lib/mafft/bin/nwns -> mafft lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/lib/mafft/bin/nwnsi -> mafft drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/lib/mafft/lib/ drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/ -rwxr-xr-x root/root 657616 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/addsingle -rwxr-xr-x root/root 354512 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/contrafoldwrap -rwxr-xr-x root/root 100728 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/countlen -rwxr-xr-x root/root 674000 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/disttbfast -rwxr-xr-x root/root 370896 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/dndblast -rwxr-xr-x root/root 366800 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/dndfast7 -rwxr-xr-x root/root 354520 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/dndpre -rwxr-xr-x root/root 674000 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/dvtditr -rwxr-xr-x root/root 166096 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/f2cl -rwxr-xr-x root/root 293240 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/filter -rwxr-xr-x root/root 596176 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/getlag -rwxr-xr-x root/root 10304 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/hex2maffttext -rwxr-xr-x root/root 366800 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/mafft-distance -rwxr-xr-x root/root 596176 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/mafft-profile -rwxr-xr-x root/root 10475 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/mafftash_premafft.pl -rwxr-xr-x root/root 10304 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/maffttext2hex -rwxr-xr-x root/root 624864 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/makedirectionlist -rwxr-xr-x root/root 354512 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/mccaskillwrap -rwxr-xr-x root/root 379088 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/multi2hat3s -rwxr-xr-x root/root 669904 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/nodepair -rwxr-xr-x root/root 612560 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/pairash -rwxr-xr-x root/root 637136 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/pairlocalalign -rwxr-xr-x root/root 293240 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/regtable2seq -rwxr-xr-x root/root 293240 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/replaceu -rwxr-xr-x root/root 293240 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/restoreu -rwxr-xr-x root/root 350416 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/score -rwxr-xr-x root/root 15541 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/seekquencer_premafft.pl -rwxr-xr-x root/root 100728 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/seq2regtable -rwxr-xr-x root/root 596176 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/setcore -rwxr-xr-x root/root 293248 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/setdirection -rwxr-xr-x root/root 366800 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/sextet5 -rwxr-xr-x root/root 624848 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/splittbfast -rwxr-xr-x root/root 714960 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/tbfast -rwxr-xr-x root/root 6208 2022-06-25 19:15 ./usr/lib/mafft/lib/mafft/version drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/share/ drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/share/doc/mafft/ -rw-r--r-- root/root 4095 2022-06-25 19:15 ./usr/share/doc/mafft/changelog.Debian.gz -rw-r--r-- root/root 2013 2021-11-02 13:29 ./usr/share/doc/mafft/copyright drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/share/doc/mafft/test/ -rw-r--r-- root/root 16616 2022-04-10 07:14 ./usr/share/doc/mafft/test/sample -rw-r--r-- root/root 30112 2022-04-10 07:14 ./usr/share/doc/mafft/test/sample.dpparttree -rw-r--r-- root/root 28816 2022-04-10 07:14 ./usr/share/doc/mafft/test/sample.fftns2 -rw-r--r-- root/root 28996 2022-04-10 07:14 ./usr/share/doc/mafft/test/sample.fftnsi -rw-r--r-- root/root 29896 2022-04-10 07:14 ./usr/share/doc/mafft/test/sample.gins1 -rw-r--r-- root/root 29572 2022-04-10 07:14 ./usr/share/doc/mafft/test/sample.ginsi -rw-r--r-- root/root 41380 2022-04-10 07:14 ./usr/share/doc/mafft/test/sample.ginsi.allowshift -rw-r--r-- root/root 28888 2022-04-10 07:14 ./usr/share/doc/mafft/test/sample.lins1 -rw-r--r-- root/root 29500 2022-04-10 07:14 ./usr/share/doc/mafft/test/sample.linsi -rw-r--r-- root/root 30112 2022-04-10 07:14 ./usr/share/doc/mafft/test/sample.parttree -rw-r--r-- root/root 1502 2022-04-10 07:14 ./usr/share/doc/mafft/test/samplerna -rw-r--r-- root/root 1916 2022-04-10 07:14 ./usr/share/doc/mafft/test/samplerna.qinsi -rw-r--r-- root/root 1916 2022-04-10 07:14 ./usr/share/doc/mafft/test/samplerna.xinsi -rw-r--r-- root/root 908 2022-04-10 07:14 ./usr/share/doc/mafft/test/script drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/share/man/ drwxr-xr-x root/root 0 2022-06-25 19:15 ./usr/share/man/man1/ lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/share/man/man1/einsi.1.gz -> mafft.1.gz lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/share/man/man1/fftns.1.gz -> mafft.1.gz lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/share/man/man1/fftnsi.1.gz -> mafft.1.gz lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/share/man/man1/ginsi.1.gz -> mafft.1.gz lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/share/man/man1/linsi.1.gz -> mafft.1.gz lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/share/man/man1/mafft-einsi.1.gz -> mafft.1.gz lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/share/man/man1/mafft-fftns.1.gz -> mafft.1.gz lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/share/man/man1/mafft-fftnsi.1.gz -> mafft.1.gz lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/share/man/man1/mafft-ginsi.1.gz -> mafft.1.gz -rw-r--r-- root/root 2130 2022-06-25 19:15 ./usr/share/man/man1/mafft-homologs.1.gz lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/share/man/man1/mafft-linsi.1.gz -> mafft.1.gz lrwxrwxrwx root/root 0 2022-06-25 19:15 ./usr/share/man/man1/mafft-profile.1.gz -> mafft.1.gz -rw-r--r-- root/root 4421 2022-06-25 19:15 ./usr/share/man/man1/mafft.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [534 B] Get:5 copy:/<>/apt_archive ./ Packages [620 B] Fetched 2117 B in 0s (79.4 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libhttp-server-simple-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libhttp-server-simple-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip sbuild-build-depends-lintian-dummy:s390x t1utils unzip 0 upgraded, 131 newly installed, 0 to remove and 0 not upgraded. Need to get 14.0 MB of archives. After this operation, 51.4 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 6.3 [19.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 openssl amd64 3.0.4-2 [1421 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 ca-certificates all 20211016 [156 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.64-1 [36.6 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.5-3 [51.3 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.35-2 [577 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.38.5-1 [830 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.35-2 [960 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 iso-codes all 4.10.0-1 [2825 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libaliased-perl all 0.34-2 [14.2 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.40+b1 [72.1 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-2 [11.2 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-2 [13.1 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b3 [16.0 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-2 [25.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.31-1 [24.2 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-2 [8044 B] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-2 [45.7 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libberkeleydb-perl amd64 0.64-1+b2 [124 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-4 [13.0 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 5.10-1 [91.0 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.78-1 [105 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.54-1 [224 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b8 [37.7 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1+b2 [15.5 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-tiny-perl all 2.28-1 [17.3 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-util-perl amd64 1.102-1+b2 [25.7 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-install-perl all 0.928-2 [11.0 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-optlist-perl all 0.112-1 [11.8 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-perl all 0.988-1 [51.9 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.30-1 [130 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002002-1 [37.8 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-xs-perl amd64 0.430-3 [40.3 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-messagepack-perl amd64 1.02-1 [35.7 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-2 [33.7 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-netmask-perl all 2.0001-1 [32.2 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2 [104 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-ip-perl all 0.30-1 [21.0 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-uri-perl all 0.07-2 [11.2 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b3 [26.1 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-address-xs-perl amd64 1.04-1+b4 [28.0 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libencode-locale-perl all 1.05-2 [13.5 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.09-1 [16.4 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-2 [7448 B] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.11-2 [8992 B] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1.1 [28.0 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libhttp-date-perl all 6.05-1 [10.4 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-listing-perl all 6.15-1 [12.6 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-1 [19.9 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libhttp-message-perl all 6.37-1 [80.9 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-form-perl all 6.07-1 [22.9 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-html5-entities-perl all 0.004-2 [21.6 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tree-perl all 5.07-2 [213 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libhttp-negotiate-perl all 6.01-1 [12.8 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 7+b1 [7924 B] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.92-2 [343 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.074-2 [220 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-http-perl all 6.22-1 [25.3 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 liblwp-protocol-https-perl all 6.10-1 [12.2 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libwww-perl all 6.67-1 [194 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libhttp-server-simple-perl all 0.52-2 [29.4 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libio-interactive-perl all 1.023-1 [11.5 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004003-1 [13.1 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-someutils-perl all 0.58-1 [36.5 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-utilsby-perl all 0.12-1 [16.1 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 liblz1 amd64 1.13-3 [41.9 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 libmldbm-perl all 2.05-3 [18.8 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.005004-3 [60.5 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 libmouse-perl amd64 2.5.10-1+b2 [173 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-2 [11.9 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1+b2 [13.9 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.122-1 [56.0 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-gzip-perl amd64 0.20-1 [17.5 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-utf8-strict-perl amd64 0.009-1+b1 [12.2 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main amd64 libproc-processtable-perl amd64 0.634-1+b1 [46.9 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main amd64 libregexp-wildcards-perl all 1.05-2 [14.1 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.023+ds-1 [99.7 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.023+ds-1 [104 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main amd64 libsort-versions-perl all 1.62-2 [10.7 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main amd64 libxs-parse-keyword-perl amd64 0.24-1 [53.0 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main amd64 libsyntax-keyword-try-perl amd64 0.27-1 [28.5 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main amd64 libterm-readkey-perl amd64 2.38-1+b3 [27.8 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-5 [8656 B] Get:118 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.13-1+b1 [13.6 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.9-1+b1 [197 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b4 [75.8 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b3 [20.3 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main amd64 libwww-mechanize-perl all 2.09-1 [115 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.83+ds-1+b1 [35.9 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main amd64 plzip amd64 1.10-3 [64.1 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-26 [171 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.115.2 [1416 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 14.0 MB in 0s (33.0 MB/s) Selecting previously unselected package netbase. 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Setting up plzip (1.10-3) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-1+b3) ... Setting up libmouse-perl (2.5.10-1+b2) ... Setting up libdata-messagepack-perl (1.02-1) ... Setting up libdynaloader-functions-perl (0.003-2) ... Setting up libtext-glob-perl (0.11-2) ... Setting up libclass-method-modifiers-perl (2.13-1) ... Setting up liblist-compare-perl (0.55-1) ... Setting up libclone-perl (0.45-1+b2) ... Setting up libyaml-0-2:amd64 (0.2.2-1) ... Setting up libsub-identify-perl (0.14-2) ... Setting up libcpanel-json-xs-perl:amd64 (4.30-1) ... Setting up libhtml-tagset-perl (3.20-4) ... Setting up libdevel-size-perl (0.83-1+b3) ... Setting up unzip (6.0-26) ... Setting up libsqlite3-0:amd64 (3.38.5-1) ... Setting up liblwp-mediatypes-perl (6.04-1) ... Setting up libyaml-libyaml-perl (0.83+ds-1+b1) ... Setting up libio-interactive-perl (1.023-1) ... Setting up libtry-tiny-perl (0.31-1) ... Setting up perl-openssl-defaults:amd64 (7+b1) ... Setting up libmldbm-perl (2.05-3) ... Setting up liblzo2-2:amd64 (2.10-2) ... Setting up libtime-moment-perl (0.44-1+b4) ... Setting up libencode-locale-perl (1.05-2) ... Setting up libassuan0:amd64 (2.5.5-3) ... Setting up libconfig-tiny-perl (2.28-1) ... Setting up libsereal-encoder-perl:amd64 (4.023+ds-1) ... Setting up liblist-utilsby-perl (0.12-1) ... Setting up libnet-netmask-perl (2.0001-1) ... Setting up libsub-install-perl (0.928-2) ... Setting up libnumber-compare-perl (0.03-2) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004003-1) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2) ... Setting up libclass-data-inheritable-perl (0.08-3) ... 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Setting up libproc-processtable-perl:amd64 (0.634-1+b1) ... Setting up libpath-tiny-perl (0.122-1) ... Setting up lzop (1.04-2) ... Setting up gpgconf (2.2.35-2) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libipc-run3-perl (0.048-2) ... Setting up libregexp-wildcards-perl (1.05-2) ... Setting up libaliased-perl (0.34-2) ... Setting up netbase (6.3) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libdevel-stacktrace-perl (2.0400-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b8) ... Setting up libsort-versions-perl (1.62-2) ... Setting up libexporter-tiny-perl (1.002002-1) ... Setting up libterm-readkey-perl (2.38-1+b3) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.0.4-2) ... Setting up libtext-levenshteinxs-perl (0.03-5) ... Setting up libperlio-gzip-perl (0.20-1) ... Setting up libhtml-html5-entities-perl (0.004-2) ... Setting up libsereal-decoder-perl (4.023+ds-1) ... Setting up libmarkdown2:amd64 (2.2.7-2) ... Setting up liburi-perl (5.10-1) ... Setting up iso-codes (4.10.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up gpg (2.2.35-2) ... Setting up libdata-validate-ip-perl (0.30-1) ... Setting up libemail-address-xs-perl (1.04-1+b4) ... Setting up libnet-ssleay-perl:amd64 (1.92-2) ... Setting up libhttp-date-perl (6.05-1) ... Setting up libfile-basedir-perl (0.09-1) ... Setting up libfile-listing-perl (6.15-1) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libnet-http-perl (6.22-1) ... Setting up libtext-markdown-discount-perl:amd64 (0.13-1+b1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl (0.008-1+b3) ... Setting up ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 127 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.112-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:amd64 (3.78-1) ... Setting up libio-socket-ssl-perl (2.074-2) ... Setting up libsub-exporter-perl (0.988-1) ... Setting up libhttp-message-perl (6.37-1) ... Setting up libhtml-form-perl (6.07-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-1) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libhtml-tree-perl (5.07-2) ... Setting up libparams-classify-perl:amd64 (0.015-2) ... Setting up libcgi-pm-perl (4.54-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libhttp-server-simple-perl (0.52-2) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005004-3) ... Setting up liblist-someutils-perl (0.58-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.67-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.09-1) ... Setting up liblwp-protocol-https-perl (6.10-1) ... Setting up lintian (2.115.2) ... Setting up sbuild-build-depends-lintian-dummy:s390x (0.invalid.0) ... Processing triggers for libc-bin (2.33-7) ... Processing triggers for man-db (2.10.2-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 130416 Build-Time: 63 Distribution: unstable Foreign Architectures: s390x Host Architecture: s390x Install-Time: 21 Job: mafft_7.505-1 Lintian: pass Machine Architecture: amd64 Package: mafft Package-Time: 97 Source-Version: 7.505-1 Space: 130416 Status: successful Version: 7.505-1 -------------------------------------------------------------------------------- Finished at 2022-06-30T02:06:29Z Build needed 00:01:37, 130416k disk space