sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | microbiomeutil 20101212+dfsg1-5 (armhf) Thu, 13 Jan 2022 09:13:49 +0000 | +==============================================================================+ Package: microbiomeutil Version: 20101212+dfsg1-5 Source Version: 20101212+dfsg1-5 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-e0eaef7d-3855-410d-8387-e3ae5ecb85da' with '<>' I: NOTICE: Log filtering will replace 'build/microbiomeutil-qKoITT/resolver-Vxmzyi' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [165 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2022-01-13-0804.32-F-2022-01-13-0804.32.pdiff [2753 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2022-01-13-0804.32-F-2022-01-13-0804.32.pdiff [11.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2022-01-13-0804.32-F-2022-01-13-0804.32.pdiff [2753 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2022-01-13-0804.32-F-2022-01-13-0804.32.pdiff [11.9 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main armhf Packages [8569 kB] Fetched 8876 kB in 3s (3207 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: cpp-11 gcc-11 gcc-11-base libasan6 libatomic1 libcc1-0 libgcc-11-dev libgcc-s1 libgomp1 libitm1 liblsan0 libquadmath0 libstdc++6 libtsan0 libubsan1 15 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 36.6 MB of archives. After this operation, 41.0 kB disk space will be freed. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 libcc1-0 amd64 11.2.0-14 [47.1 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1 amd64 11.2.0-14 [106 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1 amd64 11.2.0-14 [26.1 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1 amd64 11.2.0-14 [9044 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6 amd64 11.2.0-14 [2050 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0 amd64 11.2.0-14 [886 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0 amd64 11.2.0-14 [2016 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1 amd64 11.2.0-14 [835 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libquadmath0 amd64 11.2.0-14 [144 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-11-dev amd64 11.2.0-14 [2356 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11 amd64 11.2.0-14 [18.1 MB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-11 amd64 11.2.0-14 [9151 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-base amd64 11.2.0-14 [207 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6 amd64 11.2.0-14 [577 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1 amd64 11.2.0-14 [42.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 36.6 MB in 0s (109 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10576 files and directories currently installed.) Preparing to unpack .../00-libcc1-0_11.2.0-14_amd64.deb ... Unpacking libcc1-0:amd64 (11.2.0-14) over (11.2.0-13) ... Preparing to unpack .../01-libgomp1_11.2.0-14_amd64.deb ... Unpacking libgomp1:amd64 (11.2.0-14) over (11.2.0-13) ... Preparing to unpack .../02-libitm1_11.2.0-14_amd64.deb ... Unpacking libitm1:amd64 (11.2.0-14) over (11.2.0-13) ... 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Unpacking libstdc++6:amd64 (11.2.0-14) over (11.2.0-13) ... Setting up libstdc++6:amd64 (11.2.0-14) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10576 files and directories currently installed.) Preparing to unpack .../libgcc-s1_11.2.0-14_amd64.deb ... Unpacking libgcc-s1:amd64 (11.2.0-14) over (11.2.0-13) ... Setting up libgcc-s1:amd64 (11.2.0-14) ... Setting up cpp-11 (11.2.0-14) ... Setting up libgomp1:amd64 (11.2.0-14) ... Setting up libasan6:amd64 (11.2.0-14) ... Setting up libquadmath0:amd64 (11.2.0-14) ... Setting up libatomic1:amd64 (11.2.0-14) ... Setting up libubsan1:amd64 (11.2.0-14) ... Setting up libcc1-0:amd64 (11.2.0-14) ... Setting up liblsan0:amd64 (11.2.0-14) ... Setting up libitm1:amd64 (11.2.0-14) ... Setting up libtsan0:amd64 (11.2.0-14) ... Setting up libgcc-11-dev:amd64 (11.2.0-14) ... Setting up gcc-11 (11.2.0-14) ... Processing triggers for libc-bin (2.33-2) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'microbiomeutil' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/microbiomeutil.git Please use: git clone https://salsa.debian.org/med-team/microbiomeutil.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1623 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main microbiomeutil 20101212+dfsg1-5 (dsc) [2409 B] Get:2 http://debian.oregonstate.edu/debian unstable/main microbiomeutil 20101212+dfsg1-5 (tar) [1610 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main microbiomeutil 20101212+dfsg1-5 (diff) [10.4 kB] Fetched 1623 kB in 0s (47.1 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/microbiomeutil-qKoITT/microbiomeutil-20101212+dfsg1' with '<>' I: NOTICE: Log filtering will replace 'build/microbiomeutil-qKoITT' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), cdbfasta, ncbi-blast+-legacy, debhelper, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf Filtered Build-Depends: debhelper-compat (= 13), cdbfasta, ncbi-blast+-legacy, debhelper, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [426 B] Get:5 copy:/<>/apt_archive ./ Packages [513 B] Fetched 1896 B in 0s (74.4 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils build-essential cdbfasta cpp-11-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-11 g++-11-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-11-arm-linux-gnueabihf gcc-11-arm-linux-gnueabihf-base gcc-11-base:armhf gcc-11-cross-base gcc-9-base:armhf gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libasan6-armhf-cross libatomic1:armhf libatomic1-armhf-cross libc6:armhf libc6-armhf-cross libc6-dev libc6-dev:armhf libc6-dev-armhf-cross libcom-err2:armhf libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:armhf libcrypt1:armhf libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libexpat1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev-armhf-cross libgcc-9-dev:armhf libgcc-s1:armhf libgcc-s1-armhf-cross libgclib3 libgomp1:armhf libgomp1-armhf-cross libgssapi-krb5-2:armhf libicu67 libio-string-perl libk5crypto3:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5support0:armhf liblmdb0 liblocale-gettext-perl libmagic-mgc libmagic1 libmbedcrypto3 libmbedtls12 libmbedx509-0 libmpdec3 libnsl-dev libnsl-dev:armhf libnsl2:armhf libperl5.32 libpipeline1 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libsigsegv2 libsqlite3-0 libssl1.1:armhf libstdc++-11-dev libstdc++-11-dev-armhf-cross libstdc++-9-dev:armhf libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtirpc-dev libtirpc-dev:armhf libtirpc3:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db media-types ncbi-blast+ ncbi-blast+-legacy ncbi-data perl perl-modules-5.32 po-debconf python3 python3-minimal python3.9 python3.9-minimal rpcsvc-proto sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-11-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-11-multilib gcc-11-doc manpages-dev flex bison gdb-arm-linux-gnueabihf gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armhf libc-l10n:armhf locales:armhf libnss-nis:armhf libnss-nisplus:armhf glibc-doc manpages-dev:armhf gnupg git bzr krb5-doc:armhf krb5-user:armhf libstdc++-11-doc libstdc++-9-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl python3-doc python3-tk python3-venv python3.9-venv python3.9-doc binfmt-support Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx libidn2-0:armhf libfile-fcntllock-perl libarchive-cpio-perl krb5-locales:armhf ca-certificates libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils build-essential cdbfasta cpp-11-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-11 g++-11-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-11-arm-linux-gnueabihf gcc-11-arm-linux-gnueabihf-base gcc-11-base:armhf gcc-11-cross-base gcc-9-base:armhf gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libasan6-armhf-cross libatomic1:armhf libatomic1-armhf-cross libc6:armhf libc6-armhf-cross libc6-dev libc6-dev:armhf libc6-dev-armhf-cross libcom-err2:armhf libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:armhf libcrypt1:armhf libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libexpat1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev-armhf-cross libgcc-9-dev:armhf libgcc-s1:armhf libgcc-s1-armhf-cross libgclib3 libgomp1:armhf libgomp1-armhf-cross libgssapi-krb5-2:armhf libicu67 libio-string-perl libk5crypto3:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5support0:armhf liblmdb0 liblocale-gettext-perl libmagic-mgc libmagic1 libmbedcrypto3 libmbedtls12 libmbedx509-0 libmpdec3 libnsl-dev libnsl-dev:armhf libnsl2:armhf libperl5.32 libpipeline1 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libsigsegv2 libsqlite3-0 libssl1.1:armhf libstdc++-11-dev libstdc++-11-dev-armhf-cross libstdc++-9-dev:armhf libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtirpc-dev libtirpc-dev:armhf libtirpc3:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db media-types ncbi-blast+ ncbi-blast+-legacy ncbi-data perl perl-modules-5.32 po-debconf python3 python3-minimal python3.9 python3.9-minimal rpcsvc-proto sbuild-build-depends-main-dummy:armhf sensible-utils ucf 0 upgraded, 129 newly installed, 0 to remove and 0 not upgraded. Need to get 252 MB of archives. After this operation, 928 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [944 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.32 all 5.32.1-6 [2824 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.32 amd64 5.32.1-6 [4106 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.32.1-6 [293 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4+b1 [19.0 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.9-minimal amd64 3.9.9-4 [805 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.4.2-1 [104 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 python3.9-minimal amd64 3.9.9-4 [1925 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 python3-minimal amd64 3.9.8-1 [38.5 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 media-types all 4.0.0 [30.3 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libmpdec3 amd64 2.5.1-2 [87.8 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.37.2-1 [820 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.9-stdlib amd64 3.9.9-4 [1680 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 python3.9 amd64 3.9.9-4 [484 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3-stdlib amd64 3.9.8-1 [21.6 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 python3 amd64 3.9.8-1 [38.1 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main armhf gcc-9-base armhf 9.4.0-4+b1 [200 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.41-2 [295 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.41-2 [129 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.41-2 [66.9 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.21-4 [175 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-8 [936 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.37.2-6 [143 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.5-1 [37.6 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.4-4 [1354 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-5 [204 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.71-2 [343 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.5-1.1 [823 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.21-4 [510 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabihf amd64 2.37.50.20220106-2 [3154 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.27-1 [104 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.3.2-2 [190 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 rpcsvc-proto amd64 1.4.2-4 [63.1 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.33-2 [2273 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-11-dev amd64 11.2.0-14 [1979 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 g++-11 amd64 11.2.0-14 [10.2 MB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:11.2.0-2 [1636 B] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.21.1 [1568 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.21.1 [2171 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.9 [7704 B] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libgclib3 amd64 0.12.7+ds-4 [150 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 cdbfasta amd64 1.00+git20181005.014498c+dfsg-4 [129 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-arm-linux-gnueabihf-base amd64 11.2.0-9cross1 [205 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-11-arm-linux-gnueabihf amd64 11.2.0-9cross1 [48.3 MB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabihf amd64 4:11.2.0-2 [17.0 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.18+nmu2 [31.7 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-cross-base all 11.2.0-9cross1 [201 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armhf-cross all 2.33-1cross1 [1110 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-armhf-cross all 11.2.0-9cross1 [36.4 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armhf-cross all 11.2.0-9cross1 [86.5 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armhf-cross all 11.2.0-9cross1 [6676 B] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-armhf-cross all 11.2.0-9cross1 [1963 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armhf-cross all 11.2.0-9cross1 [438 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armhf-cross all 11.2.0-9cross1 [797 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-11-dev-armhf-cross all 11.2.0-9cross1 [711 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-arm-linux-gnueabihf amd64 11.2.0-9cross1 [54.8 MB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabihf amd64 4:11.2.0-2 [1460 B] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armhf-cross all 5.15.5-1cross1 [1541 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armhf-cross all 2.33-1cross1 [1773 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-11-dev-armhf-cross all 11.2.0-9cross1 [1960 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 g++-11-arm-linux-gnueabihf amd64 11.2.0-9cross1 [52.4 MB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabihf amd64 4:11.2.0-2 [1180 B] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.12+dfsg-5+b1 [701 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2+b1 [337 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1.1 [19.0 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu2 [30.6 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.18+nmu2 [40.9 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armhf all 12.9 [6708 B] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.6 [193 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-15 [513 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.13.0-1 [15.8 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.186-1 [179 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.21-4 [1311 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.6 [1054 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main armhf gcc-11-base armhf 11.2.0-14 [207 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-s1 armhf 11.2.0-14 [36.4 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main armhf libc6 armhf 2.33-2 [2350 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main armhf libasan5 armhf 9.4.0-4+b1 [2777 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main armhf libatomic1 armhf 11.2.0-14 [6904 B] Get:103 http://debian.oregonstate.edu/debian unstable/main armhf linux-libc-dev armhf 5.15.5-2 [1422 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main armhf libcrypt1 armhf 1:4.4.27-1 [95.8 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main armhf libcrypt-dev armhf 1:4.4.27-1 [111 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main armhf libcom-err2 armhf 1.46.5-2 [74.8 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main armhf libkrb5support0 armhf 1.18.3-7 [62.5 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main armhf libk5crypto3 armhf 1.18.3-7 [110 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main armhf libkeyutils1 armhf 1.6.1-2 [14.4 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main armhf libssl1.1 armhf 1.1.1m-1 [1308 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main armhf libkrb5-3 armhf 1.18.3-7 [319 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main armhf libgssapi-krb5-2 armhf 1.18.3-7 [143 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main armhf libtirpc3 armhf 1.3.2-2 [72.7 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main armhf libnsl2 armhf 1.3.0-2 [33.9 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main armhf libtirpc-dev armhf 1.3.2-2 [182 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main armhf libnsl-dev armhf 1.3.0-2 [62.1 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main armhf libc6-dev armhf 2.33-2 [1805 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main armhf libgomp1 armhf 11.2.0-14 [88.7 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++6 armhf 11.2.0-14 [480 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main armhf libubsan1 armhf 11.2.0-14 [797 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-9-dev armhf 9.4.0-4+b1 [660 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main amd64 liblmdb0 amd64 0.9.24-1 [45.0 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main amd64 libmbedcrypto3 amd64 2.16.11-0.3 [222 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main amd64 libmbedx509-0 amd64 2.16.11-0.3 [112 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main amd64 libmbedtls12 amd64 2.16.11-0.3 [141 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++-9-dev armhf 9.4.0-4+b1 [1774 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main amd64 ncbi-data all 6.1.20170106+dfsg1-9 [3556 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main amd64 ncbi-blast+ amd64 2.12.0+ds-2 [11.9 MB] Get:129 http://debian.oregonstate.edu/debian unstable/main amd64 ncbi-blast+-legacy all 2.12.0+ds-2 [13.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 252 MB in 2s (126 MB/s) Selecting previously unselected package perl-modules-5.32. (Reading database ... 10576 files and directories currently installed.) Preparing to unpack .../0-perl-modules-5.32_5.32.1-6_all.deb ... Unpacking perl-modules-5.32 (5.32.1-6) ... Selecting previously unselected package libperl5.32:amd64. Preparing to unpack .../1-libperl5.32_5.32.1-6_amd64.deb ... Unpacking libperl5.32:amd64 (5.32.1-6) ... Selecting previously unselected package perl. Preparing to unpack .../2-perl_5.32.1-6_amd64.deb ... Unpacking perl (5.32.1-6) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../3-liblocale-gettext-perl_1.07-4+b1_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b1) ... Selecting previously unselected package libpython3.9-minimal:amd64. Preparing to unpack .../4-libpython3.9-minimal_3.9.9-4_amd64.deb ... Unpacking libpython3.9-minimal:amd64 (3.9.9-4) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../5-libexpat1_2.4.2-1_amd64.deb ... Unpacking libexpat1:amd64 (2.4.2-1) ... Selecting previously unselected package python3.9-minimal. Preparing to unpack .../6-python3.9-minimal_3.9.9-4_amd64.deb ... Unpacking python3.9-minimal (3.9.9-4) ... Setting up libpython3.9-minimal:amd64 (3.9.9-4) ... Setting up libexpat1:amd64 (2.4.2-1) ... Setting up python3.9-minimal (3.9.9-4) ... Selecting previously unselected package python3-minimal. (Reading database ... 12841 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.9.8-1_amd64.deb ... Unpacking python3-minimal (3.9.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_4.0.0_all.deb ... Unpacking media-types (4.0.0) ... Selecting previously unselected package libmpdec3:amd64. Preparing to unpack .../2-libmpdec3_2.5.1-2_amd64.deb ... Unpacking libmpdec3:amd64 (2.5.1-2) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../3-libsqlite3-0_3.37.2-1_amd64.deb ... 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Selecting previously unselected package libc6-armhf-cross. Preparing to unpack .../038-libc6-armhf-cross_2.33-1cross1_all.deb ... Unpacking libc6-armhf-cross (2.33-1cross1) ... Selecting previously unselected package libgcc-s1-armhf-cross. Preparing to unpack .../039-libgcc-s1-armhf-cross_11.2.0-9cross1_all.deb ... Unpacking libgcc-s1-armhf-cross (11.2.0-9cross1) ... Selecting previously unselected package libgomp1-armhf-cross. Preparing to unpack .../040-libgomp1-armhf-cross_11.2.0-9cross1_all.deb ... Unpacking libgomp1-armhf-cross (11.2.0-9cross1) ... Selecting previously unselected package libatomic1-armhf-cross. Preparing to unpack .../041-libatomic1-armhf-cross_11.2.0-9cross1_all.deb ... Unpacking libatomic1-armhf-cross (11.2.0-9cross1) ... Selecting previously unselected package libasan6-armhf-cross. Preparing to unpack .../042-libasan6-armhf-cross_11.2.0-9cross1_all.deb ... Unpacking libasan6-armhf-cross (11.2.0-9cross1) ... 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Unpacking libstdc++-9-dev:armhf (9.4.0-4+b1) ... Selecting previously unselected package ncbi-data. Preparing to unpack .../111-ncbi-data_6.1.20170106+dfsg1-9_all.deb ... Unpacking ncbi-data (6.1.20170106+dfsg1-9) ... Selecting previously unselected package ncbi-blast+. Preparing to unpack .../112-ncbi-blast+_2.12.0+ds-2_amd64.deb ... Unpacking ncbi-blast+ (2.12.0+ds-2) ... Selecting previously unselected package ncbi-blast+-legacy. Preparing to unpack .../113-ncbi-blast+-legacy_2.12.0+ds-2_all.deb ... Unpacking ncbi-blast+-legacy (2.12.0+ds-2) ... Selecting previously unselected package sbuild-build-depends-main-dummy:armhf. Preparing to unpack .../114-sbuild-build-depends-main-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up media-types (4.0.0) ... Setting up libpipeline1:amd64 (1.5.5-1) ... Setting up liblmdb0:amd64 (0.9.24-1) ... Setting up ncbi-data (6.1.20170106+dfsg1-9) ... Setting up gcc-11-base:armhf (11.2.0-14) ... Setting up libc6-armhf-cross (2.33-1cross1) ... Setting up bsdextrautils (2.37.2-6) ... Setting up libicu67:amd64 (67.1-7) ... Setting up libmagic-mgc (1:5.41-2) ... Setting up perl-modules-5.32 (5.32.1-6) ... Setting up libsqlite3-0:amd64 (3.37.2-1) ... Setting up libmagic1:amd64 (1:5.41-2) ... Setting up linux-libc-dev:armhf (5.15.5-2) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.41-2) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up cross-config (2.6.18+nmu2) ... Setting up libtirpc-dev:amd64 (1.3.2-2) ... Setting up rpcsvc-proto (1.4.2-4) ... Setting up gcc-11-arm-linux-gnueabihf-base:amd64 (11.2.0-9cross1) ... Setting up libsigsegv2:amd64 (2.13-1) ... Setting up linux-libc-dev-armhf-cross (5.15.5-1cross1) ... Setting up autopoint (0.21-4) ... Setting up libperl5.32:amd64 (5.32.1-6) ... Setting up gcc-11-cross-base (11.2.0-9cross1) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up sensible-utils (0.0.17) ... Setting up libcrypt-dev:amd64 (1:4.4.27-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libmpdec3:amd64 (2.5.1-2) ... Setting up libmbedcrypto3:amd64 (2.16.11-0.3) ... Setting up libc6-dev:amd64 (2.33-2) ... Setting up binutils-arm-linux-gnueabihf (2.37.50.20220106-2) ... Setting up libelf1:amd64 (0.186-1) ... Setting up libxml2:amd64 (2.9.12+dfsg-5+b1) ... Setting up liblocale-gettext-perl (1.07-4+b1) ... Setting up libpython3.9-stdlib:amd64 (3.9.9-4) ... Setting up libpython3-stdlib:amd64 (3.9.8-1) ... Setting up gcc-9-base:armhf (9.4.0-4+b1) ... Setting up cpp-11-arm-linux-gnueabihf (11.2.0-9cross1) ... Setting up libgclib3:amd64 (0.12.7+ds-4) ... Setting up libgomp1-armhf-cross (11.2.0-9cross1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libmbedx509-0:amd64 (2.16.11-0.3) ... Setting up libgcc-s1-armhf-cross (11.2.0-9cross1) ... Setting up libc6-dev-armhf-cross (2.33-1cross1) ... Setting up libmbedtls12:amd64 (2.16.11-0.3) ... Setting up m4 (1.4.18-5) ... Setting up libatomic1-armhf-cross (11.2.0-9cross1) ... Setting up cdbfasta (1.00+git20181005.014498c+dfsg-4) ... Setting up perl (5.32.1-6) ... Setting up libstdc++6-armhf-cross (11.2.0-9cross1) ... Setting up libasan6-armhf-cross (11.2.0-9cross1) ... Setting up libubsan1-armhf-cross (11.2.0-9cross1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.21.1) ... Setting up autoconf (2.71-2) ... Setting up libstdc++-11-dev:amd64 (11.2.0-14) ... Setting up dwz (0.14-1) ... Setting up groff-base (1.22.4-8) ... Setting up libsub-override-perl (0.09-2) ... Setting up cpp-arm-linux-gnueabihf (4:11.2.0-2) ... Setting up python3.9 (3.9.9-4) ... Setting up automake (1:1.16.5-1.1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up g++-11 (11.2.0-14) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.6) ... Setting up libxml-namespacesupport-perl (1.12-1.1) ... Setting up python3 (3.9.8-1) ... Setting up man-db (2.9.4-4) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.21.1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up ncbi-blast+ (2.12.0+ds-2) ... Setting up dh-autoreconf (20) ... Setting up libxml-sax-base-perl (1.09-1.1) ... Setting up libio-string-perl (1.08-3.1) ... Setting up libgcc-11-dev-armhf-cross (11.2.0-9cross1) ... Setting up libstdc++-11-dev-armhf-cross (11.2.0-9cross1) ... Setting up g++ (4:11.2.0-2) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up build-essential (12.9) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up gcc-11-arm-linux-gnueabihf (11.2.0-9cross1) ... Setting up gcc-arm-linux-gnueabihf (4:11.2.0-2) ... Setting up libfile-stripnondeterminism-perl (1.13.0-1) ... Setting up ncbi-blast+-legacy (2.12.0+ds-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0134+dfsg-2+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.13.0-1) ... Setting up g++-11-arm-linux-gnueabihf (11.2.0-9cross1) ... Setting up g++-arm-linux-gnueabihf (4:11.2.0-2) ... Setting up debhelper (13.6) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1.1) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu2) ... Setting up dpkg-cross (2.6.18+nmu2) ... Setting up crossbuild-essential-armhf (12.9) ... Setting up libgcc-s1:armhf (11.2.0-14) ... Setting up libc6:armhf (2.33-2) ... Setting up libstdc++6:armhf (11.2.0-14) ... Setting up libkeyutils1:armhf (1.6.1-2) ... Setting up libssl1.1:armhf (1.1.1m-1) ... Setting up libcrypt1:armhf (1:4.4.27-1) ... Setting up libcom-err2:armhf (1.46.5-2) ... Setting up libgomp1:armhf (11.2.0-14) ... Setting up libkrb5support0:armhf (1.18.3-7) ... Setting up libasan5:armhf (9.4.0-4+b1) ... Setting up libatomic1:armhf (11.2.0-14) ... Setting up libk5crypto3:armhf (1.18.3-7) ... Setting up libubsan1:armhf (11.2.0-14) ... Setting up libcrypt-dev:armhf (1:4.4.27-1) ... Setting up libkrb5-3:armhf (1.18.3-7) ... Setting up libgcc-9-dev:armhf (9.4.0-4+b1) ... Setting up libgssapi-krb5-2:armhf (1.18.3-7) ... Setting up libtirpc3:armhf (1.3.2-2) ... Setting up libtirpc-dev:armhf (1.3.2-2) ... Setting up libnsl2:armhf (1.3.0-2) ... Setting up libnsl-dev:armhf (1.3.0-2) ... Setting up libc6-dev:armhf (2.33-2) ... Setting up libstdc++-9-dev:armhf (9.4.0-4+b1) ... Setting up sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.33-2) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-17-amd64 #1 SMP Debian 4.19.194-3 (2021-07-18) amd64 (x86_64) Toolchain package versions: binutils_2.37.50.20220106-2 dpkg-dev_1.21.1 g++-11_11.2.0-14 gcc-11_11.2.0-14 libc6-dev_2.33-2 libstdc++-11-dev_11.2.0-14 libstdc++-11-dev-armhf-cross_11.2.0-9cross1 libstdc++-9-dev_9.4.0-4+b1 libstdc++6_11.2.0-14 libstdc++6-armhf-cross_11.2.0-9cross1 linux-libc-dev_5.15.5-2 Package versions: adduser_3.118 apt_2.3.14 autoconf_2.71-2 automake_1:1.16.5-1.1 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_12 base-passwd_3.5.52 bash_5.1-6 binutils_2.37.50.20220106-2 binutils-arm-linux-gnueabihf_2.37.50.20220106-2 binutils-common_2.37.50.20220106-2 binutils-x86-64-linux-gnu_2.37.50.20220106-2 bsdextrautils_2.37.2-6 bsdutils_1:2.37.2-6 build-essential_12.9 bzip2_1.0.8-5 cdbfasta_1.00+git20181005.014498c+dfsg-4 coreutils_8.32-4.1 cpp_4:11.2.0-2 cpp-11_11.2.0-14 cpp-11-arm-linux-gnueabihf_11.2.0-9cross1 cpp-8_8.4.0-7 cpp-arm-linux-gnueabihf_4:11.2.0-2 cross-config_2.6.18+nmu2 crossbuild-essential-armhf_12.9 dash_0.5.11+git20210903+057cd650a4ed-3 debconf_1.5.79 debhelper_13.6 debian-archive-keyring_2021.1.1 debianutils_5.5-1 dh-autoreconf_20 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.7-5 dpkg_1.21.1 dpkg-cross_2.6.18+nmu2 dpkg-dev_1.21.1 dwz_0.14-1 e2fsprogs_1.46.5-2 fakeroot_1.26-1.2 fdisk_2.37.2-6 file_1:5.41-2 findutils_4.8.0-1 g++_4:11.2.0-2 g++-11_11.2.0-14 g++-11-arm-linux-gnueabihf_11.2.0-9cross1 g++-arm-linux-gnueabihf_4:11.2.0-2 gcc_4:11.2.0-2 gcc-10-base_10.3.0-13 gcc-11_11.2.0-14 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libconfig-inifiles-perl_3.000003-1 libcrypt-dev_1:4.4.27-1 libcrypt1_1:4.4.27-1 libctf-nobfd0_2.37.50.20220106-2 libctf0_2.37.50.20220106-2 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.261 libdebhelper-perl_13.6 libdebian-dpkgcross-perl_2.6.18+nmu2 libdpkg-perl_1.21.1 libelf1_0.186-1 libexpat1_2.4.2-1 libext2fs2_1.46.5-2 libfakeroot_1.26-1.2 libfdisk1_2.37.2-6 libffi6_3.2.1-9 libffi8_3.4.2-3 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.13.0-1 libfile-which-perl_1.23-1 libgcc-11-dev_11.2.0-14 libgcc-11-dev-armhf-cross_11.2.0-9cross1 libgcc-9-dev_9.4.0-4+b1 libgcc-s1_11.2.0-14 libgcc-s1-armhf-cross_11.2.0-9cross1 libgclib3_0.12.7+ds-4 libgcrypt20_1.9.4-5 libgdbm-compat4_1.22-1 libgdbm6_1.22-1 libgmp10_2:6.2.1+dfsg-3 libgnutls30_3.7.2-5 libgomp1_11.2.0-14 libgomp1-armhf-cross_11.2.0-9cross1 libgpg-error0_1.43-1 libgssapi-krb5-2_1.18.3-7 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.7.3-1 libicu67_67.1-7 libidn2-0_2.3.2-2 libio-string-perl_1.08-3.1 libisl19_0.20-2 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man-db_2.9.4-4 mawk_1.3.4.20200120-2 media-types_4.0.0 mount_2.37.2-6 ncbi-blast+_2.12.0+ds-2 ncbi-blast+-legacy_2.12.0+ds-2 ncbi-data_6.1.20170106+dfsg1-9 ncurses-base_6.3-1 ncurses-bin_6.3-1 passwd_1:4.8.1-2 patch_2.7.6-7 perl_5.32.1-6 perl-base_5.32.1-6 perl-modules-5.28_5.28.1-6 perl-modules-5.32_5.32.1-6 po-debconf_1.0.21+nmu1 python3_3.9.8-1 python3-minimal_3.9.8-1 python3.9_3.9.9-4 python3.9-minimal_3.9.9-4 readline-common_8.1.2-1 rpcsvc-proto_1.4.2-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.01-1 tar_1.34+dfsg-1 tzdata_2021e-1 ucf_3.0043 util-linux_2.37.2-6 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: microbiomeutil Binary: microbiomeutil, chimeraslayer, nast-ier, wigeon, microbiomeutil-data Architecture: any all Version: 20101212+dfsg1-5 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Andreas Tille Homepage: http://microbiomeutil.sourceforge.net/ Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/microbiomeutil Vcs-Git: https://salsa.debian.org/med-team/microbiomeutil.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cdbfasta, ncbi-blast+-legacy, debhelper Package-List: chimeraslayer deb science optional arch=all microbiomeutil deb science optional arch=all microbiomeutil-data deb science optional arch=all nast-ier deb science optional arch=any wigeon deb science optional arch=all Checksums-Sha1: 514fd1683e42cf11b20fe3b5c78a63a1c67c1b58 1610352 microbiomeutil_20101212+dfsg1.orig.tar.xz 0fbbf9f73634d17519437cfad6d2a4db5bb5d2c8 10428 microbiomeutil_20101212+dfsg1-5.debian.tar.xz Checksums-Sha256: f6e75eb1ccbaca07c862f5e548850bb87c37279678250cd36f5804d673bbd56c 1610352 microbiomeutil_20101212+dfsg1.orig.tar.xz f518be0f2368f906c4e75f45e1ac1bfa2a5f2827b4658638bf4485f917d8d26f 10428 microbiomeutil_20101212+dfsg1-5.debian.tar.xz Files: c77392b26d155fcfccee367dcea6c53d 1610352 microbiomeutil_20101212+dfsg1.orig.tar.xz ebfa072b03f69c812c763b14e41941cd 10428 microbiomeutil_20101212+dfsg1-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmHccc0RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEy/RAAlS39x/trl/o1K1hO0xfiaGpPErsu4opC byy+d+qpZVDhpF4uTFEgXcaqxRBF39Yh1n9h5CR1X+/kHGxZUF+L5PS+TDTvcz+j 1/eWpVF4KB5OK1e+yUjXv17G6UQRZVetV9o0vP70r1KmoDU0M4nGfYXBCByn6OJO fis/OI/rDeF4tk7TTkJVZ4xwhas6Z4JMk3z/Yw6eRmqctoxpHlD7oY4Eadb02k0W Jy6L7FVj1wFvyyijsN3SdRNjMb6JI13HF0YYHXAUkoF22jRDPJmOgJSZqKL89UQr 1GzKvU6KQ7o83f31WxycWeIWdWwKSIgeQUBpSGYIINbUx5dPRT2ZIyBt08z3PlYK Lcbipw2lWp3jDVkxku3iZ4DAQJR4Wf+pOXzkoiG5erfQxHeUpYST4T34/lYlfMiY 3dYqdJA/Nvb9CPYQ3tHwV715Vv6klRii76sAqfVZBLoppOqEH46cIZLxYoGUZsmZ VODv+dbWjEQ8YARvqUIZoJzkhTnjDmAGp8dV+vgO98bYq7Zc5TqdIc6oVJVLys8V VTKQBgGYBSXEzrTL9lYODnYn90M+vdVmSLUOSaylsJ8MB6ztvBNhhLuWFIAY0whc pixuPokntAWWhI5LEiyynDAG5ysYxrQyZaynDT+zuxGtvkvz6XWdmQTqUxbS8YI2 rdtNQFvuJfI= =NN34 -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.1jEY_oMj/trustedkeys.kbx': General error gpgv: Signature made Mon Jan 10 17:50:05 2022 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify signature ./microbiomeutil_20101212+dfsg1-5.dsc dpkg-source: info: extracting microbiomeutil in /<> dpkg-source: info: unpacking microbiomeutil_20101212+dfsg1.orig.tar.xz dpkg-source: info: unpacking microbiomeutil_20101212+dfsg1-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_perl_interpreter.patch dpkg-source: info: applying find_relocated_resources.patch dpkg-source: info: applying find_relocated_libraries.patch dpkg-source: info: applying hardening.patch dpkg-source: info: applying enable_tests_in_local_dir.patch dpkg-source: info: applying cross.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-e0eaef7d-3855-410d-8387-e3ae5ecb85da SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarmhf -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package microbiomeutil dpkg-buildpackage: info: source version 20101212+dfsg1-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean make -j1 clean make[2]: Entering directory '/<>' X=`pwd`; \ for i in NAST-iEr ChimeraSlayer WigeoN RESOURCES; \ do echo '<<<' $i '>>>'; cd $X/$i; make clean; done <<< NAST-iEr >>> make[3]: Entering directory '/<>/NAST-iEr' cd ./sample_data; make clean make[4]: Entering directory '/<>/NAST-iEr/sample_data' rm -f tmp.* make[4]: Leaving directory '/<>/NAST-iEr/sample_data' rm -f NAST-iEr make[3]: Leaving directory '/<>/NAST-iEr' <<< ChimeraSlayer >>> make[3]: Entering directory '/<>/ChimeraSlayer' cd ./sample_data; make clean make[4]: Entering directory '/<>/ChimeraSlayer/sample_data' rm -f chims.NAST.* rm -f sample_DB.NAST.cidx rm -f sample_DB.fasta.* rm -f tmp.* rm -f formatdb.log make[4]: Leaving directory '/<>/ChimeraSlayer/sample_data' make[3]: Leaving directory '/<>/ChimeraSlayer' <<< WigeoN >>> make[3]: Entering directory '/<>/WigeoN' cd ./sample_data; make clean make[4]: Entering directory '/<>/WigeoN/sample_data' rm -f tmp.* rm -f chims.NAST.* make[4]: Leaving directory '/<>/WigeoN/sample_data' make[3]: Leaving directory '/<>/WigeoN' <<< RESOURCES >>> make[3]: Entering directory '/<>/RESOURCES' rm -f *fasta.* make[3]: Leaving directory '/<>/RESOURCES' make[2]: Leaving directory '/<>' rm -f RESOURCES/rRNA16S.gold.fasta.n* RESOURCES/*.cidx rm -f formatdb.log make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabihf-pkg-config CXX=arm-linux-gnueabihf-g\+\+ CC=arm-linux-gnueabihf-gcc make[2]: Entering directory '/<>' X=`pwd`; \ for i in NAST-iEr ChimeraSlayer WigeoN RESOURCES; \ do echo '<<<' $i '>>>'; cd $X/$i; make all; done <<< NAST-iEr >>> make[3]: Entering directory '/<>/NAST-iEr' arm-linux-gnueabihf-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now NAST-iEr.c -o NAST-iEr NAST-iEr.c: In function ‘main’: NAST-iEr.c:106:15: warning: implicit declaration of function ‘isprint’ [-Wimplicit-function-declaration] 106 | if (isprint (optopt)) { | ^~~~~~~ NAST-iEr.c:5:1: note: include ‘’ or provide a declaration of ‘isprint’ 4 | #include +++ |+#include 5 | make[3]: Leaving directory '/<>/NAST-iEr' <<< ChimeraSlayer >>> make[3]: Entering directory '/<>/ChimeraSlayer' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/ChimeraSlayer' <<< WigeoN >>> make[3]: Entering directory '/<>/WigeoN' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/WigeoN' <<< RESOURCES >>> make[3]: Entering directory '/<>/RESOURCES' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/RESOURCES' make[2]: Leaving directory '/<>' #Pre-make indexes for ChimeraSlayer, otherwise it tries to write them #to the non-writeable dir on first run and blows up formatdb -p F -i RESOURCES/rRNA16S.gold.fasta 2>/dev/null Building a new DB, current time: 01/13/2022 09:14:51 New DB name: /<>/RESOURCES/rRNA16S.gold.fasta New DB title: RESOURCES/rRNA16S.gold.fasta Sequence type: Nucleotide Keep MBits: T Maximum file size: 1000000000B Adding sequences from FASTA; added 5181 sequences in 0.328825 seconds. cdbfasta -C RESOURCES/rRNA16S.gold.NAST_ALIGNED.fasta 5181 entries from file RESOURCES/rRNA16S.gold.NAST_ALIGNED.fasta were indexed in file RESOURCES/rRNA16S.gold.NAST_ALIGNED.fasta.cidx make[1]: Leaving directory '/<>' dh: command-omitted: The call to "debian/rules override_dh_auto_test" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install -a debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install -XMakefile -Xsample_data -XLICENSE -XNAST-iEr.c find debian -name '*.pl' -o -name '*.pm' | xargs sed -i 's|/usr/bin/env perl|/usr/bin/perl|g' make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a debian/rules override_dh_installexamples make[1]: Entering directory '/<>' dh_installexamples for mod in ChimeraSlayer NAST-iEr WigeoN ; do \ mkdir -p /<>/debian/microbiomeutil-data/usr/share/doc/microbiomeutil-data/examples/${mod} ; \ cp -a ${mod}/sample_data/* /<>/debian/microbiomeutil-data/usr/share/doc/microbiomeutil-data/examples/${mod} ; \ sed -i -e "s?../${mod}?${mod}?" \ -e "s?^.*\(/util/show_malign_no_gap.pl\)?/usr/lib/NAST-iEr\1?" \ -e "s?^.*\(/run_NAST-iEr.pl\)?/usr/lib/NAST-iEr\1?" \ -e "s?^.*\(ChimeraSlayer.pl\)?/usr/lib/ChimeraSlayer/\1?" \ -e "s?^.*\(/run_WigeoN.pl\)?/usr/lib/WigeoN\1?" \ /<>/debian/microbiomeutil-data/usr/share/doc/microbiomeutil-data/examples/${mod}/runMe.sh ; \ done sed -i '1i #!/bin/sh' /<>/debian/microbiomeutil-data/usr/share/doc/microbiomeutil-data/examples/WigeoN/runMe.sh make[1]: Leaving directory '/<>' dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a debian/rules override_dh_fixperms make[1]: Entering directory '/<>' dh_fixperms find debian -type f -name '*.pm' -print0 | xargs -0r chmod a-x find debian -type f -name 'genus_counter.pl' -print0 | xargs -0r chmod a+x make[1]: Leaving directory '/<>' dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: package nast-ier: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package nast-ier: substitution variable ${perl:Depends} unused, but is defined dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'nast-ier' in '../nast-ier_20101212+dfsg1-5_armhf.deb'. dpkg-deb: building package 'nast-ier-dbgsym' in '../nast-ier-dbgsym_20101212+dfsg1-5_armhf.deb'. dpkg-genbuildinfo --build=any -O../microbiomeutil_20101212+dfsg1-5_armhf.buildinfo dpkg-genchanges --build=any -O../microbiomeutil_20101212+dfsg1-5_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2022-01-13T09:14:56Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ microbiomeutil_20101212+dfsg1-5_armhf.changes: ---------------------------------------------- Format: 1.8 Date: Mon, 10 Jan 2022 17:29:54 +0100 Source: microbiomeutil Binary: nast-ier nast-ier-dbgsym Built-For-Profiles: cross nocheck Architecture: armhf Version: 20101212+dfsg1-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: nast-ier - NAST-based DNA alignment tool Closes: 1003411 Changes: microbiomeutil (20101212+dfsg1-5) unstable; urgency=medium . [ Helmut Grohne ] * Do not hard code the build architecture compiler Closes: #1003411 . [ Andreas Tille ] * Standards-Version: 4.6.0 (routine-update) * Add missing build dependency on dh addon. * Fix typo in debian/rules rules: override_dh_auto_build => override_dh_auto_build, override_dh_fixperms => override_dh_fixperms * Apply multi-arch hints. + microbiomeutil-data: Add Multi-Arch: foreign. 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+------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: microbiomeutil Binary: nast-ier nast-ier-dbgsym Architecture: armhf Version: 20101212+dfsg1-5 Checksums-Md5: bcad2d95e49f0682d56cfeb0d2e1bd20 14064 nast-ier-dbgsym_20101212+dfsg1-5_armhf.deb 06e18e4310986c9273714dc2178bd0a8 20564 nast-ier_20101212+dfsg1-5_armhf.deb Checksums-Sha1: ab24a8dc583dce689a3266058c873d102ea2f8ea 14064 nast-ier-dbgsym_20101212+dfsg1-5_armhf.deb 09786cc8a7368b535682f1354218b65ee9228a6d 20564 nast-ier_20101212+dfsg1-5_armhf.deb Checksums-Sha256: a8012314ecbfbffe6b6d9a905c2b18764e02cb1c6345bf8242b36dbe284f356f 14064 nast-ier-dbgsym_20101212+dfsg1-5_armhf.deb 7e5e5c05b301ac813efe1f5aa7218c6408d8ab5852818165bb56500e6665856f 20564 nast-ier_20101212+dfsg1-5_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Thu, 13 Jan 2022 09:14:55 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.71-2), automake (= 1:1.16.5-1.1), autopoint (= 0.21-4), autotools-dev (= 20180224.1+nmu1), base-files (= 12), base-passwd (= 3.5.52), bash (= 5.1-6), binutils (= 2.37.50.20220106-2), binutils-common (= 2.37.50.20220106-2), binutils-x86-64-linux-gnu (= 2.37.50.20220106-2), bsdextrautils (= 2.37.2-6), bsdutils (= 1:2.37.2-6), build-essential (= 12.9), bzip2 (= 1.0.8-5), cdbfasta (= 1.00+git20181005.014498c+dfsg-4), coreutils (= 8.32-4.1), cpp (= 4:11.2.0-2), cpp-11 (= 11.2.0-14), dash (= 0.5.11+git20210903+057cd650a4ed-3), debconf (= 1.5.79), debhelper (= 13.6), debianutils (= 5.5-1), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.0-1), diffutils (= 1:3.7-5), dpkg (= 1.21.1), dpkg-dev (= 1.21.1), dwz (= 0.14-1), file (= 1:5.41-2), findutils (= 4.8.0-1), g++ (= 4:11.2.0-2), g++-11 (= 11.2.0-14), gcc (= 4:11.2.0-2), gcc-11 (= 11.2.0-14), gcc-11-base (= 11.2.0-14), gettext (= 0.21-4), gettext-base (= 0.21-4), grep (= 3.7-1), groff-base (= 1.22.4-8), gzip (= 1.10-4), hostname (= 3.23), init-system-helpers (= 1.61), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.3.1-1), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.2.0-14), libatomic1 (= 11.2.0-14), libattr1 (= 1:2.5.1-1), libaudit-common (= 1:3.0.6-1), libaudit1 (= 1:3.0.6-1+b1), libbinutils (= 2.37.50.20220106-2), libblkid1 (= 2.37.2-6), libbz2-1.0 (= 1.0.8-5), libc-bin (= 2.33-2), libc-dev-bin (= 2.33-2), libc6 (= 2.33-2), libc6-dev (= 2.33-2), libcap-ng0 (= 0.7.9-2.2+b1), libcap2 (= 1:2.44-1), libcc1-0 (= 11.2.0-14), libcom-err2 (= 1.46.5-2), libcrypt-dev (= 1:4.4.27-1), libcrypt1 (= 1:4.4.27-1), libctf-nobfd0 (= 2.37.50.20220106-2), libctf0 (= 2.37.50.20220106-2), libdb5.3 (= 5.3.28+dfsg1-0.8), libdebconfclient0 (= 0.261), libdebhelper-perl (= 13.6), libdpkg-perl (= 1.21.1), libelf1 (= 0.186-1), libexpat1 (= 2.4.2-1), libffi8 (= 3.4.2-3), libfile-stripnondeterminism-perl (= 1.13.0-1), libgcc-11-dev (= 11.2.0-14), libgcc-s1 (= 11.2.0-14), libgclib3 (= 0.12.7+ds-4), libgcrypt20 (= 1.9.4-5), libgdbm-compat4 (= 1.22-1), libgdbm6 (= 1.22-1), libgmp10 (= 2:6.2.1+dfsg-3), libgomp1 (= 11.2.0-14), libgpg-error0 (= 1.43-1), libgssapi-krb5-2 (= 1.18.3-7), libicu67 (= 67.1-7), libisl23 (= 0.24-2), libitm1 (= 11.2.0-14), libk5crypto3 (= 1.18.3-7), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.18.3-7), libkrb5support0 (= 1.18.3-7), liblmdb0 (= 0.9.24-1), liblsan0 (= 11.2.0-14), liblz4-1 (= 1.9.3-2), liblzma5 (= 5.2.5-2), libmagic-mgc (= 1:5.41-2), libmagic1 (= 1:5.41-2), libmbedcrypto3 (= 2.16.11-0.3), libmbedtls12 (= 2.16.11-0.3), libmbedx509-0 (= 2.16.11-0.3), libmount1 (= 2.37.2-6), libmpc3 (= 1.2.1-1), libmpdec3 (= 2.5.1-2), libmpfr6 (= 4.1.0-3), libncursesw6 (= 6.3-1), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libpam-modules (= 1.4.0-11), libpam-modules-bin (= 1.4.0-11), libpam-runtime (= 1.4.0-11), libpam0g (= 1.4.0-11), libpcre2-8-0 (= 10.39-3), libpcre3 (= 2:8.39-13), libperl5.32 (= 5.32.1-6), libpipeline1 (= 1.5.5-1), libpython3-stdlib (= 3.9.8-1), libpython3.9-minimal (= 3.9.9-4), libpython3.9-stdlib (= 3.9.9-4), libquadmath0 (= 11.2.0-14), libreadline8 (= 8.1.2-1), libseccomp2 (= 2.5.3-2), libselinux1 (= 3.3-1+b1), libsigsegv2 (= 2.13-1), libsmartcols1 (= 2.37.2-6), libsqlite3-0 (= 3.37.2-1), libssl1.1 (= 1.1.1m-1), libstdc++-11-dev (= 11.2.0-14), libstdc++6 (= 11.2.0-14), libsub-override-perl (= 0.09-2), libsystemd0 (= 250.2-2), libtinfo6 (= 6.3-1), libtirpc-common (= 1.3.2-2), libtirpc-dev (= 1.3.2-2), libtirpc3 (= 1.3.2-2), libtool (= 2.4.6-15), libtsan0 (= 11.2.0-14), libubsan1 (= 11.2.0-14), libuchardet0 (= 0.0.7-1), libudev1 (= 250.2-2), libunistring2 (= 0.9.10-6), libuuid1 (= 2.37.2-6), libxml2 (= 2.9.12+dfsg-5+b1), libzstd1 (= 1.4.8+dfsg-3), linux-libc-dev (= 5.15.5-2), login (= 1:4.8.1-2), lsb-base (= 11.1.0), m4 (= 1.4.18-5), make (= 4.3-4.1), man-db (= 2.9.4-4), mawk (= 1.3.4.20200120-2), media-types (= 4.0.0), ncbi-blast+ (= 2.12.0+ds-2), ncbi-blast+-legacy (= 2.12.0+ds-2), ncbi-data (= 6.1.20170106+dfsg1-9), ncurses-base (= 6.3-1), ncurses-bin (= 6.3-1), patch (= 2.7.6-7), perl (= 5.32.1-6), perl-base (= 5.32.1-6), perl-modules-5.32 (= 5.32.1-6), po-debconf (= 1.0.21+nmu1), python3 (= 3.9.8-1), python3-minimal (= 3.9.8-1), python3.9 (= 3.9.9-4), python3.9-minimal (= 3.9.9-4), readline-common (= 8.1.2-1), rpcsvc-proto (= 1.4.2-4), sed (= 4.8-1), sensible-utils (= 0.0.17), sysvinit-utils (= 3.01-1), tar (= 1.34+dfsg-1), tzdata (= 2021e-1), util-linux (= 2.37.2-6), xz-utils (= 5.2.5-2), zlib1g (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1641832194" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ nast-ier-dbgsym_20101212+dfsg1-5_armhf.deb ------------------------------------------ new Debian package, version 2.0. size 14064 bytes: control archive=552 bytes. 397 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: nast-ier-dbgsym Source: microbiomeutil Version: 20101212+dfsg1-5 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 28 Depends: nast-ier (= 20101212+dfsg1-5) Section: debug Priority: optional Description: debug symbols for nast-ier Build-Ids: e709ab4d891ea2f01b12a67ad2ecb68677c6983e drwxr-xr-x root/root 0 2022-01-10 16:29 ./ drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/ drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/lib/ drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/lib/debug/ drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/lib/debug/.build-id/e7/ -rw-r--r-- root/root 17656 2022-01-10 16:29 ./usr/lib/debug/.build-id/e7/09ab4d891ea2f01b12a67ad2ecb68677c6983e.debug drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/share/ drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/share/doc/ lrwxrwxrwx root/root 0 2022-01-10 16:29 ./usr/share/doc/nast-ier-dbgsym -> nast-ier nast-ier_20101212+dfsg1-5_armhf.deb ----------------------------------- new Debian package, version 2.0. size 20564 bytes: control archive=1384 bytes. 742 bytes, 20 lines control 1533 bytes, 20 lines md5sums Package: nast-ier Source: microbiomeutil Version: 20101212+dfsg1-5 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 92 Depends: libc6 (>= 2.4), microbiomeutil-data, cdbfasta Recommends: ncbi-blast+ Section: science Priority: optional Homepage: http://microbiomeutil.sourceforge.net/ Description: NAST-based DNA alignment tool The NAST-iEr alignment utility aligns a single raw nucleotide sequence against one or more NAST formatted sequences. . The alignment algorithm involves global dynamic programming profile alignment to fixed (NAST-formatted) multiply aligned template sequences without any end-gap penalty. . NAST-iEr is part of the microbiomeutil suite. drwxr-xr-x root/root 0 2022-01-10 16:29 ./ drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/ drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/bin/ lrwxrwxrwx root/root 0 2022-01-10 16:29 ./usr/bin/nast-ier -> ../lib/NAST-iEr/run_NAST-iEr.pl drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/lib/ drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/lib/NAST-iEr/ -rwxr-xr-x root/root 9648 2022-01-10 16:29 ./usr/lib/NAST-iEr/NAST-iEr drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/lib/NAST-iEr/PerlLib/ -rw-r--r-- root/root 2453 2022-01-10 16:29 ./usr/lib/NAST-iEr/PerlLib/CdbTools.pm -rw-r--r-- root/root 2980 2022-01-10 16:29 ./usr/lib/NAST-iEr/PerlLib/Fasta_reader.pm -rw-r--r-- root/root 10294 2022-01-10 16:29 ./usr/lib/NAST-iEr/PerlLib/Nuc_translator.pm -rw-r--r-- root/root 2059 2010-12-12 13:36 ./usr/lib/NAST-iEr/README drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/lib/NAST-iEr/iterative_refinement/ -rwxr-xr-x root/root 615 2022-01-10 16:29 ./usr/lib/NAST-iEr/iterative_refinement/compare_DBs.pl -rwxr-xr-x root/root 624 2022-01-10 16:29 ./usr/lib/NAST-iEr/iterative_refinement/iteratively_realign_db_selfsearch.pl -rwxr-xr-x root/root 411 2022-01-10 16:29 ./usr/lib/NAST-iEr/iterative_refinement/quant_differences.pl -rwxr-xr-x root/root 5375 2022-01-10 16:29 ./usr/lib/NAST-iEr/run_NAST-iEr.pl drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/lib/NAST-iEr/util/ -rwxr-xr-x root/root 1425 2022-01-10 16:29 ./usr/lib/NAST-iEr/util/apply_NAST_MASK.pl drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/lib/NAST-iEr/util/masks/ -rw-r--r-- root/root 7735 2010-12-12 13:36 ./usr/lib/NAST-iEr/util/masks/eco.prokMSA -rw-r--r-- root/root 7821 2010-12-12 13:36 ./usr/lib/NAST-iEr/util/masks/lanemask.NAST -rwxr-xr-x root/root 1179 2022-01-10 16:29 ./usr/lib/NAST-iEr/util/mfasta_remove_allGapCols.pl -rwxr-xr-x root/root 503 2022-01-10 16:29 ./usr/lib/NAST-iEr/util/mfasta_remove_gaps.pl -rwxr-xr-x root/root 2748 2022-01-10 16:29 ./usr/lib/NAST-iEr/util/show_malign_no_gap.pl -rwxr-xr-x root/root 2936 2022-01-10 16:29 ./usr/lib/NAST-iEr/util/show_malign_no_gap_no_identical_cols.pl drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/share/ drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/share/doc/nast-ier/ -rw-r--r-- root/root 2059 2010-12-12 13:36 ./usr/share/doc/nast-ier/README -rw-r--r-- root/root 2067 2022-01-10 16:29 ./usr/share/doc/nast-ier/changelog.Debian.gz -rw-r--r-- root/root 1898 2022-01-10 16:29 ./usr/share/doc/nast-ier/copyright lrwxrwxrwx root/root 0 2022-01-10 16:29 ./usr/share/doc/nast-ier/examples -> ../microbiomeutil-data/examples/NAST-iEr drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/share/man/ drwxr-xr-x root/root 0 2022-01-10 16:29 ./usr/share/man/man1/ -rw-r--r-- root/root 672 2022-01-10 16:29 ./usr/share/man/man1/nast-ier.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [556 B] Get:5 copy:/<>/apt_archive ./ Packages [648 B] Fetched 2167 B in 0s (82.4 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-ipv6addr-perl libnet-netmask-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libwww-perl binutils-multiarch libtext-template-perl zip Recommended packages: gnupg liblist-someutils-xs-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-ipv6addr-perl libnet-netmask-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils sbuild-build-depends-lintian-dummy:armhf t1utils unzip 0 upgraded, 100 newly installed, 0 to remove and 0 not upgraded. Need to get 6749 kB of archives. After this operation, 20.9 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.64-1 [36.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.5-1 [51.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.27-3 [548 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.27-3 [927 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libaliased-perl all 0.34-1.1 [14.1 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.40 [72.2 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b3 [11.3 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1.1 [12.7 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b2 [15.9 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b3 [25.7 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.31-1 [24.2 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1.1 [12.4 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b3 [45.7 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.25-1 [19.5 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b7 [38.1 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1+b1 [15.4 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-tiny-perl all 2.28-1 [17.3 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-util-perl amd64 1.102-1+b1 [25.6 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-install-perl all 0.928-1.1 [10.8 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-optlist-perl all 0.112-1 [11.8 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-perl all 0.988-1 [51.9 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libconst-fast-perl all 0.014-1.1 [8552 B] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.27-1 [129 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-perl all 0.03+ds1-1.1 [18.4 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-1.1 [13.7 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002002-1 [37.8 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-xs-perl amd64 0.430-2 [40.9 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-messagepack-perl amd64 1.01-2 [35.5 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1.1 [33.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-netmask-perl all 2.0001-1 [32.2 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-1+b5 [104 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-ip-perl all 0.30-1 [21.0 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-uri-perl all 0.07-1 [10.7 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b2 [26.1 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-address-xs-perl amd64 1.04-1+b3 [28.0 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.09-1 [16.4 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-2 [7448 B] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.11-2 [8992 B] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1.1 [318 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-html5-entities-perl all 0.004-1.1 [21.3 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libio-interactive-perl all 1.023-1 [11.5 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libio-prompt-tiny-perl all 0.003-1 [9150 B] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004003-1 [13.1 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-someutils-perl all 0.58-1 [36.5 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-utilsby-perl all 0.11-1 [15.4 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.005004-3 [60.5 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1.1 [10.8 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libmouse-perl amd64 2.5.10-1+b1 [172 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.39-1 [21.9 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b3 [12.0 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1+b1 [13.8 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.120-1 [54.7 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-gzip-perl amd64 0.19-1+b7 [17.4 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-utf8-strict-perl amd64 0.009-1 [11.8 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libproc-processtable-perl amd64 0.634-1 [46.5 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.018+ds-1+b1 [99.3 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.018+ds-1+b1 [103 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libsort-versions-perl all 1.62-1 [11.0 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libxs-parse-keyword-perl amd64 0.21-1 [50.8 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libsyntax-keyword-try-perl amd64 0.26-1 [28.7 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libterm-readkey-perl amd64 2.38-1+b2 [27.8 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-4+b8 [8724 B] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.13-1 [13.2 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.9-1 [197 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b3 [75.8 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b2 [20.3 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 5.10-1 [91.0 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.83+ds-1 [35.5 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.22-5 [88.3 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-26 [171 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.114.0 [1382 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 6749 kB in 0s (30.0 MB/s) Selecting previously unselected package diffstat. (Reading database ... 22072 files and directories currently installed.) Preparing to unpack .../00-diffstat_1.64-1_amd64.deb ... Unpacking diffstat (1.64-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../01-libassuan0_2.5.5-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.5-1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../02-gpgconf_2.2.27-3_amd64.deb ... Unpacking gpgconf (2.2.27-3) ... Selecting previously unselected package gpg. Preparing to unpack .../03-gpg_2.2.27-3_amd64.deb ... Unpacking gpg (2.2.27-3) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../04-libaliased-perl_0.34-1.1_all.deb ... Unpacking libaliased-perl (0.34-1.1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../05-libapt-pkg-perl_0.1.40_amd64.deb ... Unpacking libapt-pkg-perl (0.1.40) ... Selecting previously unselected package libb-hooks-op-check-perl. Preparing to unpack .../06-libb-hooks-op-check-perl_0.22-1+b3_amd64.deb ... Unpacking libb-hooks-op-check-perl (0.22-1+b3) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../07-libdynaloader-functions-perl_0.003-1.1_all.deb ... Unpacking libdynaloader-functions-perl (0.003-1.1) ... Selecting previously unselected package libdevel-callchecker-perl. Preparing to unpack .../08-libdevel-callchecker-perl_0.008-1+b2_amd64.deb ... Unpacking libdevel-callchecker-perl (0.008-1+b2) ... Selecting previously unselected package libparams-classify-perl. Preparing to unpack .../09-libparams-classify-perl_0.015-1+b3_amd64.deb ... Unpacking libparams-classify-perl (0.015-1+b3) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../10-libmodule-runtime-perl_0.016-1_all.deb ... Unpacking libmodule-runtime-perl (0.016-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../11-libtry-tiny-perl_0.31-1_all.deb ... Unpacking libtry-tiny-perl (0.31-1) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../12-libmodule-implementation-perl_0.09-1.1_all.deb ... Unpacking libmodule-implementation-perl (0.09-1.1) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../13-libsub-exporter-progressive-perl_0.001013-1_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-1) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../14-libvariable-magic-perl_0.62-1+b3_amd64.deb ... Unpacking libvariable-magic-perl (0.62-1+b3) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../15-libb-hooks-endofscope-perl_0.25-1_all.deb ... Unpacking libb-hooks-endofscope-perl (0.25-1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../16-libcapture-tiny-perl_0.48-1_all.deb ... Unpacking libcapture-tiny-perl (0.48-1) ... Selecting previously unselected package libclass-data-inheritable-perl. Preparing to unpack .../17-libclass-data-inheritable-perl_0.08-3_all.deb ... Unpacking libclass-data-inheritable-perl (0.08-3) ... Selecting previously unselected package libclass-method-modifiers-perl. Preparing to unpack .../18-libclass-method-modifiers-perl_2.13-1_all.deb ... Unpacking libclass-method-modifiers-perl (2.13-1) ... Selecting previously unselected package libclass-xsaccessor-perl. Preparing to unpack .../19-libclass-xsaccessor-perl_1.19-3+b7_amd64.deb ... Unpacking libclass-xsaccessor-perl (1.19-3+b7) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../20-libclone-perl_0.45-1+b1_amd64.deb ... Unpacking libclone-perl (0.45-1+b1) ... Selecting previously unselected package libconfig-tiny-perl. Preparing to unpack .../21-libconfig-tiny-perl_2.28-1_all.deb ... Unpacking libconfig-tiny-perl (2.28-1) ... Selecting previously unselected package libparams-util-perl. Preparing to unpack .../22-libparams-util-perl_1.102-1+b1_amd64.deb ... Unpacking libparams-util-perl (1.102-1+b1) ... Selecting previously unselected package libsub-install-perl. Preparing to unpack .../23-libsub-install-perl_0.928-1.1_all.deb ... Unpacking libsub-install-perl (0.928-1.1) ... Selecting previously unselected package libdata-optlist-perl. Preparing to unpack .../24-libdata-optlist-perl_0.112-1_all.deb ... Unpacking libdata-optlist-perl (0.112-1) ... Selecting previously unselected package libsub-exporter-perl. Preparing to unpack .../25-libsub-exporter-perl_0.988-1_all.deb ... Unpacking libsub-exporter-perl (0.988-1) ... Selecting previously unselected package libconst-fast-perl. Preparing to unpack .../26-libconst-fast-perl_0.014-1.1_all.deb ... Unpacking libconst-fast-perl (0.014-1.1) ... Selecting previously unselected package libcpanel-json-xs-perl:amd64. Preparing to unpack .../27-libcpanel-json-xs-perl_4.27-1_amd64.deb ... Unpacking libcpanel-json-xs-perl:amd64 (4.27-1) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../28-libdevel-stacktrace-perl_2.0400-1_all.deb ... Unpacking libdevel-stacktrace-perl (2.0400-1) ... Selecting previously unselected package libexception-class-perl. Preparing to unpack .../29-libexception-class-perl_1.45-1_all.deb ... Unpacking libexception-class-perl (1.45-1) ... Selecting previously unselected package libiterator-perl. Preparing to unpack .../30-libiterator-perl_0.03+ds1-1.1_all.deb ... Unpacking libiterator-perl (0.03+ds1-1.1) ... Selecting previously unselected package libiterator-util-perl. Preparing to unpack .../31-libiterator-util-perl_0.02+ds1-1.1_all.deb ... Unpacking libiterator-util-perl (0.02+ds1-1.1) ... Selecting previously unselected package libexporter-tiny-perl. Preparing to unpack .../32-libexporter-tiny-perl_1.002002-1_all.deb ... 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Setting up lzip (1.22-5) ... update-alternatives: using /usr/bin/lzip.lzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.lzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.lzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up t1utils (1.41-4) ... Setting up diffstat (1.64-1) ... Setting up libvariable-magic-perl (0.62-1+b3) ... Setting up libb-hooks-op-check-perl (0.22-1+b3) ... Setting up liblist-moreutils-xs-perl (0.430-2) ... Setting up libparams-util-perl (1.102-1+b1) ... Setting up libtime-duration-perl (1.21-1) ... Setting up libtext-xslate-perl:amd64 (3.5.9-1) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libsub-name-perl (0.26-1+b1) ... Setting up libsyntax-keyword-try-perl (0.26-1) ... Setting up libdata-validate-domain-perl (0.10-1.1) ... Setting up libproc-processtable-perl:amd64 (0.634-1) ... Setting up libpath-tiny-perl (0.120-1) ... Setting up lzop (1.04-2) ... Setting up gpgconf (2.2.27-3) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libipc-run3-perl (0.048-2) ... Setting up libaliased-perl (0.34-1.1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libdevel-stacktrace-perl (2.0400-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b7) ... Setting up libsort-versions-perl (1.62-1) ... Setting up libexporter-tiny-perl (1.002002-1) ... Setting up libterm-readkey-perl (2.38-1+b2) ... Setting up libfont-ttf-perl (1.06-1.1) ... Setting up libtext-levenshteinxs-perl (0.03-4+b8) ... Setting up libperlio-gzip-perl (0.19-1+b7) ... Setting up libhtml-html5-entities-perl (0.004-1.1) ... Setting up libsereal-decoder-perl (4.018+ds-1+b1) ... Setting up libmarkdown2:amd64 (2.2.7-2) ... Setting up liburi-perl (5.10-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up gpg (2.2.27-3) ... Setting up libdata-validate-ip-perl (0.30-1) ... Setting up libemail-address-xs-perl (1.04-1+b3) ... Setting up libfile-basedir-perl (0.09-1) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libtext-markdown-discount-perl:amd64 (0.13-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl (0.008-1+b2) ... Setting up libdata-validate-uri-perl (0.07-1) ... Setting up libdata-optlist-perl (0.112-1) ... Setting up libsub-exporter-perl (0.988-1) ... Setting up libiterator-perl (0.03+ds1-1.1) ... Setting up libiterator-util-perl (0.02+ds1-1.1) ... Setting up libparams-classify-perl (0.015-1+b3) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libconst-fast-perl (0.014-1.1) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-1.1) ... Setting up libpackage-stash-perl (0.39-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.005004-3) ... Setting up liblist-someutils-perl (0.58-1) ... Setting up libmoox-aliases-perl (0.001006-1.1) ... Setting up libb-hooks-endofscope-perl (0.25-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.114.0) ... Setting up sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Processing triggers for man-db (2.9.4-4) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.33-2) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 53396 Build-Time: 7 Distribution: unstable Foreign Architectures: armhf Host Architecture: armhf Install-Time: 42 Job: microbiomeutil_20101212+dfsg1-5 Lintian: pass Machine Architecture: amd64 Package: microbiomeutil Package-Time: 67 Source-Version: 20101212+dfsg1-5 Space: 53396 Status: successful Version: 20101212+dfsg1-5 -------------------------------------------------------------------------------- Finished at 2022-01-13T09:14:56Z Build needed 00:01:07, 53396k disk space