sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | mindthegap 2.3.0-1 (mips64el) Wed, 01 Jun 2022 00:18:34 +0000 | +==============================================================================+ Package: mindthegap Version: 2.3.0-1 Source Version: 2.3.0-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: mips64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-f7bfa82e-f800-46fe-a1c5-eb685bce7c48' with '<>' I: NOTICE: Log filtering will replace 'build/mindthegap-JgqtJc/resolver-aliHdx' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [165 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2022-05-31-2010.32-F-2022-05-31-0803.28.pdiff [38.3 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2022-05-31-2010.32-F-2022-05-31-0803.28.pdiff [45.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2022-05-31-2010.32-F-2022-05-31-0803.28.pdiff [38.3 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2022-05-31-2010.32-F-2022-05-31-0803.28.pdiff [45.9 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main mips64el Packages [8847 kB] Fetched 9224 kB in 4s (2309 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'mindthegap' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/mindthegap.git Please use: git clone https://salsa.debian.org/med-team/mindthegap.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 787 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main mindthegap 2.3.0-1 (dsc) [2141 B] Get:2 http://debian.oregonstate.edu/debian unstable/main mindthegap 2.3.0-1 (tar) [778 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main mindthegap 2.3.0-1 (diff) [7432 B] Fetched 787 kB in 0s (3212 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/mindthegap-JgqtJc/mindthegap-2.3.0' with '<>' I: NOTICE: Log filtering will replace 'build/mindthegap-JgqtJc' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), cmake, libgatbcore-dev (>= 1.4.2+dfsg-7), libboost-dev, zlib1g-dev, libhdf5-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el Filtered Build-Depends: debhelper-compat (= 13), cmake, libgatbcore-dev (>= 1.4.2+dfsg-7), libboost-dev, zlib1g-dev, libhdf5-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [446 B] Get:5 copy:/<>/apt_archive ./ Packages [540 B] Fetched 1943 B in 0s (73.5 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdextrautils build-essential cmake cmake-data cpp-11-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el debhelper dh-autoreconf dh-elpa-helper dh-strip-nondeterminism dpkg-cross dpkg-dev dwz emacsen-common file g++ g++-11 g++-11-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-11-base:mips64el gcc-11-cross-base-mipsen gcc-11-mips64el-linux-gnuabi64 gcc-11-mips64el-linux-gnuabi64-base gcc-12-base:mips64el gcc-12-cross-base-mipsen gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base hdf5-helpers:mips64el intltool-debian libaec-dev:mips64el libaec0:mips64el libarchive-zip-perl libarchive13 libatomic1:mips64el libatomic1-mips64el-cross libboost-dev:mips64el libboost1.74-dev:mips64el libbrotli1 libbrotli1:mips64el libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libcom-err2:mips64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libcurl4 libcurl4:mips64el libcurl4-openssl-dev:mips64el libdb5.3:mips64el libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libexpat1 libffi8:mips64el libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgatbcore-dev:mips64el libgatbcore3:mips64el libgcc-11-dev:mips64el libgcc-11-dev-mips64el-cross libgcc-s1:mips64el libgcc-s1-mips64el-cross libgfortran5:mips64el libgmp10:mips64el libgnutls30:mips64el libgomp1:mips64el libgomp1-mips64el-cross libgssapi-krb5-2 libgssapi-krb5-2:mips64el libhdf5-103-1:mips64el libhdf5-cpp-103-1:mips64el libhdf5-dev:mips64el libhdf5-fortran-102:mips64el libhdf5-hl-100:mips64el libhdf5-hl-cpp-100:mips64el libhdf5-hl-fortran-100:mips64el libhogweed6:mips64el libicu71 libidn2-0:mips64el libio-string-perl libjpeg-dev:mips64el libjpeg62-turbo:mips64el libjpeg62-turbo-dev:mips64el libjsoncpp25 libk5crypto3 libk5crypto3:mips64el libkeyutils1 libkeyutils1:mips64el libkrb5-3 libkrb5-3:mips64el libkrb5support0 libkrb5support0:mips64el libldap-2.5-0 libldap-2.5-0:mips64el liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libnettle8:mips64el libnghttp2-14 libnghttp2-14:mips64el libnsl-dev libnsl-dev:mips64el libnsl2 libnsl2:mips64el libp11-kit0:mips64el libperl5.34 libpipeline1 libprocps8 libpsl5 libpsl5:mips64el librhash0 librtmp1 librtmp1:mips64el libsasl2-2 libsasl2-2:mips64el libsasl2-modules-db libsasl2-modules-db:mips64el libsigsegv2 libssh2-1 libssh2-1:mips64el libssl-dev:mips64el libssl3 libssl3:mips64el libstdc++-11-dev libstdc++-11-dev:mips64el libstdc++-11-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libsz2:mips64el libtasn1-6:mips64el libtirpc-common libtirpc-dev libtirpc-dev:mips64el libtirpc3 libtirpc3:mips64el libtool libuchardet0 libunistring2:mips64el libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:mips64el linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db perl perl-modules-5.34 po-debconf procps rpcsvc-proto sensible-utils ucf zlib1g:mips64el zlib1g-dev:mips64el Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc cmake-doc ninja-build cmake-format gcc-11-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-11-multilib gcc-11-doc g++-11-multilib-mips64el-linux-gnuabi64 gcc-11-multilib-mips64el-linux-gnuabi64 manpages-dev flex bison gdb-mips64el-linux-gnuabi64 gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libboost-doc:mips64el libboost1.74-doc:mips64el libboost-atomic1.74-dev:mips64el libboost-chrono1.74-dev:mips64el libboost-container1.74-dev:mips64el libboost-context1.74-dev:mips64el libboost-contract1.74-dev:mips64el libboost-coroutine1.74-dev:mips64el libboost-date-time1.74-dev:mips64el libboost-exception1.74-dev:mips64el libboost-fiber1.74-dev:mips64el libboost-filesystem1.74-dev:mips64el libboost-graph1.74-dev:mips64el libboost-graph-parallel1.74-dev:mips64el libboost-iostreams1.74-dev:mips64el libboost-locale1.74-dev:mips64el libboost-log1.74-dev:mips64el libboost-math1.74-dev:mips64el libboost-mpi1.74-dev:mips64el libboost-mpi-python1.74-dev:mips64el libboost-numpy1.74-dev:mips64el libboost-program-options1.74-dev:mips64el libboost-python1.74-dev:mips64el libboost-random1.74-dev:mips64el libboost-regex1.74-dev:mips64el libboost-serialization1.74-dev:mips64el libboost-stacktrace1.74-dev:mips64el libboost-system1.74-dev:mips64el libboost-test1.74-dev:mips64el libboost-thread1.74-dev:mips64el libboost-timer1.74-dev:mips64el libboost-type-erasure1.74-dev:mips64el libboost-wave1.74-dev:mips64el libboost1.74-tools-dev:mips64el libmpfrc++-dev:mips64el libntl-dev:mips64el libboost-nowide1.74-dev:mips64el glibc-doc:mips64el libc-l10n:mips64el locales:mips64el libnss-nis:mips64el libnss-nisplus:mips64el glibc-doc manpages-dev:mips64el libcurl4-doc:mips64el libidn11-dev:mips64el libkrb5-dev:mips64el libldap2-dev:mips64el librtmp-dev:mips64el libssh2-1-dev:mips64el pkg-config:mips64el gnupg git bzr gnutls-bin:mips64el krb5-doc krb5-user krb5-doc:mips64el krb5-user:mips64el libhdf5-doc:mips64el libssl-doc:mips64el libstdc++-11-doc libstdc++-11-doc:mips64el libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx ca-certificates ca-certificates:mips64el libfile-fcntllock-perl libarchive-cpio-perl krb5-locales krb5-locales:mips64el libldap-common libldap-common:mips64el libgpm2 publicsuffix publicsuffix:mips64el libssl1.1 libsasl2-modules libsasl2-modules:mips64el libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdextrautils build-essential cmake cmake-data cpp-11-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el debhelper dh-autoreconf dh-elpa-helper dh-strip-nondeterminism dpkg-cross dpkg-dev dwz emacsen-common file g++ g++-11 g++-11-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-11-base:mips64el gcc-11-cross-base-mipsen gcc-11-mips64el-linux-gnuabi64 gcc-11-mips64el-linux-gnuabi64-base gcc-12-base:mips64el gcc-12-cross-base-mipsen gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base hdf5-helpers:mips64el intltool-debian libaec-dev:mips64el libaec0:mips64el libarchive-zip-perl libarchive13 libatomic1:mips64el libatomic1-mips64el-cross libboost-dev:mips64el libboost1.74-dev:mips64el libbrotli1 libbrotli1:mips64el libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libcom-err2:mips64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libcurl4 libcurl4:mips64el libcurl4-openssl-dev:mips64el libdb5.3:mips64el libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libexpat1 libffi8:mips64el libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgatbcore-dev:mips64el libgatbcore3:mips64el libgcc-11-dev:mips64el libgcc-11-dev-mips64el-cross libgcc-s1:mips64el libgcc-s1-mips64el-cross libgfortran5:mips64el libgmp10:mips64el libgnutls30:mips64el libgomp1:mips64el libgomp1-mips64el-cross libgssapi-krb5-2 libgssapi-krb5-2:mips64el libhdf5-103-1:mips64el libhdf5-cpp-103-1:mips64el libhdf5-dev:mips64el libhdf5-fortran-102:mips64el libhdf5-hl-100:mips64el libhdf5-hl-cpp-100:mips64el libhdf5-hl-fortran-100:mips64el libhogweed6:mips64el libicu71 libidn2-0:mips64el libio-string-perl libjpeg-dev:mips64el libjpeg62-turbo:mips64el libjpeg62-turbo-dev:mips64el libjsoncpp25 libk5crypto3 libk5crypto3:mips64el libkeyutils1 libkeyutils1:mips64el libkrb5-3 libkrb5-3:mips64el libkrb5support0 libkrb5support0:mips64el libldap-2.5-0 libldap-2.5-0:mips64el liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libnettle8:mips64el libnghttp2-14 libnghttp2-14:mips64el libnsl-dev libnsl-dev:mips64el libnsl2 libnsl2:mips64el libp11-kit0:mips64el libperl5.34 libpipeline1 libprocps8 libpsl5 libpsl5:mips64el librhash0 librtmp1 librtmp1:mips64el libsasl2-2 libsasl2-2:mips64el libsasl2-modules-db libsasl2-modules-db:mips64el libsigsegv2 libssh2-1 libssh2-1:mips64el libssl-dev:mips64el libssl3 libssl3:mips64el libstdc++-11-dev libstdc++-11-dev:mips64el libstdc++-11-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libsz2:mips64el libtasn1-6:mips64el libtirpc-common libtirpc-dev libtirpc-dev:mips64el libtirpc3 libtirpc3:mips64el libtool libuchardet0 libunistring2:mips64el libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:mips64el linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db perl perl-modules-5.34 po-debconf procps rpcsvc-proto sbuild-build-depends-main-dummy:mips64el sensible-utils ucf zlib1g:mips64el zlib1g-dev:mips64el 0 upgraded, 179 newly installed, 0 to remove and 0 not upgraded. Need to get 145 MB of archives. After this operation, 765 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [968 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.34 all 5.34.0-4 [2850 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.34 amd64 5.34.0-4 [4200 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.34.0-4 [297 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4+b2 [19.2 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.3+20220423-2 [102 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libprocps8 amd64 2:3.3.17-7+b1 [64.2 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 procps amd64 2:3.3.17-7+b1 [502 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.41-4 [295 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.41-4 [129 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.41-4 [67.0 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.21-6 [175 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-8 [936 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.38-4 [144 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.6-1 [38.6 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.10.2-1 [1411 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.14-1 [37.2 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-5 [204 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.71-2 [343 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.21-6 [510 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mips64el-linux-gnuabi64 amd64 2.38-1cross2 [2726 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.27-1.1 [118 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5support0 amd64 1.19.2-2+b2 [65.9 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libk5crypto3 amd64 1.19.2-2+b2 [114 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libkeyutils1 amd64 1.6.1-3 [15.5 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libssl3 amd64 3.0.3-5 [2032 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5-3 amd64 1.19.2-2+b2 [363 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.19.2-2+b2 [166 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-common all 1.3.2-2 [13.8 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc3 amd64 1.3.2-2 [83.9 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl2 amd64 1.3.0-2 [39.5 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.3.2-2 [190 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 rpcsvc-proto amd64 1.4.2-4 [63.1 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.33-7 [2289 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-11-dev amd64 11.3.0-3 [1965 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 g++-11 amd64 11.3.0-3 [10.2 MB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:11.2.0-2 [1636 B] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.21.8 [1615 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.21.8 [2357 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.9 [7704 B] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libicu71 amd64 71.1-3 [9218 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.14+dfsg-1 [708 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive13 amd64 3.6.0-1 [350 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libbrotli1 amd64 1.0.9-2+b3 [276 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-6 [38.4 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg-6 [77.3 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.12+dfsg-2 [227 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libnghttp2-14 amd64 1.47.0-1+b1 [76.3 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libpsl5 amd64 0.21.0-1.2 [57.3 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libssh2-1 amd64 1.10.0-3+b1 [179 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libcurl4 amd64 7.83.1-1+b1 [358 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.4.8-1 [109 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libjsoncpp25 amd64 1.9.5-4 [78.6 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 librhash0 amd64 1.4.2-1 [129 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libuv1 amd64 1.44.1-2 [138 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 dh-elpa-helper all 2.0.10 [11.3 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 emacsen-common all 3.0.4 [19.3 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 cmake-data all 3.23.2-1 [1939 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 cmake amd64 3.23.2-1 [8209 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-mips64el-linux-gnuabi64-base amd64 11.2.0-18cross2 [208 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-11-mips64el-linux-gnuabi64 amd64 11.2.0-18cross2 [7495 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mips64el-linux-gnuabi64 amd64 4:11.2.0-2 [16.9 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.18+nmu2 [31.7 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-cross-base-mipsen all 11.2.0-18cross2 [203 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-12-cross-base-mipsen all 12-20220319-1cross2 [202 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mips64el-cross all 2.33-1cross1 [1323 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-mips64el-cross all 12-20220319-1cross2 [70.7 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mips64el-cross all 12-20220319-1cross2 [102 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mips64el-cross all 12-20220319-1cross2 [7172 B] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-11-dev-mips64el-cross all 11.2.0-18cross2 [281 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-mips64el-linux-gnuabi64 amd64 11.2.0-18cross2 [14.6 MB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mips64el-linux-gnuabi64 amd64 4:11.2.0-2 [1476 B] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mips64el-cross all 12-20220319-1cross2 [507 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mips64el-cross all 5.15.5-1cross1 [1566 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mips64el-cross all 2.33-1cross1 [2103 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-11-dev-mips64el-cross all 11.2.0-18cross2 [2001 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 g++-11-mips64el-linux-gnuabi64 amd64 11.2.0-18cross2 [8344 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mips64el-linux-gnuabi64 amd64 4:11.2.0-2 [1188 B] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1 [337 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1.1 [19.0 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.27-1 [17.3 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu2 [30.6 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.18+nmu2 [40.9 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mips64el all 12.9 [6740 B] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.7.1 [195 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.7-4 [526 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.13.0-1 [15.8 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.187-1 [179 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.21-6 [1310 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.7.1 [1071 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main mips64el gcc-11-base mips64el 11.3.0-3 [209 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main mips64el gcc-12-base mips64el 12.1.0-2 [207 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main mips64el hdf5-helpers mips64el 1.10.7+repack-4+b1 [43.1 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-s1 mips64el 12.1.0-2 [70.6 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main mips64el libc6 mips64el 2.33-7 [2564 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main mips64el libaec0 mips64el 1.0.6-1 [20.4 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main mips64el libsz2 mips64el 1.0.6-1 [7448 B] Get:120 http://debian.oregonstate.edu/debian unstable/main mips64el libaec-dev mips64el 1.0.6-1 [20.1 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main mips64el libatomic1 mips64el 12.1.0-2 [7376 B] Get:122 http://debian.oregonstate.edu/debian unstable/main mips64el libgomp1 mips64el 12.1.0-2 [104 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-11-dev mips64el 11.3.0-3 [280 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++6 mips64el 12.1.0-2 [548 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main mips64el linux-libc-dev mips64el 5.17.11-1 [1552 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt1 mips64el 1:4.4.27-1.1 [93.8 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt-dev mips64el 1:4.4.27-1.1 [127 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main mips64el libcom-err2 mips64el 1.46.5-2 [75.4 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main mips64el libkrb5support0 mips64el 1.19.2-2+b2 [63.9 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main mips64el libk5crypto3 mips64el 1.19.2-2+b2 [120 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main mips64el libkeyutils1 mips64el 1.6.1-3 [15.0 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main mips64el libssl3 mips64el 3.0.3-5 [1505 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main mips64el libkrb5-3 mips64el 1.19.2-2+b2 [329 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main mips64el libgssapi-krb5-2 mips64el 1.19.2-2+b2 [151 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main mips64el libtirpc3 mips64el 1.3.2-2 [74.4 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main mips64el libnsl2 mips64el 1.3.0-2 [35.5 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main mips64el libtirpc-dev mips64el 1.3.2-2 [199 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main mips64el libnsl-dev mips64el 1.3.0-2 [70.3 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main mips64el libc6-dev mips64el 2.33-7 [2106 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++-11-dev mips64el 11.3.0-3 [2000 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main mips64el libboost1.74-dev mips64el 1.74.0-15 [9533 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-dev mips64el 1.74.0.3 [4548 B] Get:143 http://debian.oregonstate.edu/debian unstable/main mips64el libbrotli1 mips64el 1.0.9-2+b3 [289 kB] Get:144 http://debian.oregonstate.edu/debian unstable/main mips64el libunistring2 mips64el 1.0-1 [404 kB] Get:145 http://debian.oregonstate.edu/debian unstable/main mips64el libidn2-0 mips64el 2.3.2-2 [94.5 kB] Get:146 http://debian.oregonstate.edu/debian unstable/main mips64el libgmp10 mips64el 2:6.2.1+dfsg-3 [550 kB] Get:147 http://debian.oregonstate.edu/debian unstable/main mips64el libnettle8 mips64el 3.7.3-1 [279 kB] Get:148 http://debian.oregonstate.edu/debian unstable/main mips64el libhogweed6 mips64el 3.7.3-1 [313 kB] Get:149 http://debian.oregonstate.edu/debian unstable/main mips64el libffi8 mips64el 3.4.2-4 [24.0 kB] Get:150 http://debian.oregonstate.edu/debian unstable/main mips64el libp11-kit0 mips64el 0.24.1-1 [289 kB] Get:151 http://debian.oregonstate.edu/debian unstable/main mips64el libtasn1-6 mips64el 4.18.0-4 [53.5 kB] Get:152 http://debian.oregonstate.edu/debian unstable/main mips64el libgnutls30 mips64el 3.7.4-2 [1224 kB] Get:153 http://debian.oregonstate.edu/debian unstable/main mips64el libdb5.3 mips64el 5.3.28+dfsg1-0.9 [598 kB] Get:154 http://debian.oregonstate.edu/debian unstable/main mips64el libsasl2-modules-db mips64el 2.1.28+dfsg-6 [37.8 kB] Get:155 http://debian.oregonstate.edu/debian unstable/main mips64el libsasl2-2 mips64el 2.1.28+dfsg-6 [73.3 kB] Get:156 http://debian.oregonstate.edu/debian unstable/main mips64el libldap-2.5-0 mips64el 2.5.12+dfsg-2 [204 kB] Get:157 http://debian.oregonstate.edu/debian unstable/main mips64el libnghttp2-14 mips64el 1.47.0-1+b1 [72.0 kB] Get:158 http://debian.oregonstate.edu/debian unstable/main mips64el libpsl5 mips64el 0.21.0-1.2 [57.1 kB] Get:159 http://debian.oregonstate.edu/debian unstable/main mips64el zlib1g mips64el 1:1.2.11.dfsg-4 [88.6 kB] Get:160 http://debian.oregonstate.edu/debian unstable/main mips64el librtmp1 mips64el 2.4+20151223.gitfa8646d.1-2+b2 [56.0 kB] Get:161 http://debian.oregonstate.edu/debian unstable/main mips64el libssh2-1 mips64el 1.10.0-3+b1 [170 kB] Get:162 http://debian.oregonstate.edu/debian unstable/main mips64el libzstd1 mips64el 1.5.2+dfsg-1 [262 kB] Get:163 http://debian.oregonstate.edu/debian unstable/main mips64el libcurl4 mips64el 7.83.1-1+b1 [331 kB] Get:164 http://debian.oregonstate.edu/debian unstable/main mips64el libcurl4-openssl-dev mips64el 7.83.1-1+b1 [467 kB] Get:165 http://debian.oregonstate.edu/debian unstable/main mips64el libgatbcore3 mips64el 1.4.2+dfsg-8 [1402 kB] Get:166 http://debian.oregonstate.edu/debian unstable/main mips64el libgatbcore-dev mips64el 1.4.2+dfsg-8 [4467 kB] Get:167 http://debian.oregonstate.edu/debian unstable/main mips64el libgfortran5 mips64el 12.1.0-2 [315 kB] Get:168 http://debian.oregonstate.edu/debian unstable/main mips64el libhdf5-103-1 mips64el 1.10.7+repack-4+b1 [847 kB] Get:169 http://debian.oregonstate.edu/debian unstable/main mips64el libhdf5-cpp-103-1 mips64el 1.10.7+repack-4+b1 [123 kB] Get:170 http://debian.oregonstate.edu/debian unstable/main mips64el libhdf5-fortran-102 mips64el 1.10.7+repack-4+b1 [96.9 kB] Get:171 http://debian.oregonstate.edu/debian unstable/main mips64el libhdf5-hl-100 mips64el 1.10.7+repack-4+b1 [76.8 kB] Get:172 http://debian.oregonstate.edu/debian unstable/main mips64el libhdf5-hl-fortran-100 mips64el 1.10.7+repack-4+b1 [53.8 kB] Get:173 http://debian.oregonstate.edu/debian unstable/main mips64el libhdf5-hl-cpp-100 mips64el 1.10.7+repack-4+b1 [40.5 kB] Get:174 http://debian.oregonstate.edu/debian unstable/main mips64el zlib1g-dev mips64el 1:1.2.11.dfsg-4 [192 kB] Get:175 http://debian.oregonstate.edu/debian unstable/main mips64el libjpeg62-turbo mips64el 1:2.1.2-1 [165 kB] Get:176 http://debian.oregonstate.edu/debian unstable/main mips64el libjpeg62-turbo-dev mips64el 1:2.1.2-1 [293 kB] Get:177 http://debian.oregonstate.edu/debian unstable/main mips64el libjpeg-dev mips64el 1:2.1.2-1 [74.7 kB] Get:178 http://debian.oregonstate.edu/debian unstable/main mips64el libssl-dev mips64el 3.0.3-5 [2318 kB] Get:179 http://debian.oregonstate.edu/debian unstable/main mips64el libhdf5-dev mips64el 1.10.7+repack-4+b1 [2556 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 145 MB in 2s (64.9 MB/s) Selecting previously unselected package perl-modules-5.34. (Reading database ... 10535 files and directories currently installed.) Preparing to unpack .../000-perl-modules-5.34_5.34.0-4_all.deb ... Unpacking perl-modules-5.34 (5.34.0-4) ... Selecting previously unselected package libperl5.34:amd64. Preparing to unpack .../001-libperl5.34_5.34.0-4_amd64.deb ... Unpacking libperl5.34:amd64 (5.34.0-4) ... Selecting previously unselected package perl. Preparing to unpack .../002-perl_5.34.0-4_amd64.deb ... Unpacking perl (5.34.0-4) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../003-liblocale-gettext-perl_1.07-4+b2_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b2) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../004-libncurses6_6.3+20220423-2_amd64.deb ... Unpacking libncurses6:amd64 (6.3+20220423-2) ... Selecting previously unselected package libprocps8:amd64. Preparing to unpack .../005-libprocps8_2%3a3.3.17-7+b1_amd64.deb ... Unpacking libprocps8:amd64 (2:3.3.17-7+b1) ... Selecting previously unselected package procps. Preparing to unpack .../006-procps_2%3a3.3.17-7+b1_amd64.deb ... Unpacking procps (2:3.3.17-7+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../007-sensible-utils_0.0.17_all.deb ... Unpacking sensible-utils (0.0.17) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../008-libmagic-mgc_1%3a5.41-4_amd64.deb ... Unpacking libmagic-mgc (1:5.41-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../009-libmagic1_1%3a5.41-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.41-4) ... Selecting previously unselected package file. Preparing to unpack .../010-file_1%3a5.41-4_amd64.deb ... Unpacking file (1:5.41-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../011-gettext-base_0.21-6_amd64.deb ... Unpacking gettext-base (0.21-6) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../012-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../013-groff-base_1.22.4-8_amd64.deb ... Unpacking groff-base (1.22.4-8) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../014-bsdextrautils_2.38-4_amd64.deb ... Unpacking bsdextrautils (2.38-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../015-libpipeline1_1.5.6-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.6-1) ... Selecting previously unselected package man-db. Preparing to unpack .../016-man-db_2.10.2-1_amd64.deb ... Unpacking man-db (2.10.2-1) ... Selecting previously unselected package ucf. Preparing to unpack .../017-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../018-libsigsegv2_2.14-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.14-1) ... Selecting previously unselected package m4. Preparing to unpack .../019-m4_1.4.18-5_amd64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../020-autoconf_2.71-2_all.deb ... Unpacking autoconf (2.71-2) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../021-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../022-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../023-autopoint_0.21-6_all.deb ... Unpacking autopoint (0.21-6) ... Selecting previously unselected package binutils-mips64el-linux-gnuabi64. Preparing to unpack .../024-binutils-mips64el-linux-gnuabi64_2.38-1cross2_amd64.deb ... Unpacking binutils-mips64el-linux-gnuabi64 (2.38-1cross2) ... Selecting previously unselected package libcrypt-dev:amd64. Preparing to unpack .../025-libcrypt-dev_1%3a4.4.27-1.1_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.27-1.1) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../026-libkrb5support0_1.19.2-2+b2_amd64.deb ... Unpacking libkrb5support0:amd64 (1.19.2-2+b2) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../027-libk5crypto3_1.19.2-2+b2_amd64.deb ... Unpacking libk5crypto3:amd64 (1.19.2-2+b2) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../028-libkeyutils1_1.6.1-3_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.1-3) ... Selecting previously unselected package libssl3:amd64. Preparing to unpack .../029-libssl3_3.0.3-5_amd64.deb ... Unpacking libssl3:amd64 (3.0.3-5) ... Selecting previously unselected package libkrb5-3:amd64. 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Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.13.0-1) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up libc6-dev:amd64 (2.33-7) ... Setting up libtool (2.4.7-4) ... Setting up dh-autoreconf (20) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libstdc++-11-dev:amd64 (11.3.0-3) ... Setting up g++-11 (11.3.0-3) ... Setting up debhelper (13.7.1) ... Setting up libconfig-auto-perl (0.44-1.1) ... Setting up g++ (4:11.2.0-2) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up build-essential (12.9) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu2) ... Setting up dpkg-cross (2.6.18+nmu2) ... Setting up crossbuild-essential-mips64el (12.9) ... Setting up libgcc-s1:mips64el (12.1.0-2) ... Setting up libc6:mips64el (2.33-7) ... Setting up libffi8:mips64el (3.4.2-4) ... Setting up libtasn1-6:mips64el (4.18.0-4) ... Setting up libdb5.3:mips64el (5.3.28+dfsg1-0.9) ... Setting up libstdc++6:mips64el (12.1.0-2) ... Setting up libzstd1:mips64el (1.5.2+dfsg-1) ... Setting up libkeyutils1:mips64el (1.6.1-3) ... Setting up libbrotli1:mips64el (1.0.9-2+b3) ... Setting up libssl3:mips64el (3.0.3-5) ... Setting up libnghttp2-14:mips64el (1.47.0-1+b1) ... Setting up libunistring2:mips64el (1.0-1) ... Setting up zlib1g:mips64el (1:1.2.11.dfsg-4) ... Setting up libcrypt1:mips64el (1:4.4.27-1.1) ... Setting up libidn2-0:mips64el (2.3.2-2) ... Setting up libcom-err2:mips64el (1.46.5-2) ... Setting up libgomp1:mips64el (12.1.0-2) ... Setting up libaec0:mips64el (1.0.6-1) ... Setting up libkrb5support0:mips64el (1.19.2-2+b2) ... Setting up libsasl2-modules-db:mips64el (2.1.28+dfsg-6) ... Setting up libjpeg62-turbo:mips64el (1:2.1.2-1) ... Setting up libnettle8:mips64el (3.7.3-1) ... Setting up libgmp10:mips64el (2:6.2.1+dfsg-3) ... Setting up libp11-kit0:mips64el (0.24.1-1) ... Setting up libssl-dev:mips64el (3.0.3-5) ... Setting up libatomic1:mips64el (12.1.0-2) ... Setting up libk5crypto3:mips64el (1.19.2-2+b2) ... Setting up libsasl2-2:mips64el (2.1.28+dfsg-6) ... Setting up libgfortran5:mips64el (12.1.0-2) ... Setting up libgatbcore3:mips64el (1.4.2+dfsg-8) ... Setting up libgcc-11-dev:mips64el (11.3.0-3) ... Setting up libcrypt-dev:mips64el (1:4.4.27-1.1) ... Setting up libssh2-1:mips64el (1.10.0-3+b1) ... Setting up libkrb5-3:mips64el (1.19.2-2+b2) ... Setting up libsz2:mips64el (1.0.6-1) ... Setting up libpsl5:mips64el (0.21.0-1.2) ... Setting up libhogweed6:mips64el (3.7.3-1) ... Setting up libaec-dev:mips64el (1.0.6-1) ... Setting up libgnutls30:mips64el (3.7.4-2) ... Setting up librtmp1:mips64el (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libgssapi-krb5-2:mips64el (1.19.2-2+b2) ... Setting up libgatbcore-dev:mips64el (1.4.2+dfsg-8) ... Setting up libtirpc3:mips64el (1.3.2-2) ... Setting up libldap-2.5-0:mips64el (2.5.12+dfsg-2) ... Setting up libtirpc-dev:mips64el (1.3.2-2) ... Setting up libnsl2:mips64el (1.3.0-2) ... Setting up libcurl4:mips64el (7.83.1-1+b1) ... Setting up libcurl4-openssl-dev:mips64el (7.83.1-1+b1) ... Setting up libhdf5-103-1:mips64el (1.10.7+repack-4+b1) ... Setting up libnsl-dev:mips64el (1.3.0-2) ... Setting up libhdf5-cpp-103-1:mips64el (1.10.7+repack-4+b1) ... Setting up libc6-dev:mips64el (2.33-7) ... Setting up libhdf5-hl-100:mips64el (1.10.7+repack-4+b1) ... Setting up libhdf5-hl-cpp-100:mips64el (1.10.7+repack-4+b1) ... Setting up libjpeg62-turbo-dev:mips64el (1:2.1.2-1) ... Setting up libhdf5-fortran-102:mips64el (1.10.7+repack-4+b1) ... Setting up libstdc++-11-dev:mips64el (11.3.0-3) ... Setting up zlib1g-dev:mips64el (1:1.2.11.dfsg-4) ... Setting up libhdf5-hl-fortran-100:mips64el (1.10.7+repack-4+b1) ... Setting up libboost1.74-dev:mips64el (1.74.0-15) ... Setting up libjpeg-dev:mips64el (1:2.1.2-1) ... Setting up libhdf5-dev:mips64el (1.10.7+repack-4+b1) ... update-alternatives: using /usr/lib/mips64el-linux-gnuabi64/pkgconfig/hdf5-serial.pc to provide /usr/lib/mips64el-linux-gnuabi64/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libboost-dev:mips64el (1.74.0.3) ... Setting up sbuild-build-depends-main-dummy:mips64el (0.invalid.0) ... Processing triggers for libc-bin (2.33-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mips64el included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-17-amd64 #1 SMP Debian 4.19.194-3 (2021-07-18) amd64 (x86_64) Toolchain package versions: binutils_2.38-4 dpkg-dev_1.21.8 g++-11_11.3.0-3 gcc-11_11.3.0-3 libc6-dev_2.33-7 libstdc++-11-dev_11.3.0-3 libstdc++-11-dev-mips64el-cross_11.2.0-18cross2 libstdc++6_12.1.0-2 libstdc++6-mips64el-cross_12-20220319-1cross2 linux-libc-dev_5.17.11-1 Package versions: adduser_3.121 apt_2.5.0 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-6 autotools-dev_20220109.1 base-files_12.2 base-passwd_3.5.52 bash_5.1-6.1 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mindthegap in /<> dpkg-source: info: unpacking mindthegap_2.3.0.orig.tar.gz dpkg-source: info: unpacking mindthegap_2.3.0-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_gatb-core.patch dpkg-source: info: applying remove_unnecessary_installs.patch dpkg-source: info: applying modify_tests_for_autopkgtest.patch dpkg-source: info: applying 2to3.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mips64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-f7bfa82e-f800-46fe-a1c5-eb685bce7c48 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -amips64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package mindthegap dpkg-buildpackage: info: source version 2.3.0-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-architecture: warning: specified GNU system type mips64el-linux-gnuabi64 does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mips64el debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a cd obj-mips64el-linux-gnuabi64 && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=mips64 -DCMAKE_C_COMPILER=mips64el-linux-gnuabi64-gcc -DCMAKE_CXX_COMPILER=mips64el-linux-gnuabi64-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/mips64el-linux-gnuabi64-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/mips64el-linux-gnuabi64-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/mips64el-linux-gnuabi64-qmake -DCMAKE_INSTALL_LIBDIR=lib/mips64el-linux-gnuabi64 .. CMake Warning (dev) at CMakeLists.txt:142: Syntax Warning in cmake code at column 42 Argument not separated from preceding token by whitespace. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:147: Syntax Warning in cmake code at column 38 Argument not separated from preceding token by whitespace. This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is GNU 11.2.0 -- The CXX compiler identification is GNU 11.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/mips64el-linux-gnuabi64-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/mips64el-linux-gnuabi64-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- cxx: -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_FIND_USE_PACKAGE_REGISTRY PKGCONFIG_EXECUTABLE PKG_CONFIG_EXECUTABLE QMAKE_EXECUTABLE -- Build files have been written to: /<>/obj-mips64el-linux-gnuabi64 dh_auto_build -a cd obj-mips64el-linux-gnuabi64 && make -j1 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' /usr/bin/cmake -S/<> -B/<>/obj-mips64el-linux-gnuabi64 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-mips64el-linux-gnuabi64/CMakeFiles /<>/obj-mips64el-linux-gnuabi64//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' make -f CMakeFiles/MindTheGap.dir/build.make CMakeFiles/MindTheGap.dir/depend make[3]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' cd /<>/obj-mips64el-linux-gnuabi64 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-mips64el-linux-gnuabi64 /<>/obj-mips64el-linux-gnuabi64 /<>/obj-mips64el-linux-gnuabi64/CMakeFiles/MindTheGap.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' make -f CMakeFiles/MindTheGap.dir/build.make CMakeFiles/MindTheGap.dir/build make[3]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' [ 10%] Building CXX object CMakeFiles/MindTheGap.dir/src/main.cpp.o /usr/bin/mips64el-linux-gnuabi64-g++ -I/<>/src -I"/<>/src/*" -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/MindTheGap.dir/src/main.cpp.o -MF CMakeFiles/MindTheGap.dir/src/main.cpp.o.d -o CMakeFiles/MindTheGap.dir/src/main.cpp.o -c /<>/src/main.cpp [ 20%] Building CXX object CMakeFiles/MindTheGap.dir/src/Filler.cpp.o /usr/bin/mips64el-linux-gnuabi64-g++ -I/<>/src -I"/<>/src/*" -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/MindTheGap.dir/src/Filler.cpp.o -MF CMakeFiles/MindTheGap.dir/src/Filler.cpp.o.d -o CMakeFiles/MindTheGap.dir/src/Filler.cpp.o -c /<>/src/Filler.cpp /<>/src/Filler.cpp: In member function ‘void Filler::writeFilledBreakpoint(std::vector&, std::string, std::string)’: /<>/src/Filler.cpp:1052:65: warning: format ‘%f’ expects argument of type ‘double’, but argument 6 has type ‘const char*’ [-Wformat=] 1052 | fprintf(_insert_file,">%s_len_%d_qual_%i_avg_cov_%.2f_median_cov_%.2f %s\n", | ~~~^ | | | double | %.2s 1053 | seedName.c_str(),llen,it->qual,solu_i.c_str() | ~~~~~~~~~~~~~~ | | | const char* /<>/src/Filler.cpp:1052:86: warning: format ‘%s’ expects argument of type ‘char*’, but argument 8 has type ‘double’ [-Wformat=] 1052 | fprintf(_insert_file,">%s_len_%d_qual_%i_avg_cov_%.2f_median_cov_%.2f %s\n", | ~^ | | | char* | %f 1053 | seedName.c_str(),llen,it->qual,solu_i.c_str() 1054 | ,it->avg_coverage,it->median_coverage); | ~~~~~~~~~~~~~~~~~~~ | | | double [ 30%] Building CXX object CMakeFiles/MindTheGap.dir/src/Finder.cpp.o /usr/bin/mips64el-linux-gnuabi64-g++ -I/<>/src -I"/<>/src/*" -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/MindTheGap.dir/src/Finder.cpp.o -MF CMakeFiles/MindTheGap.dir/src/Finder.cpp.o.d -o CMakeFiles/MindTheGap.dir/src/Finder.cpp.o -c /<>/src/Finder.cpp In file included from /<>/src/Finder.cpp:22: /<>/src/FindBreakpoints.hpp: In instantiation of ‘void FindBreakpoints::writeIndel(int, std::string&, uint64_t, std::string, std::string, int, std::string) [with long unsigned int span = 128; std::string = std::__cxx11::basic_string; uint64_t = long unsigned int]’: /<>/src/FindHeteroInsertion.hpp:119:30: required from ‘bool FindHeteroInsertion::update() [with long unsigned int span = 128]’ /<>/src/FindHeteroInsertion.hpp:48:6: required from here /<>/src/FindBreakpoints.hpp:693:46: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 4 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 693 | fprintf(this->finder->_vcf_file, "%s\t%lli\tbkpt%i\t%s\t%s\t.\tPASS\tTYPE=INS;LEN=%i;FUZZY=%i\tGT\t%s\n", | ~~~^ | | | long long int | %li 694 | chrom_name.c_str(), 695 | position + 1, //switch to 1-based | ~~~~~~~~~~~~ | | | uint64_t {aka long unsigned int} /<>/src/FindBreakpoints.hpp: In instantiation of ‘void FindBreakpoints::writeBreakpoint(int, std::string&, uint64_t, std::string&, std::string&, int, std::string, bool, bool) [with long unsigned int span = 128; std::string = std::__cxx11::basic_string; uint64_t = long unsigned int]’: /<>/src/FindHeteroInsertion.hpp:145:57: required from ‘bool FindHeteroInsertion::update() [with long unsigned int span = 128]’ /<>/src/FindHeteroInsertion.hpp:48:6: required from here /<>/src/FindBreakpoints.hpp:642:63: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 5 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 642 | fprintf(this->finder->_breakpoint_file,">bkpt%i_%s_pos_%lli_fuzzy_%i_%s %s left_kmer\n%s\n>bkpt%i_%s_pos_%lli_fuzzy_%i_%s %s right_kmer\n%s\n", | ~~~^ | | | long long int | %li ...... 645 | position+1, //switch to 1-based | ~~~~~~~~~~ | | | uint64_t {aka long unsigned int} /<>/src/FindBreakpoints.hpp:642:113: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 12 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 642 | fprintf(this->finder->_breakpoint_file,">bkpt%i_%s_pos_%lli_fuzzy_%i_%s %s left_kmer\n%s\n>bkpt%i_%s_pos_%lli_fuzzy_%i_%s %s right_kmer\n%s\n", | ~~~^ | | | long long int | %li ...... 652 | position+1, //switch to 1-based | ~~~~~~~~~~ | | | uint64_t {aka long unsigned int} /<>/src/FindBreakpoints.hpp: In instantiation of ‘void FindBreakpoints::writeVcfVariant(int, std::string&, uint64_t, char*, char*, int, std::string) [with long unsigned int span = 128; std::string = std::__cxx11::basic_string; uint64_t = long unsigned int]’: /<>/src/FindDeletion.hpp:158:30: required from ‘bool FindDeletion::update() [with long unsigned int span = 128]’ /<>/src/FindDeletion.hpp:62:6: required from here /<>/src/FindBreakpoints.hpp:668:49: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 4 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 668 | fprintf(this->finder->_vcf_file,"%s\t%lli\tbkpt%i\t%s\t%s\t.\tPASS\tTYPE=%s;LEN=%i;FUZZY=%i\tGT\t1/1\n", | ~~~^ | | | long long int | %li 669 | chrom_name.c_str(), 670 | position+1, //switch to 1-based | ~~~~~~~~~~ | | | uint64_t {aka long unsigned int} /<>/src/FindBreakpoints.hpp: In instantiation of ‘void FindBreakpoints::writeIndel(int, std::string&, uint64_t, std::string, std::string, int, std::string) [with long unsigned int span = 96; std::string = std::__cxx11::basic_string; uint64_t = long unsigned int]’: /<>/src/FindHeteroInsertion.hpp:119:30: required from ‘bool FindHeteroInsertion::update() [with long unsigned int span = 96]’ /<>/src/FindHeteroInsertion.hpp:48:6: required from here /<>/src/FindBreakpoints.hpp:693:46: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 4 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 693 | fprintf(this->finder->_vcf_file, "%s\t%lli\tbkpt%i\t%s\t%s\t.\tPASS\tTYPE=INS;LEN=%i;FUZZY=%i\tGT\t%s\n", | ~~~^ | | | long long int | %li 694 | chrom_name.c_str(), 695 | position + 1, //switch to 1-based | ~~~~~~~~~~~~ | | | uint64_t {aka long unsigned int} /<>/src/FindBreakpoints.hpp: In instantiation of ‘void FindBreakpoints::writeBreakpoint(int, std::string&, uint64_t, std::string&, std::string&, int, std::string, bool, bool) [with long unsigned int span = 96; std::string = std::__cxx11::basic_string; uint64_t = long unsigned int]’: /<>/src/FindHeteroInsertion.hpp:145:57: required from ‘bool FindHeteroInsertion::update() [with long unsigned int span = 96]’ /<>/src/FindHeteroInsertion.hpp:48:6: required from here /<>/src/FindBreakpoints.hpp:642:63: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 5 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 642 | fprintf(this->finder->_breakpoint_file,">bkpt%i_%s_pos_%lli_fuzzy_%i_%s %s left_kmer\n%s\n>bkpt%i_%s_pos_%lli_fuzzy_%i_%s %s right_kmer\n%s\n", | ~~~^ | | | long long int | %li ...... 645 | position+1, //switch to 1-based | ~~~~~~~~~~ | | | uint64_t {aka long unsigned int} /<>/src/FindBreakpoints.hpp:642:113: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 12 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 642 | fprintf(this->finder->_breakpoint_file,">bkpt%i_%s_pos_%lli_fuzzy_%i_%s %s left_kmer\n%s\n>bkpt%i_%s_pos_%lli_fuzzy_%i_%s %s right_kmer\n%s\n", | ~~~^ | | | long long int | %li ...... 652 | position+1, //switch to 1-based | ~~~~~~~~~~ | | | uint64_t {aka long unsigned int} /<>/src/FindBreakpoints.hpp: In instantiation of ‘void FindBreakpoints::writeVcfVariant(int, std::string&, uint64_t, char*, char*, int, std::string) [with long unsigned int span = 96; std::string = std::__cxx11::basic_string; uint64_t = long unsigned int]’: /<>/src/FindDeletion.hpp:158:30: required from ‘bool FindDeletion::update() [with long unsigned int span = 96]’ /<>/src/FindDeletion.hpp:62:6: required from here /<>/src/FindBreakpoints.hpp:668:49: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 4 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 668 | fprintf(this->finder->_vcf_file,"%s\t%lli\tbkpt%i\t%s\t%s\t.\tPASS\tTYPE=%s;LEN=%i;FUZZY=%i\tGT\t1/1\n", | ~~~^ | | | long long int | %li 669 | chrom_name.c_str(), 670 | position+1, //switch to 1-based | ~~~~~~~~~~ | | | uint64_t {aka long unsigned int} /<>/src/FindBreakpoints.hpp: In instantiation of ‘void FindBreakpoints::writeIndel(int, std::string&, uint64_t, std::string, std::string, int, std::string) [with long unsigned int span = 64; std::string = std::__cxx11::basic_string; uint64_t = long unsigned int]’: /<>/src/FindHeteroInsertion.hpp:119:30: required from ‘bool FindHeteroInsertion::update() [with long unsigned int span = 64]’ /<>/src/FindHeteroInsertion.hpp:48:6: required from here /<>/src/FindBreakpoints.hpp:693:46: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 4 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 693 | fprintf(this->finder->_vcf_file, "%s\t%lli\tbkpt%i\t%s\t%s\t.\tPASS\tTYPE=INS;LEN=%i;FUZZY=%i\tGT\t%s\n", | ~~~^ | | | long long int | %li 694 | chrom_name.c_str(), 695 | position + 1, //switch to 1-based | ~~~~~~~~~~~~ | | | uint64_t {aka long unsigned int} /<>/src/FindBreakpoints.hpp: In instantiation of ‘void FindBreakpoints::writeBreakpoint(int, std::string&, uint64_t, std::string&, std::string&, int, std::string, bool, bool) [with long unsigned int span = 64; std::string = std::__cxx11::basic_string; uint64_t = long unsigned int]’: /<>/src/FindHeteroInsertion.hpp:145:57: required from ‘bool FindHeteroInsertion::update() [with long unsigned int span = 64]’ /<>/src/FindHeteroInsertion.hpp:48:6: required from here /<>/src/FindBreakpoints.hpp:642:63: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 5 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 642 | fprintf(this->finder->_breakpoint_file,">bkpt%i_%s_pos_%lli_fuzzy_%i_%s %s left_kmer\n%s\n>bkpt%i_%s_pos_%lli_fuzzy_%i_%s %s right_kmer\n%s\n", | ~~~^ | | | long long int | %li ...... 645 | position+1, //switch to 1-based | ~~~~~~~~~~ | | | uint64_t {aka long unsigned int} /<>/src/FindBreakpoints.hpp:642:113: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 12 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 642 | fprintf(this->finder->_breakpoint_file,">bkpt%i_%s_pos_%lli_fuzzy_%i_%s %s left_kmer\n%s\n>bkpt%i_%s_pos_%lli_fuzzy_%i_%s %s right_kmer\n%s\n", | ~~~^ | | | long long int | %li ...... 652 | position+1, //switch to 1-based | ~~~~~~~~~~ | | | uint64_t {aka long unsigned int} /<>/src/FindBreakpoints.hpp: In instantiation of ‘void FindBreakpoints::writeVcfVariant(int, std::string&, uint64_t, char*, char*, int, std::string) [with long unsigned int span = 64; std::string = std::__cxx11::basic_string; uint64_t = long unsigned int]’: /<>/src/FindDeletion.hpp:158:30: required from ‘bool FindDeletion::update() [with long unsigned int span = 64]’ /<>/src/FindDeletion.hpp:62:6: required from here /<>/src/FindBreakpoints.hpp:668:49: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 4 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 668 | fprintf(this->finder->_vcf_file,"%s\t%lli\tbkpt%i\t%s\t%s\t.\tPASS\tTYPE=%s;LEN=%i;FUZZY=%i\tGT\t1/1\n", | ~~~^ | | | long long int | %li 669 | chrom_name.c_str(), 670 | position+1, //switch to 1-based | ~~~~~~~~~~ | | | uint64_t {aka long unsigned int} /<>/src/FindBreakpoints.hpp: In instantiation of ‘void FindBreakpoints::writeIndel(int, std::string&, uint64_t, std::string, std::string, int, std::string) [with long unsigned int span = 32; std::string = std::__cxx11::basic_string; uint64_t = long unsigned int]’: /<>/src/FindHeteroInsertion.hpp:119:30: required from ‘bool FindHeteroInsertion::update() [with long unsigned int span = 32]’ /<>/src/FindHeteroInsertion.hpp:48:6: required from here /<>/src/FindBreakpoints.hpp:693:46: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 4 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 693 | fprintf(this->finder->_vcf_file, "%s\t%lli\tbkpt%i\t%s\t%s\t.\tPASS\tTYPE=INS;LEN=%i;FUZZY=%i\tGT\t%s\n", | ~~~^ | | | long long int | %li 694 | chrom_name.c_str(), 695 | position + 1, //switch to 1-based | ~~~~~~~~~~~~ | | | uint64_t {aka long unsigned int} /<>/src/FindBreakpoints.hpp: In instantiation of ‘void FindBreakpoints::writeBreakpoint(int, std::string&, uint64_t, std::string&, std::string&, int, std::string, bool, bool) [with long unsigned int span = 32; std::string = std::__cxx11::basic_string; uint64_t = long unsigned int]’: /<>/src/FindHeteroInsertion.hpp:145:57: required from ‘bool FindHeteroInsertion::update() [with long unsigned int span = 32]’ /<>/src/FindHeteroInsertion.hpp:48:6: required from here /<>/src/FindBreakpoints.hpp:642:63: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 5 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 642 | fprintf(this->finder->_breakpoint_file,">bkpt%i_%s_pos_%lli_fuzzy_%i_%s %s left_kmer\n%s\n>bkpt%i_%s_pos_%lli_fuzzy_%i_%s %s right_kmer\n%s\n", | ~~~^ | | | long long int | %li ...... 645 | position+1, //switch to 1-based | ~~~~~~~~~~ | | | uint64_t {aka long unsigned int} /<>/src/FindBreakpoints.hpp:642:113: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 12 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 642 | fprintf(this->finder->_breakpoint_file,">bkpt%i_%s_pos_%lli_fuzzy_%i_%s %s left_kmer\n%s\n>bkpt%i_%s_pos_%lli_fuzzy_%i_%s %s right_kmer\n%s\n", | ~~~^ | | | long long int | %li ...... 652 | position+1, //switch to 1-based | ~~~~~~~~~~ | | | uint64_t {aka long unsigned int} /<>/src/FindBreakpoints.hpp: In instantiation of ‘void FindBreakpoints::writeVcfVariant(int, std::string&, uint64_t, char*, char*, int, std::string) [with long unsigned int span = 32; std::string = std::__cxx11::basic_string; uint64_t = long unsigned int]’: /<>/src/FindDeletion.hpp:158:30: required from ‘bool FindDeletion::update() [with long unsigned int span = 32]’ /<>/src/FindDeletion.hpp:62:6: required from here /<>/src/FindBreakpoints.hpp:668:49: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 4 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 668 | fprintf(this->finder->_vcf_file,"%s\t%lli\tbkpt%i\t%s\t%s\t.\tPASS\tTYPE=%s;LEN=%i;FUZZY=%i\tGT\t1/1\n", | ~~~^ | | | long long int | %li 669 | chrom_name.c_str(), 670 | position+1, //switch to 1-based | ~~~~~~~~~~ | | | uint64_t {aka long unsigned int} [ 40%] Building CXX object CMakeFiles/MindTheGap.dir/src/GraphAnalysis.cpp.o /usr/bin/mips64el-linux-gnuabi64-g++ -I/<>/src -I"/<>/src/*" -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/MindTheGap.dir/src/GraphAnalysis.cpp.o -MF CMakeFiles/MindTheGap.dir/src/GraphAnalysis.cpp.o.d -o CMakeFiles/MindTheGap.dir/src/GraphAnalysis.cpp.o -c /<>/src/GraphAnalysis.cpp [ 50%] Building CXX object CMakeFiles/MindTheGap.dir/src/GraphOutputDot.cpp.o /usr/bin/mips64el-linux-gnuabi64-g++ -I/<>/src -I"/<>/src/*" -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/MindTheGap.dir/src/GraphOutputDot.cpp.o -MF CMakeFiles/MindTheGap.dir/src/GraphOutputDot.cpp.o.d -o CMakeFiles/MindTheGap.dir/src/GraphOutputDot.cpp.o -c /<>/src/GraphOutputDot.cpp [ 60%] Building CXX object CMakeFiles/MindTheGap.dir/src/IGraphOutput.cpp.o /usr/bin/mips64el-linux-gnuabi64-g++ -I/<>/src -I"/<>/src/*" -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/MindTheGap.dir/src/IGraphOutput.cpp.o -MF CMakeFiles/MindTheGap.dir/src/IGraphOutput.cpp.o.d -o CMakeFiles/MindTheGap.dir/src/IGraphOutput.cpp.o -c /<>/src/IGraphOutput.cpp [ 70%] Building CXX object CMakeFiles/MindTheGap.dir/src/Utils.cpp.o /usr/bin/mips64el-linux-gnuabi64-g++ -I/<>/src -I"/<>/src/*" -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/MindTheGap.dir/src/Utils.cpp.o -MF CMakeFiles/MindTheGap.dir/src/Utils.cpp.o.d -o CMakeFiles/MindTheGap.dir/src/Utils.cpp.o -c /<>/src/Utils.cpp [ 80%] Linking CXX executable bin/MindTheGap /usr/bin/cmake -E cmake_link_script CMakeFiles/MindTheGap.dir/link.txt --verbose=1 /usr/bin/mips64el-linux-gnuabi64-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/MindTheGap.dir/src/main.cpp.o CMakeFiles/MindTheGap.dir/src/Filler.cpp.o CMakeFiles/MindTheGap.dir/src/Finder.cpp.o CMakeFiles/MindTheGap.dir/src/GraphAnalysis.cpp.o CMakeFiles/MindTheGap.dir/src/GraphOutputDot.cpp.o CMakeFiles/MindTheGap.dir/src/IGraphOutput.cpp.o CMakeFiles/MindTheGap.dir/src/Utils.cpp.o -o bin/MindTheGap -L/usr/lib/mips64el-linux-gnuabi64/hdf5/serial -Wl,-rpath,/usr/lib/mips64el-linux-gnuabi64/hdf5/serial: -lgatbcore -lhdf5 make[3]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' [ 80%] Built target MindTheGap make -f CMakeFiles/nwalign.dir/build.make CMakeFiles/nwalign.dir/depend make[3]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' cd /<>/obj-mips64el-linux-gnuabi64 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-mips64el-linux-gnuabi64 /<>/obj-mips64el-linux-gnuabi64 /<>/obj-mips64el-linux-gnuabi64/CMakeFiles/nwalign.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' make -f CMakeFiles/nwalign.dir/build.make CMakeFiles/nwalign.dir/build make[3]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' [ 90%] Building CXX object CMakeFiles/nwalign.dir/src/nwAlign/nwalign.cpp.o /usr/bin/mips64el-linux-gnuabi64-g++ -I/<>/src -I"/<>/src/*" -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/nwalign.dir/src/nwAlign/nwalign.cpp.o -MF CMakeFiles/nwalign.dir/src/nwAlign/nwalign.cpp.o.d -o CMakeFiles/nwalign.dir/src/nwAlign/nwalign.cpp.o -c /<>/src/nwAlign/nwalign.cpp [100%] Linking CXX executable bin/nwalign /usr/bin/cmake -E cmake_link_script CMakeFiles/nwalign.dir/link.txt --verbose=1 /usr/bin/mips64el-linux-gnuabi64-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/nwalign.dir/src/nwAlign/nwalign.cpp.o -o bin/nwalign -L/usr/lib/mips64el-linux-gnuabi64/hdf5/serial -Wl,-rpath,/usr/lib/mips64el-linux-gnuabi64/hdf5/serial -lgatbcore -lhdf5 make[3]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' [100%] Built target nwalign make[2]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' /usr/bin/cmake -E cmake_progress_start /<>/obj-mips64el-linux-gnuabi64/CMakeFiles 0 make[1]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install -a cd obj-mips64el-linux-gnuabi64 && make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' /usr/bin/cmake -S/<> -B/<>/obj-mips64el-linux-gnuabi64 --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /<>/debian/tmp/usr/bin/MindTheGap -- Set runtime path of "/<>/debian/tmp/usr/bin/MindTheGap" to "" make[1]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/mindthegap/usr/bin/MindTheGap was not linked against libhdf5_serial.so.103 (it uses none of the library's symbols) dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'mindthegap' in '../mindthegap_2.3.0-1_mips64el.deb'. dpkg-deb: building package 'mindthegap-dbgsym' in '../mindthegap-dbgsym_2.3.0-1_mips64el.deb'. dpkg-genbuildinfo --build=any -O../mindthegap_2.3.0-1_mips64el.buildinfo dpkg-genchanges --build=any -O../mindthegap_2.3.0-1_mips64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2022-06-01T00:20:39Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ mindthegap_2.3.0-1_mips64el.changes: ------------------------------------ Format: 1.8 Date: Sun, 29 May 2022 11:15:45 +0530 Source: mindthegap Binary: mindthegap mindthegap-dbgsym Built-For-Profiles: cross nocheck Architecture: mips64el Version: 2.3.0-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: mindthegap - performs detection and assembly of DNA insertion variants in NGS Changes: mindthegap (2.3.0-1) unstable; urgency=medium . * Team upload. * New upstream version 2.3.0 * Bump Standards-Version to 4.6.1 (no changes needed) Checksums-Sha1: ac60fc21c1080aada03795f0e81637a34483b978 3412752 mindthegap-dbgsym_2.3.0-1_mips64el.deb ffd8b34c21736394a7dc66edf6bd17fab9c316ca 6521 mindthegap_2.3.0-1_mips64el.buildinfo 78cec0f82853ef7ccc816999aa07398974aea240 201992 mindthegap_2.3.0-1_mips64el.deb Checksums-Sha256: 38d112fc26a9dc09bb7d85ac04090ca778b4bac96cbcebd1cb1289f7ba9756e6 3412752 mindthegap-dbgsym_2.3.0-1_mips64el.deb 0c521df40559a2620ee7b0c689eb0a3f4330d3a8117988143b2aea39145539f1 6521 mindthegap_2.3.0-1_mips64el.buildinfo 5e255d65f85584f28ed1e49fd502153db5bbf7cd473201af303b15041fe68efd 201992 mindthegap_2.3.0-1_mips64el.deb Files: df7ccc3e0916c1374181e439f84cf52c 3412752 debug optional mindthegap-dbgsym_2.3.0-1_mips64el.deb f2fcc8d70bbc918f04115b63461fb76e 6521 science optional mindthegap_2.3.0-1_mips64el.buildinfo e624ea6a236f40049542a71f4ce26e0b 201992 science optional mindthegap_2.3.0-1_mips64el.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: mindthegap Binary: mindthegap mindthegap-dbgsym Architecture: mips64el Version: 2.3.0-1 Checksums-Md5: df7ccc3e0916c1374181e439f84cf52c 3412752 mindthegap-dbgsym_2.3.0-1_mips64el.deb e624ea6a236f40049542a71f4ce26e0b 201992 mindthegap_2.3.0-1_mips64el.deb Checksums-Sha1: ac60fc21c1080aada03795f0e81637a34483b978 3412752 mindthegap-dbgsym_2.3.0-1_mips64el.deb 78cec0f82853ef7ccc816999aa07398974aea240 201992 mindthegap_2.3.0-1_mips64el.deb Checksums-Sha256: 38d112fc26a9dc09bb7d85ac04090ca778b4bac96cbcebd1cb1289f7ba9756e6 3412752 mindthegap-dbgsym_2.3.0-1_mips64el.deb 5e255d65f85584f28ed1e49fd502153db5bbf7cd473201af303b15041fe68efd 201992 mindthegap_2.3.0-1_mips64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Wed, 01 Jun 2022 00:20:39 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.71-2), automake (= 1:1.16.5-1.3), autopoint (= 0.21-6), autotools-dev (= 20220109.1), base-files (= 12.2), base-passwd (= 3.5.52), bash (= 5.1-6.1), binutils (= 2.38-4), binutils-common (= 2.38-4), binutils-x86-64-linux-gnu (= 2.38-4), bsdextrautils (= 2.38-4), bsdutils (= 1:2.38-4), build-essential (= 12.9), bzip2 (= 1.0.8-5), cmake (= 3.23.2-1), cmake-data (= 3.23.2-1), coreutils (= 8.32-4.1), cpp (= 4:11.2.0-2), cpp-11 (= 11.3.0-3), dash (= 0.5.11+git20210903+057cd650a4ed-8), debconf (= 1.5.79), debhelper (= 13.7.1), debianutils (= 5.7-0.2), dh-autoreconf (= 20), dh-elpa-helper (= 2.0.10), dh-strip-nondeterminism (= 1.13.0-1), diffutils (= 1:3.7-5), dpkg (= 1.21.8), dpkg-dev (= 1.21.8), dwz (= 0.14-1), emacsen-common (= 3.0.4), file (= 1:5.41-4), findutils (= 4.9.0-3), g++ (= 4:11.2.0-2), g++-11 (= 11.3.0-3), gcc (= 4:11.2.0-2), gcc-11 (= 11.3.0-3), gcc-11-base (= 11.3.0-3), gcc-12-base (= 12.1.0-2), gettext (= 0.21-6), gettext-base (= 0.21-6), grep (= 3.7-1), groff-base (= 1.22.4-8), gzip (= 1.12-1), hdf5-helpers (= 1.10.7+repack-4+b1), hostname (= 3.23), init-system-helpers (= 1.63), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.3.1-1), libaec-dev (= 1.0.6-1), libaec0 (= 1.0.6-1), libarchive-zip-perl (= 1.68-1), libarchive13 (= 3.6.0-1), libasan6 (= 11.3.0-3), libatomic1 (= 12.1.0-2), libattr1 (= 1:2.5.1-1), libaudit-common (= 1:3.0.7-1), libaudit1 (= 1:3.0.7-1+b1), libbinutils (= 2.38-4), libblkid1 (= 2.38-4), libboost-dev (= 1.74.0.3), libboost1.74-dev (= 1.74.0-15), libbrotli1 (= 1.0.9-2+b3), libbz2-1.0 (= 1.0.8-5), libc-bin (= 2.33-7), libc-dev-bin (= 2.33-7), libc6 (= 2.33-7), libc6-dev (= 2.33-7), libcap-ng0 (= 0.7.9-2.2+b2), libcap2 (= 1:2.44-1), libcc1-0 (= 12.1.0-2), libcom-err2 (= 1.46.5-2), libcrypt-dev (= 1:4.4.27-1.1), libcrypt1 (= 1:4.4.27-1.1), libctf-nobfd0 (= 2.38-4), libctf0 (= 2.38-4), libcurl4 (= 7.83.1-1+b1), libcurl4-openssl-dev (= 7.83.1-1+b1), libdb5.3 (= 5.3.28+dfsg1-0.9), libdebconfclient0 (= 0.262), libdebhelper-perl (= 13.7.1), libdpkg-perl (= 1.21.8), libelf1 (= 0.187-1), libexpat1 (= 2.4.8-1), libffi8 (= 3.4.2-4), libfile-stripnondeterminism-perl (= 1.13.0-1), libgatbcore-dev (= 1.4.2+dfsg-8), libgatbcore3 (= 1.4.2+dfsg-8), libgcc-11-dev (= 11.3.0-3), libgcc-s1 (= 12.1.0-2), libgcrypt20 (= 1.10.1-2), libgdbm-compat4 (= 1.23-1), libgdbm6 (= 1.23-1), libgfortran5 (= 12.1.0-2), libgmp10 (= 2:6.2.1+dfsg-3), libgnutls30 (= 3.7.4-2), libgomp1 (= 12.1.0-2), libgpg-error0 (= 1.45-2), libgssapi-krb5-2 (= 1.19.2-2+b2), libhdf5-103-1 (= 1.10.7+repack-4+b1), libhdf5-cpp-103-1 (= 1.10.7+repack-4+b1), libhdf5-dev (= 1.10.7+repack-4+b1), libhdf5-fortran-102 (= 1.10.7+repack-4+b1), libhdf5-hl-100 (= 1.10.7+repack-4+b1), libhdf5-hl-cpp-100 (= 1.10.7+repack-4+b1), libhdf5-hl-fortran-100 (= 1.10.7+repack-4+b1), libhogweed6 (= 3.7.3-1), libicu71 (= 71.1-3), libidn2-0 (= 2.3.2-2), libisl23 (= 0.24-2), libitm1 (= 12.1.0-2), libjpeg-dev (= 1:2.1.2-1), libjpeg62-turbo (= 1:2.1.2-1), libjpeg62-turbo-dev (= 1:2.1.2-1), libjsoncpp25 (= 1.9.5-4), libk5crypto3 (= 1.19.2-2+b2), libkeyutils1 (= 1.6.1-3), libkrb5-3 (= 1.19.2-2+b2), libkrb5support0 (= 1.19.2-2+b2), libldap-2.5-0 (= 2.5.12+dfsg-2), liblsan0 (= 12.1.0-2), liblz4-1 (= 1.9.3-2), liblzma5 (= 5.2.5-2.1), libmagic-mgc (= 1:5.41-4), libmagic1 (= 1:5.41-4), libmount1 (= 2.38-4), libmpc3 (= 1.2.1-2), libmpfr6 (= 4.1.0-3), libncurses6 (= 6.3+20220423-2), libncursesw6 (= 6.3+20220423-2), libnettle8 (= 3.7.3-1), libnghttp2-14 (= 1.47.0-1+b1), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libp11-kit0 (= 0.24.1-1), libpam-modules (= 1.4.0-13), libpam-modules-bin (= 1.4.0-13), libpam-runtime (= 1.4.0-13), libpam0g (= 1.4.0-13), libpcre2-8-0 (= 10.40-1), libpcre3 (= 2:8.39-14), libperl5.34 (= 5.34.0-4), libpipeline1 (= 1.5.6-1), libprocps8 (= 2:3.3.17-7+b1), libpsl5 (= 0.21.0-1.2), libquadmath0 (= 12.1.0-2), librhash0 (= 1.4.2-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2), libsasl2-2 (= 2.1.28+dfsg-6), libsasl2-modules-db (= 2.1.28+dfsg-6), libseccomp2 (= 2.5.4-1), libselinux1 (= 3.3-1+b2), libsigsegv2 (= 2.14-1), libsmartcols1 (= 2.38-4), libssh2-1 (= 1.10.0-3+b1), libssl-dev (= 3.0.3-5), libssl3 (= 3.0.3-5), libstdc++-11-dev (= 11.3.0-3), libstdc++6 (= 12.1.0-2), libsub-override-perl (= 0.09-2), libsystemd0 (= 251.1-1), libsz2 (= 1.0.6-1), libtasn1-6 (= 4.18.0-4), libtinfo6 (= 6.3+20220423-2), libtirpc-common (= 1.3.2-2), libtirpc-dev (= 1.3.2-2), libtirpc3 (= 1.3.2-2), libtool (= 2.4.7-4), libtsan0 (= 11.3.0-3), libubsan1 (= 12.1.0-2), libuchardet0 (= 0.0.7-1), libudev1 (= 251.1-1), libunistring2 (= 1.0-1), libuuid1 (= 2.38-4), libuv1 (= 1.44.1-2), libxml2 (= 2.9.14+dfsg-1), libzstd1 (= 1.5.2+dfsg-1), linux-libc-dev (= 5.17.11-1), login (= 1:4.11.1+dfsg1-2), lsb-base (= 11.2), m4 (= 1.4.18-5), make (= 4.3-4.1), man-db (= 2.10.2-1), mawk (= 1.3.4.20200120-3+b1), ncurses-base (= 6.3+20220423-2), ncurses-bin (= 6.3+20220423-2), patch (= 2.7.6-7), perl (= 5.34.0-4), perl-base (= 5.34.0-4), perl-modules-5.34 (= 5.34.0-4), po-debconf (= 1.0.21+nmu1), procps (= 2:3.3.17-7+b1), rpcsvc-proto (= 1.4.2-4), sed (= 4.8-1), sensible-utils (= 0.0.17), sysvinit-utils (= 3.03-1), tar (= 1.34+dfsg-1), util-linux (= 2.38-4), util-linux-extra (= 2.38-4), xz-utils (= 5.2.5-2.1), zlib1g (= 1:1.2.11.dfsg-4), zlib1g-dev (= 1:1.2.11.dfsg-4) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1653803145" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ mindthegap-dbgsym_2.3.0-1_mips64el.deb -------------------------------------- new Debian package, version 2.0. size 3412752 bytes: control archive=540 bytes. 386 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: mindthegap-dbgsym Source: mindthegap Version: 2.3.0-1 Auto-Built-Package: debug-symbols Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 3615 Depends: mindthegap (= 2.3.0-1) Section: debug Priority: optional Description: debug symbols for mindthegap Build-Ids: 0dfe4ae0fe0549e28aa47d6e21b96f1a200d64d4 drwxr-xr-x root/root 0 2022-05-29 05:45 ./ drwxr-xr-x root/root 0 2022-05-29 05:45 ./usr/ drwxr-xr-x root/root 0 2022-05-29 05:45 ./usr/lib/ drwxr-xr-x root/root 0 2022-05-29 05:45 ./usr/lib/debug/ drwxr-xr-x root/root 0 2022-05-29 05:45 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2022-05-29 05:45 ./usr/lib/debug/.build-id/0d/ -rw-r--r-- root/root 3690632 2022-05-29 05:45 ./usr/lib/debug/.build-id/0d/fe4ae0fe0549e28aa47d6e21b96f1a200d64d4.debug drwxr-xr-x root/root 0 2022-05-29 05:45 ./usr/share/ drwxr-xr-x root/root 0 2022-05-29 05:45 ./usr/share/doc/ lrwxrwxrwx root/root 0 2022-05-29 05:45 ./usr/share/doc/mindthegap-dbgsym -> mindthegap mindthegap_2.3.0-1_mips64el.deb ------------------------------- new Debian package, version 2.0. size 201992 bytes: control archive=1068 bytes. 1024 bytes, 19 lines control 414 bytes, 6 lines md5sums Package: mindthegap Version: 2.3.0-1 Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 1119 Depends: libc6 (>= 2.8), libgatbcore3 (>= 1.4.2+dfsg-7), libgcc-s1 (>= 3.0), libhdf5-103-1, libstdc++6 (>= 11) Section: science Priority: optional Homepage: https://github.com/GATB/MindTheGap Description: performs detection and assembly of DNA insertion variants in NGS read datasets Designed to call insertions of any size, whether they are novel or duplicated, homozygous or heterozygous in the donor genome. It takes as input a set of reads and a reference genome. It outputs two sets of FASTA sequences: one is the set of breakpoints of detection insertion sites, the other is the set of assembled insertions for each breakpoint. MindTheGap can also be used as a genome assembly finishing tool. It can fill the gaps between a set of input contigs without any a priori on their relative order and orientation. It outputs the results in gfa file. drwxr-xr-x root/root 0 2022-05-29 05:45 ./ drwxr-xr-x root/root 0 2022-05-29 05:45 ./usr/ drwxr-xr-x root/root 0 2022-05-29 05:45 ./usr/bin/ -rwxr-xr-x root/root 1122520 2022-05-29 05:45 ./usr/bin/MindTheGap drwxr-xr-x root/root 0 2022-05-29 05:45 ./usr/share/ drwxr-xr-x root/root 0 2022-05-29 05:45 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-05-29 05:45 ./usr/share/doc/mindthegap/ -rw-r--r-- root/root 5262 2022-04-20 14:18 ./usr/share/doc/mindthegap/README.md.gz -rw-r--r-- root/root 660 2022-05-29 05:45 ./usr/share/doc/mindthegap/changelog.Debian.gz -rw-r--r-- root/root 2725 2022-04-20 14:18 ./usr/share/doc/mindthegap/changelog.gz -rw-r--r-- root/root 1092 2022-05-29 05:44 ./usr/share/doc/mindthegap/copyright drwxr-xr-x root/root 0 2022-05-29 05:45 ./usr/share/man/ drwxr-xr-x root/root 0 2022-05-29 05:45 ./usr/share/man/man1/ -rw-r--r-- root/root 629 2022-05-29 05:45 ./usr/share/man/man1/MindTheGap.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [578 B] Get:5 copy:/<>/apt_archive ./ Packages [666 B] Fetched 2207 B in 0s (83.3 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-ipv6addr-perl libnet-netmask-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libwww-perl binutils-multiarch libtext-template-perl zip Recommended packages: gnupg liblist-someutils-xs-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-ipv6addr-perl libnet-netmask-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils sbuild-build-depends-lintian-dummy:mips64el t1utils unzip 0 upgraded, 101 newly installed, 0 to remove and 0 not upgraded. Need to get 7649 kB of archives. After this operation, 22.8 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.64-1 [36.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.5-3 [51.3 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.35-2 [577 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.38.5-1 [830 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.35-2 [960 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libaliased-perl all 0.34-1.1 [14.1 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.40+b1 [72.1 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b4 [11.3 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1.1 [12.7 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b3 [16.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b4 [25.8 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.31-1 [24.2 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1.1 [12.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b4 [45.8 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b8 [37.7 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1+b2 [15.5 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-tiny-perl all 2.28-1 [17.3 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-util-perl amd64 1.102-1+b2 [25.7 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-install-perl all 0.928-1.1 [10.8 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-optlist-perl all 0.112-1 [11.8 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-perl all 0.988-1 [51.9 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libconst-fast-perl all 0.014-1.1 [8552 B] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.28-1 [130 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-perl all 0.03+ds1-1.1 [18.4 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-1.1 [13.7 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002002-1 [37.8 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-xs-perl amd64 0.430-2+b1 [40.5 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-messagepack-perl amd64 1.02-1 [35.7 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1.1 [33.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-netmask-perl all 2.0001-1 [32.2 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-1+b6 [104 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-ip-perl all 0.30-1 [21.0 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-uri-perl all 0.07-2 [11.2 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b3 [26.1 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-address-xs-perl amd64 1.04-1+b4 [28.0 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.09-1 [16.4 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-2 [7448 B] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.11-2 [8992 B] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1.1 [318 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-html5-entities-perl all 0.004-1.1 [21.3 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libio-interactive-perl all 1.023-1 [11.5 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libio-prompt-tiny-perl all 0.003-1 [9150 B] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004003-1 [13.1 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-someutils-perl all 0.58-1 [36.5 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-utilsby-perl all 0.12-1 [16.1 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.005004-3 [60.5 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libmouse-perl amd64 2.5.10-1+b2 [173 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b4 [12.1 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1+b2 [13.9 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.122-1 [56.0 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-gzip-perl amd64 0.19-1+b8 [17.5 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-utf8-strict-perl amd64 0.009-1+b1 [12.2 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libproc-processtable-perl amd64 0.634-1+b1 [46.9 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.023+ds-1 [99.7 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.023+ds-1 [104 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libsort-versions-perl all 1.62-1 [11.0 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libxs-parse-keyword-perl amd64 0.23-1 [52.6 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libsyntax-keyword-try-perl amd64 0.27-1 [28.5 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libterm-readkey-perl amd64 2.38-1+b3 [27.8 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-4+b9 [8800 B] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.13-1+b1 [13.6 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.9-1+b1 [197 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b4 [75.8 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b3 [20.3 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 5.10-1 [91.0 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.83+ds-1+b1 [35.9 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.23-3 [90.0 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-26 [171 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.114.0 [1382 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7649 kB in 0s (25.7 MB/s) Selecting previously unselected package diffstat. (Reading database ... 40268 files and directories currently installed.) Preparing to unpack .../000-diffstat_1.64-1_amd64.deb ... Unpacking diffstat (1.64-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../001-libassuan0_2.5.5-3_amd64.deb ... Unpacking libassuan0:amd64 (2.5.5-3) ... Selecting previously unselected package gpgconf. Preparing to unpack .../002-gpgconf_2.2.35-2_amd64.deb ... Unpacking gpgconf (2.2.35-2) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../003-libsqlite3-0_3.38.5-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.38.5-1) ... Selecting previously unselected package gpg. Preparing to unpack .../004-gpg_2.2.35-2_amd64.deb ... Unpacking gpg (2.2.35-2) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../005-libaliased-perl_0.34-1.1_all.deb ... Unpacking libaliased-perl (0.34-1.1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../006-libapt-pkg-perl_0.1.40+b1_amd64.deb ... Unpacking libapt-pkg-perl (0.1.40+b1) ... Selecting previously unselected package libb-hooks-op-check-perl. Preparing to unpack .../007-libb-hooks-op-check-perl_0.22-1+b4_amd64.deb ... Unpacking libb-hooks-op-check-perl (0.22-1+b4) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../008-libdynaloader-functions-perl_0.003-1.1_all.deb ... Unpacking libdynaloader-functions-perl (0.003-1.1) ... Selecting previously unselected package libdevel-callchecker-perl. Preparing to unpack .../009-libdevel-callchecker-perl_0.008-1+b3_amd64.deb ... Unpacking libdevel-callchecker-perl (0.008-1+b3) ... Selecting previously unselected package libparams-classify-perl. Preparing to unpack .../010-libparams-classify-perl_0.015-1+b4_amd64.deb ... Unpacking libparams-classify-perl (0.015-1+b4) ... Selecting previously unselected package libmodule-runtime-perl. 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Setting up libxs-parse-keyword-perl (0.23-1) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up libipc-system-simple-perl (1.30-1) ... Setting up libnet-domain-tld-perl (1.75-1.1) ... Setting up libperlio-utf8-strict-perl (0.009-1+b1) ... Setting up libio-prompt-tiny-perl (0.003-1) ... Setting up lzip (1.23-3) ... update-alternatives: using /usr/bin/lzip.lzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.lzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.lzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up t1utils (1.41-4) ... Setting up diffstat (1.64-1) ... Setting up libvariable-magic-perl (0.62-1+b4) ... Setting up libb-hooks-op-check-perl (0.22-1+b4) ... Setting up liblist-moreutils-xs-perl (0.430-2+b1) ... Setting up libparams-util-perl (1.102-1+b2) ... Setting up libtime-duration-perl (1.21-1) ... 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Setting up libfont-ttf-perl (1.06-1.1) ... Setting up libtext-levenshteinxs-perl (0.03-4+b9) ... Setting up libperlio-gzip-perl (0.19-1+b8) ... Setting up libhtml-html5-entities-perl (0.004-1.1) ... Setting up libsereal-decoder-perl (4.023+ds-1) ... Setting up libmarkdown2:amd64 (2.2.7-2) ... Setting up liburi-perl (5.10-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up gpg (2.2.35-2) ... Setting up libdata-validate-ip-perl (0.30-1) ... Setting up libemail-address-xs-perl (1.04-1+b4) ... Setting up libfile-basedir-perl (0.09-1) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libtext-markdown-discount-perl:amd64 (0.13-1+b1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl (0.008-1+b3) ... Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.112-1) ... Setting up libsub-exporter-perl (0.988-1) ... Setting up libiterator-perl (0.03+ds1-1.1) ... Setting up libiterator-util-perl (0.02+ds1-1.1) ... Setting up libparams-classify-perl (0.015-1+b4) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libconst-fast-perl (0.014-1.1) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-1.1) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.005004-3) ... Setting up liblist-someutils-perl (0.58-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.114.0) ... Setting up sbuild-build-depends-lintian-dummy:mips64el (0.invalid.0) ... Processing triggers for man-db (2.10.2-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.33-7) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 70456 Build-Time: 82 Distribution: unstable Foreign Architectures: mips64el Host Architecture: mips64el Install-Time: 29 Job: mindthegap_2.3.0-1 Lintian: pass Machine Architecture: amd64 Package: mindthegap Package-Time: 125 Source-Version: 2.3.0-1 Space: 70456 Status: successful Version: 2.3.0-1 -------------------------------------------------------------------------------- Finished at 2022-06-01T00:20:39Z Build needed 00:02:05, 70456k disk space