sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | minimap 0.2-5 (armhf) Fri, 19 Jun 2020 15:10:40 +0000 | +==============================================================================+ Package: minimap Version: 0.2-5 Source Version: 0.2-5 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-6065bf84-fe4d-4641-9452-74447278e544' with '<>' I: NOTICE: Log filtering will replace 'build/minimap-UJgiCb/resolver-PJTsUg' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-06-19-0806.56.pdiff [6092 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-06-19-1404.05.pdiff [18.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-06-19-1404.05.pdiff [18.4 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-06-19-0806.56.pdiff [6308 B] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-06-19-1404.05.pdiff [25.7 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-06-19-1404.05.pdiff [25.7 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main armhf Packages [7990 kB] Fetched 8248 kB in 2s (5277 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: bsdutils fdisk libblkid1 libfdisk1 libmount1 libsmartcols1 libuuid1 mount util-linux 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 2498 kB of archives. After this operation, 0 B of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 bsdutils amd64 1:2.35.2-3 [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libblkid1 amd64 2.35.2-3 [192 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuuid1 amd64 2.35.2-3 [81.1 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libfdisk1 amd64 2.35.2-3 [232 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libmount1 amd64 2.35.2-3 [208 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libsmartcols1 amd64 2.35.2-3 [155 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 fdisk amd64 2.35.2-3 [185 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 util-linux amd64 2.35.2-3 [1118 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 mount amd64 2.35.2-3 [180 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2498 kB in 0s (71.9 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10321 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.35.2-3_amd64.deb ... Unpacking bsdutils (1:2.35.2-3) over (1:2.35.2-2) ... Setting up bsdutils (1:2.35.2-3) ... (Reading database ... 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Processing triggers for libc-bin (2.30-8) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'minimap' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/minimap.git Please use: git clone https://salsa.debian.org/med-team/minimap.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 112 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main minimap 0.2-5 (dsc) [2082 B] Get:2 http://debian.oregonstate.edu/debian unstable/main minimap 0.2-5 (tar) [31.2 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main minimap 0.2-5 (diff) [78.5 kB] Fetched 112 kB in 0s (2097 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/minimap-UJgiCb/minimap-0.2' with '<>' I: NOTICE: Log filtering will replace 'build/minimap-UJgiCb' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), d-shlibs, zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf Filtered Build-Depends: debhelper-compat (= 12), d-shlibs, zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [417 B] Get:5 copy:/<>/apt_archive ./ Packages [504 B] Fetched 1878 B in 0s (80.0 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdmainutils build-essential cpp-9-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-9 g++-9-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-10-base:armhf gcc-10-cross-base gcc-9-arm-linux-gnueabihf gcc-9-arm-linux-gnueabihf-base gcc-9-base:armhf gcc-9-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libasan5-armhf-cross libatomic1:armhf libatomic1-armhf-cross libbsd0 libc6:armhf libc6-armhf-cross libc6-dev libc6-dev:armhf libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:armhf libcrypt1:armhf libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:armhf libgcc-9-dev-armhf-cross libgcc-s1:armhf libgcc-s1-armhf-cross libglib2.0-0 libgomp1:armhf libgomp1-armhf-cross libicu67 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libperl5.30 libpipeline1 libsigsegv2 libstdc++-9-dev libstdc++-9-dev:armhf libstdc++-9-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db perl perl-modules-5.30 po-debconf sensible-utils ucf zlib1g:armhf zlib1g-dev:armhf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc calendar wamerican | wordlist whois vacation gcc-9-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-9-multilib gcc-9-doc manpages-dev flex bison gdb-arm-linux-gnueabihf gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armhf libc-l10n:armhf locales:armhf glibc-doc manpages-dev:armhf gnupg | gnupg2 git bzr libstdc++-9-doc libstdc++-9-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: bsdextrautils gnupg | gnupg2 libalgorithm-merge-perl curl | wget | lynx libidn2-0:armhf libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdmainutils build-essential cpp-9-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-9 g++-9-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-10-base:armhf gcc-10-cross-base gcc-9-arm-linux-gnueabihf gcc-9-arm-linux-gnueabihf-base gcc-9-base:armhf gcc-9-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libasan5-armhf-cross libatomic1:armhf libatomic1-armhf-cross libbsd0 libc6:armhf libc6-armhf-cross libc6-dev libc6-dev:armhf libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:armhf libcrypt1:armhf libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:armhf libgcc-9-dev-armhf-cross libgcc-s1:armhf libgcc-s1-armhf-cross libglib2.0-0 libgomp1:armhf libgomp1-armhf-cross libicu67 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libperl5.30 libpipeline1 libsigsegv2 libstdc++-9-dev libstdc++-9-dev:armhf libstdc++-9-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db perl perl-modules-5.30 po-debconf sbuild-build-depends-main-dummy:armhf sensible-utils ucf zlib1g:armhf zlib1g-dev:armhf 0 upgraded, 102 newly installed, 0 to remove and 0 not upgraded. Need to get 88.3 MB of archives. After this operation, 360 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [928 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 12.1.1 [52.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-5 [920 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.2-2 [33.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.2-1 [1315 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.30 all 5.30.3-4 [2806 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.30 amd64 5.30.3-4 [4019 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.30.3-4 [290 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main armhf gcc-10-base armhf 10.1.0-4 [197 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main armhf gcc-9-base armhf 9.3.0-14 [197 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-5 [262 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-5 [120 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-5 [67.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.2-1 [775 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabihf amd64 2.34-8 [2750 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.16-1 [104 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.30-8 [2631 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev amd64 9.3.0-14 [1701 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9 amd64 9.3.0-14 [10.7 MB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:9.2.1-3.1 [1644 B] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.19.7 [1414 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.19.7 [1773 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-arm-linux-gnueabihf-base amd64 9.3.0-13cross1 [197 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-arm-linux-gnueabihf amd64 9.3.0-13cross1 [6818 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabihf amd64 4:9.2.1-3.1 [16.7 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base all 9.3.0-13cross1 [193 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10.1.0-3cross1 [194 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armhf-cross all 2.30-2cross1 [1111 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-armhf-cross all 10.1.0-3cross1 [36.2 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armhf-cross all 10.1.0-3cross1 [82.4 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armhf-cross all 10.1.0-3cross1 [6632 B] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-armhf-cross all 9.3.0-13cross1 [363 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armhf-cross all 10.1.0-3cross1 [380 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armhf-cross all 10.1.0-3cross1 [115 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-armhf-cross all 9.3.0-13cross1 [659 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-arm-linux-gnueabihf amd64 9.3.0-13cross1 [7180 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabihf amd64 4:9.2.1-3.1 [1476 B] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armhf-cross all 5.4.19-1cross1 [1155 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armhf-cross all 2.30-2cross1 [2118 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-armhf-cross all 9.3.0-13cross1 [1725 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-arm-linux-gnueabihf amd64 9.3.0-13cross1 [7406 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabihf amd64 4:9.2.1-3.1 [1184 B] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-2 [8610 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-5+b1 [710 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armhf all 12.8 [6644 B] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 d-shlibs all 0.93 [17.7 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.1 [187 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.8.1-1 [25.2 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.8.1-1 [14.9 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.64.3-1 [1341 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.1 [1012 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-s1 armhf 10.1.0-4 [36.2 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main armhf libcrypt1 armhf 1:4.4.16-1 [101 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main armhf libc6 armhf 2.30-8 [2343 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main armhf libasan5 armhf 9.3.0-14 [370 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main armhf libatomic1 armhf 10.1.0-4 [6876 B] Get:93 http://debian.oregonstate.edu/debian unstable/main armhf linux-libc-dev armhf 5.6.14-2 [1096 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main armhf libcrypt-dev armhf 1:4.4.16-1 [120 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main armhf libc6-dev armhf 2.30-8 [2136 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main armhf libgomp1 armhf 10.1.0-4 [84.4 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++6 armhf 10.1.0-4 [420 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main armhf libubsan1 armhf 10.1.0-4 [116 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-9-dev armhf 9.3.0-14 [663 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++-9-dev armhf 9.3.0-14 [1757 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main armhf zlib1g armhf 1:1.2.11.dfsg-2 [85.4 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [185 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 88.3 MB in 1s (112 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 10321 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../001-bsdmainutils_12.1.1_amd64.deb ... Unpacking bsdmainutils (12.1.1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../002-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../003-groff-base_1.22.4-5_amd64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../004-libpipeline1_1.5.2-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.2-2) ... Selecting previously unselected package man-db. Preparing to unpack .../005-man-db_2.9.2-1_amd64.deb ... Unpacking man-db (2.9.2-1) ... Selecting previously unselected package perl-modules-5.30. 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Preparing to unpack .../098-libstdc++-9-dev_9.3.0-14_armhf.deb ... Unpacking libstdc++-9-dev:armhf (9.3.0-14) ... Selecting previously unselected package zlib1g:armhf. Preparing to unpack .../099-zlib1g_1%3a1.2.11.dfsg-2_armhf.deb ... Unpacking zlib1g:armhf (1:1.2.11.dfsg-2) ... Selecting previously unselected package zlib1g-dev:armhf. Preparing to unpack .../100-zlib1g-dev_1%3a1.2.11.dfsg-2_armhf.deb ... Unpacking zlib1g-dev:armhf (1:1.2.11.dfsg-2) ... Selecting previously unselected package sbuild-build-depends-main-dummy:armhf. Preparing to unpack .../101-sbuild-build-depends-main-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libpipeline1:amd64 (1.5.2-2) ... Setting up libc6-armhf-cross (2.30-2cross1) ... Setting up perl-modules-5.30 (5.30.3-4) ... Setting up libicu67:amd64 (67.1-2) ... Setting up libmagic-mgc (1:5.38-5) ... Setting up libglib2.0-0:amd64 (2.64.3-1) ... No schema files found: doing nothing. Setting up libmagic1:amd64 (1:5.38-5) ... Setting up linux-libc-dev:armhf (5.6.14-2) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.38-5) ... Setting up gcc-9-arm-linux-gnueabihf-base:amd64 (9.3.0-13cross1) ... Setting up gcc-10-base:armhf (10.1.0-4) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up linux-libc-dev-armhf-cross (5.4.19-1cross1) ... Setting up autopoint (0.19.8.1-10) ... Setting up d-shlibs (0.93) ... Setting up gcc-9-cross-base (9.3.0-13cross1) ... Setting up gcc-10-cross-base (10.1.0-3cross1) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.16-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libperl5.30:amd64 (5.30.3-4) ... Setting up libc6-dev:amd64 (2.30-8) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up binutils-arm-linux-gnueabihf (2.34-8) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.10+dfsg-5+b1) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up gcc-9-base:armhf (9.3.0-14) ... Setting up libgomp1-armhf-cross (10.1.0-3cross1) ... Setting up libstdc++-9-dev:amd64 (9.3.0-14) ... Setting up libtool (2.4.6-14) ... Setting up cpp-9-arm-linux-gnueabihf (9.3.0-13cross1) ... Setting up libgcc-s1-armhf-cross (10.1.0-3cross1) ... Setting up libc6-dev-armhf-cross (2.30-2cross1) ... Setting up m4 (1.4.18-4) ... Setting up libatomic1-armhf-cross (10.1.0-3cross1) ... Setting up libasan5-armhf-cross (9.3.0-13cross1) ... Setting up perl (5.30.3-4) ... Setting up libstdc++6-armhf-cross (10.1.0-3cross1) ... Setting up bsdmainutils (12.1.1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:amd64 (0.6.13-1) ... Setting up libubsan1-armhf-cross (10.1.0-3cross1) ... Setting up ucf (3.0043) ... Setting up g++-9 (9.3.0-14) ... Setting up libdpkg-perl (1.19.7) ... Setting up autoconf (2.69-11.1) ... Setting up g++ (4:9.2.1-3.1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up libgcc-9-dev-armhf-cross (9.3.0-13cross1) ... Setting up libsub-override-perl (0.09-2) ... Setting up cpp-arm-linux-gnueabihf (4:9.2.1-3.1) ... Setting up automake (1:1.16.2-1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up gettext (0.19.8.1-10) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up man-db (2.9.2-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.19.7) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up gcc-9-arm-linux-gnueabihf (9.3.0-13cross1) ... Setting up libstdc++-9-dev-armhf-cross (9.3.0-13cross1) ... Setting up build-essential (12.8) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up gcc-arm-linux-gnueabihf (4:9.2.1-3.1) ... Setting up libfile-stripnondeterminism-perl (1.8.1-1) ... Setting up po-debconf (1.0.21) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-9-arm-linux-gnueabihf (9.3.0-13cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.8.1-1) ... Setting up g++-arm-linux-gnueabihf (4:9.2.1-3.1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-armhf (12.8) ... Setting up libcrypt1:armhf (1:4.4.16-1) ... Setting up libgcc-s1:armhf (10.1.0-4) ... Setting up dh-autoreconf (19) ... Setting up libc6:armhf (2.30-8) ... Setting up libcrypt-dev:armhf (1:4.4.16-1) ... Setting up libc6-dev:armhf (2.30-8) ... Setting up libstdc++6:armhf (10.1.0-4) ... Setting up debhelper (13.1) ... Setting up zlib1g:armhf (1:1.2.11.dfsg-2) ... Setting up libgomp1:armhf (10.1.0-4) ... Setting up libasan5:armhf (9.3.0-14) ... Setting up libatomic1:armhf (10.1.0-4) ... Setting up libubsan1:armhf (10.1.0-4) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ... Setting up libgcc-9-dev:armhf (9.3.0-14) ... Setting up libstdc++-9-dev:armhf (9.3.0-14) ... Setting up sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.30-8) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-9-amd64 #1 SMP Debian 4.19.118-2 (2020-04-29) amd64 (x86_64) Toolchain package versions: binutils_2.34-8 dpkg-dev_1.19.7 g++-9_9.3.0-14 gcc-9_9.3.0-14 libc6-dev_2.30-8 libstdc++-9-dev_9.3.0-14 libstdc++-9-dev-armhf-cross_9.3.0-13cross1 libstdc++6_10.1.0-4 libstdc++6-armhf-cross_10.1.0-3cross1 linux-libc-dev_5.6.14-2 Package versions: adduser_3.118 apt_2.1.6 autoconf_2.69-11.1 automake_1:1.16.2-1 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-8 binutils-arm-linux-gnueabihf_2.34-8 binutils-common_2.34-8 binutils-x86-64-linux-gnu_2.34-8 bsdmainutils_12.1.1 bsdutils_1:2.35.2-3 build-essential_12.8 bzip2_1.0.8-3 coreutils_8.30-3+b1 cpp_4:9.2.1-3.1 cpp-8_8.4.0-4 cpp-9_9.3.0-14 cpp-9-arm-linux-gnueabihf_9.3.0-13cross1 cpp-arm-linux-gnueabihf_4:9.2.1-3.1 cross-config_2.6.15-3 crossbuild-essential-armhf_12.8 d-shlibs_0.93 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.1 debian-archive-keyring_2019.1 debianutils_4.11 dh-autoreconf_19 dh-strip-nondeterminism_1.8.1-1 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.35.2-3 file_1:5.38-5 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-9_9.3.0-14 g++-9-arm-linux-gnueabihf_9.3.0-13cross1 g++-arm-linux-gnueabihf_4:9.2.1-3.1 gcc_4:9.2.1-3.1 gcc-10-base_10.1.0-4 gcc-10-cross-base_10.1.0-3cross1 gcc-8-base_8.4.0-4 gcc-9_9.3.0-14 gcc-9-arm-linux-gnueabihf_9.3.0-13cross1 gcc-9-arm-linux-gnueabihf-base_9.3.0-13cross1 gcc-9-base_9.3.0-14 gcc-9-cross-base_9.3.0-13cross1 gcc-arm-linux-gnueabihf_4:9.2.1-3.1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.1.6 libarchive-zip-perl_1.68-1 libasan5_9.3.0-14 libasan5-armhf-cross_9.3.0-13cross1 libatomic1_10.1.0-4 libatomic1-armhf-cross_10.1.0-3cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3+b1 libbinutils_2.34-8 libblkid1_2.35.2-3 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-3 libc-bin_2.30-8 libc-dev-bin_2.30-8 libc6_2.30-8 libc6-armhf-cross_2.30-2cross1 libc6-dev_2.30-8 libc6-dev-armhf-cross_2.30-2cross1 libcap-ng0_0.7.9-2.2 libcc1-0_10.1.0-4 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000003-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libctf-nobfd0_2.34-8 libctf0_2.34-8 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.252 libdebhelper-perl_13.1 libdebian-dpkgcross-perl_2.6.15-3 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.35.2-3 libffi6_3.2.1-9 libffi7_3.3-4 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.8.1-1 libfile-which-perl_1.23-1 libgcc-9-dev_9.3.0-14 libgcc-9-dev-armhf-cross_9.3.0-13cross1 libgcc-s1_10.1.0-4 libgcc-s1-armhf-cross_10.1.0-3cross1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.3-1 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.14-2 libgomp1_10.1.0-4 libgomp1-armhf-cross_10.1.0-3cross1 libgpg-error0_1.38-1 libhogweed4_3.5.1+really3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libicu67_67.1-2 libidn2-0_2.3.0-1 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 libitm1_10.1.0-4 liblocale-gettext-perl_1.07-4 liblsan0_10.1.0-4 liblz4-1_1.9.2-2 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.35.2-3 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.4.0-4 libncursesw6_6.2-1 libnettle6_3.5.1+really3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libp11-kit0_0.23.20-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.28_5.28.1-6 libperl5.30_5.30.3-4 libpipeline1_1.5.2-2 libquadmath0_10.1.0-4 libseccomp2_2.4.3-1+b1 libselinux1_3.0-1+b3 libsemanage-common_3.0-1 libsemanage1_3.0-1+b3 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.35.2-3 libss2_1.45.6-1 libstdc++-9-dev_9.3.0-14 libstdc++-9-dev-armhf-cross_9.3.0-13cross1 libstdc++6_10.1.0-4 libstdc++6-armhf-cross_10.1.0-3cross1 libsub-override-perl_0.09-2 libsystemd0_245.6-1 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libtsan0_10.1.0-4 libubsan1_10.1.0-4 libubsan1-armhf-cross_10.1.0-3cross1 libuchardet0_0.0.7-1 libudev1_245.6-1 libunistring2_0.9.10-4 libuuid1_2.35.2-3 libxml-libxml-perl_2.0134+dfsg-2 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-5+b1 libyaml-perl_1.30-1 libzstd1_1.4.5+dfsg-2 linux-libc-dev_5.6.14-2 linux-libc-dev-armhf-cross_5.4.19-1cross1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.3-3 man-db_2.9.2-1 mawk_1.3.4.20200120-2 mount_2.35.2-3 ncurses-base_6.2-1 ncurses-bin_6.2-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.3-4 po-debconf_1.0.21 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 tzdata_2020a-1 ucf_3.0043 util-linux_2.35.2-3 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: minimap Binary: minimap, libminimap0, libminimap-dev Architecture: any Version: 0.2-5 Maintainer: Debian Med Packaging Team Uploaders: Sascha Steinbiss Homepage: https://github.com/lh3/minimap Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/minimap Vcs-Git: https://salsa.debian.org/med-team/minimap.git Testsuite: autopkgtest Testsuite-Triggers: build-essential Build-Depends: debhelper-compat (= 12), d-shlibs, zlib1g-dev Package-List: libminimap-dev deb libdevel optional arch=any libminimap0 deb libs optional arch=any minimap deb science optional arch=any Checksums-Sha1: 1ef8361ca16a92e898d901713b6f95e94c2b0db7 31209 minimap_0.2.orig.tar.gz f2f52624dce8e3fad8f192d29493b1260e9a606c 78468 minimap_0.2-5.debian.tar.xz Checksums-Sha256: cfcf77cfe2d8d64b16ea60e0139363190eca4853da9dca9d872c38fe80bf5d68 31209 minimap_0.2.orig.tar.gz 4b321697efbade4d090735926a5e01db090144a84e4c290941ac870414caddc6 78468 minimap_0.2-5.debian.tar.xz Files: 15257d99648f486e86580d8a7accc96b 31209 minimap_0.2.orig.tar.gz 927634f1bf8d7abd3141729569070a68 78468 minimap_0.2-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEWzS6WqtVB+kDQm6F6NN64vCfSHIFAl6a9JsACgkQ6NN64vCf SHISPA/+IVtuwXMBZnK4t7wtd88fVpgZA+q9yYUBKLNsdHlavuUvxi6gRSNvFH9a TSSY1LlPsXEtJVHcbObdukiem2E95oZGiiwL/pK7iELdnErtw/28g6PGYwkdwfh5 +uTpWH4HKcKzsBVlEtNbspeO9Lev9abGDEdNBW5CHJThSqeg8i63Qp2WUjhJgLAB 5PmcXIK++wY+Q1CiaLCf0a3iy7arZKIhQ7zvFe3u/kQscumHPCdSBfJWIcyK5adP 6T0tgxcGGA7RrQ+ki0i+SFwDMXD3MXHpPb8uXJ2kGS10RCcJbykxKw3oAEusHAw5 rAH6/6TEZXP+gHHZR1r0/C1gRCW/CJFb088mwVdvqdk0OSlaGWEpN2keWX152p+b GEvM+VKDNxv4W3FlwkyMztiLKPGT38E+slwcAPSdEw/Hbkwb21IQoT/38Q/JW9O+ oSNK/clMR0DUYSmq+/EU85ObvTQT0VQXZG1jJ8+6l7UDHFDXpDbC0CEb/RS4TUmm bu7rq+HzsABt+YDphBecRpzYlOThHh7NTr/K1Pnfg09Ia6ag3dAi9yCfM75TmF+F KJAzulaumzeGTnmKH/CnoW6xDbbqVpNwqU2s7ve+zKeYuvVTwWprdWpI2QuGUu0K NDq1SdCDf0y/50FD/owVlCfKbw481aRCP5qQkEPy4EJirlVRjLU= =Jh7s -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Sat Apr 18 12:37:47 2020 UTC gpgv: using RSA key 5B34BA5AAB5507E903426E85E8D37AE2F09F4872 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./minimap_0.2-5.dsc dpkg-source: info: extracting minimap in /<> dpkg-source: info: unpacking minimap_0.2.orig.tar.gz dpkg-source: info: unpacking minimap_0.2-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying make_shared_lib dpkg-source: info: applying hardening dpkg-source: info: applying ensure_64bit_value Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-6065bf84-fe4d-4641-9452-74447278e544 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarmhf -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package minimap dpkg-buildpackage: info: source version 0.2-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Sascha Steinbiss dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean dh_auto_clean make -j1 clean make[1]: Entering directory '/<>' rm -fr gmon.out *.o a.out minimap sdust minimap-lite *~ *.a *.dSYM session* make[1]: Leaving directory '/<>' dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a dh_auto_build -a make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabihf-pkg-config CXX=arm-linux-gnueabihf-g\+\+ CC=arm-linux-gnueabihf-gcc make[1]: Entering directory '/<>' arm-linux-gnueabihf-gcc -c -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -Wno-unused-function -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I. main.c -o main.o arm-linux-gnueabihf-gcc -c -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -Wno-unused-function -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I. kthread.c -o kthread.o arm-linux-gnueabihf-gcc -c -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -Wno-unused-function -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I. misc.c -o misc.o arm-linux-gnueabihf-gcc -c -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -Wno-unused-function -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I. bseq.c -o bseq.o arm-linux-gnueabihf-gcc -c -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -Wno-unused-function -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I. sketch.c -o sketch.o arm-linux-gnueabihf-gcc -c -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -Wno-unused-function -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I. sdust.c -o sdust.o arm-linux-gnueabihf-gcc -c -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -Wno-unused-function -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I. index.c -o index.o index.c: In function ‘mm_idx_load’: index.c:317:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 317 | fread(&mi->freq_thres, sizeof(float), 1, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ index.c:319:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 319 | fread(mi->len, 4, mi->n, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ index.c:324:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 324 | fread(&l, 1, 1, fp); | ^~~~~~~~~~~~~~~~~~~ index.c:326:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 326 | fread(mi->name[i], 1, l, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ index.c:335:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 335 | fread(&b->n, 4, 1, fp); | ^~~~~~~~~~~~~~~~~~~~~~ index.c:337:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 337 | fread(b->p, 8, b->n, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~ index.c:338:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 338 | fread(&size, 4, 1, fp); | ^~~~~~~~~~~~~~~~~~~~~~ index.c:345:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 345 | fread(x, 8, 2, fp); | ^~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -c -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -Wno-unused-function -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I. map.c -o map.o ar -csru libminimap.a kthread.o misc.o bseq.o sketch.o sdust.o index.o map.o ar: `u' modifier ignored since `D' is the default (see `U') arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -Wno-unused-function -fPIC -Wl,-z,relro -Wl,-z,now main.o -o minimap -L. -lminimap -lm -lz -lpthread arm-linux-gnueabihf-gcc -shared -o libminimap.so.0 kthread.o misc.o bseq.o sketch.o sdust.o index.o map.o -fPIC -Wl,-soname,libminimap.so.0 -lm -lz -lpthread -Wl,-z,relro -Wl,-z,now make[1]: Leaving directory '/<>' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' ln -s libminimap.so.* libminimap.so d-shlibmove --commit \ --multiarch \ --devunversioned \ --movedev "*.h" /usr/include/minimap \ libminimap.so Library package automatic movement utility --> zlib1g-dev package exists. set -e install -d -m 755 debian/libminimap-dev/usr/lib/arm-linux-gnueabihf install -d -m 755 debian/libminimap0/usr/lib/arm-linux-gnueabihf mv ./libminimap.a debian/libminimap-dev/usr/lib/arm-linux-gnueabihf mv ./libminimap.la debian/libminimap-dev/usr/lib/arm-linux-gnueabihf || true mv ./libminimap.so debian/libminimap-dev/usr/lib/arm-linux-gnueabihf mv /<>/libminimap.so.0 debian/libminimap0/usr/lib/arm-linux-gnueabihf PKGDEV=libminimap-dev PKGSHL=libminimap0 install -d -m 755 debian/libminimap-dev//usr/include/minimap mv *.h debian/libminimap-dev//usr/include/minimap mv: cannot stat './libminimap.la': No such file or directory make[1]: Leaving directory '/<>' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: Depends field of package libminimap-dev: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: package libminimap-dev: substitution variable ${devlibs:Depends} unused, but is defined dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'minimap' in '../minimap_0.2-5_armhf.deb'. dpkg-deb: building package 'minimap-dbgsym' in '../minimap-dbgsym_0.2-5_armhf.deb'. dpkg-deb: building package 'libminimap0' in '../libminimap0_0.2-5_armhf.deb'. dpkg-deb: building package 'libminimap0-dbgsym' in '../libminimap0-dbgsym_0.2-5_armhf.deb'. dpkg-deb: building package 'libminimap-dev' in '../libminimap-dev_0.2-5_armhf.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../minimap_0.2-5_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-06-19T15:11:17Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ minimap_0.2-5_armhf.changes: ---------------------------- Format: 1.8 Date: Sat, 18 Apr 2020 14:33:15 +0200 Source: minimap Binary: libminimap-dev libminimap0 libminimap0-dbgsym minimap minimap-dbgsym Built-For-Profiles: cross nocheck Architecture: armhf Version: 0.2-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Sascha Steinbiss Description: libminimap-dev - development headers for libminimap libminimap0 - library for approximate mapping of long biosequences minimap - tool for approximate mapping of long biosequences such as DNA rea Changes: minimap (0.2-5) unstable; urgency=medium . * YAML lint and ref to conda (thanks Steffen Moeller). * Fix EDAM syntax (thanks Andreas Tille). * Use secure format URL in d/copyright. * Update copyright date in d/copyright. * Use debhelper-compat 12. * Bump Standards-Version. * Add missing DEP-12 fields. Checksums-Sha1: 816760da532314b4830cd969fa719b602da61b8c 31608 libminimap-dev_0.2-5_armhf.deb 5f26b5d16db60667428d5804032c32dfc84adf86 49572 libminimap0-dbgsym_0.2-5_armhf.deb 7de1a151459c01ebdab321118dfa71fef044a262 20556 libminimap0_0.2-5_armhf.deb 8c44c902f23c068e51e9e19f8499b76eebbc52e5 54912 minimap-dbgsym_0.2-5_armhf.deb c33454f40096eb40775661a67afdbce12e8062d2 5746 minimap_0.2-5_armhf.buildinfo 6c9a5b77f326b5169a6da7062431d8b00f9aa309 24732 minimap_0.2-5_armhf.deb Checksums-Sha256: eed078af1222c9618d420ab8e6e062dad91cb0a17ff1f3f69f0c7f7ff48de6cf 31608 libminimap-dev_0.2-5_armhf.deb 8b8cf2d9c2a94bd2f04a537d5496d8e5dcce07049ff766825840706d3a417af8 49572 libminimap0-dbgsym_0.2-5_armhf.deb d3a0667d148d97e25ff63c5f1c040ee3e9505b32e83c680405d0b5ec184fd028 20556 libminimap0_0.2-5_armhf.deb 3e8ab4b2a3cec7b69304b9e074a1fd7686d3a7bf771916bb77dcee2fed8036cd 54912 minimap-dbgsym_0.2-5_armhf.deb 1f98af82e4de996aa1a5ad08af6c3b2f9350ae5203f95b89312cfed05c68e866 5746 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libminimap-dev_0.2-5_armhf.deb 14307af911fb691a4ed7a0c47bce3971 49572 libminimap0-dbgsym_0.2-5_armhf.deb ee9d07f347ff9ed7df44fda4072b9b66 20556 libminimap0_0.2-5_armhf.deb a67a75eef362318373d9ba20747eab00 54912 minimap-dbgsym_0.2-5_armhf.deb ca2dffe122cb411bc78bf5865b7eb8f2 24732 minimap_0.2-5_armhf.deb Checksums-Sha1: 816760da532314b4830cd969fa719b602da61b8c 31608 libminimap-dev_0.2-5_armhf.deb 5f26b5d16db60667428d5804032c32dfc84adf86 49572 libminimap0-dbgsym_0.2-5_armhf.deb 7de1a151459c01ebdab321118dfa71fef044a262 20556 libminimap0_0.2-5_armhf.deb 8c44c902f23c068e51e9e19f8499b76eebbc52e5 54912 minimap-dbgsym_0.2-5_armhf.deb 6c9a5b77f326b5169a6da7062431d8b00f9aa309 24732 minimap_0.2-5_armhf.deb Checksums-Sha256: eed078af1222c9618d420ab8e6e062dad91cb0a17ff1f3f69f0c7f7ff48de6cf 31608 libminimap-dev_0.2-5_armhf.deb 8b8cf2d9c2a94bd2f04a537d5496d8e5dcce07049ff766825840706d3a417af8 49572 libminimap0-dbgsym_0.2-5_armhf.deb d3a0667d148d97e25ff63c5f1c040ee3e9505b32e83c680405d0b5ec184fd028 20556 libminimap0_0.2-5_armhf.deb 3e8ab4b2a3cec7b69304b9e074a1fd7686d3a7bf771916bb77dcee2fed8036cd 54912 minimap-dbgsym_0.2-5_armhf.deb d91b8266c1bcf6714875131ac007ba2437394939238a734b5a4c7a198b119479 24732 minimap_0.2-5_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Fri, 19 Jun 2020 15:11:17 +0000 Build-Path: /<> Installed-Build-Depends: adduser (= 3.118), apt (= 2.1.6), autoconf (= 2.69-11.1), automake (= 1:1.16.2-1), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-6), binutils (= 2.34-8), binutils-common (= 2.34-8), binutils-x86-64-linux-gnu (= 2.34-8), bsdmainutils (= 12.1.1), bsdutils (= 1:2.35.2-3), build-essential (= 12.8), bzip2 (= 1.0.8-3), coreutils (= 8.30-3+b1), cpp (= 4:9.2.1-3.1), cpp-9 (= 9.3.0-14), d-shlibs (= 0.93), dash (= 0.5.10.2-7), debconf (= 1.5.74), debhelper (= 13.1), debian-archive-keyring (= 2019.1), debianutils (= 4.11), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.8.1-1), diffutils (= 1:3.7-3), dpkg (= 1.19.7), dpkg-dev (= 1.19.7), dwz (= 0.13-5), file (= 1:5.38-5), findutils (= 4.7.0-1), g++ (= 4:9.2.1-3.1), g++-9 (= 9.3.0-14), gcc (= 4:9.2.1-3.1), gcc-10-base (= 10.1.0-4), gcc-9 (= 9.3.0-14), gcc-9-base (= 9.3.0-14), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), gpgv (= 2.2.20-1), grep (= 3.4-1), groff-base (= 1.22.4-5), gzip (= 1.10-2), hostname (= 3.23), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libapt-pkg6.0 (= 2.1.6), libarchive-zip-perl (= 1.68-1), libasan5 (= 9.3.0-14), libatomic1 (= 10.1.0-4), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3), libaudit1 (= 1:2.8.5-3+b1), libbinutils (= 2.34-8), libblkid1 (= 2.35.2-3), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.8-3), libc-bin (= 2.30-8), libc-dev-bin (= 2.30-8), libc6 (= 2.30-8), libc6-dev (= 2.30-8), libcap-ng0 (= 0.7.9-2.2), libcc1-0 (= 10.1.0-4), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.16-1), libcrypt1 (= 1:4.4.16-1), libctf-nobfd0 (= 2.34-8), libctf0 (= 2.34-8), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.252), libdebhelper-perl (= 13.1), libdpkg-perl (= 1.19.7), libelf1 (= 0.176-1.1), libffi7 (= 3.3-4), libfile-stripnondeterminism-perl (= 1.8.1-1), libgcc-9-dev (= 9.3.0-14), libgcc-s1 (= 10.1.0-4), libgcrypt20 (= 1.8.5-5), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libglib2.0-0 (= 2.64.3-1), libgmp10 (= 2:6.2.0+dfsg-6), libgnutls30 (= 3.6.14-2), libgomp1 (= 10.1.0-4), libgpg-error0 (= 1.38-1), libhogweed5 (= 3.5.1+really3.5.1-2), libicu67 (= 67.1-2), libidn2-0 (= 2.3.0-1), libisl22 (= 0.22.1-1), libitm1 (= 10.1.0-4), liblsan0 (= 10.1.0-4), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-5), libmagic1 (= 1:5.38-5), libmount1 (= 2.35.2-3), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libnettle7 (= 3.5.1+really3.5.1-2), libp11-kit0 (= 0.23.20-1), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-13), libperl5.30 (= 5.30.3-4), libpipeline1 (= 1.5.2-2), libquadmath0 (= 10.1.0-4), libseccomp2 (= 2.4.3-1+b1), libselinux1 (= 3.0-1+b3), libsemanage-common (= 3.0-1), libsemanage1 (= 3.0-1+b3), libsepol1 (= 3.0-1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.35.2-3), libstdc++-9-dev (= 9.3.0-14), libstdc++6 (= 10.1.0-4), libsub-override-perl (= 0.09-2), libsystemd0 (= 245.6-1), libtasn1-6 (= 4.16.0-2), libtinfo6 (= 6.2-1), libtool (= 2.4.6-14), libtsan0 (= 10.1.0-4), libubsan1 (= 10.1.0-4), libuchardet0 (= 0.0.7-1), libudev1 (= 245.6-1), libunistring2 (= 0.9.10-4), libuuid1 (= 2.35.2-3), libxml2 (= 2.9.10+dfsg-5+b1), libzstd1 (= 1.4.5+dfsg-2), linux-libc-dev (= 5.6.14-2), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.3-3), man-db (= 2.9.2-1), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2-1), ncurses-bin (= 6.2-1), passwd (= 1:4.8.1-1), patch (= 2.7.6-6), perl (= 5.30.3-4), perl-base (= 5.30.3-4), perl-modules-5.30 (= 5.30.3-4), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-3), tar (= 1.30+dfsg-7), util-linux (= 2.35.2-3), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1587213195" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libminimap-dev_0.2-5_armhf.deb ------------------------------ new Debian package, version 2.0. size 31608 bytes: control archive=1028 bytes. 687 bytes, 17 lines control 724 bytes, 11 lines md5sums Package: libminimap-dev Source: minimap Version: 0.2-5 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 102 Depends: libminimap0 (= 0.2-5), zlib1g-dev Section: libdevel Priority: optional Homepage: https://github.com/lh3/minimap Description: development headers for libminimap Minimap is an experimental tool to efficiently find multiple approximate mapping positions between two sets of long sequences, such as between DNA reads and reference genomes, between genomes and between long noisy reads. . This package contains the C library headers for using minimap in custom tools, along with a static library. drwxr-xr-x root/root 0 2020-04-18 12:33 ./ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/include/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/include/minimap/ -rw-r--r-- root/root 359 2015-12-07 02:29 ./usr/include/minimap/bseq.h -rw-r--r-- root/root 4294 2020-04-18 12:33 ./usr/include/minimap/kdq.h -rw-r--r-- root/root 21313 2015-12-07 02:29 ./usr/include/minimap/khash.h -rw-r--r-- root/root 8741 2015-12-07 02:29 ./usr/include/minimap/kseq.h -rw-r--r-- root/root 5390 2015-12-07 02:29 ./usr/include/minimap/ksort.h -rw-r--r-- root/root 3289 2015-12-07 02:29 ./usr/include/minimap/kvec.h -rw-r--r-- root/root 3053 2015-12-07 02:29 ./usr/include/minimap/minimap.h -rw-r--r-- root/root 539 2015-12-07 02:29 ./usr/include/minimap/sdust.h drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/lib/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/lib/arm-linux-gnueabihf/ -rw-r--r-- root/root 37268 2020-04-18 12:33 ./usr/lib/arm-linux-gnueabihf/libminimap.a lrwxrwxrwx root/root 0 2020-04-18 12:33 ./usr/lib/arm-linux-gnueabihf/libminimap.so -> libminimap.so.0 drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/share/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/share/doc/libminimap-dev/ -rw-r--r-- root/root 613 2020-04-18 12:33 ./usr/share/doc/libminimap-dev/changelog.Debian.gz -rw-r--r-- root/root 2191 2020-04-18 12:31 ./usr/share/doc/libminimap-dev/copyright libminimap0-dbgsym_0.2-5_armhf.deb ---------------------------------- new Debian package, version 2.0. size 49572 bytes: control archive=536 bytes. 377 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: libminimap0-dbgsym Source: minimap Version: 0.2-5 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 63 Depends: libminimap0 (= 0.2-5) Section: debug Priority: optional Description: debug symbols for libminimap0 Build-Ids: a4960a5a200b9b76f874d264eb104a968b31d21b drwxr-xr-x root/root 0 2020-04-18 12:33 ./ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/lib/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/lib/debug/.build-id/a4/ -rw-r--r-- root/root 54048 2020-04-18 12:33 ./usr/lib/debug/.build-id/a4/960a5a200b9b76f874d264eb104a968b31d21b.debug drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/share/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-04-18 12:33 ./usr/share/doc/libminimap0-dbgsym -> libminimap0 libminimap0_0.2-5_armhf.deb --------------------------- new Debian package, version 2.0. size 20556 bytes: control archive=900 bytes. 677 bytes, 17 lines control 228 bytes, 3 lines md5sums 34 bytes, 1 lines shlibs 65 bytes, 2 lines triggers Package: libminimap0 Source: minimap Version: 0.2-5 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 44 Depends: libc6 (>= 2.4), zlib1g (>= 1:1.1.4) Section: libs Priority: optional Homepage: https://github.com/lh3/minimap Description: library for approximate mapping of long biosequences Minimap is an experimental tool to efficiently find multiple approximate mapping positions between two sets of long sequences, such as between DNA reads and reference genomes, between genomes and between long noisy reads. . This package contains a shared library offering the minimap API to custom C programs. drwxr-xr-x root/root 0 2020-04-18 12:33 ./ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/lib/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/lib/arm-linux-gnueabihf/ -rw-r--r-- root/root 30220 2020-04-18 12:33 ./usr/lib/arm-linux-gnueabihf/libminimap.so.0 drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/share/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/share/doc/libminimap0/ -rw-r--r-- root/root 613 2020-04-18 12:33 ./usr/share/doc/libminimap0/changelog.Debian.gz -rw-r--r-- root/root 2191 2020-04-18 12:31 ./usr/share/doc/libminimap0/copyright minimap-dbgsym_0.2-5_armhf.deb ------------------------------ new Debian package, version 2.0. size 54912 bytes: control archive=528 bytes. 365 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: minimap-dbgsym Source: minimap Version: 0.2-5 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 70 Depends: minimap (= 0.2-5) Section: debug Priority: optional Description: debug symbols for minimap Build-Ids: 72e834397fb203d7023a200296cd291eec004580 drwxr-xr-x root/root 0 2020-04-18 12:33 ./ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/lib/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/lib/debug/.build-id/72/ -rw-r--r-- root/root 60532 2020-04-18 12:33 ./usr/lib/debug/.build-id/72/e834397fb203d7023a200296cd291eec004580.debug drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/share/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-04-18 12:33 ./usr/share/doc/minimap-dbgsym -> minimap minimap_0.2-5_armhf.deb ----------------------- new Debian package, version 2.0. size 24732 bytes: control archive=956 bytes. 972 bytes, 20 lines control 258 bytes, 4 lines md5sums Package: minimap Version: 0.2-5 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 50 Depends: libc6 (>= 2.4), zlib1g (>= 1:1.1.4) Section: science Priority: optional Homepage: https://github.com/lh3/minimap Description: tool for approximate mapping of long biosequences such as DNA reads Minimap is an experimental tool to efficiently find multiple approximate mapping positions between two sets of long biological sequences, such as between DNA reads and reference genomes, between genomes and between long noisy reads. Minimap does not generate alignments as of now and because of this, it is usually tens of times faster than mainstream aligners. It does not replace mainstream aligners, but it can be useful when you want to quickly identify long approximate matches at moderate divergence among a huge collection of sequences. For this task, it is much faster than most existing tools. drwxr-xr-x root/root 0 2020-04-18 12:33 ./ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/bin/ -rwxr-xr-x root/root 34472 2020-04-18 12:33 ./usr/bin/minimap drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/share/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/share/doc/minimap/ -rw-r--r-- root/root 613 2020-04-18 12:33 ./usr/share/doc/minimap/changelog.Debian.gz -rw-r--r-- root/root 2191 2020-04-18 12:31 ./usr/share/doc/minimap/copyright drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/share/man/ drwxr-xr-x root/root 0 2020-04-18 12:33 ./usr/share/man/man1/ -rw-r--r-- root/root 2365 2020-04-18 12:33 ./usr/share/man/man1/minimap.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [547 B] Get:5 copy:/<>/apt_archive ./ Packages [633 B] Fetched 2143 B in 0s (84.3 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-address-xs-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-socket-ssl-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl libmailtools-perl libmetrics-any-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtest-metrics-any-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libxml-parser-perl libdata-dump-perl ca-certificates libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libperl4-corelibs-perl libauthen-sasl-perl libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-address-xs-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-socket-ssl-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl libmailtools-perl libmetrics-any-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtest-metrics-any-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:armhf t1utils 0 upgraded, 83 newly installed, 0 to remove and 0 not upgraded. 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2.004000-1 [59.4 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1 [10.2 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b2 [12.0 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1 [13.5 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.114-1 [53.6 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.014+ds-1 [106 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.014+ds-1 [108 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.010002-1 [338 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b1 [20.2 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-writer-perl all 0.625-1 [29.7 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.82+repack-1 [35.6 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-3 [89.9 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.80.0 [1286 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 9426 kB in 0s (47.9 MB/s) Selecting previously unselected package readline-common. (Reading database ... 19958 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.1_all.deb ... Unpacking netbase (6.1) ... Selecting previously unselected package diffstat. Preparing to unpack .../03-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../04-libassuan0_2.5.3-7.1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7.1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.20-1_amd64.deb ... Unpacking gpgconf (2.2.20-1) ... Selecting previously unselected package libsqlite3-0:amd64. 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Setting up libmetrics-any-perl (0.05-2) ... Setting up libnumber-compare-perl (0.03-1) ... Setting up patchutils (0.3.4-3) ... Setting up libjson-maybexs-perl (1.004002-1) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up libdigest-hmac-perl (1.03+dfsg-2) ... Setting up libipc-system-simple-perl (1.30-1) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up libxml-writer-perl (0.625-1) ... Setting up t1utils (1.41-4) ... Setting up liblinux-epoll-perl (0.017-1) ... Setting up diffstat (1.63-1) ... Setting up libvariable-magic-perl (0.62-1+b2) ... Setting up libb-hooks-op-check-perl (0.22-1+b2) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3300-1) ... Setting up libsub-name-perl (0.26-1) ... Setting up libpath-tiny-perl (0.114-1) ... Setting up librole-tiny-perl (2.001004-1) ... Setting up netbase (6.1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b5) ... Setting up libexporter-tiny-perl (1.002002-1) ... Setting up libfont-ttf-perl (1.06-1) ... Setting up libnet-ip-perl (1.26-2) ... Setting up readline-common (8.0-4) ... Setting up libsereal-decoder-perl (4.014+ds-1) ... Setting up liburi-perl (1.76-2) ... Setting up libemail-address-xs-perl (1.04-1+b2) ... Setting up libnet-ssleay-perl (1.88-3) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b5) ... Setting up libreadline8:amd64 (8.0-4) ... Setting up libtype-tiny-perl (1.010002-1) ... Setting up libnet-dns-perl (1.24-1) ... Setting up libdevel-callchecker-perl (0.008-1+b1) ... Setting up libtest-metrics-any-perl (0.01-2) ... Setting up libio-async-perl (0.77-2) ... Setting up libhtml-parser-perl (3.72-5) ... Setting up gpgconf (2.2.20-1) ... Setting up libio-socket-ssl-perl (2.067-1) ... Setting up gpg (2.2.20-1) ... Setting up libparams-classify-perl (0.015-1+b2) ... Setting up libio-async-loop-epoll-perl (0.20-1) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libmailtools-perl (2.21-1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libemail-valid-perl (1.202-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.004000-1) ... Setting up libmoox-aliases-perl (0.001006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.80.0) ... Setting up sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Processing triggers for man-db (2.9.2-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.30-8) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 1560 Build-Time: 9 Distribution: unstable Foreign Architectures: armhf Host Architecture: armhf Install-Time: 18 Job: minimap_0.2-5 Lintian: pass Machine Architecture: amd64 Package: minimap Package-Time: 37 Source-Version: 0.2-5 Space: 1560 Status: successful Version: 0.2-5 -------------------------------------------------------------------------------- Finished at 2020-06-19T15:11:17Z Build needed 00:00:37, 1560k disk space