sbuild (Debian sbuild) 0.89.3+deb13u4 (28 December 2025) on mjolnir.einval.org +==============================================================================+ | mira 4.9.6-12 (amd64) Sat, 20 Jun 2026 17:24:58 +0000 | +==============================================================================+ Package: mira Version: 4.9.6-12 Source Version: 4.9.6-12 Distribution: unstable Machine Architecture: arm64 Host Architecture: amd64 Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any I: Unpacking /home/helmut/.cache/sbuild/unstable-arm64-sbuild.tar.zst to /tmp/tmp.sbuild.GijM9EgWI8... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Update chroot Sat, 20 Jun 2026 17:25:15 +0000 | +------------------------------------------------------------------------------+ Get:1 http://mirror.einval.org/debian unstable InRelease [189 kB] Get:2 http://mirror.einval.org/debian unstable/main Sources [11.6 MB] Get:3 http://mirror.einval.org/debian unstable/main arm64 Packages [10.5 MB] Get:4 http://mirror.einval.org/debian unstable/main amd64 Packages [10.5 MB] Fetched 32.8 MB in 8s (4330 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: binutils binutils-aarch64-linux-gnu binutils-common cpp-15 cpp-15-aarch64-linux-gnu g++-15 g++-15-aarch64-linux-gnu gcc-15 gcc-15-aarch64-linux-gnu gcc-15-base gcc-16-base libasan8 libatomic1 libbinutils libblkid1 libc-bin libc-dev-bin libc-gconv-modules-extra libc6 libc6-dev libcc1-0 libctf-nobfd0 libctf0 libgcc-15-dev libgcc-s1 libgomp1 libgprofng0 libhwasan0 libitm1 liblsan0 libmount1 libpam-modules libpam-modules-bin libpam-runtime libpam0g libsframe3 libsmartcols1 libstdc++-15-dev libstdc++6 libsystemd0 libtsan2 libubsan1 libudev1 libuuid1 linux-libc-dev login util-linux 47 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 71.6 MB of archives. After this operation, 63.5 kB of additional disk space will be used. Get:1 http://mirror.einval.org/debian unstable/main arm64 libc-dev-bin arm64 2.42-17 [37.0 kB] Get:2 http://mirror.einval.org/debian unstable/main arm64 binutils-aarch64-linux-gnu arm64 2.46.50.20260617-1 [879 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 binutils-common arm64 2.46.50.20260617-1 [2636 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 libgprofng0 arm64 2.46.50.20260617-1 [679 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 libctf0 arm64 2.46.50.20260617-1 [86.1 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 libctf-nobfd0 arm64 2.46.50.20260617-1 [155 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 libbinutils arm64 2.46.50.20260617-1 [685 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 binutils arm64 2.46.50.20260617-1 [279 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 libc6-dev arm64 2.42-17 [1615 kB] Get:10 http://mirror.einval.org/debian unstable/main arm64 libc-gconv-modules-extra arm64 2.42-17 [1129 kB] Get:11 http://mirror.einval.org/debian unstable/main arm64 libc6 arm64 2.42-17 [1384 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 libsframe3 arm64 2.46.50.20260617-1 [85.0 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 libasan8 arm64 16.1.0-2 [2672 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 libubsan1 arm64 16.1.0-2 [1079 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 libstdc++-15-dev arm64 15.3.0-1 [2655 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 gcc-15 arm64 15.3.0-1 [535 kB] Get:17 http://mirror.einval.org/debian unstable/main arm64 g++-15 arm64 15.3.0-1 [28.7 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 g++-15-aarch64-linux-gnu arm64 15.3.0-1 [11.1 MB] Get:19 http://mirror.einval.org/debian unstable/main arm64 gcc-15-aarch64-linux-gnu arm64 15.3.0-1 [19.6 MB] Get:20 http://mirror.einval.org/debian unstable/main arm64 cpp-15-aarch64-linux-gnu arm64 15.3.0-1 [10.2 MB] Get:21 http://mirror.einval.org/debian unstable/main arm64 cpp-15 arm64 15.3.0-1 [1280 B] Get:22 http://mirror.einval.org/debian unstable/main arm64 gcc-15-base arm64 15.3.0-1 [37.4 kB] Get:23 http://mirror.einval.org/debian unstable/main arm64 libgcc-15-dev arm64 15.3.0-1 [2372 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 libtsan2 arm64 16.1.0-2 [2448 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 liblsan0 arm64 16.1.0-2 [1212 kB] Get:26 http://mirror.einval.org/debian unstable/main arm64 libitm1 arm64 16.1.0-2 [24.3 kB] Get:27 http://mirror.einval.org/debian unstable/main arm64 libhwasan0 arm64 16.1.0-2 [1505 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 libgomp1 arm64 16.1.0-2 [132 kB] Get:29 http://mirror.einval.org/debian unstable/main arm64 gcc-16-base arm64 16.1.0-2 [36.8 kB] Get:30 http://mirror.einval.org/debian unstable/main arm64 libgcc-s1 arm64 16.1.0-2 [53.2 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 libcc1-0 arm64 16.1.0-2 [43.6 kB] Get:32 http://mirror.einval.org/debian unstable/main arm64 libatomic1 arm64 16.1.0-2 [9780 B] Get:33 http://mirror.einval.org/debian unstable/main arm64 libstdc++6 arm64 16.1.0-2 [701 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 linux-libc-dev all 7.0.13-1 [2021 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 libsystemd0 arm64 261-1 [424 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 libsmartcols1 arm64 2.42.2-1 [138 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libuuid1 arm64 2.42.2-1 [32.8 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 libblkid1 arm64 2.42.2-1 [165 kB] Get:39 http://mirror.einval.org/debian unstable/main arm64 libmount1 arm64 2.42.2-1 [200 kB] Get:40 http://mirror.einval.org/debian unstable/main arm64 util-linux arm64 2.42.2-1 [1184 kB] Get:41 http://mirror.einval.org/debian unstable/main arm64 libc-bin arm64 2.42-17 [531 kB] Get:42 http://mirror.einval.org/debian unstable/main arm64 libpam-runtime all 1.7.0-6 [245 kB] Get:43 http://mirror.einval.org/debian unstable/main arm64 libpam0g arm64 1.7.0-6 [64.7 kB] Get:44 http://mirror.einval.org/debian unstable/main arm64 libpam-modules-bin arm64 1.7.0-6 [44.4 kB] Get:45 http://mirror.einval.org/debian unstable/main arm64 libpam-modules arm64 1.7.0-6 [161 kB] Get:46 http://mirror.einval.org/debian unstable/main arm64 login arm64 1:4.16.0-2+really2.42.2-1 [120 kB] Get:47 http://mirror.einval.org/debian unstable/main arm64 libudev1 arm64 261-1 [128 kB] Preconfiguring packages ... Fetched 71.6 MB in 1s (59.1 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12136 files and directories currently installed.) Preparing to unpack .../0-libc-dev-bin_2.42-17_arm64.deb ... Unpacking libc-dev-bin (2.42-17) over (2.42-16) ... Preparing to unpack .../1-binutils-aarch64-linux-gnu_2.46.50.20260617-1_arm64.deb ... Unpacking binutils-aarch64-linux-gnu (2.46.50.20260617-1) over (2.46.50.20260608-1) ... Preparing to unpack .../2-binutils-common_2.46.50.20260617-1_arm64.deb ... Unpacking binutils-common:arm64 (2.46.50.20260617-1) over (2.46.50.20260608-1) ... Preparing to unpack .../3-libgprofng0_2.46.50.20260617-1_arm64.deb ... Unpacking libgprofng0:arm64 (2.46.50.20260617-1) over (2.46.50.20260608-1) ... Preparing to unpack .../4-libctf0_2.46.50.20260617-1_arm64.deb ... Unpacking libctf0:arm64 (2.46.50.20260617-1) over (2.46.50.20260608-1) ... Preparing to unpack .../5-libctf-nobfd0_2.46.50.20260617-1_arm64.deb ... Unpacking libctf-nobfd0:arm64 (2.46.50.20260617-1) over (2.46.50.20260608-1) ... Preparing to unpack .../6-libbinutils_2.46.50.20260617-1_arm64.deb ... Unpacking libbinutils:arm64 (2.46.50.20260617-1) over (2.46.50.20260608-1) ... Preparing to unpack .../7-binutils_2.46.50.20260617-1_arm64.deb ... Unpacking binutils (2.46.50.20260617-1) over (2.46.50.20260608-1) ... Preparing to unpack .../8-libc6-dev_2.42-17_arm64.deb ... Unpacking libc6-dev:arm64 (2.42-17) over (2.42-16) ... Preparing to unpack .../9-libc-gconv-modules-extra_2.42-17_arm64.deb ... Unpacking libc-gconv-modules-extra:arm64 (2.42-17) over (2.42-16) ... Setting up libc-gconv-modules-extra:arm64 (2.42-17) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12136 files and directories currently installed.) Preparing to unpack .../libc6_2.42-17_arm64.deb ... Unpacking libc6:arm64 (2.42-17) over (2.42-16) ... Setting up libc6:arm64 (2.42-17) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12136 files and directories currently installed.) Preparing to unpack .../00-libsframe3_2.46.50.20260617-1_arm64.deb ... Unpacking libsframe3:arm64 (2.46.50.20260617-1) over (2.46.50.20260608-1) ... Preparing to unpack .../01-libasan8_16.1.0-2_arm64.deb ... Unpacking libasan8:arm64 (16.1.0-2) over (16.1.0-1) ... Preparing to unpack .../02-libubsan1_16.1.0-2_arm64.deb ... Unpacking libubsan1:arm64 (16.1.0-2) over (16.1.0-1) ... Preparing to unpack .../03-libstdc++-15-dev_15.3.0-1_arm64.deb ... Unpacking libstdc++-15-dev:arm64 (15.3.0-1) over (15.2.0-17) ... Preparing to unpack .../04-gcc-15_15.3.0-1_arm64.deb ... Unpacking gcc-15 (15.3.0-1) over (15.2.0-17) ... Preparing to unpack .../05-g++-15_15.3.0-1_arm64.deb ... Unpacking g++-15 (15.3.0-1) over (15.2.0-17) ... Preparing to unpack .../06-g++-15-aarch64-linux-gnu_15.3.0-1_arm64.deb ... Unpacking g++-15-aarch64-linux-gnu (15.3.0-1) over (15.2.0-17) ... Preparing to unpack .../07-gcc-15-aarch64-linux-gnu_15.3.0-1_arm64.deb ... Unpacking gcc-15-aarch64-linux-gnu (15.3.0-1) over (15.2.0-17) ... Preparing to unpack .../08-cpp-15-aarch64-linux-gnu_15.3.0-1_arm64.deb ... Unpacking cpp-15-aarch64-linux-gnu (15.3.0-1) over (15.2.0-17) ... Preparing to unpack .../09-cpp-15_15.3.0-1_arm64.deb ... Unpacking cpp-15 (15.3.0-1) over (15.2.0-17) ... Preparing to unpack .../10-gcc-15-base_15.3.0-1_arm64.deb ... Unpacking gcc-15-base:arm64 (15.3.0-1) over (15.2.0-17) ... Preparing to unpack .../11-libgcc-15-dev_15.3.0-1_arm64.deb ... Unpacking libgcc-15-dev:arm64 (15.3.0-1) over (15.2.0-17) ... Preparing to unpack .../12-libtsan2_16.1.0-2_arm64.deb ... Unpacking libtsan2:arm64 (16.1.0-2) over (16.1.0-1) ... Preparing to unpack .../13-liblsan0_16.1.0-2_arm64.deb ... Unpacking liblsan0:arm64 (16.1.0-2) over (16.1.0-1) ... Preparing to unpack .../14-libitm1_16.1.0-2_arm64.deb ... Unpacking libitm1:arm64 (16.1.0-2) over (16.1.0-1) ... Preparing to unpack .../15-libhwasan0_16.1.0-2_arm64.deb ... Unpacking libhwasan0:arm64 (16.1.0-2) over (16.1.0-1) ... Preparing to unpack .../16-libgomp1_16.1.0-2_arm64.deb ... Unpacking libgomp1:arm64 (16.1.0-2) over (16.1.0-1) ... Preparing to unpack .../17-gcc-16-base_16.1.0-2_arm64.deb ... Unpacking gcc-16-base:arm64 (16.1.0-2) over (16.1.0-1) ... Setting up gcc-16-base:arm64 (16.1.0-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12136 files and directories currently installed.) Preparing to unpack .../libgcc-s1_16.1.0-2_arm64.deb ... Unpacking libgcc-s1:arm64 (16.1.0-2) over (16.1.0-1) ... Setting up libgcc-s1:arm64 (16.1.0-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12136 files and directories currently installed.) Preparing to unpack .../libcc1-0_16.1.0-2_arm64.deb ... Unpacking libcc1-0:arm64 (16.1.0-2) over (16.1.0-1) ... Preparing to unpack .../libatomic1_16.1.0-2_arm64.deb ... Unpacking libatomic1:arm64 (16.1.0-2) over (16.1.0-1) ... Preparing to unpack .../libstdc++6_16.1.0-2_arm64.deb ... Unpacking libstdc++6:arm64 (16.1.0-2) over (16.1.0-1) ... Setting up libstdc++6:arm64 (16.1.0-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12136 files and directories currently installed.) Preparing to unpack .../linux-libc-dev_7.0.13-1_all.deb ... Unpacking linux-libc-dev (7.0.13-1) over (7.0.12-2) ... Preparing to unpack .../libsystemd0_261-1_arm64.deb ... Unpacking libsystemd0:arm64 (261-1) over (261~rc3-1) ... Setting up libsystemd0:arm64 (261-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12136 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.42.2-1_arm64.deb ... Unpacking libsmartcols1:arm64 (2.42.2-1) over (2.42.1-3) ... Setting up libsmartcols1:arm64 (2.42.2-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12136 files and directories currently installed.) Preparing to unpack .../libuuid1_2.42.2-1_arm64.deb ... Unpacking libuuid1:arm64 (2.42.2-1) over (2.42.1-3) ... Setting up libuuid1:arm64 (2.42.2-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12136 files and directories currently installed.) Preparing to unpack .../libblkid1_2.42.2-1_arm64.deb ... Unpacking libblkid1:arm64 (2.42.2-1) over (2.42.1-3) ... Setting up libblkid1:arm64 (2.42.2-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12136 files and directories currently installed.) Preparing to unpack .../libmount1_2.42.2-1_arm64.deb ... Unpacking libmount1:arm64 (2.42.2-1) over (2.42.1-3) ... Setting up libmount1:arm64 (2.42.2-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12136 files and directories currently installed.) Preparing to unpack .../util-linux_2.42.2-1_arm64.deb ... Unpacking util-linux (2.42.2-1) over (2.42.1-3) ... Setting up util-linux (2.42.2-1) ... Installing new version of config file /etc/pam.d/runuser-l ... Installing new version of config file /etc/pam.d/su ... Installing new version of config file /etc/pam.d/su-l ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12137 files and directories currently installed.) Preparing to unpack .../libc-bin_2.42-17_arm64.deb ... Unpacking libc-bin (2.42-17) over (2.42-16) ... Setting up libc-bin (2.42-17) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12137 files and directories currently installed.) Preparing to unpack .../libpam-runtime_1.7.0-6_all.deb ... Unpacking libpam-runtime (1.7.0-6) over (1.7.0-5) ... Setting up libpam-runtime (1.7.0-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12137 files and directories currently installed.) Preparing to unpack .../libpam0g_1.7.0-6_arm64.deb ... Unpacking libpam0g:arm64 (1.7.0-6) over (1.7.0-5+b2) ... Setting up libpam0g:arm64 (1.7.0-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12136 files and directories currently installed.) Preparing to unpack .../libpam-modules-bin_1.7.0-6_arm64.deb ... Unpacking libpam-modules-bin (1.7.0-6) over (1.7.0-5+b2) ... Setting up libpam-modules-bin (1.7.0-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12135 files and directories currently installed.) Preparing to unpack .../libpam-modules_1.7.0-6_arm64.deb ... Unpacking libpam-modules:arm64 (1.7.0-6) over (1.7.0-5+b2) ... Setting up libpam-modules:arm64 (1.7.0-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12134 files and directories currently installed.) Preparing to unpack .../login_1%3a4.16.0-2+really2.42.2-1_arm64.deb ... Unpacking login (1:4.16.0-2+really2.42.2-1) over (1:4.16.0-2+really2.42.1-3) ... Preparing to unpack .../libudev1_261-1_arm64.deb ... Unpacking libudev1:arm64 (261-1) over (261~rc3-1) ... Setting up libudev1:arm64 (261-1) ... Setting up binutils-common:arm64 (2.46.50.20260617-1) ... Setting up libsframe3:arm64 (2.46.50.20260617-1) ... Setting up linux-libc-dev (7.0.13-1) ... Setting up libctf-nobfd0:arm64 (2.46.50.20260617-1) ... Setting up libgomp1:arm64 (16.1.0-2) ... Setting up libatomic1:arm64 (16.1.0-2) ... Setting up libubsan1:arm64 (16.1.0-2) ... Setting up libhwasan0:arm64 (16.1.0-2) ... Setting up libasan8:arm64 (16.1.0-2) ... Setting up libtsan2:arm64 (16.1.0-2) ... Setting up libbinutils:arm64 (2.46.50.20260617-1) ... Setting up libc-dev-bin (2.42-17) ... Setting up gcc-15-base:arm64 (15.3.0-1) ... Setting up libcc1-0:arm64 (16.1.0-2) ... Setting up liblsan0:arm64 (16.1.0-2) ... Setting up libitm1:arm64 (16.1.0-2) ... Setting up login (1:4.16.0-2+really2.42.2-1) ... Installing new version of config file /etc/pam.d/login ... Installing new version of config file /etc/pam.d/remote ... Setting up libctf0:arm64 (2.46.50.20260617-1) ... Setting up cpp-15-aarch64-linux-gnu (15.3.0-1) ... Setting up libgcc-15-dev:arm64 (15.3.0-1) ... Setting up binutils-aarch64-linux-gnu (2.46.50.20260617-1) ... Setting up libgprofng0:arm64 (2.46.50.20260617-1) ... Setting up cpp-15 (15.3.0-1) ... Setting up libc6-dev:arm64 (2.42-17) ... Setting up gcc-15-aarch64-linux-gnu (15.3.0-1) ... Setting up binutils (2.46.50.20260617-1) ... Setting up gcc-15 (15.3.0-1) ... Setting up libstdc++-15-dev:arm64 (15.3.0-1) ... Setting up g++-15-aarch64-linux-gnu (15.3.0-1) ... Setting up g++-15 (15.3.0-1) ... Processing triggers for libc-bin (2.42-17) ... +------------------------------------------------------------------------------+ | Fetch source files Sat, 20 Jun 2026 17:25:50 +0000 | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'mira' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/mira.git Please use: git clone https://salsa.debian.org/med-team/mira.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 15.0 MB of source archives. Get:1 http://mirror.einval.org/debian unstable/main mira 4.9.6-12 (dsc) [2417 B] Get:2 http://mirror.einval.org/debian unstable/main mira 4.9.6-12 (tar) [15.0 MB] Get:3 http://mirror.einval.org/debian unstable/main mira 4.9.6-12 (diff) [34.7 kB] Fetched 15.0 MB in 0s (63.9 MB/s) Download complete and in download only mode +------------------------------------------------------------------------------+ | Install package build dependencies Sat, 20 Jun 2026 17:25:52 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), autoconf-archive, libbz2-dev, libexpat1-dev, libgoogle-perftools-dev, flex, libfl-dev, xxd, zlib1g-dev, libboost-thread-dev, libboost-regex-dev, libboost-filesystem-dev, libboost-iostreams-dev, libc-dev, libstdc++-dev, build-essential:arm64, crossbuild-essential-amd64:arm64, apt-utils:arm64, libc-dev:amd64, libstdc++-dev:amd64 Filtered Build-Depends: debhelper-compat (= 13), autoconf-archive, libbz2-dev, libexpat1-dev, libgoogle-perftools-dev, flex, libfl-dev, xxd, zlib1g-dev, libboost-thread-dev, libboost-regex-dev, libboost-filesystem-dev, libboost-iostreams-dev, libc-dev, libstdc++-dev, build-essential:arm64, crossbuild-essential-amd64:arm64, apt-utils:arm64, libc-dev:amd64, libstdc++-dev:amd64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-F4BPLv/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/build/reproducible-path/resolver-F4BPLv/apt_archive ./ InRelease Get:2 copy:/build/reproducible-path/resolver-F4BPLv/apt_archive ./ Release [609 B] Ign:3 copy:/build/reproducible-path/resolver-F4BPLv/apt_archive ./ Release.gpg Get:4 copy:/build/reproducible-path/resolver-F4BPLv/apt_archive ./ Sources [922 B] Get:5 copy:/build/reproducible-path/resolver-F4BPLv/apt_archive ./ Packages [952 B] Fetched 2483 B in 0s (117 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf autoconf-archive automake autopoint autotools-dev binutils-x86-64-linux-gnu bsdextrautils cpp-15-x86-64-linux-gnu cpp-x86-64-linux-gnu crossbuild-essential-amd64 debhelper dh-autoreconf dh-strip-nondeterminism dwz file flex g++-15-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-15-base:amd64 gcc-15-cross-base gcc-15-x86-64-linux-gnu gcc-15-x86-64-linux-gnu-base gcc-16-base:amd64 gcc-16-cross-base gcc-x86-64-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan8:amd64 libasan8-amd64-cross libatomic1:amd64 libatomic1-amd64-cross libboost-atomic1.90-dev:amd64 libboost-atomic1.90.0:amd64 libboost-chrono1.90-dev:amd64 libboost-chrono1.90.0:amd64 libboost-container1.90-dev:amd64 libboost-container1.90.0:amd64 libboost-date-time1.90-dev:amd64 libboost-date-time1.90.0:amd64 libboost-exception1.90-dev:amd64 libboost-filesystem-dev:amd64 libboost-filesystem1.90-dev:amd64 libboost-filesystem1.90.0:amd64 libboost-iostreams-dev:amd64 libboost-iostreams1.90-dev:amd64 libboost-iostreams1.90.0:amd64 libboost-random1.90-dev:amd64 libboost-random1.90.0:amd64 libboost-regex-dev:amd64 libboost-regex1.90-dev:amd64 libboost-regex1.90.0:amd64 libboost-serialization1.90-dev:amd64 libboost-serialization1.90.0:amd64 libboost-thread-dev:amd64 libboost-thread1.90-dev:amd64 libboost-thread1.90.0:amd64 libboost1.90-dev:amd64 libbz2-1.0:amd64 libbz2-dev:amd64 libc-gconv-modules-extra:amd64 libc6:amd64 libc6-amd64-cross libc6-dev:amd64 libc6-dev-amd64-cross libdebhelper-perl libelf1t64 libexpat1:amd64 libexpat1-dev:amd64 libfile-stripnondeterminism-perl libfl-dev:amd64 libfl2:amd64 libgcc-15-dev:amd64 libgcc-15-dev-amd64-cross libgcc-s1:amd64 libgcc-s1-amd64-cross libgomp1:amd64 libgomp1-amd64-cross libgoogle-perftools-dev:amd64 libgoogle-perftools4t64:amd64 libhwasan0:amd64 libhwasan0-amd64-cross libitm1:amd64 libitm1-amd64-cross liblsan0:amd64 liblsan0-amd64-cross liblzma-dev:amd64 liblzma5:amd64 libmagic-mgc libmagic1t64 libpipeline1 libquadmath0:amd64 libquadmath0-amd64-cross libstdc++-15-dev:amd64 libstdc++-15-dev-amd64-cross libstdc++6:amd64 libstdc++6-amd64-cross libtcmalloc-minimal4t64:amd64 libtool libtsan2:amd64 libtsan2-amd64-cross libubsan1:amd64 libubsan1-amd64-cross libuchardet0 libunistring5 libunwind-dev:amd64 libunwind8:amd64 libxml2-16 libzstd1:amd64 linux-libc-dev-amd64-cross m4 man-db po-debconf sensible-utils xxd zlib1g:amd64 zlib1g-dev:amd64 Suggested packages: gnu-standards autoconf-doc binutils-doc gcc-15-locales cpp-15-doc cpp-doc dh-make bison flex-doc gcc-15-doc manpages-dev gdb-x86-64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev gnulib-l10n groff libboost1.90-doc:amd64 libboost-context1.90-dev:amd64 libboost-contract1.90-dev:amd64 libboost-coroutine1.90-dev:amd64 libboost-fiber1.90-dev:amd64 libboost-graph-parallel1.90-dev:amd64 libboost-graph1.90-dev:amd64 libboost-json1.90-dev:amd64 libboost-locale1.90-dev:amd64 libboost-log1.90-dev:amd64 libboost-math1.90-dev:amd64 libboost-mpi-python1.90-dev:amd64 libboost-mpi1.90-dev:amd64 libboost-nowide1.90-dev:amd64 libboost-numpy1.90-dev:amd64 libboost-program-options1.90-dev:amd64 libboost-python1.90-dev:amd64 libboost-stacktrace1.90-dev:amd64 libboost-test1.90-dev:amd64 libboost-timer1.90-dev:amd64 libboost-type-erasure1.90-dev:amd64 libboost-url1.90-dev:amd64 libboost-wave1.90-dev:amd64 libboost1.90-tools-dev:amd64 libmpfrc++-dev:amd64 libntl-dev:amd64 glibc-doc:amd64 libc-l10n:amd64 locales:amd64 libnss-nis:amd64 manpages-dev:amd64 liblzma-doc:amd64 libstdc++-15-doc:amd64 libtool-doc gfortran | fortran95-compiler m4-doc apparmor less www-browser libmail-box-perl Recommended packages: libfl-dev curl | wget | lynx python3:any bzip2-doc:amd64 libidn2-0:amd64 libarchive-cpio-perl libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf autoconf-archive automake autopoint autotools-dev binutils-x86-64-linux-gnu bsdextrautils cpp-15-x86-64-linux-gnu cpp-x86-64-linux-gnu crossbuild-essential-amd64 debhelper dh-autoreconf dh-strip-nondeterminism dwz file flex g++-15-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-15-base:amd64 gcc-15-cross-base gcc-15-x86-64-linux-gnu gcc-15-x86-64-linux-gnu-base gcc-16-base:amd64 gcc-16-cross-base gcc-x86-64-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan8:amd64 libasan8-amd64-cross libatomic1:amd64 libatomic1-amd64-cross libboost-atomic1.90-dev:amd64 libboost-atomic1.90.0:amd64 libboost-chrono1.90-dev:amd64 libboost-chrono1.90.0:amd64 libboost-container1.90-dev:amd64 libboost-container1.90.0:amd64 libboost-date-time1.90-dev:amd64 libboost-date-time1.90.0:amd64 libboost-exception1.90-dev:amd64 libboost-filesystem-dev:amd64 libboost-filesystem1.90-dev:amd64 libboost-filesystem1.90.0:amd64 libboost-iostreams-dev:amd64 libboost-iostreams1.90-dev:amd64 libboost-iostreams1.90.0:amd64 libboost-random1.90-dev:amd64 libboost-random1.90.0:amd64 libboost-regex-dev:amd64 libboost-regex1.90-dev:amd64 libboost-regex1.90.0:amd64 libboost-serialization1.90-dev:amd64 libboost-serialization1.90.0:amd64 libboost-thread-dev:amd64 libboost-thread1.90-dev:amd64 libboost-thread1.90.0:amd64 libboost1.90-dev:amd64 libbz2-1.0:amd64 libbz2-dev:amd64 libc-gconv-modules-extra:amd64 libc6:amd64 libc6-amd64-cross libc6-dev:amd64 libc6-dev-amd64-cross libdebhelper-perl libelf1t64 libexpat1:amd64 libexpat1-dev:amd64 libfile-stripnondeterminism-perl libfl-dev:amd64 libfl2:amd64 libgcc-15-dev:amd64 libgcc-15-dev-amd64-cross libgcc-s1:amd64 libgcc-s1-amd64-cross libgomp1:amd64 libgomp1-amd64-cross libgoogle-perftools-dev:amd64 libgoogle-perftools4t64:amd64 libhwasan0:amd64 libhwasan0-amd64-cross libitm1:amd64 libitm1-amd64-cross liblsan0:amd64 liblsan0-amd64-cross liblzma-dev:amd64 liblzma5:amd64 libmagic-mgc libmagic1t64 libpipeline1 libquadmath0:amd64 libquadmath0-amd64-cross libstdc++-15-dev:amd64 libstdc++-15-dev-amd64-cross libstdc++6:amd64 libstdc++6-amd64-cross libtcmalloc-minimal4t64:amd64 libtool libtsan2:amd64 libtsan2-amd64-cross libubsan1:amd64 libubsan1-amd64-cross libuchardet0 libunistring5 libunwind-dev:amd64 libunwind8:amd64 libxml2-16 libzstd1:amd64 linux-libc-dev-amd64-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:amd64 sensible-utils xxd zlib1g:amd64 zlib1g-dev:amd64 0 upgraded, 120 newly installed, 0 to remove and 0 not upgraded. Need to get 122 MB of archives. After this operation, 664 MB of additional disk space will be used. Get:1 copy:/build/reproducible-path/resolver-F4BPLv/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [984 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 autoconf-archive all 20241016-3 [797 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 m4 arm64 1.4.21-1 [323 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 flex arm64 2.6.4-8.2+b5 [411 kB] Get:5 http://mirror.einval.org/debian unstable/main amd64 gcc-16-base amd64 16.1.0-2 [36.8 kB] Get:6 http://mirror.einval.org/debian unstable/main amd64 libgcc-s1 amd64 16.1.0-2 [74.1 kB] Get:7 http://mirror.einval.org/debian unstable/main amd64 libc-gconv-modules-extra amd64 2.42-17 [1097 kB] Get:8 http://mirror.einval.org/debian unstable/main amd64 libc6 amd64 2.42-17 [1790 kB] Get:9 http://mirror.einval.org/debian unstable/main amd64 libexpat1 amd64 2.8.1-1 [117 kB] Get:10 http://mirror.einval.org/debian unstable/main arm64 sensible-utils all 0.0.26 [27.0 kB] Get:11 http://mirror.einval.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.47-4 [345 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.47-4 [104 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 file arm64 1:5.47-4 [43.2 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 gettext-base arm64 1.0-1 [329 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-2+b2 [69.1 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 groff-base arm64 1.24.1-1 [1270 kB] Get:17 http://mirror.einval.org/debian unstable/main arm64 bsdextrautils arm64 2.42.2-1 [98.4 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-3 [47.2 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 man-db arm64 2.13.1-1+b1 [1455 kB] Get:20 http://mirror.einval.org/debian unstable/main arm64 autoconf all 2.73-2 [516 kB] Get:21 http://mirror.einval.org/debian unstable/main arm64 autotools-dev all 20240727.1+nmu1 [60.0 kB] Get:22 http://mirror.einval.org/debian unstable/main arm64 automake all 1:1.18.1-4 [877 kB] Get:23 http://mirror.einval.org/debian unstable/main arm64 autopoint all 1.0-1 [820 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 gcc-15-x86-64-linux-gnu-base arm64 15.3.0-1cross1 [37.6 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 cpp-15-x86-64-linux-gnu arm64 15.3.0-1cross1 [11.3 MB] Get:26 http://mirror.einval.org/debian unstable/main arm64 cpp-x86-64-linux-gnu arm64 4:15.2.0-5+b1 [4644 B] Get:27 http://mirror.einval.org/debian unstable/main arm64 binutils-x86-64-linux-gnu arm64 2.46.50.20260617-1 [1532 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 gcc-15-cross-base all 15.3.0-1cross1 [32.9 kB] Get:29 http://mirror.einval.org/debian unstable/main arm64 gcc-16-cross-base all 16.1.0-2cross1 [32.5 kB] Get:30 http://mirror.einval.org/debian unstable/main arm64 libgcc-s1-amd64-cross all 16.1.0-2cross1 [74.1 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 libgomp1-amd64-cross all 16.1.0-2cross1 [146 kB] Get:32 http://mirror.einval.org/debian unstable/main arm64 libitm1-amd64-cross all 16.1.0-2cross1 [27.0 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 libatomic1-amd64-cross all 16.1.0-2cross1 [10.5 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 libasan8-amd64-cross all 16.1.0-2cross1 [2878 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 liblsan0-amd64-cross all 16.1.0-2cross1 [1279 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 libtsan2-amd64-cross all 16.1.0-2cross1 [2561 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libc6-amd64-cross all 2.42-12cross1 [1577 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 libstdc++6-amd64-cross all 16.1.0-2cross1 [799 kB] Get:39 http://mirror.einval.org/debian unstable/main arm64 libubsan1-amd64-cross all 16.1.0-2cross1 [1135 kB] Get:40 http://mirror.einval.org/debian unstable/main arm64 libhwasan0-amd64-cross all 16.1.0-2cross1 [1575 kB] Get:41 http://mirror.einval.org/debian unstable/main arm64 libquadmath0-amd64-cross all 16.1.0-2cross1 [148 kB] Get:42 http://mirror.einval.org/debian unstable/main arm64 libgcc-15-dev-amd64-cross all 15.3.0-1cross1 [2704 kB] Get:43 http://mirror.einval.org/debian unstable/main arm64 gcc-15-x86-64-linux-gnu arm64 15.3.0-1cross1 [21.8 MB] Get:44 http://mirror.einval.org/debian unstable/main arm64 gcc-x86-64-linux-gnu arm64 4:15.2.0-5+b1 [1452 B] Get:45 http://mirror.einval.org/debian unstable/main arm64 linux-libc-dev-amd64-cross all 7.0.13-1 [12.5 kB] Get:46 http://mirror.einval.org/debian unstable/main arm64 libc6-dev-amd64-cross all 2.42-12cross1 [2010 kB] Get:47 http://mirror.einval.org/debian unstable/main arm64 libstdc++-15-dev-amd64-cross all 15.3.0-1cross1 [2738 kB] Get:48 http://mirror.einval.org/debian unstable/main arm64 g++-15-x86-64-linux-gnu arm64 15.3.0-1cross1 [12.3 MB] Get:49 http://mirror.einval.org/debian unstable/main arm64 g++-x86-64-linux-gnu arm64 4:15.2.0-5+b1 [1208 B] Get:50 http://mirror.einval.org/debian unstable/main arm64 crossbuild-essential-amd64 all 12.12 [3552 B] Get:51 http://mirror.einval.org/debian unstable/main arm64 libdebhelper-perl all 14.1 [77.1 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 libtool all 2.5.4-11 [539 kB] Get:53 http://mirror.einval.org/debian unstable/main arm64 dh-autoreconf all 22 [12.2 kB] Get:54 http://mirror.einval.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.15.1-1 [17.1 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.15.1-1 [6020 B] Get:57 http://mirror.einval.org/debian unstable/main arm64 libelf1t64 arm64 0.195-1 [57.5 kB] Get:58 http://mirror.einval.org/debian unstable/main arm64 dwz arm64 0.16-4 [99.2 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 libunistring5 arm64 1.4.2-1 [455 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 libxml2-16 arm64 2.15.3+dfsg-1 [593 kB] Get:61 http://mirror.einval.org/debian unstable/main arm64 gettext arm64 1.0-1 [2547 kB] Get:62 http://mirror.einval.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:63 http://mirror.einval.org/debian unstable/main arm64 po-debconf all 1.0.22 [216 kB] Get:64 http://mirror.einval.org/debian unstable/main arm64 debhelper all 14.1 [933 kB] Get:65 http://mirror.einval.org/debian unstable/main amd64 gcc-15-base amd64 15.3.0-1 [37.4 kB] Get:66 http://mirror.einval.org/debian unstable/main amd64 libasan8 amd64 16.1.0-2 [2889 kB] Get:67 http://mirror.einval.org/debian unstable/main amd64 libatomic1 amd64 16.1.0-2 [10.4 kB] Get:68 http://mirror.einval.org/debian unstable/main amd64 libgomp1 amd64 16.1.0-2 [151 kB] Get:69 http://mirror.einval.org/debian unstable/main amd64 libitm1 amd64 16.1.0-2 [26.9 kB] Get:70 http://mirror.einval.org/debian unstable/main amd64 liblsan0 amd64 16.1.0-2 [1281 kB] Get:71 http://mirror.einval.org/debian unstable/main amd64 libtsan2 amd64 16.1.0-2 [2573 kB] Get:72 http://mirror.einval.org/debian unstable/main amd64 libstdc++6 amd64 16.1.0-2 [822 kB] Get:73 http://mirror.einval.org/debian unstable/main amd64 libubsan1 amd64 16.1.0-2 [1136 kB] Get:74 http://mirror.einval.org/debian unstable/main amd64 libhwasan0 amd64 16.1.0-2 [1580 kB] Get:75 http://mirror.einval.org/debian unstable/main amd64 libquadmath0 amd64 16.1.0-2 [148 kB] Get:76 http://mirror.einval.org/debian unstable/main amd64 libgcc-15-dev amd64 15.3.0-1 [2718 kB] Get:77 http://mirror.einval.org/debian unstable/main amd64 libc6-dev amd64 2.42-17 [1991 kB] Get:78 http://mirror.einval.org/debian unstable/main amd64 libstdc++-15-dev amd64 15.3.0-1 [2784 kB] Get:79 http://mirror.einval.org/debian unstable/main amd64 libboost1.90-dev amd64 1.90.0-6 [11.3 MB] Get:80 http://mirror.einval.org/debian unstable/main amd64 libboost-atomic1.90.0 amd64 1.90.0-6 [227 kB] Get:81 http://mirror.einval.org/debian unstable/main amd64 libboost-atomic1.90-dev amd64 1.90.0-6 [228 kB] Get:82 http://mirror.einval.org/debian unstable/main amd64 libboost-chrono1.90.0 amd64 1.90.0-6 [232 kB] Get:83 http://mirror.einval.org/debian unstable/main amd64 libboost-chrono1.90-dev amd64 1.90.0-6 [237 kB] Get:84 http://mirror.einval.org/debian unstable/main amd64 libboost-container1.90.0 amd64 1.90.0-6 [252 kB] Get:85 http://mirror.einval.org/debian unstable/main amd64 libboost-container1.90-dev amd64 1.90.0-6 [257 kB] Get:86 http://mirror.einval.org/debian unstable/main amd64 libboost-date-time1.90.0 amd64 1.90.0-6 [222 kB] Get:87 http://mirror.einval.org/debian unstable/main amd64 libboost-serialization1.90.0 amd64 1.90.0-6 [326 kB] Get:88 http://mirror.einval.org/debian unstable/main amd64 libboost-serialization1.90-dev amd64 1.90.0-6 [364 kB] Get:89 http://mirror.einval.org/debian unstable/main amd64 libboost-date-time1.90-dev amd64 1.90.0-6 [231 kB] Get:90 http://mirror.einval.org/debian unstable/main amd64 libboost-exception1.90-dev amd64 1.90.0-6 [222 kB] Get:91 http://mirror.einval.org/debian unstable/main amd64 libboost-filesystem1.90.0 amd64 1.90.0-6 [276 kB] Get:92 http://mirror.einval.org/debian unstable/main amd64 libboost-filesystem1.90-dev amd64 1.90.0-6 [293 kB] Get:93 http://mirror.einval.org/debian unstable/main amd64 libboost-filesystem-dev amd64 1.90.0.2 [2896 B] Get:94 http://mirror.einval.org/debian unstable/main amd64 libboost-random1.90.0 amd64 1.90.0-6 [230 kB] Get:95 http://mirror.einval.org/debian unstable/main amd64 libboost-random1.90-dev amd64 1.90.0-6 [232 kB] Get:96 http://mirror.einval.org/debian unstable/main amd64 libboost-regex1.90.0 amd64 1.90.0-6 [327 kB] Get:97 http://mirror.einval.org/debian unstable/main amd64 libboost-regex1.90-dev amd64 1.90.0-6 [343 kB] Get:98 http://mirror.einval.org/debian unstable/main amd64 libbz2-1.0 amd64 1.0.8-6+b2 [39.9 kB] Get:99 http://mirror.einval.org/debian unstable/main amd64 liblzma5 amd64 5.8.3-1 [332 kB] Get:100 http://mirror.einval.org/debian unstable/main amd64 libzstd1 amd64 1.5.7+dfsg-3+b2 [305 kB] Get:101 http://mirror.einval.org/debian unstable/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.2-3 [90.9 kB] Get:102 http://mirror.einval.org/debian unstable/main amd64 libboost-iostreams1.90.0 amd64 1.90.0-6 [245 kB] Get:103 http://mirror.einval.org/debian unstable/main amd64 libboost-iostreams1.90-dev amd64 1.90.0-6 [253 kB] Get:104 http://mirror.einval.org/debian unstable/main amd64 libboost-iostreams-dev amd64 1.90.0.2 [2844 B] Get:105 http://mirror.einval.org/debian unstable/main amd64 libboost-regex-dev amd64 1.90.0.2 [3124 B] Get:106 http://mirror.einval.org/debian unstable/main amd64 libboost-thread1.90.0 amd64 1.90.0-6 [255 kB] Get:107 http://mirror.einval.org/debian unstable/main amd64 libboost-thread1.90-dev amd64 1.90.0-6 [263 kB] Get:108 http://mirror.einval.org/debian unstable/main amd64 libboost-thread-dev amd64 1.90.0.2 [2880 B] Get:109 http://mirror.einval.org/debian unstable/main amd64 libbz2-dev amd64 1.0.8-6+b2 [33.6 kB] Get:110 http://mirror.einval.org/debian unstable/main amd64 libexpat1-dev amd64 2.8.1-1 [172 kB] Get:111 http://mirror.einval.org/debian unstable/main amd64 libfl2 amd64 2.6.4-8.2+b5 [84.3 kB] Get:112 http://mirror.einval.org/debian unstable/main amd64 libfl-dev amd64 2.6.4-8.2+b5 [85.6 kB] Get:113 http://mirror.einval.org/debian unstable/main amd64 libtcmalloc-minimal4t64 amd64 2.18.1-1 [134 kB] Get:114 http://mirror.einval.org/debian unstable/main amd64 libunwind8 amd64 1.8.1-0.4 [54.0 kB] Get:115 http://mirror.einval.org/debian unstable/main amd64 libgoogle-perftools4t64 amd64 2.18.1-1 [187 kB] Get:116 http://mirror.einval.org/debian unstable/main amd64 liblzma-dev amd64 5.8.3-1 [369 kB] Get:117 http://mirror.einval.org/debian unstable/main amd64 libunwind-dev amd64 1.8.1-0.4 [481 kB] Get:118 http://mirror.einval.org/debian unstable/main amd64 libgoogle-perftools-dev amd64 2.18.1-1 [426 kB] Get:119 http://mirror.einval.org/debian unstable/main arm64 xxd arm64 2:9.2.0524-1 [63.9 kB] Get:120 http://mirror.einval.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.2-3 [918 kB] Preconfiguring packages ... Fetched 122 MB in 2s (61.0 MB/s) Selecting previously unselected package autoconf-archive. (Reading database ... 12134 files and directories currently installed.) Preparing to unpack .../0-autoconf-archive_20241016-3_all.deb ... Unpacking autoconf-archive (20241016-3) ... Selecting previously unselected package m4. Preparing to unpack .../1-m4_1.4.21-1_arm64.deb ... Unpacking m4 (1.4.21-1) ... Selecting previously unselected package flex. Preparing to unpack .../2-flex_2.6.4-8.2+b5_arm64.deb ... Unpacking flex (2.6.4-8.2+b5) ... Selecting previously unselected package gcc-16-base:amd64. Preparing to unpack .../3-gcc-16-base_16.1.0-2_amd64.deb ... Unpacking gcc-16-base:amd64 (16.1.0-2) ... Selecting previously unselected package libgcc-s1:amd64. Preparing to unpack .../4-libgcc-s1_16.1.0-2_amd64.deb ... Unpacking libgcc-s1:amd64 (16.1.0-2) ... Selecting previously unselected package libc-gconv-modules-extra:amd64. Preparing to unpack .../5-libc-gconv-modules-extra_2.42-17_amd64.deb ... Unpacking libc-gconv-modules-extra:amd64 (2.42-17) ... Selecting previously unselected package libc6:amd64. Preparing to unpack .../6-libc6_2.42-17_amd64.deb ... Unpacking libc6:amd64 (2.42-17) ... Setting up gcc-16-base:amd64 (16.1.0-2) ... Setting up libc-gconv-modules-extra:amd64 (2.42-17) ... Setting up libgcc-s1:amd64 (16.1.0-2) ... Setting up libc6:amd64 (2.42-17) ... Selecting previously unselected package libexpat1:amd64. (Reading database ... 13795 files and directories currently installed.) Preparing to unpack .../000-libexpat1_2.8.1-1_amd64.deb ... Unpacking libexpat1:amd64 (2.8.1-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.47-4_arm64.deb ... Unpacking libmagic-mgc (1:5.47-4) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../003-libmagic1t64_1%3a5.47-4_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.47-4) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.47-4_arm64.deb ... Unpacking file (1:5.47-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_1.0-1_arm64.deb ... Unpacking gettext-base (1.0-1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../006-libuchardet0_0.0.8-2+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-2+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../007-groff-base_1.24.1-1_arm64.deb ... Unpacking groff-base (1.24.1-1) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../008-bsdextrautils_2.42.2-1_arm64.deb ... Unpacking bsdextrautils (2.42.2-1) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../009-libpipeline1_1.5.8-3_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-3) ... Selecting previously unselected package man-db. Preparing to unpack .../010-man-db_2.13.1-1+b1_arm64.deb ... Unpacking man-db (2.13.1-1+b1) ... Selecting previously unselected package autoconf. Preparing to unpack .../011-autoconf_2.73-2_all.deb ... Unpacking autoconf (2.73-2) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../012-autotools-dev_20240727.1+nmu1_all.deb ... Unpacking autotools-dev (20240727.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../013-automake_1%3a1.18.1-4_all.deb ... Unpacking automake (1:1.18.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../014-autopoint_1.0-1_all.deb ... Unpacking autopoint (1.0-1) ... Selecting previously unselected package gcc-15-x86-64-linux-gnu-base:arm64. Preparing to unpack .../015-gcc-15-x86-64-linux-gnu-base_15.3.0-1cross1_arm64.deb ... Unpacking gcc-15-x86-64-linux-gnu-base:arm64 (15.3.0-1cross1) ... Selecting previously unselected package cpp-15-x86-64-linux-gnu. Preparing to unpack .../016-cpp-15-x86-64-linux-gnu_15.3.0-1cross1_arm64.deb ... Unpacking cpp-15-x86-64-linux-gnu (15.3.0-1cross1) ... Selecting previously unselected package cpp-x86-64-linux-gnu. Preparing to unpack .../017-cpp-x86-64-linux-gnu_4%3a15.2.0-5+b1_arm64.deb ... Unpacking cpp-x86-64-linux-gnu (4:15.2.0-5+b1) ... Selecting previously unselected package binutils-x86-64-linux-gnu. Preparing to unpack .../018-binutils-x86-64-linux-gnu_2.46.50.20260617-1_arm64.deb ... Unpacking binutils-x86-64-linux-gnu (2.46.50.20260617-1) ... Selecting previously unselected package gcc-15-cross-base. Preparing to unpack .../019-gcc-15-cross-base_15.3.0-1cross1_all.deb ... Unpacking gcc-15-cross-base (15.3.0-1cross1) ... Selecting previously unselected package gcc-16-cross-base. Preparing to unpack .../020-gcc-16-cross-base_16.1.0-2cross1_all.deb ... Unpacking gcc-16-cross-base (16.1.0-2cross1) ... Selecting previously unselected package libgcc-s1-amd64-cross. Preparing to unpack .../021-libgcc-s1-amd64-cross_16.1.0-2cross1_all.deb ... Unpacking libgcc-s1-amd64-cross (16.1.0-2cross1) ... Selecting previously unselected package libgomp1-amd64-cross. Preparing to unpack .../022-libgomp1-amd64-cross_16.1.0-2cross1_all.deb ... Unpacking libgomp1-amd64-cross (16.1.0-2cross1) ... Selecting previously unselected package libitm1-amd64-cross. Preparing to unpack .../023-libitm1-amd64-cross_16.1.0-2cross1_all.deb ... Unpacking libitm1-amd64-cross (16.1.0-2cross1) ... Selecting previously unselected package libatomic1-amd64-cross. Preparing to unpack .../024-libatomic1-amd64-cross_16.1.0-2cross1_all.deb ... Unpacking libatomic1-amd64-cross (16.1.0-2cross1) ... Selecting previously unselected package libasan8-amd64-cross. Preparing to unpack .../025-libasan8-amd64-cross_16.1.0-2cross1_all.deb ... Unpacking libasan8-amd64-cross (16.1.0-2cross1) ... Selecting previously unselected package liblsan0-amd64-cross. Preparing to unpack .../026-liblsan0-amd64-cross_16.1.0-2cross1_all.deb ... Unpacking liblsan0-amd64-cross (16.1.0-2cross1) ... Selecting previously unselected package libtsan2-amd64-cross. Preparing to unpack .../027-libtsan2-amd64-cross_16.1.0-2cross1_all.deb ... Unpacking libtsan2-amd64-cross (16.1.0-2cross1) ... Selecting previously unselected package libc6-amd64-cross. Preparing to unpack .../028-libc6-amd64-cross_2.42-12cross1_all.deb ... Unpacking libc6-amd64-cross (2.42-12cross1) ... Selecting previously unselected package libstdc++6-amd64-cross. Preparing to unpack .../029-libstdc++6-amd64-cross_16.1.0-2cross1_all.deb ... Unpacking libstdc++6-amd64-cross (16.1.0-2cross1) ... Selecting previously unselected package libubsan1-amd64-cross. Preparing to unpack .../030-libubsan1-amd64-cross_16.1.0-2cross1_all.deb ... Unpacking libubsan1-amd64-cross (16.1.0-2cross1) ... Selecting previously unselected package libhwasan0-amd64-cross. Preparing to unpack .../031-libhwasan0-amd64-cross_16.1.0-2cross1_all.deb ... Unpacking libhwasan0-amd64-cross (16.1.0-2cross1) ... Selecting previously unselected package libquadmath0-amd64-cross. Preparing to unpack .../032-libquadmath0-amd64-cross_16.1.0-2cross1_all.deb ... Unpacking libquadmath0-amd64-cross (16.1.0-2cross1) ... Selecting previously unselected package libgcc-15-dev-amd64-cross. Preparing to unpack .../033-libgcc-15-dev-amd64-cross_15.3.0-1cross1_all.deb ... Unpacking libgcc-15-dev-amd64-cross (15.3.0-1cross1) ... Selecting previously unselected package gcc-15-x86-64-linux-gnu. Preparing to unpack .../034-gcc-15-x86-64-linux-gnu_15.3.0-1cross1_arm64.deb ... Unpacking gcc-15-x86-64-linux-gnu (15.3.0-1cross1) ... Selecting previously unselected package gcc-x86-64-linux-gnu. Preparing to unpack .../035-gcc-x86-64-linux-gnu_4%3a15.2.0-5+b1_arm64.deb ... Unpacking gcc-x86-64-linux-gnu (4:15.2.0-5+b1) ... Selecting previously unselected package linux-libc-dev-amd64-cross. Preparing to unpack .../036-linux-libc-dev-amd64-cross_7.0.13-1_all.deb ... Unpacking linux-libc-dev-amd64-cross (7.0.13-1) ... Selecting previously unselected package libc6-dev-amd64-cross. Preparing to unpack .../037-libc6-dev-amd64-cross_2.42-12cross1_all.deb ... Unpacking libc6-dev-amd64-cross (2.42-12cross1) ... Selecting previously unselected package libstdc++-15-dev-amd64-cross. Preparing to unpack .../038-libstdc++-15-dev-amd64-cross_15.3.0-1cross1_all.deb ... Unpacking libstdc++-15-dev-amd64-cross (15.3.0-1cross1) ... Selecting previously unselected package g++-15-x86-64-linux-gnu. Preparing to unpack .../039-g++-15-x86-64-linux-gnu_15.3.0-1cross1_arm64.deb ... Unpacking g++-15-x86-64-linux-gnu (15.3.0-1cross1) ... Selecting previously unselected package g++-x86-64-linux-gnu. Preparing to unpack .../040-g++-x86-64-linux-gnu_4%3a15.2.0-5+b1_arm64.deb ... Unpacking g++-x86-64-linux-gnu (4:15.2.0-5+b1) ... Selecting previously unselected package crossbuild-essential-amd64. Preparing to unpack .../041-crossbuild-essential-amd64_12.12_all.deb ... Unpacking crossbuild-essential-amd64 (12.12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../042-libdebhelper-perl_14.1_all.deb ... Unpacking libdebhelper-perl (14.1) ... Selecting previously unselected package libtool. Preparing to unpack .../043-libtool_2.5.4-11_all.deb ... Unpacking libtool (2.5.4-11) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../044-dh-autoreconf_22_all.deb ... Unpacking dh-autoreconf (22) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../045-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../046-libfile-stripnondeterminism-perl_1.15.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.15.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../047-dh-strip-nondeterminism_1.15.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.15.1-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../048-libelf1t64_0.195-1_arm64.deb ... Unpacking libelf1t64:arm64 (0.195-1) ... Selecting previously unselected package dwz. Preparing to unpack .../049-dwz_0.16-4_arm64.deb ... Unpacking dwz (0.16-4) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../050-libunistring5_1.4.2-1_arm64.deb ... Unpacking libunistring5:arm64 (1.4.2-1) ... Selecting previously unselected package libxml2-16:arm64. Preparing to unpack .../051-libxml2-16_2.15.3+dfsg-1_arm64.deb ... Unpacking libxml2-16:arm64 (2.15.3+dfsg-1) ... Selecting previously unselected package gettext. Preparing to unpack .../052-gettext_1.0-1_arm64.deb ... Unpacking gettext (1.0-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../053-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../054-po-debconf_1.0.22_all.deb ... Unpacking po-debconf (1.0.22) ... Selecting previously unselected package debhelper. Preparing to unpack .../055-debhelper_14.1_all.deb ... Unpacking debhelper (14.1) ... Selecting previously unselected package gcc-15-base:amd64. Preparing to unpack .../056-gcc-15-base_15.3.0-1_amd64.deb ... Unpacking gcc-15-base:amd64 (15.3.0-1) ... Selecting previously unselected package libasan8:amd64. Preparing to unpack .../057-libasan8_16.1.0-2_amd64.deb ... Unpacking libasan8:amd64 (16.1.0-2) ... Selecting previously unselected package libatomic1:amd64. Preparing to unpack .../058-libatomic1_16.1.0-2_amd64.deb ... Unpacking libatomic1:amd64 (16.1.0-2) ... Selecting previously unselected package libgomp1:amd64. Preparing to unpack .../059-libgomp1_16.1.0-2_amd64.deb ... Unpacking libgomp1:amd64 (16.1.0-2) ... Selecting previously unselected package libitm1:amd64. Preparing to unpack .../060-libitm1_16.1.0-2_amd64.deb ... Unpacking libitm1:amd64 (16.1.0-2) ... Selecting previously unselected package liblsan0:amd64. Preparing to unpack .../061-liblsan0_16.1.0-2_amd64.deb ... Unpacking liblsan0:amd64 (16.1.0-2) ... Selecting previously unselected package libtsan2:amd64. Preparing to unpack .../062-libtsan2_16.1.0-2_amd64.deb ... Unpacking libtsan2:amd64 (16.1.0-2) ... Selecting previously unselected package libstdc++6:amd64. Preparing to unpack .../063-libstdc++6_16.1.0-2_amd64.deb ... Unpacking libstdc++6:amd64 (16.1.0-2) ... Selecting previously unselected package libubsan1:amd64. Preparing to unpack .../064-libubsan1_16.1.0-2_amd64.deb ... Unpacking libubsan1:amd64 (16.1.0-2) ... Selecting previously unselected package libhwasan0:amd64. Preparing to unpack .../065-libhwasan0_16.1.0-2_amd64.deb ... Unpacking libhwasan0:amd64 (16.1.0-2) ... Selecting previously unselected package libquadmath0:amd64. Preparing to unpack .../066-libquadmath0_16.1.0-2_amd64.deb ... Unpacking libquadmath0:amd64 (16.1.0-2) ... Selecting previously unselected package libgcc-15-dev:amd64. Preparing to unpack .../067-libgcc-15-dev_15.3.0-1_amd64.deb ... Unpacking libgcc-15-dev:amd64 (15.3.0-1) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../068-libc6-dev_2.42-17_amd64.deb ... Unpacking libc6-dev:amd64 (2.42-17) ... Selecting previously unselected package libstdc++-15-dev:amd64. Preparing to unpack .../069-libstdc++-15-dev_15.3.0-1_amd64.deb ... Unpacking libstdc++-15-dev:amd64 (15.3.0-1) ... Selecting previously unselected package libboost1.90-dev:amd64. Preparing to unpack .../070-libboost1.90-dev_1.90.0-6_amd64.deb ... Unpacking libboost1.90-dev:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-atomic1.90.0:amd64. Preparing to unpack .../071-libboost-atomic1.90.0_1.90.0-6_amd64.deb ... Unpacking libboost-atomic1.90.0:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-atomic1.90-dev:amd64. Preparing to unpack .../072-libboost-atomic1.90-dev_1.90.0-6_amd64.deb ... Unpacking libboost-atomic1.90-dev:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-chrono1.90.0:amd64. Preparing to unpack .../073-libboost-chrono1.90.0_1.90.0-6_amd64.deb ... Unpacking libboost-chrono1.90.0:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-chrono1.90-dev:amd64. Preparing to unpack .../074-libboost-chrono1.90-dev_1.90.0-6_amd64.deb ... Unpacking libboost-chrono1.90-dev:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-container1.90.0:amd64. Preparing to unpack .../075-libboost-container1.90.0_1.90.0-6_amd64.deb ... Unpacking libboost-container1.90.0:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-container1.90-dev:amd64. Preparing to unpack .../076-libboost-container1.90-dev_1.90.0-6_amd64.deb ... Unpacking libboost-container1.90-dev:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-date-time1.90.0:amd64. Preparing to unpack .../077-libboost-date-time1.90.0_1.90.0-6_amd64.deb ... Unpacking libboost-date-time1.90.0:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-serialization1.90.0:amd64. Preparing to unpack .../078-libboost-serialization1.90.0_1.90.0-6_amd64.deb ... Unpacking libboost-serialization1.90.0:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-serialization1.90-dev:amd64. Preparing to unpack .../079-libboost-serialization1.90-dev_1.90.0-6_amd64.deb ... Unpacking libboost-serialization1.90-dev:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-date-time1.90-dev:amd64. Preparing to unpack .../080-libboost-date-time1.90-dev_1.90.0-6_amd64.deb ... Unpacking libboost-date-time1.90-dev:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-exception1.90-dev:amd64. Preparing to unpack .../081-libboost-exception1.90-dev_1.90.0-6_amd64.deb ... Unpacking libboost-exception1.90-dev:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-filesystem1.90.0:amd64. Preparing to unpack .../082-libboost-filesystem1.90.0_1.90.0-6_amd64.deb ... Unpacking libboost-filesystem1.90.0:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-filesystem1.90-dev:amd64. Preparing to unpack .../083-libboost-filesystem1.90-dev_1.90.0-6_amd64.deb ... Unpacking libboost-filesystem1.90-dev:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-filesystem-dev:amd64. Preparing to unpack .../084-libboost-filesystem-dev_1.90.0.2_amd64.deb ... Unpacking libboost-filesystem-dev:amd64 (1.90.0.2) ... Selecting previously unselected package libboost-random1.90.0:amd64. Preparing to unpack .../085-libboost-random1.90.0_1.90.0-6_amd64.deb ... Unpacking libboost-random1.90.0:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-random1.90-dev:amd64. Preparing to unpack .../086-libboost-random1.90-dev_1.90.0-6_amd64.deb ... Unpacking libboost-random1.90-dev:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-regex1.90.0:amd64. Preparing to unpack .../087-libboost-regex1.90.0_1.90.0-6_amd64.deb ... Unpacking libboost-regex1.90.0:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-regex1.90-dev:amd64. Preparing to unpack .../088-libboost-regex1.90-dev_1.90.0-6_amd64.deb ... Unpacking libboost-regex1.90-dev:amd64 (1.90.0-6) ... Selecting previously unselected package libbz2-1.0:amd64. Preparing to unpack .../089-libbz2-1.0_1.0.8-6+b2_amd64.deb ... Unpacking libbz2-1.0:amd64 (1.0.8-6+b2) ... Selecting previously unselected package liblzma5:amd64. Preparing to unpack .../090-liblzma5_5.8.3-1_amd64.deb ... Unpacking liblzma5:amd64 (5.8.3-1) ... Selecting previously unselected package libzstd1:amd64. Preparing to unpack .../091-libzstd1_1.5.7+dfsg-3+b2_amd64.deb ... Unpacking libzstd1:amd64 (1.5.7+dfsg-3+b2) ... Selecting previously unselected package zlib1g:amd64. Preparing to unpack .../092-zlib1g_1%3a1.3.dfsg+really1.3.2-3_amd64.deb ... Unpacking zlib1g:amd64 (1:1.3.dfsg+really1.3.2-3) ... Selecting previously unselected package libboost-iostreams1.90.0:amd64. Preparing to unpack .../093-libboost-iostreams1.90.0_1.90.0-6_amd64.deb ... Unpacking libboost-iostreams1.90.0:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-iostreams1.90-dev:amd64. Preparing to unpack .../094-libboost-iostreams1.90-dev_1.90.0-6_amd64.deb ... Unpacking libboost-iostreams1.90-dev:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-iostreams-dev:amd64. Preparing to unpack .../095-libboost-iostreams-dev_1.90.0.2_amd64.deb ... Unpacking libboost-iostreams-dev:amd64 (1.90.0.2) ... Selecting previously unselected package libboost-regex-dev:amd64. Preparing to unpack .../096-libboost-regex-dev_1.90.0.2_amd64.deb ... Unpacking libboost-regex-dev:amd64 (1.90.0.2) ... Selecting previously unselected package libboost-thread1.90.0:amd64. Preparing to unpack .../097-libboost-thread1.90.0_1.90.0-6_amd64.deb ... Unpacking libboost-thread1.90.0:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-thread1.90-dev:amd64. Preparing to unpack .../098-libboost-thread1.90-dev_1.90.0-6_amd64.deb ... Unpacking libboost-thread1.90-dev:amd64 (1.90.0-6) ... Selecting previously unselected package libboost-thread-dev:amd64. Preparing to unpack .../099-libboost-thread-dev_1.90.0.2_amd64.deb ... Unpacking libboost-thread-dev:amd64 (1.90.0.2) ... Selecting previously unselected package libbz2-dev:amd64. Preparing to unpack .../100-libbz2-dev_1.0.8-6+b2_amd64.deb ... Unpacking libbz2-dev:amd64 (1.0.8-6+b2) ... Selecting previously unselected package libexpat1-dev:amd64. Preparing to unpack .../101-libexpat1-dev_2.8.1-1_amd64.deb ... Unpacking libexpat1-dev:amd64 (2.8.1-1) ... Selecting previously unselected package libfl2:amd64. Preparing to unpack .../102-libfl2_2.6.4-8.2+b5_amd64.deb ... Unpacking libfl2:amd64 (2.6.4-8.2+b5) ... Selecting previously unselected package libfl-dev:amd64. Preparing to unpack .../103-libfl-dev_2.6.4-8.2+b5_amd64.deb ... Unpacking libfl-dev:amd64 (2.6.4-8.2+b5) ... Selecting previously unselected package libtcmalloc-minimal4t64:amd64. Preparing to unpack .../104-libtcmalloc-minimal4t64_2.18.1-1_amd64.deb ... Unpacking libtcmalloc-minimal4t64:amd64 (2.18.1-1) ... Selecting previously unselected package libunwind8:amd64. Preparing to unpack .../105-libunwind8_1.8.1-0.4_amd64.deb ... Unpacking libunwind8:amd64 (1.8.1-0.4) ... Selecting previously unselected package libgoogle-perftools4t64:amd64. Preparing to unpack .../106-libgoogle-perftools4t64_2.18.1-1_amd64.deb ... Unpacking libgoogle-perftools4t64:amd64 (2.18.1-1) ... Selecting previously unselected package liblzma-dev:amd64. Preparing to unpack .../107-liblzma-dev_5.8.3-1_amd64.deb ... Unpacking liblzma-dev:amd64 (5.8.3-1) ... Selecting previously unselected package libunwind-dev:amd64. Preparing to unpack .../108-libunwind-dev_1.8.1-0.4_amd64.deb ... Unpacking libunwind-dev:amd64 (1.8.1-0.4) ... Selecting previously unselected package libgoogle-perftools-dev:amd64. Preparing to unpack .../109-libgoogle-perftools-dev_2.18.1-1_amd64.deb ... Unpacking libgoogle-perftools-dev:amd64 (2.18.1-1) ... Selecting previously unselected package xxd. Preparing to unpack .../110-xxd_2%3a9.2.0524-1_arm64.deb ... Unpacking xxd (2:9.2.0524-1) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../111-zlib1g-dev_1%3a1.3.dfsg+really1.3.2-3_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.2-3) ... Selecting previously unselected package sbuild-build-depends-main-dummy:amd64. Preparing to unpack .../112-sbuild-build-depends-main-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-main-dummy:amd64 (0.invalid.0) ... Setting up libexpat1:amd64 (2.8.1-1) ... Setting up libpipeline1:arm64 (1.5.8-3) ... Setting up libzstd1:amd64 (1.5.7+dfsg-3+b2) ... Setting up linux-libc-dev-amd64-cross (7.0.13-1) ... Setting up bsdextrautils (2.42.2-1) ... Setting up liblzma5:amd64 (5.8.3-1) ... Setting up libmagic-mgc (1:5.47-4) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:arm64 (2.15.3+dfsg-1) ... Setting up libdebhelper-perl (14.1) ... Setting up libboost-date-time1.90.0:amd64 (1.90.0-6) ... Setting up libmagic1t64:arm64 (1:5.47-4) ... Setting up gettext-base (1.0-1) ... Setting up m4 (1.4.21-1) ... Setting up gcc-15-x86-64-linux-gnu-base:arm64 (15.3.0-1cross1) ... Setting up zlib1g:amd64 (1:1.3.dfsg+really1.3.2-3) ... Setting up autoconf-archive (20241016-3) ... Setting up file (1:5.47-4) ... Setting up cpp-15-x86-64-linux-gnu (15.3.0-1cross1) ... Setting up libgomp1:amd64 (16.1.0-2) ... Setting up libunwind8:amd64 (1.8.1-0.4) ... Setting up gcc-16-cross-base (16.1.0-2cross1) ... Setting up xxd (2:9.2.0524-1) ... Setting up libelf1t64:arm64 (0.195-1) ... Setting up libitm1-amd64-cross (16.1.0-2cross1) ... Setting up autotools-dev (20240727.1+nmu1) ... Setting up libatomic1-amd64-cross (16.1.0-2cross1) ... Setting up libquadmath0:amd64 (16.1.0-2) ... Setting up libunistring5:arm64 (1.4.2-1) ... Setting up libquadmath0-amd64-cross (16.1.0-2cross1) ... Setting up libatomic1:amd64 (16.1.0-2) ... Setting up autopoint (1.0-1) ... Setting up libc6-amd64-cross (2.42-12cross1) ... Setting up libfl2:amd64 (2.6.4-8.2+b5) ... Setting up autoconf (2.73-2) ... Setting up liblzma-dev:amd64 (5.8.3-1) ... Setting up dwz (0.16-4) ... Setting up sensible-utils (0.0.26) ... Setting up libhwasan0:amd64 (16.1.0-2) ... Setting up libasan8:amd64 (16.1.0-2) ... Setting up libuchardet0:arm64 (0.0.8-2+b2) ... Setting up libc6-dev:amd64 (2.42-17) ... Setting up libtsan2:amd64 (16.1.0-2) ... Setting up gcc-15-cross-base (15.3.0-1cross1) ... Setting up libbz2-1.0:amd64 (1.0.8-6+b2) ... Setting up libgcc-s1-amd64-cross (16.1.0-2cross1) ... Setting up gcc-15-base:amd64 (15.3.0-1) ... Setting up libstdc++6:amd64 (16.1.0-2) ... Setting up liblsan0:amd64 (16.1.0-2) ... Setting up libitm1:amd64 (16.1.0-2) ... Setting up binutils-x86-64-linux-gnu (2.46.50.20260617-1) ... Setting up libbz2-dev:amd64 (1.0.8-6+b2) ... Setting up libstdc++6-amd64-cross (16.1.0-2cross1) ... Setting up cpp-x86-64-linux-gnu (4:15.2.0-5+b1) ... Setting up libboost-chrono1.90.0:amd64 (1.90.0-6) ... Setting up automake (1:1.18.1-4) ... update-alternatives: using /usr/bin/automake-1.18 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.1-1) ... Setting up flex (2.6.4-8.2+b5) ... Setting up gettext (1.0-1) ... Setting up libunwind-dev:amd64 (1.8.1-0.4) ... Setting up libtool (2.5.4-11) ... Setting up libasan8-amd64-cross (16.1.0-2cross1) ... Setting up liblsan0-amd64-cross (16.1.0-2cross1) ... Setting up libc6-dev-amd64-cross (2.42-12cross1) ... Setting up libtsan2-amd64-cross (16.1.0-2cross1) ... Setting up libboost-thread1.90.0:amd64 (1.90.0-6) ... Setting up libgomp1-amd64-cross (16.1.0-2cross1) ... Setting up libfl-dev:amd64 (2.6.4-8.2+b5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (22) ... Setting up libexpat1-dev:amd64 (2.8.1-1) ... Setting up libhwasan0-amd64-cross (16.1.0-2cross1) ... Setting up libubsan1-amd64-cross (16.1.0-2cross1) ... Setting up libtcmalloc-minimal4t64:amd64 (2.18.1-1) ... Setting up libubsan1:amd64 (16.1.0-2) ... Setting up dh-strip-nondeterminism (1.15.1-1) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.2-3) ... Setting up groff-base (1.24.1-1) ... Setting up libboost-atomic1.90.0:amd64 (1.90.0-6) ... Setting up libboost-serialization1.90.0:amd64 (1.90.0-6) ... Setting up libboost-regex1.90.0:amd64 (1.90.0-6) ... Setting up libboost-filesystem1.90.0:amd64 (1.90.0-6) ... Setting up libboost-random1.90.0:amd64 (1.90.0-6) ... Setting up libboost-container1.90.0:amd64 (1.90.0-6) ... Setting up libboost-iostreams1.90.0:amd64 (1.90.0-6) ... Setting up libgcc-15-dev:amd64 (15.3.0-1) ... Setting up libgoogle-perftools4t64:amd64 (2.18.1-1) ... Setting up po-debconf (1.0.22) ... Setting up libgoogle-perftools-dev:amd64 (2.18.1-1) ... Setting up man-db (2.13.1-1+b1) ... Not building database; man-db/auto-update is not 'true'. Setting up libstdc++-15-dev:amd64 (15.3.0-1) ... Setting up libgcc-15-dev-amd64-cross (15.3.0-1cross1) ... Setting up libboost1.90-dev:amd64 (1.90.0-6) ... Setting up libboost-atomic1.90-dev:amd64 (1.90.0-6) ... Setting up libboost-random1.90-dev:amd64 (1.90.0-6) ... Setting up libstdc++-15-dev-amd64-cross (15.3.0-1cross1) ... Setting up libboost-chrono1.90-dev:amd64 (1.90.0-6) ... Setting up libboost-serialization1.90-dev:amd64 (1.90.0-6) ... Setting up libboost-filesystem1.90-dev:amd64 (1.90.0-6) ... Setting up debhelper (14.1) ... Setting up gcc-15-x86-64-linux-gnu (15.3.0-1cross1) ... Setting up libboost-container1.90-dev:amd64 (1.90.0-6) ... Setting up libboost-exception1.90-dev:amd64 (1.90.0-6) ... Setting up libboost-regex1.90-dev:amd64 (1.90.0-6) ... Setting up libboost-regex-dev:amd64 (1.90.0.2) ... Setting up libboost-filesystem-dev:amd64 (1.90.0.2) ... Setting up libboost-date-time1.90-dev:amd64 (1.90.0-6) ... Setting up g++-15-x86-64-linux-gnu (15.3.0-1cross1) ... Setting up gcc-x86-64-linux-gnu (4:15.2.0-5+b1) ... Setting up libboost-iostreams1.90-dev:amd64 (1.90.0-6) ... Setting up libboost-iostreams-dev:amd64 (1.90.0.2) ... Setting up libboost-thread1.90-dev:amd64 (1.90.0-6) ... Setting up g++-x86-64-linux-gnu (4:15.2.0-5+b1) ... Setting up libboost-thread-dev:amd64 (1.90.0.2) ... Setting up crossbuild-essential-amd64 (12.12) ... Setting up sbuild-build-depends-main-dummy:amd64 (0.invalid.0) ... Processing triggers for libc-bin (2.42-17) ... Processing triggers for base-files (14.2) ... +------------------------------------------------------------------------------+ | Check architectures Sat, 20 Jun 2026 17:26:54 +0000 | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Build environment Sat, 20 Jun 2026 17:26:55 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.86+deb13-arm64 #1 SMP Debian 6.12.86-1 (2026-05-08) arm64 (aarch64) Toolchain package versions: binutils_2.46.50.20260617-1 dpkg-dev_1.23.7 g++-15_15.3.0-1 gcc-15_15.3.0-1 libc6-dev_2.42-17 libstdc++-15-dev_15.3.0-1 libstdc++-15-dev-amd64-cross_15.3.0-1cross1 libstdc++6_16.1.0-2 libstdc++6-amd64-cross_16.1.0-2cross1 linux-libc-dev_7.0.13-1 Package versions: apt_3.3.1 apt-utils_3.3.1 autoconf_2.73-2 autoconf-archive_20241016-3 automake_1:1.18.1-4 autopoint_1.0-1 autotools-dev_20240727.1+nmu1 base-files_14.2 base-passwd_3.6.8+b1 bash_5.3-3 binutils_2.46.50.20260617-1 binutils-aarch64-linux-gnu_2.46.50.20260617-1 binutils-common_2.46.50.20260617-1 binutils-x86-64-linux-gnu_2.46.50.20260617-1 bsdextrautils_2.42.2-1 build-essential_12.12 bzip2_1.0.8-6+b2 coreutils_9.10-1 cpp_4:15.2.0-5+b1 cpp-15_15.3.0-1 cpp-15-aarch64-linux-gnu_15.3.0-1 cpp-15-x86-64-linux-gnu_15.3.0-1cross1 cpp-aarch64-linux-gnu_4:15.2.0-5+b1 cpp-x86-64-linux-gnu_4:15.2.0-5+b1 crossbuild-essential-amd64_12.12 dash_0.5.12-12+b1 debconf_1.5.92 debhelper_14.1 debian-archive-keyring_2025.1 debianutils_5.23.2+b1 dh-autoreconf_22 dh-strip-nondeterminism_1.15.1-1 diffutils_1:3.12-1+b1 dpkg_1.23.7 dpkg-dev_1.23.7 dwz_0.16-4 file_1:5.47-4 findutils_4.10.0-4 flex_2.6.4-8.2+b5 g++_4:15.2.0-5+b1 g++-15_15.3.0-1 g++-15-aarch64-linux-gnu_15.3.0-1 g++-15-x86-64-linux-gnu_15.3.0-1cross1 g++-aarch64-linux-gnu_4:15.2.0-5+b1 g++-x86-64-linux-gnu_4:15.2.0-5+b1 gcc_4:15.2.0-5+b1 gcc-15_15.3.0-1 gcc-15-aarch64-linux-gnu_15.3.0-1 gcc-15-base_15.3.0-1 gcc-15-cross-base_15.3.0-1cross1 gcc-15-x86-64-linux-gnu_15.3.0-1cross1 gcc-15-x86-64-linux-gnu-base_15.3.0-1cross1 gcc-16-base_16.1.0-2 gcc-16-cross-base_16.1.0-2cross1 gcc-aarch64-linux-gnu_4:15.2.0-5+b1 gcc-x86-64-linux-gnu_4:15.2.0-5+b1 gettext_1.0-1 gettext-base_1.0-1 grep_3.12-1+b1 groff-base_1.24.1-1 gzip_1.13-1+b1 hostname_3.25+b1 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-3 libapt-pkg7.0_3.3.1 libarchive-zip-perl_1.68-1 libasan8_16.1.0-2 libasan8-amd64-cross_16.1.0-2cross1 libatomic1_16.1.0-2 libatomic1-amd64-cross_16.1.0-2cross1 libattr1_1:2.5.2-4 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1+b1 libbinutils_2.46.50.20260617-1 libblkid1_2.42.2-1 libboost-atomic1.90-dev_1.90.0-6 libboost-atomic1.90.0_1.90.0-6 libboost-chrono1.90-dev_1.90.0-6 libboost-chrono1.90.0_1.90.0-6 libboost-container1.90-dev_1.90.0-6 libboost-container1.90.0_1.90.0-6 libboost-date-time1.90-dev_1.90.0-6 libboost-date-time1.90.0_1.90.0-6 libboost-exception1.90-dev_1.90.0-6 libboost-filesystem-dev_1.90.0.2 libboost-filesystem1.90-dev_1.90.0-6 libboost-filesystem1.90.0_1.90.0-6 libboost-iostreams-dev_1.90.0.2 libboost-iostreams1.90-dev_1.90.0-6 libboost-iostreams1.90.0_1.90.0-6 libboost-random1.90-dev_1.90.0-6 libboost-random1.90.0_1.90.0-6 libboost-regex-dev_1.90.0.2 libboost-regex1.90-dev_1.90.0-6 libboost-regex1.90.0_1.90.0-6 libboost-serialization1.90-dev_1.90.0-6 libboost-serialization1.90.0_1.90.0-6 libboost-thread-dev_1.90.0.2 libboost-thread1.90-dev_1.90.0-6 libboost-thread1.90.0_1.90.0-6 libboost1.90-dev_1.90.0-6 libbz2-1.0_1.0.8-6+b2 libbz2-dev_1.0.8-6+b2 libc-bin_2.42-17 libc-dev-bin_2.42-17 libc-gconv-modules-extra_2.42-17 libc6_2.42-17 libc6-amd64-cross_2.42-12cross1 libc6-dev_2.42-17 libc6-dev-amd64-cross_2.42-12cross1 libcap-ng0_0.9.3-1 libcc1-0_16.1.0-2 libcrypt1_1:4.5.1-1+b1 libctf-nobfd0_2.46.50.20260617-1 libctf0_2.46.50.20260617-1 libdb5.3t64_5.3.28+dfsg2-11+b1 libdebconfclient0_0.283 libdebhelper-perl_14.1 libdpkg-perl_1.23.7 libelf1t64_0.195-1 libexpat1_2.8.1-1 libexpat1-dev_2.8.1-1 libfile-stripnondeterminism-perl_1.15.1-1 libfl-dev_2.6.4-8.2+b5 libfl2_2.6.4-8.2+b5 libgcc-15-dev_15.3.0-1 libgcc-15-dev-amd64-cross_15.3.0-1cross1 libgcc-s1_16.1.0-2 libgcc-s1-amd64-cross_16.1.0-2cross1 libgdbm-compat4t64_1.26-1+b2 libgdbm6t64_1.26-1+b2 libgmp10_2:6.3.0+dfsg-5+b2 libgomp1_16.1.0-2 libgomp1-amd64-cross_16.1.0-2cross1 libgoogle-perftools-dev_2.18.1-1 libgoogle-perftools4t64_2.18.1-1 libgprofng0_2.46.50.20260617-1 libhogweed6t64_3.10.2-1+b1 libhwasan0_16.1.0-2 libhwasan0-amd64-cross_16.1.0-2cross1 libisl23_0.27-2 libitm1_16.1.0-2 libitm1-amd64-cross_16.1.0-2cross1 libjansson4_2.14-2+b4 liblsan0_16.1.0-2 liblsan0-amd64-cross_16.1.0-2cross1 liblz4-1_1.10.0-10 liblzma-dev_5.8.3-1 liblzma5_5.8.3-1 libmagic-mgc_1:5.47-4 libmagic1t64_1:5.47-4 libmd0_1.2.0-2 libmount1_2.42.2-1 libmpc3_1.3.1-3 libmpfr6_4.2.2-3 libnettle8t64_3.10.2-1+b1 libpam-modules_1.7.0-6 libpam-modules-bin_1.7.0-6 libpam-runtime_1.7.0-6 libpam0g_1.7.0-6 libpcre2-8-0_10.46-1+b2 libperl5.40_5.40.1-8 libpipeline1_1.5.8-3 libquadmath0_16.1.0-2 libquadmath0-amd64-cross_16.1.0-2cross1 libseccomp2_2.6.0-2+b1 libselinux1_3.10-1 libsframe3_2.46.50.20260617-1 libsmartcols1_2.42.2-1 libssl3t64_3.6.3-1 libstdc++-15-dev_15.3.0-1 libstdc++-15-dev-amd64-cross_15.3.0-1cross1 libstdc++6_16.1.0-2 libstdc++6-amd64-cross_16.1.0-2cross1 libsystemd0_261-1 libtcmalloc-minimal4t64_2.18.1-1 libtinfo6_6.6+20251231-1+b1 libtool_2.5.4-11 libtsan2_16.1.0-2 libtsan2-amd64-cross_16.1.0-2cross1 libubsan1_16.1.0-2 libubsan1-amd64-cross_16.1.0-2cross1 libuchardet0_0.0.8-2+b2 libudev1_261-1 libunistring5_1.4.2-1 libunwind-dev_1.8.1-0.4 libunwind8_1.8.1-0.4 libuuid1_2.42.2-1 libxml2-16_2.15.3+dfsg-1 libxxhash0_0.8.3-2+b2 libzstd1_1.5.7+dfsg-3+b2 linux-libc-dev_7.0.13-1 linux-libc-dev-amd64-cross_7.0.13-1 login_1:4.16.0-2+really2.42.2-1 login.defs_1:4.19.3-2 m4_1.4.21-1 make_4.4.1-3+b1 man-db_2.13.1-1+b1 mawk_1.3.4.20260302-1 ncurses-base_6.6+20251231-1 ncurses-bin_6.6+20251231-1+b1 openssl-provider-legacy_3.6.3-1 patch_2.8-2+b1 perl_5.40.1-8 perl-base_5.40.1-8 perl-modules-5.40_5.40.1-8 po-debconf_1.0.22 rpcsvc-proto_1.4.4-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-3 sensible-utils_0.0.26 sqv_1.3.0-5+b2 sysvinit-utils_3.18-1 tar_1.35+dfsg-4 util-linux_2.42.2-1 xxd_2:9.2.0524-1 xz-utils_5.8.3-1 zlib1g_1:1.3.dfsg+really1.3.2-3 zlib1g-dev_1:1.3.dfsg+really1.3.2-3 +------------------------------------------------------------------------------+ | Build Sat, 20 Jun 2026 17:26:55 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: mira Binary: mira-assembler, mira-rfam-12s-rrna, mira-doc Architecture: any all Version: 4.9.6-12 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Andreas Tille , Michael R. Crusoe Homepage: https://sourceforge.net/p/mira-assembler/wiki/Home/ Standards-Version: 4.7.3 Vcs-Browser: https://salsa.debian.org/med-team/mira Vcs-Git: https://salsa.debian.org/med-team/mira.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), autoconf-archive, libbz2-dev, libexpat1-dev, libgoogle-perftools-dev [i386 amd64], flex, libfl-dev, xxd, zlib1g-dev, libboost-thread-dev, libboost-regex-dev, libboost-filesystem-dev, libboost-iostreams-dev Build-Depends-Indep: docbook-xsl, dblatex Package-List: mira-assembler deb science optional arch=any mira-doc deb doc optional arch=all mira-rfam-12s-rrna deb science optional arch=all Checksums-Sha1: d8c2b4322a7b51409055c5e48ab30dc3c8a45fb0 15006355 mira_4.9.6.orig.tar.bz2 a61566f164f1045fcf0bec990cc081cac1b55893 34704 mira_4.9.6-12.debian.tar.xz Checksums-Sha256: e910479bc5f3f205913ac81cd2a24449cc175a6d1ae1fe3ae33ea0e100435b16 15006355 mira_4.9.6.orig.tar.bz2 ee481e312fdca4e65e8940e04392fe9563d43eb08b02395c7fea4cdf91d2721a 34704 mira_4.9.6-12.debian.tar.xz Files: b0391f9900156aece2dd9bc2ad863e1e 15006355 mira_4.9.6.orig.tar.bz2 527bdf95c28bf0da937b1b0463d01bf0 34704 mira_4.9.6-12.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJCBAEBCgAsFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmmR2BIOHHRpbGxlYUBy a2kuZGUACgkQV4oElNHGRtHVLQ//aQ2tSmFSBttOWZveknqjk343NYdtgzixan8f lzUG48UcNYPh5c6o/BS49aEOAB9hbJRVDIoy8wuex9QWqwM1YvBgQKYs1151ulEv wgCGcml+RrL1FLY9eQrieTfaqW2wfIRDSNyPHRi1KMisMJqAvZLPyJqkGpD6Plo1 08GLN2Mgf2xA3JErd5QAVgtj0Hq3H1OrZtRCxaNwIgYbapDbhDs8q1JMLovw92Jj MJzNxg4auRL3JepcUgNetfnQAgHPONqihmT/BXKUA5nuVdO0qoRkA+njdRcjkpYD Onz63LcBz1FjuhiQS9R94ICveLu4jcvLihuoL1YP+KlVWtt8zGuZV2Rq3A6w6zZE +S5bvIlx2mb79ZkSMzbnBxxS3F6kw/b1JRx4DZ8EExkq2cgqkYsvRulvIuz04u07 hEMXYq9ubawYXcG5Ozgg6aHz5E3FLavYourB3savYmXRdoDYkLRyPfSmDdH5VXQi McMj1ZSh1RJBP0BeaZCMrLg5d3R7bfoECbTcBVyEVp4ZaujeEX8PuFv1YbEnAVS0 b6UFQXE/+YtGTT9oOceSb8aoO29PcJKXrG72QuOTgquGejn1vYpvn2yZNhx+qWOU 78jRqxWhZswDM9CABeFiUk8x4GRcKgjEcq7UliZXr/nLWnM1diov8nf1VfUSoY4v Irzu1j0= =iuPZ -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./mira_4.9.6-12.dsc: missing OpenPGP keyrings dpkg-source: info: verifying ./mira_4.9.6-12.dsc dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-keyring.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-tag2upload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-nonupload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting mira in /build/reproducible-path/mira-4.9.6 dpkg-source: info: unpacking mira_4.9.6.orig.tar.bz2 dpkg-source: info: unpacking mira_4.9.6-12.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying spelling.patch dpkg-source: info: applying sls-rrna-fix dpkg-source: info: applying man-directory dpkg-source: info: applying fix_buildorder.patch dpkg-source: info: applying gcc-12.patch dpkg-source: info: applying gcc-13.patch dpkg-source: info: applying fix-debian-compileinfo.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.amd64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_GB.UTF-8 LC_ALL=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aamd64 -Pcross,nocheck -us -uc -B --jobs-try=1 dpkg-buildpackage: info: source package mira dpkg-buildpackage: info: source version 4.9.6-12 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type x86_64-linux-gnu does not match CC system type aarch64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/mira-4.9.6' if [ -f .version.bak ] ; then mv .version.bak .version; fi ( cd doc ; make clean ) || true make[2]: Entering directory '/build/reproducible-path/mira-4.9.6/doc' cd .. && make am--refresh make[3]: Entering directory '/build/reproducible-path/mira-4.9.6' make[3]: *** No rule to make target 'am--refresh'. Stop. make[3]: Leaving directory '/build/reproducible-path/mira-4.9.6' make[2]: *** [Makefile:263: ../config.status] Error 2 make[2]: Leaving directory '/build/reproducible-path/mira-4.9.6/doc' dh_auto_clean || true find * -name Makefile -exec rm '{}' ';' find * -name '*.xxd.H' -exec rm '{}' ';' find * -name '*.par.H' -exec rm '{}' ';' find * -name 'compileinfo.*' -exec rm '{}' ';' make[1]: Leaving directory '/build/reproducible-path/mira-4.9.6' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/mira-assembler.substvars debian/mira-rfam-12s-rrna.substvars debian/mira-doc.substvars debian/files rm -fr -- debian/mira-assembler/ debian/tmp/ debian/mira-rfam-12s-rrna/ debian/mira-doc/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch dh_update_autotools_config -a cp -a --update=none --reflink=auto config.guess debian/.debhelper/bucket/files/9be3de218833c076786b919dc34aab691611f4cd73316e7705f2673e2c41921b.tmp mv debian/.debhelper/bucket/files/9be3de218833c076786b919dc34aab691611f4cd73316e7705f2673e2c41921b.tmp debian/.debhelper/bucket/files/9be3de218833c076786b919dc34aab691611f4cd73316e7705f2673e2c41921b cp -f /usr/share/misc/config.guess ./config.guess cp -a --update=none --reflink=auto config.sub debian/.debhelper/bucket/files/e308ae7f7f524bd790f8d4457c7c0a30f8403ffff4dd0b7d4388daca24275db4.tmp mv debian/.debhelper/bucket/files/e308ae7f7f524bd790f8d4457c7c0a30f8403ffff4dd0b7d4388daca24275db4.tmp debian/.debhelper/bucket/files/e308ae7f7f524bd790f8d4457c7c0a30f8403ffff4dd0b7d4388daca24275db4 cp -f /usr/share/misc/config.sub ./config.sub dh_autoreconf -a find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.before grep -q ^XDT_ configure.ac autoreconf -f -i -v autoreconf: export WARNINGS= autoreconf: Entering directory '.' autoreconf: configure.ac: no obvious need to run autopoint autoreconf: running: aclocal --force -I m4 autoreconf: configure.ac: tracing autoreconf: running: libtoolize --copy --force libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' autoreconf: configure.ac: not using Intltool autoreconf: configure.ac: not using Gtkdoc autoreconf: configure.ac: no need to run autopoint (confirmed) autoreconf: running: aclocal --force -I m4 autoreconf: running: /usr/bin/autoconf --force configure.ac:38: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:38: You should run autoupdate. ./lib/autoconf/general.m4:205: AC_HELP_STRING is expanded from... configure.ac:38: the top level configure.ac:46: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:46: You should run autoupdate. ./lib/autoconf/general.m4:205: AC_HELP_STRING is expanded from... configure.ac:46: the top level configure.ac:190: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:190: You should run autoupdate. ./lib/autoconf/general.m4:205: AC_HELP_STRING is expanded from... configure.ac:190: the top level configure.ac:328: warning: The macro 'AC_TRY_COMPILE' is obsolete. configure.ac:328: You should run autoupdate. ./lib/autoconf/general.m4:2903: AC_TRY_COMPILE is expanded from... configure.ac:328: the top level configure.ac:419: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:419: You should run autoupdate. ./lib/autoconf/general.m4:205: AC_HELP_STRING is expanded from... configure.ac:419: the top level configure.ac:423: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:423: You should run autoupdate. ./lib/autoconf/general.m4:205: AC_HELP_STRING is expanded from... configure.ac:423: the top level configure.ac:663: warning: AC_PROG_LEX without either yywrap or noyywrap is obsolete ./lib/autoconf/programs.m4:744: _AC_PROG_LEX is expanded from... ./lib/autoconf/programs.m4:737: AC_PROG_LEX is expanded from... configure.ac:663: the top level configure.ac:670: warning: The macro 'AC_HEADER_STDC' is obsolete. configure.ac:670: You should run autoupdate. ./lib/autoconf/headers.m4:664: AC_HEADER_STDC is expanded from... configure.ac:670: the top level configure.ac:715: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:715: You should run autoupdate. ./lib/autoconf/general.m4:2976: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:689: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:696: AS_IF is expanded from... ./lib/autoconf/general.m4:2305: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2326: AC_CACHE_CHECK is expanded from... configure.ac:702: SUDO_FUNC_ISBLANK is expanded from... configure.ac:715: the top level configure.ac:1033: warning: The macro 'AC_LANG_C' is obsolete. configure.ac:1033: You should run autoupdate. ./lib/autoconf/c.m4:73: AC_LANG_C is expanded from... m4/ax_check_zlib.m4:63: AX_CHECK_ZLIB is expanded from... configure.ac:1033: the top level configure.ac:1045: warning: The macro 'AC_LANG_C' is obsolete. configure.ac:1045: You should run autoupdate. ./lib/autoconf/c.m4:73: AC_LANG_C is expanded from... configure.ac:1045: the top level configure.ac:1134: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:1134: You should run autoupdate. ./lib/autoconf/general.m4:205: AC_HELP_STRING is expanded from... configure.ac:1134: the top level configure.ac:1143: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:1143: You should run autoupdate. ./lib/autoconf/general.m4:205: AC_HELP_STRING is expanded from... configure.ac:1143: the top level configure.ac:1154: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:1154: You should run autoupdate. ./lib/autoconf/general.m4:205: AC_HELP_STRING is expanded from... configure.ac:1154: the top level configure.ac:1197: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:1197: You should run autoupdate. ./lib/autoconf/general.m4:205: AC_HELP_STRING is expanded from... configure.ac:1197: the top level configure.ac:1248: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:1248: You should run autoupdate. ./lib/autoconf/general.m4:205: AC_HELP_STRING is expanded from... configure.ac:1248: the top level configure.ac:1347: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:1347: You should run autoupdate. ./lib/autoconf/general.m4:205: AC_HELP_STRING is expanded from... configure.ac:1347: the top level configure.ac:1366: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:1366: You should run autoupdate. ./lib/autoconf/general.m4:205: AC_HELP_STRING is expanded from... configure.ac:1366: the top level configure.ac:1383: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:1383: You should run autoupdate. ./lib/autoconf/general.m4:205: AC_HELP_STRING is expanded from... configure.ac:1383: the top level configure.ac:1401: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:1401: You should run autoupdate. ./lib/autoconf/general.m4:205: AC_HELP_STRING is expanded from... configure.ac:1401: the top level configure.ac:1417: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:1417: You should run autoupdate. ./lib/autoconf/general.m4:205: AC_HELP_STRING is expanded from... configure.ac:1417: the top level configure.ac:1428: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:1428: You should run autoupdate. ./lib/autoconf/general.m4:205: AC_HELP_STRING is expanded from... configure.ac:1428: the top level configure.ac:1466: warning: AC_OUTPUT should be used without arguments. configure.ac:1466: You should run autoupdate. autoreconf: configure.ac: not running autoheader: no config headers autoreconf: running: automake --add-missing --copy --force-missing configure.ac:103: installing './compile' configure.ac:9: installing './missing' doc/docbook/Makefile.am:22: warning: '%'-style pattern rules are a GNU make extension src/caf/Makefile.am: installing './depcomp' src/io/Makefile.am:12: warning: '%'-style pattern rules are a GNU make extension src/mira/Makefile.am:10: warning: '%'-style pattern rules are a GNU make extension autoreconf: configure.ac: not running make: --make not given autoreconf: Leaving directory '.' find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.after debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/mira-4.9.6' cp -a .version .version.bak dh_auto_configure -- --with-boost-libdir=/usr/lib/x86_64-linux-gnu --with-boost=/usr ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --with-boost-libdir=/usr/lib/x86_64-linux-gnu --with-boost=/usr checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking whether UID '999' is supported by ustar format... yes checking whether GID '999' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking for a sed that does not truncate output... /usr/bin/sed checking whether to add --prefix as include path... yes +++++++++++++++++++++++++++++++++++++ systemuname: Linux CFLAGS now: -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include CXXFLAGS now: -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include LDFLAGS now: -Wl,-z,relro -Wl,-z,now -L/usr/lib +++++++++++++++++++++++++++++++++++++ checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to enable C23 features... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of x86_64-linux-gnu-gcc... none checking whether the compiler supports GNU C++... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking dependency style of x86_64-linux-gnu-g++... none checking for OpenMP flag of C compiler... -fopenmp Rescuing C++ flags for OpenMP +++++++++++++++++++++++++++++++++++++ OpenMP CFLAGS: -fopenmp OpenMP CXXFLAGS: -fopenmp +++++++++++++++++++++++++++++++++++++ +++++++++++++++++++++++++++++++++++++ systemuname: Linux CFLAGS now: -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include CXXFLAGS now: -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include LDFLAGS now: -Wl,-z,relro -Wl,-z,now -L/usr/lib +++++++++++++++++++++++++++++++++++++ checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for int64_t... yes +++++++++++++++++++++++++++++++++++++ CFLAGS now: -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include CXXFLAGS now: -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include LDFLAGS now: -Wl,-z,relro -Wl,-z,now -L/usr/lib +++++++++++++++++++++++++++++++++++++ checking whether long has 64bit... yes checking whether enabling 64bit compilation support... yes checking build system type... aarch64-unknown-linux-gnu checking for compiler optimisation settings... -O3 -funroll-loops +++++++++++++++++++++++++++++++++++++ CFLAGS now: -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops CXXFLAGS now: -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops LDFLAGS now: -Wl,-z,relro -Wl,-z,now -L/usr/lib +++++++++++++++++++++++++++++++++++++ checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/x86_64-linux-gnu/bin/ld checking if the linker (/usr/x86_64-linux-gnu/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert aarch64-unknown-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert aarch64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/x86_64-linux-gnu/bin/ld option to reload object files... -r checking for file... file checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... (cached) x86_64-linux-gnu-strip checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/x86_64-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/x86_64-linux-gnu/bin/ld -m elf_x86_64 checking if the linker (/usr/x86_64-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/x86_64-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-g++ linker (/usr/x86_64-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether make sets $(MAKE)... (cached) yes checking whether ln -s works... yes checking for flex... yes checking for flex... flex checking for lex output file root... lex.yy checking for lex library... none needed checking for library containing yywrap... -ll checking whether yytext is a pointer... yes checking for flex++... yes checking for xxd... yes checking for egrep... (cached) /usr/bin/grep -E checking for _Bool... yes checking for stdbool.h that conforms to C99 or later... yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for C/C++ restrict keyword... __restrict__ checking whether struct tm is in sys/time.h or time.h... time.h checking whether malloc (0) returns nonnull... guessing yes checking whether realloc (0, 0) returns nonnull... guessing yes checking whether lstat correctly handles trailing slash... yes checking whether stat accepts an empty string... yes checking for strftime... yes checking for floor... no checking for memset... yes checking for pow... no checking for sqrt... no checking for x86_64-linux-gnu-gcc option to support large files... none needed checking for declarations of fseeko and ftello... yes checking for isblank... yes +++++++++++++++++++++++++++++++++++++ CFLAGS now: -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops CXXFLAGS now: -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops LDFLAGS now: -Wl,-z,relro -Wl,-z,now -L/usr/lib +++++++++++++++++++++++++++++++++++++ checking for boostlib >= 1.48.0... yes +++++++++++++++++++++++++++++++++++++ BOOST_CPPFLAGS: -I/usr/include BOOST LDFLAGS: -L/usr/lib/x86_64-linux-gnu ac_boost_path: /usr ac_boost_lib_path: /usr/lib/x86_64-linux-gnu CFLAGS now: -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops CXXFLAGS now: -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops LDFLAGS now: -Wl,-z,relro -Wl,-z,now -L/usr/lib +++++++++++++++++++++++++++++++++++++ +++++++++++++++++++++++++++++++++++++ BOOST_CPPFLAGS: -I/usr/include BOOST LDFLAGS: -L/usr/lib/x86_64-linux-gnu CFLAGS now: -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -Wl,-rpath,/usr/lib/x86_64-linux-gnu CXXFLAGS now: -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops LDFLAGS now: -Wl,-z,relro -Wl,-z,now -L/usr/lib +++++++++++++++++++++++++++++++++++++ checking whether the Boost::Thread library is available... yes checking for exit in -lboost_thread... yes +++++++++++++++++++++++++++++++++++++ BOOST_CPPFLAGS: -pthread -I/usr/include BOOST LDFLAGS: -L/usr/lib/x86_64-linux-gnu ac_boost_path: /usr ac_boost_lib_path: /usr/lib/x86_64-linux-gnu BOOST_THREAD_LIB: -lboost_thread CFLAGS now: -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -Wl,-rpath,/usr/lib/x86_64-linux-gnu CXXFLAGS now: -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops LDFLAGS now: -Wl,-z,relro -Wl,-z,now -L/usr/lib +++++++++++++++++++++++++++++++++++++ +++++++++++++++++++++++++++++++++++++ BOOST_CPPFLAGS: -pthread -I/usr/include BOOST LDFLAGS: -L/usr/lib/x86_64-linux-gnu ac_boost_path: /usr ac_boost_lib_path: /usr/lib/x86_64-linux-gnu BOOST_THREAD_LIB: -lboost_thread CFLAGS now: -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -Wl,-rpath,/usr/lib/x86_64-linux-gnu CXXFLAGS now: -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include LDFLAGS now: -Wl,-z,relro -Wl,-z,now -L/usr/lib -L/usr/lib/x86_64-linux-gnu LIBS now: -lboost_thread +++++++++++++++++++++++++++++++++++++ checking whether the Boost::Regex library is available... yes checking for exit in -lboost_regex... yes +++++++++++++++++++++++++++++++++++++ BOOST_CPPFLAGS: -pthread -I/usr/include BOOST LDFLAGS: -L/usr/lib/x86_64-linux-gnu ac_boost_path: /usr ac_boost_lib_path: /usr/lib/x86_64-linux-gnu BOOST_REGEX_LIB: -lboost_regex CFLAGS now: -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -Wl,-rpath,/usr/lib/x86_64-linux-gnu CXXFLAGS now: -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include LIBS now: -lboost_thread -lboost_regex +++++++++++++++++++++++++++++++++++++ checking whether the Boost::System library is available... yes +++++++++++++++++++++++++++++++++++++ BOOST_CPPFLAGS: -pthread -I/usr/include BOOST LDFLAGS: -L/usr/lib/x86_64-linux-gnu ac_boost_path: /usr ac_boost_lib_path: /usr/lib/x86_64-linux-gnu BOOST_SYSTEM_LIB: CFLAGS now: -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -Wl,-rpath,/usr/lib/x86_64-linux-gnu CXXFLAGS now: -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include LIBS now: -lboost_thread -lboost_regex +++++++++++++++++++++++++++++++++++++ checking whether the Boost::Filesystem library is available... yes checking for exit in -lboost_filesystem... yes +++++++++++++++++++++++++++++++++++++ BOOST_CPPFLAGS: -pthread -I/usr/include BOOST LDFLAGS: -L/usr/lib/x86_64-linux-gnu ac_boost_path: /usr ac_boost_lib_path: /usr/lib/x86_64-linux-gnu BOOST_FILESYSTEM_LIB: -lboost_filesystem CFLAGS now: -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -Wl,-rpath,/usr/lib/x86_64-linux-gnu CXXFLAGS now: -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include LIBS now: -lboost_thread -lboost_regex -lboost_filesystem +++++++++++++++++++++++++++++++++++++ checking whether the Boost::IOStreams library is available... yes checking for exit in -lboost_iostreams... yes +++++++++++++++++++++++++++++++++++++ BOOST_CPPFLAGS: -pthread -I/usr/include BOOST LDFLAGS: -L/usr/lib/x86_64-linux-gnu ac_boost_path: /usr ac_boost_lib_path: /usr/lib/x86_64-linux-gnu BOOST_IOSTREAMS_LIB: -lboost_iostreams CFLAGS now: -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -Wl,-rpath,/usr/lib/x86_64-linux-gnu CXXFLAGS now: -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include LIBS now: -lboost_thread -lboost_regex -lboost_filesystem -lboost_iostreams +++++++++++++++++++++++++++++++++++++ checking for clock_gettime in -lrt... yes +++++++++++++++++++++++++++++++++++++ Need to specifically use rt library LIBS now: -lboost_thread -lboost_regex -lboost_filesystem -lboost_iostreams -lrt +++++++++++++++++++++++++++++++++++++ BOOST is through, yay. +++++++++++++++++++++++++++++++++++++ CFLAGS now: -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops CXXFLAGS now: -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include LDFLAGS now: -Wl,-z,relro -Wl,-z,now -L/usr/lib -L/usr/lib/x86_64-linux-gnu LIBS now: -lboost_thread -lboost_regex -lboost_filesystem -lboost_iostreams -lrt +++++++++++++++++++++++++++++++++++++ checking for Expat XML Parser headers in /usr/include... found checking for Expat XML Parser libraries... found checking for Expat XML Parser... yes +++++++++++++++++++++++++++++++++++++ CFLAGS now: -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -I/usr/include CXXFLAGS now: -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include LDFLAGS now: -Wl,-z,relro -Wl,-z,now -L/usr/lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib LIBS now: -lboost_thread -lboost_regex -lboost_filesystem -lboost_iostreams -lrt -lexpat +++++++++++++++++++++++++++++++++++++ checking if zlib is wanted... yes +++++++++++++++++++++++++++++++++++++ CFLAGS now: -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -I/usr/include CXXFLAGS now: -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include LDFLAGS now: -Wl,-z,relro -Wl,-z,now -L/usr/lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib LIBS now: -lboost_thread -lboost_regex -lboost_filesystem -lboost_iostreams -lrt -lexpat -lm -lz +++++++++++++++++++++++++++++++++++++ checking for gzoffset in -lz... yes checking for BZ2_bzRead in -lbz2... yes checking for flex version compatible with MIRA... yes checking for profiling settings... no checking for purify... no checking whether mira should compile in public quiet mode... yes checking whether mira should compile with bound tracking... yes checking whether mira should compile with bug tracking... yes checking whether mira should compile with extended bug tracking... no checking whether mira should compile with function trace... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/other/Makefile config.status: creating src/other/sls/Makefile config.status: creating src/other/sls/mira-createsls/Makefile config.status: creating src/other/sls/mira-createsls/bin/Makefile config.status: creating src/stdinc/Makefile config.status: creating src/debuggersupport/Makefile config.status: creating src/memorc/Makefile config.status: creating src/errorhandling/Makefile config.status: creating src/util/Makefile config.status: creating src/io/Makefile config.status: creating src/mira/Makefile config.status: creating src/caf/Makefile config.status: creating src/support/Makefile config.status: creating src/scripts/Makefile config.status: creating src/modules/Makefile config.status: creating src/version/Makefile config.status: creating src/progs/Makefile config.status: creating man/Makefile config.status: creating doc/Makefile config.status: creating doc/docbook/Makefile config.status: creating distribution/Makefile config.status: executing depfiles commands config.status: executing libtool commands -------------------------------------------------------------------------------- Summary of MIRA configuration -------------------------------------------------------------------------------- Building version ................................. 4.9.6_linux-gnu_aarch64_dynamic We are building on ............................... Linux CPU supports 64 bit? ............................. yes Compiler family .................................. gcc Compiler optimisation flags used ................. -O3 -funroll-loops Do we compile in 64 bit? ......................... yes Building completely static? ...................... no BOOST expected to compile and link? .............. yes Have OpenMP? ..................................... yes Have complete zlib support? ...................... yes Can MIRA be built on this system? ................ yes Using CFLAGS : -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -I/usr/include -Werror=uninitialized -Werror=return-type -fopenmp Using CXXFLAGS : -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp Using LDFLAGS : -Wl,-z,relro -Wl,-z,now -L/usr/lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib Using LIBS : -lboost_thread -lboost_regex -lboost_filesystem -lboost_iostreams -lrt -lexpat -lm -lz -lbz2 Looks good, we do not expect compilation problems. -------------------------------------------------------------------------------- Type 'make' to make the binaries and then 'make install' to install binaries and man pages. Type 'make docinstall' to install extensive documentation as HTML and PDF. make[1]: Leaving directory '/build/reproducible-path/mira-4.9.6' rm -f debian/mira-assembler.debhelper.log debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/reproducible-path/mira-4.9.6' # some *.cc files are created by old flex version which breaks the build # see bug #812681 find -name '*.ll' | sed -e 's/[.]ll$/.cc/' | xargs rm -f dh_auto_build make -j1 make[2]: Entering directory '/build/reproducible-path/mira-4.9.6' make all-recursive make[3]: Entering directory '/build/reproducible-path/mira-4.9.6' Making all in man make[4]: Entering directory '/build/reproducible-path/mira-4.9.6/man' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/reproducible-path/mira-4.9.6/man' Making all in src make[4]: Entering directory '/build/reproducible-path/mira-4.9.6/src' Making all in debuggersupport make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/debuggersupport' x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o dbgsupport.o dbgsupport.C rm -f libmiradebuggersupport.a x86_64-linux-gnu-ar cr libmiradebuggersupport.a dbgsupport.o x86_64-linux-gnu-ranlib libmiradebuggersupport.a make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/debuggersupport' Making all in io make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/io' Making .H out of .xxd mira_ft_set.xxd.H Making .H out of .xxd gap4_ft_so_map.xxd.H Reducing so.obo for smaller so.obo.xxd Making .H out of .xxd so.obo.xxd.H Making .H out of .xxd so2xgap4map.xxd.H Making .H out of .xxd oldso2so.xxd.H make all-am make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/io' x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o annotationmappings.o annotationmappings.C x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o exp.o exp.C x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o generalio.o generalio.C x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o fasta.o fasta.C x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o fastq-mira.o fastq-mira.C x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o phd.o phd.C x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o scf.o scf.C x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o ncbiinfoxml.o ncbiinfoxml.C /bin/bash ../../ylwrap exp_flexer.ll lex.yy.c exp_flexer.cc -- flex x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o exp_flexer.o exp_flexer.cc rm -f libmirafio.a x86_64-linux-gnu-ar cr libmirafio.a annotationmappings.o exp.o generalio.o fasta.o fastq-mira.o phd.o scf.o ncbiinfoxml.o exp_flexer.o x86_64-linux-gnu-ranlib libmirafio.a make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/io' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/io' Making all in stdinc make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/stdinc' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/stdinc' Making all in errorhandling make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/errorhandling' x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o errorhandling.o errorhandling.C rm -f libmiraerrorhandling.a x86_64-linux-gnu-ar cr libmiraerrorhandling.a errorhandling.o x86_64-linux-gnu-ranlib libmiraerrorhandling.a make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/errorhandling' Making all in util make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/util' x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o machineinfo.o machineinfo.C x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o fileanddisk.o fileanddisk.C fileanddisk.C: In function ‘int64 myGZRead(gzFile_s*&, void*, uint64)’: fileanddisk.C:173:19: warning: ignoring return value of ‘char* strerror_r(int, char*, size_t)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 173 | strerror_r(errno,buf,1024); | ~~~~~~~~~~^~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o misc.o misc.C In file included from /usr/x86_64-linux-gnu/include/c++/15/bits/requires_hosted.h:31, from /usr/x86_64-linux-gnu/include/c++/15/iostream:40, from ../../src/util/misc.H:32, from misc.C:27: /usr/x86_64-linux-gnu/include/c++/15/x86_64-linux-gnu/bits/c++config.h:714:2: warning: #warning "__STRICT_ANSI__ seems to have been undefined; this is not supported" [-Wcpp] 714 | #warning "__STRICT_ANSI__ seems to have been undefined; this is not supported" | ^~~~~~~ rm -f libmirautil.a x86_64-linux-gnu-ar cr libmirautil.a machineinfo.o fileanddisk.o misc.o x86_64-linux-gnu-ranlib libmirautil.a x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o dptools.o dptools.C rm -f libmiradptools.a x86_64-linux-gnu-ar cr libmiradptools.a dptools.o x86_64-linux-gnu-ranlib libmiradptools.a x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o fmttext.o fmttext.C rm -f libmirafmttext.a x86_64-linux-gnu-ar cr libmirafmttext.a fmttext.o x86_64-linux-gnu-ranlib libmirafmttext.a make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/util' Making all in mira make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/mira' Making .H out of .xxd adaptorsforclip.454.xxd.H Making .H out of .xxd adaptorsforclip.solexa.xxd.H Making .H out of .xxd adaptorsforclip.iontor.xxd.H Making .H out of .xxd adaptorsregex.solexa.xxd.H Making .H out of .xxd adaptorsregex.iontor.xxd.H Making .H out of .xxd seqforfilter_phix174.solexa.xxd.H make all-am make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/mira' x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o estassembly.o estassembly.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from ../../src/mira/assembly_info.H:33, from assembly.H:33, from estassembly.C:25: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ rm -f libmiraestass.a x86_64-linux-gnu-ar cr libmiraestass.a estassembly.o x86_64-linux-gnu-ranlib libmiraestass.a x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o hashstats_sdbg.o hashstats_sdbg.C In file included from /usr/include/boost/smart_ptr/detail/deprecated_macros.hpp:8, from /usr/include/boost/smart_ptr/detail/sp_counted_base.hpp:20, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:22, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/date_time/time_clock.hpp:17, from /usr/include/boost/thread/thread_time.hpp:9, from /usr/include/boost/thread/lock_types.hpp:18, from /usr/include/boost/thread/pthread/mutex.hpp:16, from /usr/include/boost/thread/mutex.hpp:16, from ../../src/mira/hashstats.H:27, from hashstats_sdbg.C:43: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o hashstats.o hashstats.C hashstats.C:1088:9: warning: ‘CEBUG’ redefined 1088 | #define CEBUG(bla) {cout << bla; cout.flush();} | ^~~~~ hashstats.C:83:9: note: this is the location of the previous definition 83 | #define CEBUG(bla) | ^~~~~ hashstats.C:1197:9: warning: ‘CEBUG’ redefined 1197 | #define CEBUG(bla) | ^~~~~ hashstats.C:1088:9: note: this is the location of the previous definition 1088 | #define CEBUG(bla) {cout << bla; cout.flush();} | ^~~~~ In file included from /usr/include/boost/smart_ptr/detail/deprecated_macros.hpp:8, from /usr/include/boost/smart_ptr/detail/sp_counted_base.hpp:20, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:22, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/date_time/time_clock.hpp:17, from /usr/include/boost/thread/thread_time.hpp:9, from /usr/include/boost/thread/lock_types.hpp:18, from /usr/include/boost/thread/pthread/thread_data.hpp:12, from /usr/include/boost/thread/thread_only.hpp:17, from /usr/include/boost/thread/thread.hpp:12, from hashstats.C:24: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o skim.o skim.C In file included from /usr/include/boost/smart_ptr/detail/deprecated_macros.hpp:8, from /usr/include/boost/smart_ptr/detail/sp_counted_base.hpp:20, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:22, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/date_time/time_clock.hpp:17, from /usr/include/boost/thread/thread_time.hpp:9, from /usr/include/boost/thread/lock_types.hpp:18, from /usr/include/boost/thread/pthread/mutex.hpp:16, from /usr/include/boost/thread/mutex.hpp:16, from ../../src/mira/skim.H:26, from skim.C:23: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o assembly.o assembly.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from ../../src/mira/assembly_info.H:33, from assembly.H:33, from assembly.C:28: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o contig.o contig.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from contig.H:42, from contig.C:28: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o read.o read.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from read.C:28: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ read.C: In member function ‘void Read::dumpAsReadname(std::ostream&)’: read.C:1242:25: warning: format ‘%x’ expects argument of type ‘unsigned int’, but argument 3 has type ‘Read*’ [-Wformat=] 1242 | sprintf(buffer, "%x", this) ; | ~^ ~~~~ | | | | | Read* | unsigned int read.C: In member function ‘void Read::dumpAsFASTA(std::ostream&, bool, bool, bool)’: read.C:1273:25: warning: format ‘%x’ expects argument of type ‘unsigned int’, but argument 3 has type ‘Read*’ [-Wformat=] 1273 | sprintf(buffer, "%x", this) ; | ~^ ~~~~ | | | | | Read* | unsigned int read.C: In member function ‘void Read::dumpAsFASTQ(std::ostream&, bool, bool, bool)’: read.C:1357:25: warning: format ‘%x’ expects argument of type ‘unsigned int’, but argument 3 has type ‘Read*’ [-Wformat=] 1357 | sprintf(buffer, "%x", this) ; | ~^ ~~~~ | | | | | Read* | unsigned int read.C: In member function ‘void Read::dumpAsFASTAQual(std::ostream&, bool, bool, bool)’: read.C:1458:25: warning: format ‘%x’ expects argument of type ‘unsigned int’, but argument 3 has type ‘Read*’ [-Wformat=] 1458 | sprintf(buffer, "%x", this) ; | ~^ ~~~~ | | | | | Read* | unsigned int read.C: In member function ‘void Read::dumpAsCAF(std::ostream&)’: read.C:1530:25: warning: format ‘%x’ expects argument of type ‘unsigned int’, but argument 3 has type ‘Read*’ [-Wformat=] 1530 | sprintf(buffer, "%x", this) ; | ~^ ~~~~ | | | | | Read* | unsigned int read.C: In member function ‘void Read::dumpAsMAF(std::ostream&)’: read.C:1945:25: warning: format ‘%x’ expects argument of type ‘unsigned int’, but argument 3 has type ‘Read*’ [-Wformat=] 1945 | sprintf(buffer, "%x", this) ; | ~^ ~~~~ | | | | | Read* | unsigned int x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o contig_analysis.o contig_analysis.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from contig_analysis.C:28: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o ads.o ads.C x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o adsfacts.o adsfacts.C x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o align.o align.C x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o assembly_info.o assembly_info.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from ../../src/mira/assembly_info.H:33, from assembly_info.C:28: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o assembly_buildcontigs.o assembly_buildcontigs.C assembly_buildcontigs.C:80:9: warning: ‘CEBUG’ redefined 80 | #define CEBUG(bla) {cout << bla; cout.flush(); } | ^~~~~ assembly_buildcontigs.C:55:9: note: this is the location of the previous definition 55 | #define CEBUG(bla) | ^~~~~ assembly_buildcontigs.C:1251:9: warning: ‘CEBUG’ redefined 1251 | #define CEBUG(bla) | ^~~~~ assembly_buildcontigs.C:80:9: note: this is the location of the previous definition 80 | #define CEBUG(bla) {cout << bla; cout.flush(); } | ^~~~~ assembly_buildcontigs.C:1332:9: warning: ‘CEBUG’ redefined 1332 | #define CEBUG(bla) {cout << bla; cout.flush(); } | ^~~~~ assembly_buildcontigs.C:1251:9: note: this is the location of the previous definition 1251 | #define CEBUG(bla) | ^~~~~ assembly_buildcontigs.C:1485:9: warning: ‘CEBUG’ redefined 1485 | #define CEBUG(bla) | ^~~~~ assembly_buildcontigs.C:1332:9: note: this is the location of the previous definition 1332 | #define CEBUG(bla) {cout << bla; cout.flush(); } | ^~~~~ assembly_buildcontigs.C:1496:9: warning: ‘CEBUG’ redefined 1496 | #define CEBUG(bla) {cout << bla; cout.flush(); } | ^~~~~ assembly_buildcontigs.C:1485:9: note: this is the location of the previous definition 1485 | #define CEBUG(bla) | ^~~~~ assembly_buildcontigs.C:1621:9: warning: ‘CEBUG’ redefined 1621 | #define CEBUG(bla) | ^~~~~ assembly_buildcontigs.C:1496:9: note: this is the location of the previous definition 1496 | #define CEBUG(bla) {cout << bla; cout.flush(); } | ^~~~~ assembly_buildcontigs.C:2304:9: warning: ‘VCOUT’ redefined 2304 | #define VCOUT(bla) | ^~~~~ assembly_buildcontigs.C:2043:9: note: this is the location of the previous definition 2043 | #define VCOUT(bla) {if(verbose) {cout << bla;} } | ^~~~~ In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from ../../src/mira/assembly_info.H:33, from ../../src/mira/assembly.H:33, from assembly_buildcontigs.C:28: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o assembly_io.o assembly_io.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from ../../src/mira/assembly_info.H:33, from ../../src/mira/assembly.H:33, from assembly_io.C:30: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o assembly_misc.o assembly_misc.C assembly_misc.C:1871:9: warning: ‘CEBUG’ redefined 1871 | #define CEBUG(bla) {cout << bla; cout.flush();} | ^~~~~ assembly_misc.C:55:9: note: this is the location of the previous definition 55 | #define CEBUG(bla) | ^~~~~ assembly_misc.C:1905:9: warning: ‘CEBUG’ redefined 1905 | #define CEBUG(bla) | ^~~~~ assembly_misc.C:1871:9: note: this is the location of the previous definition 1871 | #define CEBUG(bla) {cout << bla; cout.flush();} | ^~~~~ In file included from /usr/include/boost/smart_ptr/detail/deprecated_macros.hpp:8, from /usr/include/boost/smart_ptr/detail/atomic_count.hpp:46, from /usr/include/boost/smart_ptr/intrusive_ref_counter.hpp:18, from /usr/include/boost/filesystem/exception.hpp:21, from /usr/include/boost/filesystem.hpp:17, from assembly_misc.C:32: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o assembly_output.o assembly_output.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from ../../src/mira/assembly_info.H:33, from ../../src/mira/assembly_output.H:32, from assembly_output.C:33: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o assembly_pbcorrect.o assembly_pbcorrect.C assembly_pbcorrect.C:59:9: warning: ‘CEBUG’ redefined 59 | #define CEBUG(bla) { if(docebug) {cout << bla; cout.flush();}} | ^~~~~ assembly_pbcorrect.C:45:9: note: this is the location of the previous definition 45 | #define CEBUG(bla) | ^~~~~ In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from ../../src/mira/assembly_info.H:33, from ../../src/mira/assembly.H:33, from assembly_pbcorrect.C:26: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o assembly_reduceskimhits.o assembly_reduceskimhits.C assembly_reduceskimhits.C:1111:9: warning: ‘CEBUG’ redefined 1111 | #define CEBUG(bla) {cout << bla; cout.flush();} | ^~~~~ assembly_reduceskimhits.C:878:9: note: this is the location of the previous definition 878 | #define CEBUG(bla) | ^~~~~ assembly_reduceskimhits.C:1151:9: warning: ‘CEBUG’ redefined 1151 | #define CEBUG(bla) | ^~~~~ assembly_reduceskimhits.C:1111:9: note: this is the location of the previous definition 1111 | #define CEBUG(bla) {cout << bla; cout.flush();} | ^~~~~ assembly_reduceskimhits.C:2742:9: warning: ‘CEBUG’ redefined 2742 | #define CEBUG(bla) {cout << bla; cout.flush();} | ^~~~~ assembly_reduceskimhits.C:1151:9: note: this is the location of the previous definition 1151 | #define CEBUG(bla) | ^~~~~ assembly_reduceskimhits.C:2760:9: warning: ‘CEBUG’ redefined 2760 | #define CEBUG(bla) | ^~~~~ assembly_reduceskimhits.C:2742:9: note: this is the location of the previous definition 2742 | #define CEBUG(bla) {cout << bla; cout.flush();} | ^~~~~ assembly_reduceskimhits.C:2764:9: warning: ‘CEBUG’ redefined 2764 | #define CEBUG(bla) {cout << bla; cout.flush();} | ^~~~~ assembly_reduceskimhits.C:2760:9: note: this is the location of the previous definition 2760 | #define CEBUG(bla) | ^~~~~ assembly_reduceskimhits.C:2803:9: warning: ‘CEBUG’ redefined 2803 | #define CEBUG(bla) | ^~~~~ assembly_reduceskimhits.C:2764:9: note: this is the location of the previous definition 2764 | #define CEBUG(bla) {cout << bla; cout.flush();} | ^~~~~ assembly_reduceskimhits.C:2808:9: warning: ‘CEBUG’ redefined 2808 | #define CEBUG(bla) {cout << bla; cout.flush();} | ^~~~~ assembly_reduceskimhits.C:2803:9: note: this is the location of the previous definition 2803 | #define CEBUG(bla) | ^~~~~ assembly_reduceskimhits.C:2887:9: warning: ‘CEBUG’ redefined 2887 | #define CEBUG(bla) | ^~~~~ assembly_reduceskimhits.C:2808:9: note: this is the location of the previous definition 2808 | #define CEBUG(bla) {cout << bla; cout.flush();} | ^~~~~ In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from ../../src/mira/assembly_info.H:33, from assembly.H:33, from assembly_reduceskimhits.C:27: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o assembly_swalign.o assembly_swalign.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from ../../src/mira/assembly_info.H:33, from ../../src/mira/assembly.H:33, from assembly_swalign.C:28: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o contig_consensus.o contig_consensus.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from contig.H:42, from contig_consensus.C:27: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/x86_64-linux-gnu/include/c++/15/bits/alloc_traits.h:33, from /usr/x86_64-linux-gnu/include/c++/15/ext/alloc_traits.h:36, from /usr/x86_64-linux-gnu/include/c++/15/bits/basic_string.h:41, from /usr/x86_64-linux-gnu/include/c++/15/string:56, from /usr/x86_64-linux-gnu/include/c++/15/bits/locale_classes.h:42, from /usr/x86_64-linux-gnu/include/c++/15/bits/ios_base.h:43, from /usr/x86_64-linux-gnu/include/c++/15/ios:46, from /usr/x86_64-linux-gnu/include/c++/15/bits/ostream.h:43, from /usr/x86_64-linux-gnu/include/c++/15/ostream:42, from /usr/x86_64-linux-gnu/include/c++/15/iostream:43, from contig.H:31: In function ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = signed char; _Args = {signed char}]’, inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _Sentinel, _ForwardIterator) [with _InputIterator = move_iterator; _Sentinel = move_iterator; _ForwardIterator = signed char*]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:145:17, inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator; _ForwardIterator = signed char*]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:303:30, inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _Sentinel, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = move_iterator; _Sentinel = move_iterator; _ForwardIterator = signed char*; _Tp = signed char]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:637:37, inlined from ‘_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = signed char*; _ForwardIterator = signed char*; _Allocator = allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:691:2, inlined from ‘void std::vector<_Tp, _Alloc>::_M_fill_append(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/vector.tcc:788:48, inlined from ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:1167:18, inlined from ‘int8 Contig::priv_mic_helper_rateGoodnessLevelOfAllGroups(HDeque::const_iterator, const std::vector >&, std::vector >&, const std::vector >&)’ at contig_consensus.C:2402:37: /usr/x86_64-linux-gnu/include/c++/15/bits/stl_construct.h:133:7: warning: writing 8 bytes into a region of size 5 [-Wstringop-overflow=] 133 | ::new(static_cast(__p)) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/x86_64-linux-gnu/include/c++/15/x86_64-linux-gnu/bits/c++allocator.h:33, from /usr/x86_64-linux-gnu/include/c++/15/bits/allocator.h:46, from /usr/x86_64-linux-gnu/include/c++/15/string:45: In member function ‘_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = signed char]’, inlined from ‘static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = signed char]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/alloc_traits.h:614:28, inlined from ‘std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:387:33, inlined from ‘void std::vector<_Tp, _Alloc>::_M_fill_append(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/vector.tcc:780:42, inlined from ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:1167:18, inlined from ‘int8 Contig::priv_mic_helper_rateGoodnessLevelOfAllGroups(HDeque::const_iterator, const std::vector >&, std::vector >&, const std::vector >&)’ at contig_consensus.C:2402:37: /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: destination object of size 5 allocated by ‘operator new’ 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); | ^ In function ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = signed char; _Args = {signed char}]’, inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _Sentinel, _ForwardIterator) [with _InputIterator = move_iterator; _Sentinel = move_iterator; _ForwardIterator = signed char*]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:145:17, inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator; _ForwardIterator = signed char*]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:303:30, inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _Sentinel, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = move_iterator; _Sentinel = move_iterator; _ForwardIterator = signed char*; _Tp = signed char]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:637:37, inlined from ‘_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = signed char*; _ForwardIterator = signed char*; _Allocator = allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:691:2, inlined from ‘void std::vector<_Tp, _Alloc>::_M_fill_append(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/vector.tcc:788:48, inlined from ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:1167:18, inlined from ‘int8 Contig::priv_mic_helper_rateGoodnessLevelOfAllGroups(HDeque::const_iterator, const std::vector >&, std::vector >&, const std::vector >&)’ at contig_consensus.C:2402:37: /usr/x86_64-linux-gnu/include/c++/15/bits/stl_construct.h:133:7: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 133 | ::new(static_cast(__p)) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = signed char]’, inlined from ‘static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = signed char]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/alloc_traits.h:614:28, inlined from ‘std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:387:33, inlined from ‘void std::vector<_Tp, _Alloc>::_M_fill_append(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/vector.tcc:780:42, inlined from ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:1167:18, inlined from ‘int8 Contig::priv_mic_helper_rateGoodnessLevelOfAllGroups(HDeque::const_iterator, const std::vector >&, std::vector >&, const std::vector >&)’ at contig_consensus.C:2402:37: /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset 16 into destination object of size 5 allocated by ‘operator new’ 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); | ^ /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: destination object of size 5 allocated by ‘operator new’ /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset 16 into destination object of size 5 allocated by ‘operator new’ In function ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = signed char; _Args = {signed char}]’, inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _Sentinel, _ForwardIterator) [with _InputIterator = move_iterator; _Sentinel = move_iterator; _ForwardIterator = signed char*]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:145:17, inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator; _ForwardIterator = signed char*]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:303:30, inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _Sentinel, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = move_iterator; _Sentinel = move_iterator; _ForwardIterator = signed char*; _Tp = signed char]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:637:37, inlined from ‘_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = signed char*; _ForwardIterator = signed char*; _Allocator = allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:691:2, inlined from ‘void std::vector<_Tp, _Alloc>::_M_fill_append(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/vector.tcc:788:48, inlined from ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:1167:18, inlined from ‘int8 Contig::priv_mic_helper_rateGoodnessLevelOfAllGroups(HDeque::const_iterator, const std::vector >&, std::vector >&, const std::vector >&)’ at contig_consensus.C:2402:37: /usr/x86_64-linux-gnu/include/c++/15/bits/stl_construct.h:133:7: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 133 | ::new(static_cast(__p)) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = signed char]’, inlined from ‘static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = signed char]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/alloc_traits.h:614:28, inlined from ‘std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:387:33, inlined from ‘void std::vector<_Tp, _Alloc>::_M_fill_append(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/vector.tcc:780:42, inlined from ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:1167:18, inlined from ‘int8 Contig::priv_mic_helper_rateGoodnessLevelOfAllGroups(HDeque::const_iterator, const std::vector >&, std::vector >&, const std::vector >&)’ at contig_consensus.C:2402:37: /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset 17 into destination object of size 5 allocated by ‘operator new’ 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); | ^ /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset [1, 5] into destination object of size 5 allocated by ‘operator new’ /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset 17 into destination object of size 5 allocated by ‘operator new’ In function ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = signed char; _Args = {signed char}]’, inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _Sentinel, _ForwardIterator) [with _InputIterator = move_iterator; _Sentinel = move_iterator; _ForwardIterator = signed char*]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:145:17, inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator; _ForwardIterator = signed char*]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:303:30, inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _Sentinel, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = move_iterator; _Sentinel = move_iterator; _ForwardIterator = signed char*; _Tp = signed char]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:637:37, inlined from ‘_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = signed char*; _ForwardIterator = signed char*; _Allocator = allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:691:2, inlined from ‘void std::vector<_Tp, _Alloc>::_M_fill_append(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/vector.tcc:788:48, inlined from ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:1167:18, inlined from ‘int8 Contig::priv_mic_helper_rateGoodnessLevelOfAllGroups(HDeque::const_iterator, const std::vector >&, std::vector >&, const std::vector >&)’ at contig_consensus.C:2402:37: /usr/x86_64-linux-gnu/include/c++/15/bits/stl_construct.h:133:7: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 133 | ::new(static_cast(__p)) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = signed char]’, inlined from ‘static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = signed char]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/alloc_traits.h:614:28, inlined from ‘std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:387:33, inlined from ‘void std::vector<_Tp, _Alloc>::_M_fill_append(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/vector.tcc:780:42, inlined from ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:1167:18, inlined from ‘int8 Contig::priv_mic_helper_rateGoodnessLevelOfAllGroups(HDeque::const_iterator, const std::vector >&, std::vector >&, const std::vector >&)’ at contig_consensus.C:2402:37: /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset 18 into destination object of size 5 allocated by ‘operator new’ 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); | ^ /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset [2, 5] into destination object of size 5 allocated by ‘operator new’ /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset 18 into destination object of size 5 allocated by ‘operator new’ In function ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = signed char; _Args = {signed char}]’, inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _Sentinel, _ForwardIterator) [with _InputIterator = move_iterator; _Sentinel = move_iterator; _ForwardIterator = signed char*]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:145:17, inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator; _ForwardIterator = signed char*]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:303:30, inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _Sentinel, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = move_iterator; _Sentinel = move_iterator; _ForwardIterator = signed char*; _Tp = signed char]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:637:37, inlined from ‘_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = signed char*; _ForwardIterator = signed char*; _Allocator = allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:691:2, inlined from ‘void std::vector<_Tp, _Alloc>::_M_fill_append(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/vector.tcc:788:48, inlined from ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:1167:18, inlined from ‘int8 Contig::priv_mic_helper_rateGoodnessLevelOfAllGroups(HDeque::const_iterator, const std::vector >&, std::vector >&, const std::vector >&)’ at contig_consensus.C:2402:37: /usr/x86_64-linux-gnu/include/c++/15/bits/stl_construct.h:133:7: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 133 | ::new(static_cast(__p)) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = signed char]’, inlined from ‘static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = signed char]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/alloc_traits.h:614:28, inlined from ‘std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:387:33, inlined from ‘void std::vector<_Tp, _Alloc>::_M_fill_append(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/vector.tcc:780:42, inlined from ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:1167:18, inlined from ‘int8 Contig::priv_mic_helper_rateGoodnessLevelOfAllGroups(HDeque::const_iterator, const std::vector >&, std::vector >&, const std::vector >&)’ at contig_consensus.C:2402:37: /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset 19 into destination object of size 5 allocated by ‘operator new’ 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); | ^ /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset [3, 5] into destination object of size 5 allocated by ‘operator new’ /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset 19 into destination object of size 5 allocated by ‘operator new’ In function ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = signed char; _Args = {signed char}]’, inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _Sentinel, _ForwardIterator) [with _InputIterator = move_iterator; _Sentinel = move_iterator; _ForwardIterator = signed char*]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:145:17, inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator; _ForwardIterator = signed char*]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:303:30, inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _Sentinel, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = move_iterator; _Sentinel = move_iterator; _ForwardIterator = signed char*; _Tp = signed char]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:637:37, inlined from ‘_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = signed char*; _ForwardIterator = signed char*; _Allocator = allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:691:2, inlined from ‘void std::vector<_Tp, _Alloc>::_M_fill_append(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/vector.tcc:788:48, inlined from ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:1167:18, inlined from ‘int8 Contig::priv_mic_helper_rateGoodnessLevelOfAllGroups(HDeque::const_iterator, const std::vector >&, std::vector >&, const std::vector >&)’ at contig_consensus.C:2402:37: /usr/x86_64-linux-gnu/include/c++/15/bits/stl_construct.h:133:7: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 133 | ::new(static_cast(__p)) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = signed char]’, inlined from ‘static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = signed char]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/alloc_traits.h:614:28, inlined from ‘std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:387:33, inlined from ‘void std::vector<_Tp, _Alloc>::_M_fill_append(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/vector.tcc:780:42, inlined from ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:1167:18, inlined from ‘int8 Contig::priv_mic_helper_rateGoodnessLevelOfAllGroups(HDeque::const_iterator, const std::vector >&, std::vector >&, const std::vector >&)’ at contig_consensus.C:2402:37: /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset 20 into destination object of size 5 allocated by ‘operator new’ 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); | ^ /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset [4, 5] into destination object of size 5 allocated by ‘operator new’ /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset 20 into destination object of size 5 allocated by ‘operator new’ In function ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = signed char; _Args = {signed char}]’, inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _Sentinel, _ForwardIterator) [with _InputIterator = move_iterator; _Sentinel = move_iterator; _ForwardIterator = signed char*]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:145:17, inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator; _ForwardIterator = signed char*]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:303:30, inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _Sentinel, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = move_iterator; _Sentinel = move_iterator; _ForwardIterator = signed char*; _Tp = signed char]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:637:37, inlined from ‘_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = signed char*; _ForwardIterator = signed char*; _Allocator = allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:691:2, inlined from ‘void std::vector<_Tp, _Alloc>::_M_fill_append(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/vector.tcc:788:48, inlined from ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:1167:18, inlined from ‘int8 Contig::priv_mic_helper_rateGoodnessLevelOfAllGroups(HDeque::const_iterator, const std::vector >&, std::vector >&, const std::vector >&)’ at contig_consensus.C:2402:37: /usr/x86_64-linux-gnu/include/c++/15/bits/stl_construct.h:133:7: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 133 | ::new(static_cast(__p)) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = signed char]’, inlined from ‘static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = signed char]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/alloc_traits.h:614:28, inlined from ‘std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:387:33, inlined from ‘void std::vector<_Tp, _Alloc>::_M_fill_append(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/vector.tcc:780:42, inlined from ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:1167:18, inlined from ‘int8 Contig::priv_mic_helper_rateGoodnessLevelOfAllGroups(HDeque::const_iterator, const std::vector >&, std::vector >&, const std::vector >&)’ at contig_consensus.C:2402:37: /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset 21 into destination object of size 5 allocated by ‘operator new’ 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); | ^ /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset 5 into destination object of size 5 allocated by ‘operator new’ /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset 21 into destination object of size 5 allocated by ‘operator new’ In function ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = signed char; _Args = {signed char}]’, inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _Sentinel, _ForwardIterator) [with _InputIterator = move_iterator; _Sentinel = move_iterator; _ForwardIterator = signed char*]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:145:17, inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator; _ForwardIterator = signed char*]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:303:30, inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _Sentinel, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = move_iterator; _Sentinel = move_iterator; _ForwardIterator = signed char*; _Tp = signed char]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:637:37, inlined from ‘_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = signed char*; _ForwardIterator = signed char*; _Allocator = allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_uninitialized.h:691:2, inlined from ‘void std::vector<_Tp, _Alloc>::_M_fill_append(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/vector.tcc:788:48, inlined from ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:1167:18, inlined from ‘int8 Contig::priv_mic_helper_rateGoodnessLevelOfAllGroups(HDeque::const_iterator, const std::vector >&, std::vector >&, const std::vector >&)’ at contig_consensus.C:2402:37: /usr/x86_64-linux-gnu/include/c++/15/bits/stl_construct.h:133:7: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 133 | ::new(static_cast(__p)) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = signed char]’, inlined from ‘static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = signed char]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/alloc_traits.h:614:28, inlined from ‘std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:387:33, inlined from ‘void std::vector<_Tp, _Alloc>::_M_fill_append(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/vector.tcc:780:42, inlined from ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = signed char; _Alloc = std::allocator]’ at /usr/x86_64-linux-gnu/include/c++/15/bits/stl_vector.h:1167:18, inlined from ‘int8 Contig::priv_mic_helper_rateGoodnessLevelOfAllGroups(HDeque::const_iterator, const std::vector >&, std::vector >&, const std::vector >&)’ at contig_consensus.C:2402:37: /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset 22 into destination object of size 5 allocated by ‘operator new’ 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); | ^ /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset [6, 14] into destination object of size 5 allocated by ‘operator new’ /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:151:73: note: at offset 22 into destination object of size 5 allocated by ‘operator new’ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o contig_covanalysis.o contig_covanalysis.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from contig_covanalysis.C:26: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o contig_edit.o contig_edit.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from contig.H:42, from contig_edit.C:25: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o contig_featureinfo.o contig_featureinfo.C contig_featureinfo.C:512:9: warning: ‘CEBUGF2’ redefined 512 | #define CEBUGF2 | ^~~~~~~ contig_featureinfo.C:473:9: note: this is the location of the previous definition 473 | #define CEBUGF2(bla) | ^~~~~~~ In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from contig.H:42, from contig_featureinfo.C:28: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o contig_output.o contig_output.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from contig_output.C:28: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o contig_pairconsistency.o contig_pairconsistency.C contig_pairconsistency.C:313:9: warning: ‘CEBUG’ redefined 313 | #define CEBUG(bla) | ^~~~~ contig_pairconsistency.C:34:9: note: this is the location of the previous definition 34 | #define CEBUG(bla) {cout << bla; cout.flush();} | ^~~~~ contig_pairconsistency.C:315:9: warning: ‘CEBUG’ redefined 315 | #define CEBUG(bla) {cout << bla; cout.flush();} | ^~~~~ contig_pairconsistency.C:313:9: note: this is the location of the previous definition 313 | #define CEBUG(bla) | ^~~~~ contig_pairconsistency.C:399:9: warning: ‘CEBUG’ redefined 399 | #define CEBUG(bla) | ^~~~~ contig_pairconsistency.C:315:9: note: this is the location of the previous definition 315 | #define CEBUG(bla) {cout << bla; cout.flush();} | ^~~~~ In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from contig.H:42, from contig_pairconsistency.C:26: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o dataprocessing.o dataprocessing.C In file included from /usr/include/boost/smart_ptr/detail/deprecated_macros.hpp:8, from /usr/include/boost/smart_ptr/detail/sp_counted_base.hpp:20, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:22, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/date_time/time_clock.hpp:17, from /usr/include/boost/thread/thread_time.hpp:9, from /usr/include/boost/thread/lock_types.hpp:18, from /usr/include/boost/thread/pthread/mutex.hpp:16, from /usr/include/boost/thread/mutex.hpp:16, from ../../src/mira/hashstats.H:27, from ../../src/mira/dataprocessing.H:33, from dataprocessing.C:31: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o dynamic.o dynamic.C x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o gbf_parse.o gbf_parse.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from gbf_parse.C:32: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o gff_parse.o gff_parse.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from gff_parse.C:34: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o gff_save.o gff_save.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from gff_save.C:31: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o maf_parse.o maf_parse.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from ../../src/mira/maf_parse.H:38, from maf_parse.C:27: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o manifest.o manifest.C x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o multitag.o multitag.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from multitag.C:29: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /bin/bash ../../ylwrap parameters_flexer.ll lex.yy.c parameters_flexer.cc -- flex x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o parameters_flexer.o parameters_flexer.cc x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o parameters.o parameters.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from parameters.C:35: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o pcrcontainer.o pcrcontainer.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from pcrcontainer.C:27: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o ppathfinder.o ppathfinder.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from ../../src/mira/ppathfinder.H:35, from ppathfinder.C:25: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o preventinitfiasco.o preventinitfiasco.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from preventinitfiasco.C:32: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o readgrouplib.o readgrouplib.C x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o readlotstat.o readlotstat.C x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o readpool.o readpool.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from readpool.C:29: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o readpool_io.o readpool_io.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/readpool_io.H:45, from readpool_io.C:27: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o sam_collect.o sam_collect.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from ../../src/mira/maf_parse.H:38, from sam_collect.C:31: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o scaffolder.o scaffolder.C scaffolder.C:203:9: warning: ‘CEBUG’ redefined 203 | #define CEBUG(bla) | ^~~~~ scaffolder.C:84:9: note: this is the location of the previous definition 84 | #define CEBUG(bla) {cout << bla; cout.flush(); } | ^~~~~ In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from scaffolder.C:28: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o seqtohash.o seqtohash.C x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o simplebloomfilter.o simplebloomfilter.C x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o skim_lowbph.o skim_lowbph.C In file included from /usr/include/boost/smart_ptr/detail/deprecated_macros.hpp:8, from /usr/include/boost/smart_ptr/detail/sp_counted_base.hpp:20, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:22, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/date_time/time_clock.hpp:17, from /usr/include/boost/thread/thread_time.hpp:9, from /usr/include/boost/thread/lock_types.hpp:18, from /usr/include/boost/thread/pthread/mutex.hpp:16, from /usr/include/boost/thread/mutex.hpp:16, from skim.H:26, from skim_lowbph.C:23: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o warnings.o warnings.C rm -f libmira.a x86_64-linux-gnu-ar cr libmira.a hashstats_sdbg.o hashstats.o skim.o assembly.o contig.o read.o contig_analysis.o ads.o adsfacts.o align.o assembly_info.o assembly_buildcontigs.o assembly_io.o assembly_misc.o assembly_output.o assembly_pbcorrect.o assembly_reduceskimhits.o assembly_swalign.o contig_consensus.o contig_covanalysis.o contig_edit.o contig_featureinfo.o contig_output.o contig_pairconsistency.o dataprocessing.o dynamic.o gbf_parse.o gff_parse.o gff_save.o maf_parse.o manifest.o multitag.o parameters_flexer.o parameters.o pcrcontainer.o ppathfinder.o preventinitfiasco.o readgrouplib.o readlotstat.o readpool.o readpool_io.o sam_collect.o scaffolder.o seqtohash.o simplebloomfilter.o skim_lowbph.o warnings.o x86_64-linux-gnu-ranlib libmira.a make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/mira' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/mira' Making all in caf make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/caf' x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o caf.o caf.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/caf/caf.H:45, from caf.C:50: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /bin/bash ../../ylwrap caf_flexer.ll lex.yy.c caf_flexer.cc -- flex x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o caf_flexer.o caf_flexer.cc rm -f libmiracaf.a x86_64-linux-gnu-ar cr libmiracaf.a caf.o caf_flexer.o x86_64-linux-gnu-ranlib libmiracaf.a make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/caf' Making all in memorc make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/memorc' x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o memorc.o memorc.C memorc.C:58:6: warning: declaration of ‘void operator delete [](void*)’ has a different exception specifier 58 | void operator delete[](void *mb) | ^~~~~~~~ In file included from /usr/x86_64-linux-gnu/include/c++/15/bits/new_allocator.h:34, from /usr/x86_64-linux-gnu/include/c++/15/x86_64-linux-gnu/bits/c++allocator.h:33, from /usr/x86_64-linux-gnu/include/c++/15/bits/allocator.h:46, from /usr/x86_64-linux-gnu/include/c++/15/vector:65, from ../../src/memorc/memorc.H:6, from memorc.C:1: /usr/x86_64-linux-gnu/include/c++/15/new:145:6: note: from previous declaration ‘void operator delete [](void*) noexcept’ 145 | void operator delete[](void*) _GLIBCXX_TXN_SAFE _GLIBCXX_USE_NOEXCEPT | ^~~~~~~~ memorc.C:75:6: warning: declaration of ‘void operator delete(void*)’ has a different exception specifier 75 | void operator delete(void *mb) | ^~~~~~~~ /usr/x86_64-linux-gnu/include/c++/15/new:143:6: note: from previous declaration ‘void operator delete(void*) noexcept’ 143 | void operator delete(void*) _GLIBCXX_TXN_SAFE _GLIBCXX_USE_NOEXCEPT | ^~~~~~~~ memorc.C: In static member function ‘static void MemORC::statistics()’: memorc.C:153:39: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64’ {aka ‘long unsigned int’} [-Wformat=] 153 | printf("Current alloc counter : %llu\n", MOC_alloccounter); | ~~~^ ~~~~~~~~~~~~~~~~ | | | | | uint64 {aka long unsigned int} | long long unsigned int | %lu memorc.C:154:39: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64’ {aka ‘long unsigned int’} [-Wformat=] 154 | printf("Total checks performed : %llu\n", MOC_checksperformed); | ~~~^ ~~~~~~~~~~~~~~~~~~~ | | | | | uint64 {aka long unsigned int} | long long unsigned int | %lu memorc.C:155:39: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘std::map::size_type’ {aka ‘long unsigned int’} [-Wformat=] 155 | printf("Num. memory blocks : %llu\n", MOC_memblocks.size()); | ~~~^ ~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int std::map::size_type {aka long unsigned int} | %lu memorc.C:156:39: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘std::map::size_type’ {aka ‘long unsigned int’} [-Wformat=] 156 | printf("Num. active hot blocks : %llu\n", MOC_hotblocks.size()); | ~~~^ ~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int std::map::size_type {aka long unsigned int} | %lu memorc.C:157:39: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wformat=] 157 | printf("Num. pending hot blocks: %llu\n", MOC_hotaidsrequested.size()); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int std::vector::size_type {aka long unsigned int} | %lu memorc.C:158:39: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 158 | printf("Total mem reqested : %llu\n", MOC_reqmemalloc); | ~~~^ ~~~~~~~~~~~~~~~ | | | | | size_t {aka long unsigned int} | long long unsigned int | %lu memorc.C:159:39: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 159 | printf("Total mem allocated : %llu (including pads and fences)\n", MOC_totalmemalloc); | ~~~^ ~~~~~~~~~~~~~~~~~ | | | | long long unsigned int size_t {aka long unsigned int} | %lu memorc.C: In static member function ‘static void* MemORC::newMemBlock(size_t)’: memorc.C:225:51: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 225 | printf("Used malloc()\nTried to allocate %llu byte.\nSorry, memory allocation failed. Bailing out.\n", totaln); | ~~~^ ~~~~~~ | | | | long long unsigned int size_t {aka long unsigned int} | %lu memorc.C: In static member function ‘static void MemORC::deleteMemBlock(void*)’: memorc.C:311:42: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘uint64’ {aka ‘long unsigned int’} [-Wformat=] 311 | printf("Nearest memblock above (%d):\t",reinterpret_cast(mbI->first)-reinterpret_cast(usraddr)); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int uint64 {aka long unsigned int} | %ld memorc.C:318:43: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘uint64’ {aka ‘long unsigned int’} [-Wformat=] 318 | printf("Nearest memblock below (-%d):\t",reinterpret_cast(usraddr)-reinterpret_cast(mbI->first)); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int uint64 {aka long unsigned int} | %ld memorc.C: In static member function ‘static bool MemORC::checkMemBlock(std::map::iterator)’: memorc.C:430:63: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘long unsigned int’ [-Wformat=] 430 | printf("check: lower fence .0 destroyed at position: %d\tExpected: %x\tGot: %x\n", i*sizeof(int32),MOC_clowfencemagic[0], *fencecptr); | ~^ ~~~~~~~~~~~~~~~ | | | | int long unsigned int | %ld memorc.C:433:63: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘long unsigned int’ [-Wformat=] 433 | printf("check: lower fence .1 destroyed at position: %d\tExpected: %x\tGot: %x\n", i*sizeof(int32)+1,MOC_clowfencemagic[1], *fencecptr); | ~^ ~~~~~~~~~~~~~~~~~ | | | | int long unsigned int | %ld memorc.C:436:63: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘long unsigned int’ [-Wformat=] 436 | printf("check: lower fence .2 destroyed at position: %d\tExpected: %x\tGot: %x\n", i*sizeof(int32)+2,MOC_clowfencemagic[2], *fencecptr); | ~^ ~~~~~~~~~~~~~~~~~ | | | | int long unsigned int | %ld memorc.C:439:63: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘long unsigned int’ [-Wformat=] 439 | printf("check: lower fence .3 destroyed at position: %d\tExpected: %x\tGot: %x\n", i*sizeof(int32)+3,MOC_clowfencemagic[3], *fencecptr); | ~^ ~~~~~~~~~~~~~~~~~ | | | | int long unsigned int | %ld memorc.C:500:22: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 500 | printf("Size: %llu\n", mbI->second.size); | ~~~^ ~~~~~~~~~~~~~~~~ | | | | | size_t {aka long unsigned int} | long long unsigned int | %lu memorc.C:501:25: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64’ {aka ‘long unsigned int’} [-Wformat=] 501 | printf("AllocID: %llu\n", mbI->second.allocid); | ~~~^ ~~~~~~~~~~~~~~~~~~~ | | | | | uint64 {aka long unsigned int} | long long unsigned int | %lu memorc.C: In static member function ‘static void MemORC::printMemBlockInfo(std::map::iterator)’: memorc.C:558:18: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 558 | printf("%p\t%llu\t",mbI->first,mbI->second.size); | ~~~^ ~~~~~~~~~~~~~~~~ | | | | long long unsigned int size_t {aka long unsigned int} | %lu memorc.C:564:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64’ {aka ‘long unsigned int’} [-Wformat=] 564 | printf("\t%llu\n",mbI->second.allocid); | ~~~^ ~~~~~~~~~~~~~~~~~~~ | | | | | uint64 {aka long unsigned int} | long long unsigned int | %lu x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o main.o main.C /bin/bash ../../libtool --tag=CXX --mode=link x86_64-linux-gnu-g++ -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -L../io/ -L../util/ -L../errorhandling/ -L../mira -L../caf/ -L/usr/lib/x86_64-linux-gnu -Wl,-z,relro -Wl,-z,now -L/usr/lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib -o main main.o -lmiraerrorhandling -lboost_thread -lboost_regex -lboost_filesystem -lboost_iostreams -lrt -lexpat -lm -lz -lbz2 libtool: link: x86_64-linux-gnu-g++ -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o main main.o -L../io/ -L../util/ -L../errorhandling/ -L../mira -L../caf/ -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lmiraerrorhandling -lboost_thread -lboost_regex -lboost_filesystem -lboost_iostreams -lrt -lexpat -lm -lz -lbz2 -fopenmp -pthread rm -f libmemorc.a x86_64-linux-gnu-ar cr libmemorc.a memorc.o x86_64-linux-gnu-ranlib libmemorc.a make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/memorc' Making all in modules make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/modules' x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o mod_sigconex.o mod_sigconex.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/readpool_io.H:45, from ../../src/modules/mod_sigconex.H:35, from mod_sigconex.C:27: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o mod_scaffold.o mod_scaffold.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from mod_scaffold.C:32: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o mod_bait.o mod_bait.C In file included from /usr/include/boost/smart_ptr/detail/deprecated_macros.hpp:8, from /usr/include/boost/smart_ptr/detail/sp_counted_base.hpp:20, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:22, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/date_time/time_clock.hpp:17, from /usr/include/boost/thread/thread_time.hpp:9, from /usr/include/boost/thread/lock_types.hpp:18, from /usr/include/boost/thread/pthread/mutex.hpp:16, from /usr/include/boost/thread/mutex.hpp:16, from mod_bait.C:35: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o mod_dbgreplay.o mod_dbgreplay.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from ../../src/mira/assembly_info.H:33, from ../../src/mira/assembly.H:33, from mod_dbgreplay.C:4: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o mod_diff.o mod_diff.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from ../../src/mira/assembly_info.H:33, from ../../src/mira/assembly.H:33, from ../../src/modules/mod_diff.H:34, from mod_diff.C:29: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o mod_mer.o mod_mer.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/readpool_io.H:45, from ../../src/modules/mod_mer.H:35, from mod_mer.C:27: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o mod_mira.o mod_mira.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from ../../src/mira/assembly_info.H:33, from ../../src/mira/assembly.H:33, from mod_mira.C:43: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ mod_mira.C: In function ‘void miraMain_extractContigs(int, char**)’: mod_mira.C:414:10: warning: ignoring return value of ‘int chdir(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 414 | chdir("../.."); | ~~~~~^~~~~~~~~ mod_mira.C:439:10: warning: ignoring return value of ‘int chdir(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 439 | chdir("../.."); | ~~~~~^~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o mod_convert.o mod_convert.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/modules/mod_convert.H:34, from mod_convert.C:29: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o mod_memestim.o mod_memestim.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/pcrcontainer.H:30, from ../../src/mira/contig.H:42, from ../../src/mira/assembly_info.H:33, from ../../src/mira/assembly.H:33, from mod_memestim.C:36: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o mod_tagsnp.o mod_tagsnp.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/caf/caf.H:45, from mod_tagsnp.C:29: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o misc.o misc.C rm -f libmiramodules.a x86_64-linux-gnu-ar cr libmiramodules.a mod_sigconex.o mod_scaffold.o mod_bait.o mod_dbgreplay.o mod_diff.o mod_mer.o mod_mira.o mod_convert.o mod_memestim.o mod_tagsnp.o misc.o x86_64-linux-gnu-ranlib libmiramodules.a make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/modules' Making all in support make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/support' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/support' Making all in scripts make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/scripts' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/scripts' Making all in version make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/version' make all-am make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/version' x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o mversion.o mversion.C rm -f libmiraversion.a x86_64-linux-gnu-ar cr libmiraversion.a mversion.o x86_64-linux-gnu-ranlib libmiraversion.a make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/version' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/version' Making all in progs make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/progs' Making .C out of .xxd compileinfo.itxt make all-am make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/progs' x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -I/usr/include -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o mira.o mira.C In file included from /usr/include/boost/bind.hpp:30, from ../../src/mira/stringcontainer.H:38, from ../../src/mira/multitag.H:40, from ../../src/mira/read.H:38, from ../../src/mira/readpool.H:41, from ../../src/mira/readpool_io.H:45, from ../../src/modules/mod_bait.H:37, from mira.C:42: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -I/usr/include -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o quirks.o quirks.C Making .C out of .xxd compileinfo.itxt x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -I/usr/include -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o compileinfo.itxt.xxd.o compileinfo.itxt.xxd.C /bin/bash ../../libtool --tag=CXX --mode=link x86_64-linux-gnu-g++ -pthread -I/usr/include -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -L../version -L../modules -L../debuggersupport -L../memorc -L../io/ -L../util/ -L../errorhandling/ -L../mira -L../caf -L/usr/lib/x86_64-linux-gnu -Wl,-z,relro -Wl,-z,now -L/usr/lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib -o mira mira.o quirks.o compileinfo.itxt.xxd.o -lmiraversion -lmiramodules -lmiradebuggersupport -lmira -lmiraestass -lmiracaf -lmirautil -lmiradptools -lmirafio -lmiraerrorhandling -lmiradebuggersupport -lmirafmttext -lboost_thread -lboost_regex -lboost_filesystem -lboost_iostreams -lrt -lexpat -lm -lz -lbz2 libtool: link: x86_64-linux-gnu-g++ -I/usr/include -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o mira mira.o quirks.o compileinfo.itxt.xxd.o -L../version -L../modules -L../debuggersupport -L../memorc -L../io/ -L../util/ -L../errorhandling/ -L../mira -L../caf -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lmiraversion -lmiramodules -lmira -lmiraestass -lmiracaf -lmirautil -lmiradptools -lmirafio -lmiraerrorhandling -lmiradebuggersupport -lmirafmttext -lboost_thread -lboost_regex -lboost_filesystem -lboost_iostreams -lrt -lexpat -lm -lz -lbz2 -fopenmp -pthread x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -I/usr/include -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o miratest.o miratest.C In file included from /usr/include/boost/smart_ptr/detail/deprecated_macros.hpp:8, from /usr/include/boost/smart_ptr/detail/sp_counted_base.hpp:20, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:22, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/iostreams/chain.hpp:36, from /usr/include/boost/iostreams/filtering_streambuf.hpp:17, from /usr/include/boost/iostreams/filtering_stream.hpp:22, from ../../src/io/fastq-mira.H:31, from miratest.C:12: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /bin/bash ../../libtool --tag=CXX --mode=link x86_64-linux-gnu-g++ -pthread -I/usr/include -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -L../version -L../modules -L../debuggersupport -L../memorc -L../io/ -L../util/ -L../errorhandling/ -L../mira -L../caf -L/usr/lib/x86_64-linux-gnu -Wl,-z,relro -Wl,-z,now -L/usr/lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib -o miratest miratest.o compileinfo.itxt.xxd.o -lmiraversion -lmiramodules -lmiradebuggersupport -lmira -lmiraestass -lmiracaf -lmirautil -lmiradptools -lmirafio -lmiraerrorhandling -lmiradebuggersupport -lmirafmttext -lboost_thread -lboost_regex -lboost_filesystem -lboost_iostreams -lrt -lexpat -lm -lz -lbz2 libtool: link: x86_64-linux-gnu-g++ -I/usr/include -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o miratest miratest.o compileinfo.itxt.xxd.o -L../version -L../modules -L../debuggersupport -L../memorc -L../io/ -L../util/ -L../errorhandling/ -L../mira -L../caf -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lmiraversion -lmiramodules -lmira -lmiraestass -lmiracaf -lmirautil -lmiradptools -lmirafio -lmiraerrorhandling -lmiradebuggersupport -lmirafmttext -lboost_thread -lboost_regex -lboost_filesystem -lboost_iostreams -lrt -lexpat -lm -lz -lbz2 -fopenmp -pthread make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/progs' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/progs' Making all in other make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/other' Making all in sls make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/other/sls' Making all in mira-createsls make[7]: Entering directory '/build/reproducible-path/mira-4.9.6/src/other/sls/mira-createsls' Making all in bin make[8]: Entering directory '/build/reproducible-path/mira-4.9.6/src/other/sls/mira-createsls/bin' make[8]: Nothing to be done for 'all'. make[8]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/other/sls/mira-createsls/bin' make[8]: Entering directory '/build/reproducible-path/mira-4.9.6/src/other/sls/mira-createsls' make[8]: Nothing to be done for 'all-am'. make[8]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/other/sls/mira-createsls' make[7]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/other/sls/mira-createsls' make[7]: Entering directory '/build/reproducible-path/mira-4.9.6/src/other/sls' make[7]: Nothing to be done for 'all-am'. make[7]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/other/sls' make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/other/sls' make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/other' make[6]: Nothing to be done for 'all-am'. make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/other' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/other' make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src' make[4]: Leaving directory '/build/reproducible-path/mira-4.9.6/src' make[4]: Entering directory '/build/reproducible-path/mira-4.9.6' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/build/reproducible-path/mira-4.9.6' make[3]: Leaving directory '/build/reproducible-path/mira-4.9.6' make[2]: Leaving directory '/build/reproducible-path/mira-4.9.6' make[1]: Leaving directory '/build/reproducible-path/mira-4.9.6' create-stamp debian/debhelper-build-stamp dh_prep -a rm -f -- debian/mira-assembler.substvars rm -fr -- debian/.debhelper/generated/mira-assembler/ debian/mira-assembler/ debian/tmp/ rm -f debian/mira-assembler.debhelper.log debian/rules override_dh_auto_install-arch make[1]: Entering directory '/build/reproducible-path/mira-4.9.6' make install DESTDIR=/build/reproducible-path/mira-4.9.6/debian/mira-assembler make[2]: Entering directory '/build/reproducible-path/mira-4.9.6' make install-recursive make[3]: Entering directory '/build/reproducible-path/mira-4.9.6' Making install in man make[4]: Entering directory '/build/reproducible-path/mira-4.9.6/man' make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/man' make[5]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/build/reproducible-path/mira-4.9.6/debian/mira-assembler/usr/share/man/man1' /usr/bin/install -c -m 644 mirabait.1 miradiff.1 miramer.1 mira.1 miraconvert.1 miramem.1 '/build/reproducible-path/mira-4.9.6/debian/mira-assembler/usr/share/man/man1' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/man' make[4]: Leaving directory '/build/reproducible-path/mira-4.9.6/man' Making install in src make[4]: Entering directory '/build/reproducible-path/mira-4.9.6/src' Making install in debuggersupport make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/debuggersupport' make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/debuggersupport' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/debuggersupport' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/debuggersupport' Making install in io make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/io' make install-am make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/io' make[7]: Entering directory '/build/reproducible-path/mira-4.9.6/src/io' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/io' make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/io' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/io' Making install in stdinc make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/stdinc' make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/stdinc' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/stdinc' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/stdinc' Making install in errorhandling make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/errorhandling' make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/errorhandling' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/errorhandling' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/errorhandling' Making install in util make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/util' make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/util' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/util' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/util' Making install in mira make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/mira' make install-am make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/mira' make[7]: Entering directory '/build/reproducible-path/mira-4.9.6/src/mira' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/mira' make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/mira' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/mira' Making install in caf make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/caf' make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/caf' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/caf' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/caf' Making install in memorc make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/memorc' make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/memorc' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/memorc' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/memorc' Making install in modules make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/modules' make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/modules' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/modules' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/modules' Making install in support make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/support' make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/support' make[6]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/build/reproducible-path/mira-4.9.6/debian/mira-assembler/usr/share/mira/support_3rdparty_tools' /usr/bin/install -c -m 644 consedrc.13.0 consedtaglib.txt GTAGDB README '/build/reproducible-path/mira-4.9.6/debian/mira-assembler/usr/share/mira/support_3rdparty_tools' make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/support' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/support' Making install in scripts make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/scripts' make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/scripts' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/scripts' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/scripts' Making install in version make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/version' make install-am make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/version' make[7]: Entering directory '/build/reproducible-path/mira-4.9.6/src/version' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/version' make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/version' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/version' Making install in progs make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/progs' Making .C out of .xxd compileinfo.itxt make install-am make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/progs' Making .C out of .xxd compileinfo.itxt x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"mira\" -DPACKAGE_TARNAME=\"mira\" -DPACKAGE_VERSION=\"4.9.6\" -DPACKAGE_STRING=\"mira\ 4.9.6\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"mira\" -DVERSION=\"4.9.6\" -DHAVE_OPENMP=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DENABLE64=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DYYTEXT_POINTER=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -Drestrict=__restrict__ -DHAVE_MALLOC=1 -DHAVE_REALLOC=1 -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 -DHAVE_STAT_EMPTY_STRING_BUG=1 -DHAVE_STRFTIME=1 -DHAVE_MEMSET=1 -DHAVE_FSEEKO=1 -DHAVE_ISBLANK=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_FILESYSTEM=/\*\*/ -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_LIBRT=1 -DHAVE_GZOFFSET=1 -DBOUNDTRACKFLAG=1 -DBUGTRACKFLAG=1 -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -I/usr/include -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -c -o compileinfo.itxt.xxd.o compileinfo.itxt.xxd.C /bin/bash ../../libtool --tag=CXX --mode=link x86_64-linux-gnu-g++ -pthread -I/usr/include -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -L../version -L../modules -L../debuggersupport -L../memorc -L../io/ -L../util/ -L../errorhandling/ -L../mira -L../caf -L/usr/lib/x86_64-linux-gnu -Wl,-z,relro -Wl,-z,now -L/usr/lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib -o mira mira.o quirks.o compileinfo.itxt.xxd.o -lmiraversion -lmiramodules -lmiradebuggersupport -lmira -lmiraestass -lmiracaf -lmirautil -lmiradptools -lmirafio -lmiraerrorhandling -lmiradebuggersupport -lmirafmttext -lboost_thread -lboost_regex -lboost_filesystem -lboost_iostreams -lrt -lexpat -lm -lz -lbz2 libtool: link: x86_64-linux-gnu-g++ -I/usr/include -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o mira mira.o quirks.o compileinfo.itxt.xxd.o -L../version -L../modules -L../debuggersupport -L../memorc -L../io/ -L../util/ -L../errorhandling/ -L../mira -L../caf -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lmiraversion -lmiramodules -lmira -lmiraestass -lmiracaf -lmirautil -lmiradptools -lmirafio -lmiraerrorhandling -lmiradebuggersupport -lmirafmttext -lboost_thread -lboost_regex -lboost_filesystem -lboost_iostreams -lrt -lexpat -lm -lz -lbz2 -fopenmp -pthread /bin/bash ../../libtool --tag=CXX --mode=link x86_64-linux-gnu-g++ -pthread -I/usr/include -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -pthread -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -L../version -L../modules -L../debuggersupport -L../memorc -L../io/ -L../util/ -L../errorhandling/ -L../mira -L../caf -L/usr/lib/x86_64-linux-gnu -Wl,-z,relro -Wl,-z,now -L/usr/lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib -o miratest miratest.o compileinfo.itxt.xxd.o -lmiraversion -lmiramodules -lmiradebuggersupport -lmira -lmiraestass -lmiracaf -lmirautil -lmiradptools -lmirafio -lmiraerrorhandling -lmiradebuggersupport -lmirafmttext -lboost_thread -lboost_regex -lboost_filesystem -lboost_iostreams -lrt -lexpat -lm -lz -lbz2 libtool: link: x86_64-linux-gnu-g++ -I/usr/include -DPUBLICQUIET -DAJ_Linux64 -g -O2 -ffile-prefix-map=/build/reproducible-path/mira-4.9.6=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include -O3 -funroll-loops -I/usr/include -I/usr/include -Werror=uninitialized -Werror=return-type -Werror=parentheses -Werror=unused-value -std=c++14 -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o miratest miratest.o compileinfo.itxt.xxd.o -L../version -L../modules -L../debuggersupport -L../memorc -L../io/ -L../util/ -L../errorhandling/ -L../mira -L../caf -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lmiraversion -lmiramodules -lmira -lmiraestass -lmiracaf -lmirautil -lmiradptools -lmirafio -lmiraerrorhandling -lmiradebuggersupport -lmirafmttext -lboost_thread -lboost_regex -lboost_filesystem -lboost_iostreams -lrt -lexpat -lm -lz -lbz2 -fopenmp -pthread make[7]: Entering directory '/build/reproducible-path/mira-4.9.6/src/progs' Making .C out of .xxd compileinfo.itxt /usr/bin/mkdir -p '/build/reproducible-path/mira-4.9.6/debian/mira-assembler/usr/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c mira '/build/reproducible-path/mira-4.9.6/debian/mira-assembler/usr/bin' libtool: install: /usr/bin/install -c mira /build/reproducible-path/mira-4.9.6/debian/mira-assembler/usr/bin/mira make install-exec-hook make[8]: Entering directory '/build/reproducible-path/mira-4.9.6/src/progs' cd /build/reproducible-path/mira-4.9.6/debian/mira-assembler/usr/bin && \ rm -f miramem && \ ln -s mira miramem && \ rm -f mirabait && \ ln -s mira mirabait &&\ rm -f miraconvert && \ ln -s mira miraconvert && \ rm -f miramer && \ ln -s mira miramer make[8]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/progs' make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/progs' make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/progs' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/progs' Making install in other make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src/other' Making install in sls make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/other/sls' Making install in mira-createsls make[7]: Entering directory '/build/reproducible-path/mira-4.9.6/src/other/sls/mira-createsls' Making install in bin make[8]: Entering directory '/build/reproducible-path/mira-4.9.6/src/other/sls/mira-createsls/bin' make[9]: Entering directory '/build/reproducible-path/mira-4.9.6/src/other/sls/mira-createsls/bin' make[9]: Nothing to be done for 'install-exec-am'. make[9]: Nothing to be done for 'install-data-am'. make[9]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/other/sls/mira-createsls/bin' make[8]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/other/sls/mira-createsls/bin' make[8]: Entering directory '/build/reproducible-path/mira-4.9.6/src/other/sls/mira-createsls' make[9]: Entering directory '/build/reproducible-path/mira-4.9.6/src/other/sls/mira-createsls' make[9]: Nothing to be done for 'install-exec-am'. make[9]: Nothing to be done for 'install-data-am'. make[9]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/other/sls/mira-createsls' make[8]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/other/sls/mira-createsls' make[7]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/other/sls/mira-createsls' make[7]: Entering directory '/build/reproducible-path/mira-4.9.6/src/other/sls' make[8]: Entering directory '/build/reproducible-path/mira-4.9.6/src/other/sls' make[8]: Nothing to be done for 'install-exec-am'. make[8]: Nothing to be done for 'install-data-am'. make[8]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/other/sls' make[7]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/other/sls' make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/other/sls' make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src/other' make[7]: Entering directory '/build/reproducible-path/mira-4.9.6/src/other' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/other' make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/other' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src/other' make[5]: Entering directory '/build/reproducible-path/mira-4.9.6/src' make[6]: Entering directory '/build/reproducible-path/mira-4.9.6/src' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/reproducible-path/mira-4.9.6/src' make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6/src' make[4]: Leaving directory '/build/reproducible-path/mira-4.9.6/src' make[4]: Entering directory '/build/reproducible-path/mira-4.9.6' make[5]: Entering directory '/build/reproducible-path/mira-4.9.6' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/reproducible-path/mira-4.9.6' make[4]: Leaving directory '/build/reproducible-path/mira-4.9.6' make[3]: Leaving directory '/build/reproducible-path/mira-4.9.6' make[2]: Leaving directory '/build/reproducible-path/mira-4.9.6' make[1]: Leaving directory '/build/reproducible-path/mira-4.9.6' dh_install -a dh_installdocs -a install -m0755 -d debian/mira-assembler/usr/share/doc/mira-assembler install -m0755 -d debian/mira-assembler/usr/share/doc/mira-assembler cp --reflink=auto -a ./NEWS debian/mira-assembler/usr/share/doc/mira-assembler cp --reflink=auto -a ./README debian/mira-assembler/usr/share/doc/mira-assembler cp --reflink=auto -a ./THANKS debian/mira-assembler/usr/share/doc/mira-assembler cp --reflink=auto -a ./HELP_WANTED debian/mira-assembler/usr/share/doc/mira-assembler cp --reflink=auto -a ./debian/README.test debian/mira-assembler/usr/share/doc/mira-assembler cp --reflink=auto -a ./debian/tests/run-unit-test debian/mira-assembler/usr/share/doc/mira-assembler cp --reflink=auto -a ./debian/tests/est_assembly.conf debian/mira-assembler/usr/share/doc/mira-assembler cp --reflink=auto -a ./debian/tests/solexa1.conf debian/mira-assembler/usr/share/doc/mira-assembler cp --reflink=auto -a ./debian/tests/solexa2.conf debian/mira-assembler/usr/share/doc/mira-assembler cd './debian/tests/test_data//..' && find 'test_data' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/reproducible-path/mira-4.9.6/debian/mira-assembler/usr/share/doc/mira-assembler chmod -R u\+rw,go=rX debian/mira-assembler/usr/share/doc install -p -m0644 debian/copyright debian/mira-assembler/usr/share/doc/mira-assembler/copyright debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/mira-4.9.6' dh_installchangelogs src/mira/CHANGES.txt install -m0755 -d debian/mira-assembler/usr/share/doc/mira-assembler install -p -m0644 debian/.debhelper/generated/mira-assembler/dh_installchangelogs.dch.trimmed debian/mira-assembler/usr/share/doc/mira-assembler/changelog.Debian install -p -m0644 src/mira/CHANGES.txt debian/mira-assembler/usr/share/doc/mira-assembler/changelog make[1]: Leaving directory '/build/reproducible-path/mira-4.9.6' dh_installman -a man-recode --to-code UTF-8 --suffix .dh-new debian/mira-assembler/usr/share/man/man1/mira.1 debian/mira-assembler/usr/share/man/man1/mirabait.1 debian/mira-assembler/usr/share/man/man1/miraconvert.1 debian/mira-assembler/usr/share/man/man1/miradiff.1 debian/mira-assembler/usr/share/man/man1/miramem.1 debian/mira-assembler/usr/share/man/man1/miramer.1 mv debian/mira-assembler/usr/share/man/man1/mira.1.dh-new debian/mira-assembler/usr/share/man/man1/mira.1 mv debian/mira-assembler/usr/share/man/man1/mirabait.1.dh-new debian/mira-assembler/usr/share/man/man1/mirabait.1 mv debian/mira-assembler/usr/share/man/man1/miraconvert.1.dh-new debian/mira-assembler/usr/share/man/man1/miraconvert.1 mv debian/mira-assembler/usr/share/man/man1/miradiff.1.dh-new debian/mira-assembler/usr/share/man/man1/miradiff.1 mv debian/mira-assembler/usr/share/man/man1/miramem.1.dh-new debian/mira-assembler/usr/share/man/man1/miramem.1 mv debian/mira-assembler/usr/share/man/man1/miramer.1.dh-new debian/mira-assembler/usr/share/man/man1/miramer.1 chmod 0644 -- debian/mira-assembler/usr/share/man/man1/mira.1 debian/mira-assembler/usr/share/man/man1/mirabait.1 debian/mira-assembler/usr/share/man/man1/miraconvert.1 debian/mira-assembler/usr/share/man/man1/miradiff.1 debian/mira-assembler/usr/share/man/man1/miramem.1 debian/mira-assembler/usr/share/man/man1/miramer.1 dh_lintian -a install -m0755 -d debian/mira-assembler/usr/share/lintian/overrides install -p -m0644 debian/mira-assembler.lintian-overrides debian/mira-assembler/usr/share/lintian/overrides/mira-assembler dh_perl -a dh_link -a rm -f debian/mira-assembler/usr/bin/miramem ln -s mira debian/mira-assembler/usr/bin/miramem rm -f debian/mira-assembler/usr/bin/mirabait ln -s mira debian/mira-assembler/usr/bin/mirabait rm -f debian/mira-assembler/usr/bin/miraconvert ln -s mira debian/mira-assembler/usr/bin/miraconvert rm -f debian/mira-assembler/usr/bin/miramer ln -s mira debian/mira-assembler/usr/bin/miramer dh_strip_nondeterminism -a dh_compress -a cd debian/mira-assembler chmod a-x usr/share/doc/mira-assembler/NEWS usr/share/doc/mira-assembler/changelog usr/share/doc/mira-assembler/changelog.Debian usr/share/doc/mira-assembler/test_data/fasta_estset1/tvc_mini.fasta usr/share/doc/mira-assembler/test_data/fasta_estset1/tvc_mini.fasta.qual usr/share/doc/mira-assembler/test_data/solexa_eco_art/ecoli_backbone_in.gbf usr/share/doc/mira-assembler/test_data/solexa_eco_art/ecoli_in.solexa.fasta usr/share/doc/mira-assembler/test_data/solexa_eco_art/ecoli_in.solexa.fasta.qual usr/share/doc/mira-assembler/test_data/solexa_eco_art/ecoli_straindata_in.txt usr/share/man/man1/mira.1 usr/share/man/man1/mirabait.1 usr/share/man/man1/miraconvert.1 usr/share/man/man1/miradiff.1 usr/share/man/man1/miramem.1 usr/share/man/man1/miramer.1 gzip -9nf usr/share/doc/mira-assembler/NEWS usr/share/doc/mira-assembler/changelog usr/share/doc/mira-assembler/changelog.Debian usr/share/doc/mira-assembler/test_data/fasta_estset1/tvc_mini.fasta usr/share/doc/mira-assembler/test_data/fasta_estset1/tvc_mini.fasta.qual usr/share/doc/mira-assembler/test_data/solexa_eco_art/ecoli_backbone_in.gbf usr/share/doc/mira-assembler/test_data/solexa_eco_art/ecoli_in.solexa.fasta usr/share/doc/mira-assembler/test_data/solexa_eco_art/ecoli_in.solexa.fasta.qual usr/share/doc/mira-assembler/test_data/solexa_eco_art/ecoli_straindata_in.txt usr/share/man/man1/mira.1 usr/share/man/man1/mirabait.1 usr/share/man/man1/miraconvert.1 usr/share/man/man1/miradiff.1 usr/share/man/man1/miramem.1 usr/share/man/man1/miramer.1 cd '/build/reproducible-path/mira-4.9.6' dh_fixperms -a find debian/mira-assembler ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/mira-assembler/usr/share/doc -type f -a -true -a ! -regex 'debian/mira-assembler/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/mira-assembler/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/mira-assembler/usr/share/man debian/mira-assembler/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/mira-assembler -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/mira-assembler/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing -a dh_dwz -a dwz -- debian/mira-assembler/usr/bin/mira dh_strip -a install -m0755 -d debian/.debhelper/mira-assembler/dbgsym-root/usr/lib/debug/.build-id/db x86_64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/mira-assembler/usr/bin/mira debian/.debhelper/mira-assembler/dbgsym-root/usr/lib/debug/.build-id/db/7c3c8c4de379daa200622a59928118a077df08.debug chmod 0644 -- debian/.debhelper/mira-assembler/dbgsym-root/usr/lib/debug/.build-id/db/7c3c8c4de379daa200622a59928118a077df08.debug x86_64-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/mira-assembler/usr/bin/mira x86_64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/mira-assembler/dbgsym-root/usr/lib/debug/.build-id/db/7c3c8c4de379daa200622a59928118a077df08.debug debian/mira-assembler/usr/bin/mira install -m0755 -d debian/.debhelper/mira-assembler/dbgsym-root/usr/share/doc ln -s mira-assembler debian/.debhelper/mira-assembler/dbgsym-root/usr/share/doc/mira-assembler-dbgsym install -m0755 -d debian/.debhelper/mira-assembler dh_makeshlibs -a rm -f debian/mira-assembler/DEBIAN/shlibs dh_shlibdeps -a install -m0755 -d debian/mira-assembler/DEBIAN dpkg-shlibdeps -Tdebian/mira-assembler.substvars debian/mira-assembler/usr/bin/mira dh_installdeb -a install -m0755 -d debian/mira-assembler/DEBIAN dh_gencontrol -a install -m0755 -d debian/mira-assembler/DEBIAN echo misc:Depends= >> debian/mira-assembler.substvars echo misc:Pre-Depends= >> debian/mira-assembler.substvars install -m0755 -d debian/.debhelper/mira-assembler/dbgsym-root/DEBIAN dpkg-gencontrol -pmira-assembler -ldebian/changelog -Tdebian/mira-assembler.substvars -cdebian/control -Pdebian/.debhelper/mira-assembler/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=mira-assembler-dbgsym -DDepends="mira-assembler (= \${binary:Version})" -DDescription="debug symbols for mira-assembler" -DBuild-Ids=db7c3c8c4de379daa200622a59928118a077df08 -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/mira-assembler/dbgsym-root/DEBIAN/control dpkg-gencontrol -pmira-assembler -ldebian/changelog -Tdebian/mira-assembler.substvars -cdebian/control -Pdebian/mira-assembler chmod 0644 -- debian/mira-assembler/DEBIAN/control dh_md5sums -a install -m0755 -d debian/mira-assembler/DEBIAN cd debian/mira-assembler >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/mira-assembler/DEBIAN/md5sums install -m0755 -d debian/.debhelper/mira-assembler/dbgsym-root/DEBIAN cd debian/.debhelper/mira-assembler/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/mira-assembler/dbgsym-root/DEBIAN/md5sums dh_builddeb -a dpkg-deb --root-owner-group --build debian/mira-assembler .. dpkg-deb: building package 'mira-assembler' in '../mira-assembler_4.9.6-12_amd64.deb'. dpkg-deb --root-owner-group --build debian/.debhelper/mira-assembler/dbgsym-root .. dpkg-deb: building package 'mira-assembler-dbgsym' in '../mira-assembler-dbgsym_4.9.6-12_amd64.deb'. dpkg-genbuildinfo --build=any -O../mira_4.9.6-12_amd64.buildinfo dpkg-genchanges --build=any -O../mira_4.9.6-12_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2026-06-20T18:14:11Z +------------------------------------------------------------------------------+ | Finished Timed Build Commands Sat, 20 Jun 2026 18:14:11 +0000 | +------------------------------------------------------------------------------+ rm -Rf /build/reproducible-path/mira-4.9.6/ ------------------------------------------- I: Finished running 'rm -Rf /build/reproducible-path/mira-4.9.6/'. Finished processing commands. -------------------------------------------------------------------------------- Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Sat, 20 Jun 2026 18:14:13 +0000 | +------------------------------------------------------------------------------+ mira_4.9.6-12_amd64.changes: ---------------------------- Format: 1.8 Date: Sun, 15 Feb 2026 15:27:05 +0100 Source: mira Binary: mira-assembler mira-assembler-dbgsym Built-For-Profiles: cross nocheck Architecture: amd64 Version: 4.9.6-12 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: mira-assembler - Whole Genome Shotgun and EST Sequence Assembler Closes: 1045311 1127240 Changes: mira (4.9.6-12) unstable; urgency=medium . * d/watch: version=5 * Remove libboost-system-dev from Build-Depends Closes: #1127240 * Really fix clean target Closes: #1045311 * Remove old FSF address * cme fix dpkg-control Checksums-Sha1: 180463dce8655acc98c9378a4905fea78b1b8be9 35981260 mira-assembler-dbgsym_4.9.6-12_amd64.deb eb9b094d4bea8fc57511a1f38b1f7f1ac484e8a6 2715884 mira-assembler_4.9.6-12_amd64.deb 2b9388171b3b732575d464eb9e5707e78d0ca29e 6416 mira_4.9.6-12_amd64.buildinfo Checksums-Sha256: b144a9903eefcf896b9bdc23e1fc51f3267a6c8445b66194176962087d11349f 35981260 mira-assembler-dbgsym_4.9.6-12_amd64.deb 90fbace8c7e807fe765ef598c9e2ae0b1995d3c3ee125b599fe5127cf1021f32 2715884 mira-assembler_4.9.6-12_amd64.deb f112b110d9f571a0dbe0075725e496f8efe8a88c050d6d8f9ffaa7a6968ba9a3 6416 mira_4.9.6-12_amd64.buildinfo Files: 84108df98388072c15a08ecc9e1834de 35981260 debug optional mira-assembler-dbgsym_4.9.6-12_amd64.deb f9306f5c4c77dec837b5abdc1b77e6ad 2715884 science optional mira-assembler_4.9.6-12_amd64.deb fd6cc5e650e78eb4112ffdcde726fdbb 6416 science optional mira_4.9.6-12_amd64.buildinfo +------------------------------------------------------------------------------+ | Buildinfo Sat, 20 Jun 2026 18:14:14 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: mira Binary: mira-assembler mira-assembler-dbgsym Architecture: amd64 Version: 4.9.6-12 Checksums-Md5: 84108df98388072c15a08ecc9e1834de 35981260 mira-assembler-dbgsym_4.9.6-12_amd64.deb f9306f5c4c77dec837b5abdc1b77e6ad 2715884 mira-assembler_4.9.6-12_amd64.deb Checksums-Sha1: 180463dce8655acc98c9378a4905fea78b1b8be9 35981260 mira-assembler-dbgsym_4.9.6-12_amd64.deb eb9b094d4bea8fc57511a1f38b1f7f1ac484e8a6 2715884 mira-assembler_4.9.6-12_amd64.deb Checksums-Sha256: b144a9903eefcf896b9bdc23e1fc51f3267a6c8445b66194176962087d11349f 35981260 mira-assembler-dbgsym_4.9.6-12_amd64.deb 90fbace8c7e807fe765ef598c9e2ae0b1995d3c3ee125b599fe5127cf1021f32 2715884 mira-assembler_4.9.6-12_amd64.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Sat, 20 Jun 2026 18:14:09 +0000 Build-Path: /build/reproducible-path/mira-4.9.6 Installed-Build-Depends: autoconf (= 2.73-2), autoconf-archive (= 20241016-3), automake (= 1:1.18.1-4), autopoint (= 1.0-1), autotools-dev (= 20240727.1+nmu1), base-files (= 14.2), base-passwd (= 3.6.8+b1), bash (= 5.3-3), binutils (= 2.46.50.20260617-1), binutils-aarch64-linux-gnu (= 2.46.50.20260617-1), binutils-common (= 2.46.50.20260617-1), bsdextrautils (= 2.42.2-1), build-essential (= 12.12), bzip2 (= 1.0.8-6+b2), coreutils (= 9.10-1), cpp (= 4:15.2.0-5+b1), cpp-15 (= 15.3.0-1), cpp-15-aarch64-linux-gnu (= 15.3.0-1), cpp-aarch64-linux-gnu (= 4:15.2.0-5+b1), dash (= 0.5.12-12+b1), debconf (= 1.5.92), debhelper (= 14.1), debianutils (= 5.23.2+b1), dh-autoreconf (= 22), dh-strip-nondeterminism (= 1.15.1-1), diffutils (= 1:3.12-1+b1), dpkg (= 1.23.7), dpkg-dev (= 1.23.7), dwz (= 0.16-4), file (= 1:5.47-4), findutils (= 4.10.0-4), flex (= 2.6.4-8.2+b5), g++ (= 4:15.2.0-5+b1), g++-15 (= 15.3.0-1), g++-15-aarch64-linux-gnu (= 15.3.0-1), g++-aarch64-linux-gnu (= 4:15.2.0-5+b1), gcc (= 4:15.2.0-5+b1), gcc-15 (= 15.3.0-1), gcc-15-aarch64-linux-gnu (= 15.3.0-1), gcc-15-base (= 15.3.0-1), gcc-16-base (= 16.1.0-2), gcc-aarch64-linux-gnu (= 4:15.2.0-5+b1), gettext (= 1.0-1), gettext-base (= 1.0-1), grep (= 3.12-1+b1), groff-base (= 1.24.1-1), gzip (= 1.13-1+b1), hostname (= 3.25+b1), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-3), libarchive-zip-perl (= 1.68-1), libasan8 (= 16.1.0-2), libatomic1 (= 16.1.0-2), libattr1 (= 1:2.5.2-4), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1+b1), libbinutils (= 2.46.50.20260617-1), libblkid1 (= 2.42.2-1), libboost-atomic1.90-dev (= 1.90.0-6), libboost-atomic1.90.0 (= 1.90.0-6), libboost-chrono1.90-dev (= 1.90.0-6), libboost-chrono1.90.0 (= 1.90.0-6), libboost-container1.90-dev (= 1.90.0-6), libboost-container1.90.0 (= 1.90.0-6), libboost-date-time1.90-dev (= 1.90.0-6), libboost-date-time1.90.0 (= 1.90.0-6), libboost-exception1.90-dev (= 1.90.0-6), libboost-filesystem-dev (= 1.90.0.2), libboost-filesystem1.90-dev (= 1.90.0-6), libboost-filesystem1.90.0 (= 1.90.0-6), libboost-iostreams-dev (= 1.90.0.2), libboost-iostreams1.90-dev (= 1.90.0-6), libboost-iostreams1.90.0 (= 1.90.0-6), libboost-random1.90-dev (= 1.90.0-6), libboost-random1.90.0 (= 1.90.0-6), libboost-regex-dev (= 1.90.0.2), libboost-regex1.90-dev (= 1.90.0-6), libboost-regex1.90.0 (= 1.90.0-6), libboost-serialization1.90-dev (= 1.90.0-6), libboost-serialization1.90.0 (= 1.90.0-6), libboost-thread-dev (= 1.90.0.2), libboost-thread1.90-dev (= 1.90.0-6), libboost-thread1.90.0 (= 1.90.0-6), libboost1.90-dev (= 1.90.0-6), libbz2-1.0 (= 1.0.8-6+b2), libbz2-dev (= 1.0.8-6+b2), libc-bin (= 2.42-17), libc-dev-bin (= 2.42-17), libc-gconv-modules-extra (= 2.42-17), libc6 (= 2.42-17), libc6-dev (= 2.42-17), libcap-ng0 (= 0.9.3-1), libcc1-0 (= 16.1.0-2), libcrypt1 (= 1:4.5.1-1+b1), libctf-nobfd0 (= 2.46.50.20260617-1), libctf0 (= 2.46.50.20260617-1), libdb5.3t64 (= 5.3.28+dfsg2-11+b1), libdebconfclient0 (= 0.283), libdebhelper-perl (= 14.1), libdpkg-perl (= 1.23.7), libelf1t64 (= 0.195-1), libexpat1 (= 2.8.1-1), libexpat1-dev (= 2.8.1-1), libfile-stripnondeterminism-perl (= 1.15.1-1), libfl-dev (= 2.6.4-8.2+b5), libfl2 (= 2.6.4-8.2+b5), libgcc-15-dev (= 15.3.0-1), libgcc-s1 (= 16.1.0-2), libgdbm-compat4t64 (= 1.26-1+b2), libgdbm6t64 (= 1.26-1+b2), libgmp10 (= 2:6.3.0+dfsg-5+b2), libgomp1 (= 16.1.0-2), libgoogle-perftools-dev (= 2.18.1-1), libgoogle-perftools4t64 (= 2.18.1-1), libgprofng0 (= 2.46.50.20260617-1), libhwasan0 (= 16.1.0-2), libisl23 (= 0.27-2), libitm1 (= 16.1.0-2), libjansson4 (= 2.14-2+b4), liblsan0 (= 16.1.0-2), liblzma-dev (= 5.8.3-1), liblzma5 (= 5.8.3-1), libmagic-mgc (= 1:5.47-4), libmagic1t64 (= 1:5.47-4), libmd0 (= 1.2.0-2), libmount1 (= 2.42.2-1), libmpc3 (= 1.3.1-3), libmpfr6 (= 4.2.2-3), libpam-modules (= 1.7.0-6), libpam-modules-bin (= 1.7.0-6), libpam-runtime (= 1.7.0-6), libpam0g (= 1.7.0-6), libpcre2-8-0 (= 10.46-1+b2), libperl5.40 (= 5.40.1-8), libpipeline1 (= 1.5.8-3), libquadmath0 (= 16.1.0-2), libseccomp2 (= 2.6.0-2+b1), libselinux1 (= 3.10-1), libsframe3 (= 2.46.50.20260617-1), libsmartcols1 (= 2.42.2-1), libssl3t64 (= 3.6.3-1), libstdc++-15-dev (= 15.3.0-1), libstdc++6 (= 16.1.0-2), libsystemd0 (= 261-1), libtcmalloc-minimal4t64 (= 2.18.1-1), libtinfo6 (= 6.6+20251231-1+b1), libtool (= 2.5.4-11), libtsan2 (= 16.1.0-2), libubsan1 (= 16.1.0-2), libuchardet0 (= 0.0.8-2+b2), libudev1 (= 261-1), libunistring5 (= 1.4.2-1), libunwind-dev (= 1.8.1-0.4), libunwind8 (= 1.8.1-0.4), libuuid1 (= 2.42.2-1), libxml2-16 (= 2.15.3+dfsg-1), libzstd1 (= 1.5.7+dfsg-3+b2), linux-libc-dev (= 7.0.13-1), m4 (= 1.4.21-1), make (= 4.4.1-3+b1), man-db (= 2.13.1-1+b1), mawk (= 1.3.4.20260302-1), ncurses-base (= 6.6+20251231-1), ncurses-bin (= 6.6+20251231-1+b1), openssl-provider-legacy (= 3.6.3-1), patch (= 2.8-2+b1), perl (= 5.40.1-8), perl-base (= 5.40.1-8), perl-modules-5.40 (= 5.40.1-8), po-debconf (= 1.0.22), rpcsvc-proto (= 1.4.4-1), sed (= 4.9-3), sensible-utils (= 0.0.26), sysvinit-utils (= 3.18-1), tar (= 1.35+dfsg-4), util-linux (= 2.42.2-1), xxd (= 2:9.2.0524-1), xz-utils (= 5.8.3-1), zlib1g (= 1:1.3.dfsg+really1.3.2-3), zlib1g-dev (= 1:1.3.dfsg+really1.3.2-3) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1771165625" +------------------------------------------------------------------------------+ | Package contents Sat, 20 Jun 2026 18:14:15 +0000 | +------------------------------------------------------------------------------+ mira-assembler-dbgsym_4.9.6-12_amd64.deb ---------------------------------------- new Debian package, version 2.0. size 35981260 bytes: control archive=540 bytes. 392 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: mira-assembler-dbgsym Source: mira Version: 4.9.6-12 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 36916 Depends: mira-assembler (= 4.9.6-12) Section: debug Priority: optional Description: debug symbols for mira-assembler Build-Ids: db7c3c8c4de379daa200622a59928118a077df08 drwxr-xr-x root/root 0 2026-02-15 14:27 ./ drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/ drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/lib/ drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/lib/debug/ drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/lib/debug/.build-id/db/ -rw-r--r-- root/root 37791480 2026-02-15 14:27 ./usr/lib/debug/.build-id/db/7c3c8c4de379daa200622a59928118a077df08.debug drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/share/ drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/share/doc/ lrwxrwxrwx root/root 0 2026-02-15 14:27 ./usr/share/doc/mira-assembler-dbgsym -> mira-assembler mira-assembler_4.9.6-12_amd64.deb --------------------------------- new Debian package, version 2.0. size 2715884 bytes: control archive=2068 bytes. 1626 bytes, 32 lines control 2433 bytes, 30 lines md5sums Package: mira-assembler Source: mira Version: 4.9.6-12 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 8415 Depends: libboost-filesystem1.90.0 (>= 1.90.0), libboost-thread1.90.0 (>= 1.90.0), libc6 (>= 2.38), libexpat1 (>= 2.0.1), libgcc-s1 (>= 3.0), libgomp1 (>= 4.9), libstdc++6 (>= 14), zlib1g (>= 1:1.2.6) Recommends: mira-rfam-12s-rrna Suggests: mira-doc Section: science Priority: optional Homepage: https://sourceforge.net/p/mira-assembler/wiki/Home/ Description: Whole Genome Shotgun and EST Sequence Assembler The mira genome fragment assembler is a specialised assembler for sequencing projects classified as 'hard' due to high number of similar repeats. For expressed sequence tags (ESTs) transcripts, miraEST is specialised on reconstructing pristine mRNA transcripts while detecting and classifying single nucleotide polymorphisms (SNP) occurring in different variations thereof. . The assembler is routinely used for such various tasks as mutation detection in different cell types, similarity analysis of transcripts between organisms, and pristine assembly of sequences from various sources for oligo design in clinical microarray experiments. . The package provides the following executables: Binaries provided: * mira: for assembly of genome sequences * miramem: estimating memory needed to assemble projects. * mirabait: a "grep" like tool to select reads with kmers up to 256 bases. * miraconvert: is a tool to convert, extract and sometimes recalculate all kinds of data related to sequence assembly files. drwxr-xr-x root/root 0 2026-02-15 14:27 ./ drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/ drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/bin/ -rwxr-xr-x root/root 8473888 2026-02-15 14:27 ./usr/bin/mira lrwxrwxrwx root/root 0 2026-02-15 14:27 ./usr/bin/mirabait -> mira lrwxrwxrwx root/root 0 2026-02-15 14:27 ./usr/bin/miraconvert -> mira lrwxrwxrwx root/root 0 2026-02-15 14:27 ./usr/bin/miramem -> mira lrwxrwxrwx root/root 0 2026-02-15 14:27 ./usr/bin/miramer -> mira drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/share/ drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/share/doc/ drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/share/doc/mira-assembler/ -rw-r--r-- root/root 1384 2016-05-01 15:18 ./usr/share/doc/mira-assembler/HELP_WANTED -rw-r--r-- root/root 263 2016-05-01 15:18 ./usr/share/doc/mira-assembler/NEWS.gz -rw-r--r-- root/root 2691 2016-05-01 15:18 ./usr/share/doc/mira-assembler/README -rw-r--r-- root/root 180 2026-02-15 14:27 ./usr/share/doc/mira-assembler/README.test -rw-r--r-- root/root 3929 2016-05-01 15:18 ./usr/share/doc/mira-assembler/THANKS -rw-r--r-- root/root 898 2026-02-15 14:27 ./usr/share/doc/mira-assembler/changelog.Debian.gz -rw-r--r-- root/root 13066 2016-05-01 16:22 ./usr/share/doc/mira-assembler/changelog.gz -rw-r--r-- root/root 2208 2026-02-15 14:27 ./usr/share/doc/mira-assembler/copyright -rw-r--r-- root/root 135 2026-02-15 14:27 ./usr/share/doc/mira-assembler/est_assembly.conf -rw-r--r-- root/root 451 2026-02-15 14:27 ./usr/share/doc/mira-assembler/run-unit-test -rw-r--r-- root/root 1533 2026-02-15 14:27 ./usr/share/doc/mira-assembler/solexa1.conf -rw-r--r-- root/root 219 2026-02-15 14:27 ./usr/share/doc/mira-assembler/solexa2.conf drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/share/doc/mira-assembler/test_data/ drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/share/doc/mira-assembler/test_data/fasta_estset1/ -rw-r--r-- root/root 1159 2026-02-15 14:27 ./usr/share/doc/mira-assembler/test_data/fasta_estset1/tvc_mini.fasta.gz -rw-r--r-- root/root 3572 2026-02-15 14:27 ./usr/share/doc/mira-assembler/test_data/fasta_estset1/tvc_mini.fasta.qual.gz drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/share/doc/mira-assembler/test_data/solexa_eco_art/ -rw-r--r-- root/root 4982 2026-02-15 14:27 ./usr/share/doc/mira-assembler/test_data/solexa_eco_art/ecoli_backbone_in.gbf.gz -rw-r--r-- root/root 29260 2026-02-15 14:27 ./usr/share/doc/mira-assembler/test_data/solexa_eco_art/ecoli_in.solexa.fasta.gz -rw-r--r-- root/root 14391 2026-02-15 14:27 ./usr/share/doc/mira-assembler/test_data/solexa_eco_art/ecoli_in.solexa.fasta.qual.gz -rw-r--r-- root/root 11879 2026-02-15 14:27 ./usr/share/doc/mira-assembler/test_data/solexa_eco_art/ecoli_straindata_in.txt.gz drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/share/lintian/ drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 149 2026-02-15 14:27 ./usr/share/lintian/overrides/mira-assembler drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/share/man/ drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/share/man/man1/ -rw-r--r-- root/root 1140 2026-02-15 14:27 ./usr/share/man/man1/mira.1.gz -rw-r--r-- root/root 2649 2026-02-15 14:27 ./usr/share/man/man1/mirabait.1.gz -rw-r--r-- root/root 3577 2026-02-15 14:27 ./usr/share/man/man1/miraconvert.1.gz -rw-r--r-- root/root 568 2026-02-15 14:27 ./usr/share/man/man1/miradiff.1.gz -rw-r--r-- root/root 761 2026-02-15 14:27 ./usr/share/man/man1/miramem.1.gz -rw-r--r-- root/root 566 2026-02-15 14:27 ./usr/share/man/man1/miramer.1.gz drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/share/mira/ drwxr-xr-x root/root 0 2026-02-15 14:27 ./usr/share/mira/support_3rdparty_tools/ -rw-r--r-- root/root 2571 2026-02-15 14:27 ./usr/share/mira/support_3rdparty_tools/GTAGDB -rw-r--r-- root/root 735 2026-02-15 14:27 ./usr/share/mira/support_3rdparty_tools/README -rw-r--r-- root/root 58 2026-02-15 14:27 ./usr/share/mira/support_3rdparty_tools/consedrc.13.0 -rw-r--r-- root/root 762 2026-02-15 14:27 ./usr/share/mira/support_3rdparty_tools/consedtaglib.txt lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:arm64 Filtered Build-Depends: lintian:arm64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/build/reproducible-path/resolver-F4BPLv/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/build/reproducible-path/resolver-F4BPLv/apt_archive ./ InRelease Get:2 copy:/build/reproducible-path/resolver-F4BPLv/apt_archive ./ Release [615 B] Ign:3 copy:/build/reproducible-path/resolver-F4BPLv/apt_archive ./ Release.gpg Get:4 copy:/build/reproducible-path/resolver-F4BPLv/apt_archive ./ Sources [1504 B] Get:5 copy:/build/reproducible-path/resolver-F4BPLv/apt_archive ./ Packages [1570 B] Fetched 3689 B in 0s (134 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: appstream ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libappstream5 libapt-pkg-perl libassuan9 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libbrotli1 libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcom-err2 libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libcurl4-gnutls libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libffi8 libfile-basedir-perl libfile-find-rule-perl libfile-libmagic-perl libfile-listing-perl libfile-sharedir-perl libfont-ttf-perl libfyaml0 libgcrypt20 libglib2.0-0t64 libgnutls30t64 libgpg-error0 libgssapi-krb5-2 libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libidn2-0 libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libksba8 libldap2 liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libncursesw6 libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnpth0t64 libnumber-compare-perl libp11-kit0 libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libproc2-0 libpsl5t64 libreadline8t64 libregexp-wildcards-perl librole-tiny-perl libsasl2-2 libsasl2-modules-db libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libssh2-1t64 libstemmer0d libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libtasn1-6 libterm-readkey-perl libtext-charwidth-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-wrapi18n-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip procps readline-common shared-mime-info t1utils ucf unzip Suggested packages: apt-config-icons isoquery libxml-parser-perl rng-tools low-memory-monitor gnutls-bin krb5-doc krb5-user libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libmime-base32-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl python3 readline-doc zip Recommended packages: gnupg libcgi-fast-perl libglib2.0-data xdg-user-dirs libgpg-error-l10n libhtml-format-perl libio-compress-brotli-perl krb5-locales libldap-common liblist-someutils-xs-perl libfreezethaw-perl libgpm2 libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl publicsuffix libsasl2-modules libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl libxml-sax-expat-perl psmisc linux-sysctl-defaults The following NEW packages will be installed: appstream ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libappstream5 libapt-pkg-perl libassuan9 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libbrotli1 libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcom-err2 libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libcurl4-gnutls libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libffi8 libfile-basedir-perl libfile-find-rule-perl libfile-libmagic-perl libfile-listing-perl libfile-sharedir-perl libfont-ttf-perl libfyaml0 libgcrypt20 libglib2.0-0t64 libgnutls30t64 libgpg-error0 libgssapi-krb5-2 libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libidn2-0 libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libksba8 libldap2 liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libncursesw6 libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnpth0t64 libnumber-compare-perl libp11-kit0 libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libproc2-0 libpsl5t64 libreadline8t64 libregexp-wildcards-perl librole-tiny-perl libsasl2-2 libsasl2-modules-db libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libssh2-1t64 libstemmer0d libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libtasn1-6 libterm-readkey-perl libtext-charwidth-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-wrapi18n-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip procps readline-common sbuild-build-depends-lintian-dummy:amd64 shared-mime-info t1utils ucf unzip 0 upgraded, 176 newly installed, 0 to remove and 0 not upgraded. Need to get 23.5 MB of archives. After this operation, 97.4 MB of additional disk space will be used. Get:1 copy:/build/reproducible-path/resolver-F4BPLv/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [832 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 netbase all 6.5 [12.4 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 libncursesw6 arm64 6.6+20251231-1+b1 [125 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-9+b2 [60.1 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 procps arm64 2:4.0.4-9+b2 [867 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 readline-common all 8.3-4 [74.8 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 openssl arm64 3.6.3-1 [1483 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 ca-certificates all 20260601 [134 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 libtext-charwidth-perl arm64 0.04-12 [9172 B] Get:10 http://mirror.einval.org/debian unstable/main arm64 libtext-wrapi18n-perl all 0.06-11 [7788 B] Get:11 http://mirror.einval.org/debian unstable/main arm64 ucf all 3.0053 [41.9 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 libffi8 arm64 3.5.2-4 [22.2 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 libglib2.0-0t64 arm64 2.88.1-2 [1428 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 shared-mime-info arm64 2.4-5+b4 [754 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 libnghttp3-9 arm64 1.15.0-1 [61.9 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 libngtcp2-16 arm64 1.22.1-1 [120 kB] Get:17 http://mirror.einval.org/debian unstable/main arm64 libbrotli1 arm64 1.2.0-3 [295 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 libidn2-0 arm64 2.3.8-5 [107 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 libp11-kit0 arm64 0.26.2-3 [435 kB] Get:20 http://mirror.einval.org/debian unstable/main arm64 libtasn1-6 arm64 4.21.0-2+b1 [46.9 kB] Get:21 http://mirror.einval.org/debian unstable/main arm64 libgnutls30t64 arm64 3.8.13-1 [1434 kB] Get:22 http://mirror.einval.org/debian unstable/main arm64 libkrb5support0 arm64 1.22.1-3 [30.2 kB] Get:23 http://mirror.einval.org/debian unstable/main arm64 libcom-err2 arm64 1.47.4-1 [19.2 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 libk5crypto3 arm64 1.22.1-3 [74.7 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-6+b2 [9444 B] Get:26 http://mirror.einval.org/debian unstable/main arm64 libkrb5-3 arm64 1.22.1-3 [314 kB] Get:27 http://mirror.einval.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.22.1-3 [125 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-11 [17.1 kB] Get:29 http://mirror.einval.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-11 [52.4 kB] Get:30 http://mirror.einval.org/debian unstable/main arm64 libldap2 arm64 2.6.10+dfsg-1+b2 [172 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 libnghttp2-14 arm64 1.69.0-1 [84.2 kB] Get:32 http://mirror.einval.org/debian unstable/main arm64 libngtcp2-crypto-gnutls8 arm64 1.22.1-1 [19.5 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.5-1 [59.7 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-3 [234 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 libcurl4-gnutls arm64 8.21.0~rc3-1 [375 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 libfyaml0 arm64 0.9.4-1 [245 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libstemmer0d arm64 3.1.1-1 [132 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 libxmlb2 arm64 0.3.24-2+b1 [57.8 kB] Get:39 http://mirror.einval.org/debian unstable/main arm64 libappstream5 arm64 1.1.3-1 [211 kB] Get:40 http://mirror.einval.org/debian unstable/main arm64 appstream arm64 1.1.3-1 [600 kB] Get:41 http://mirror.einval.org/debian unstable/main arm64 diffstat arm64 1.69-1 [32.5 kB] Get:42 http://mirror.einval.org/debian unstable/main arm64 libgpg-error0 arm64 1.61-2 [84.3 kB] Get:43 http://mirror.einval.org/debian unstable/main arm64 libassuan9 arm64 3.0.2-2+b2 [57.6 kB] Get:44 http://mirror.einval.org/debian unstable/main arm64 libgcrypt20 arm64 1.12.2-1 [788 kB] Get:45 http://mirror.einval.org/debian unstable/main arm64 libreadline8t64 arm64 8.3-4 [168 kB] Get:46 http://mirror.einval.org/debian unstable/main arm64 gpgconf arm64 2.4.9-4 [117 kB] Get:47 http://mirror.einval.org/debian unstable/main arm64 libksba8 arm64 1.8.0-3 [128 kB] Get:48 http://mirror.einval.org/debian unstable/main arm64 libnpth0t64 arm64 1.8-3+b2 [22.9 kB] Get:49 http://mirror.einval.org/debian unstable/main arm64 libsqlite3-0 arm64 3.53.2-1 [899 kB] Get:50 http://mirror.einval.org/debian unstable/main arm64 gpg arm64 2.4.9-4 [570 kB] Get:51 http://mirror.einval.org/debian unstable/main arm64 iso-codes all 4.20.1-1 [3319 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 libaliased-perl all 0.34-3 [13.5 kB] Get:53 http://mirror.einval.org/debian unstable/main arm64 libapt-pkg-perl arm64 0.1.43 [64.6 kB] Get:54 http://mirror.einval.org/debian unstable/main arm64 libb-hooks-op-check-perl arm64 0.22-3+b4 [10.7 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 libdynaloader-functions-perl all 0.004-2 [12.2 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 libdevel-callchecker-perl arm64 0.009-3 [15.5 kB] Get:57 http://mirror.einval.org/debian unstable/main arm64 libparams-classify-perl arm64 0.015-2+b5 [22.3 kB] Get:58 http://mirror.einval.org/debian unstable/main arm64 libmodule-runtime-perl all 0.018-1 [17.8 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:61 http://mirror.einval.org/debian unstable/main arm64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:62 http://mirror.einval.org/debian unstable/main arm64 libvariable-magic-perl arm64 0.64-1+b2 [43.9 kB] Get:63 http://mirror.einval.org/debian unstable/main arm64 libb-hooks-endofscope-perl all 0.28-2 [17.6 kB] Get:64 http://mirror.einval.org/debian unstable/main arm64 libberkeleydb-perl arm64 0.66-2+b1 [116 kB] Get:65 http://mirror.einval.org/debian unstable/main arm64 libcapture-tiny-perl all 0.50-1 [24.6 kB] Get:66 http://mirror.einval.org/debian unstable/main arm64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:67 http://mirror.einval.org/debian unstable/main arm64 liburi-perl all 5.35-1 [112 kB] Get:68 http://mirror.einval.org/debian unstable/main arm64 libhtml-parser-perl arm64 3.83-2 [96.0 kB] Get:69 http://mirror.einval.org/debian unstable/main arm64 libcgi-pm-perl all 4.72-1 [217 kB] Get:70 http://mirror.einval.org/debian unstable/main arm64 libclass-data-inheritable-perl all 0.10-1 [8632 B] Get:71 http://mirror.einval.org/debian unstable/main arm64 libclass-inspector-perl all 1.36-3 [17.5 kB] Get:72 http://mirror.einval.org/debian unstable/main arm64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:73 http://mirror.einval.org/debian unstable/main arm64 libclass-xsaccessor-perl arm64 1.19-4+b6 [35.1 kB] Get:74 http://mirror.einval.org/debian unstable/main arm64 libclone-perl arm64 0.50-1 [20.6 kB] Get:75 http://mirror.einval.org/debian unstable/main arm64 libconfig-tiny-perl all 2.30-1 [18.9 kB] Get:76 http://mirror.einval.org/debian unstable/main arm64 libparams-util-perl arm64 1.102-3+b2 [23.9 kB] Get:77 http://mirror.einval.org/debian unstable/main arm64 libsub-install-perl all 0.929-1 [10.5 kB] Get:78 http://mirror.einval.org/debian unstable/main arm64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:79 http://mirror.einval.org/debian unstable/main arm64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:80 http://mirror.einval.org/debian unstable/main arm64 libconst-fast-perl all 0.014-2 [8792 B] Get:81 http://mirror.einval.org/debian unstable/main arm64 libcpanel-json-xs-perl arm64 4.42-1 [131 kB] Get:82 http://mirror.einval.org/debian unstable/main arm64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:83 http://mirror.einval.org/debian unstable/main arm64 libexception-class-perl all 1.45-1 [34.6 kB] Get:84 http://mirror.einval.org/debian unstable/main arm64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:85 http://mirror.einval.org/debian unstable/main arm64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:86 http://mirror.einval.org/debian unstable/main arm64 libdata-dpath-perl all 0.60-1 [41.8 kB] Get:87 http://mirror.einval.org/debian unstable/main arm64 libdata-messagepack-perl arm64 1.02-3+b1 [31.5 kB] Get:88 http://mirror.einval.org/debian unstable/main arm64 libnet-domain-tld-perl all 1.75-4 [31.5 kB] Get:89 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-domain-perl all 0.15-1 [11.9 kB] Get:90 http://mirror.einval.org/debian unstable/main arm64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:91 http://mirror.einval.org/debian unstable/main arm64 libnet-netmask-perl all 2.0003-1 [28.5 kB] Get:92 http://mirror.einval.org/debian unstable/main arm64 libnetaddr-ip-perl arm64 4.079+dfsg-2+b6 [97.8 kB] Get:93 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:94 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-uri-perl all 0.07-3 [11.0 kB] Get:95 http://mirror.einval.org/debian unstable/main arm64 libdevel-size-perl arm64 0.87-1 [23.7 kB] Get:96 http://mirror.einval.org/debian unstable/main arm64 libemail-address-xs-perl arm64 1.05-1+b5 [28.2 kB] Get:97 http://mirror.einval.org/debian unstable/main arm64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:98 http://mirror.einval.org/debian unstable/main arm64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:99 http://mirror.einval.org/debian unstable/main arm64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:100 http://mirror.einval.org/debian unstable/main arm64 libnumber-compare-perl all 0.03-3 [6332 B] Get:101 http://mirror.einval.org/debian unstable/main arm64 libtext-glob-perl all 0.11-3 [7676 B] Get:102 http://mirror.einval.org/debian unstable/main arm64 libfile-find-rule-perl all 0.35-1 [25.9 kB] Get:103 http://mirror.einval.org/debian unstable/main arm64 libfile-libmagic-perl arm64 1.23-2+b3 [31.1 kB] Get:104 http://mirror.einval.org/debian unstable/main arm64 libtimedate-perl all 2.3500-1 [64.2 kB] Get:105 http://mirror.einval.org/debian unstable/main arm64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:106 http://mirror.einval.org/debian unstable/main arm64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:107 http://mirror.einval.org/debian unstable/main arm64 libfile-sharedir-perl all 1.118-3 [16.0 kB] Get:108 http://mirror.einval.org/debian unstable/main arm64 libio-string-perl all 1.08-4 [12.1 kB] Get:109 http://mirror.einval.org/debian unstable/main arm64 libfont-ttf-perl all 1.06-2 [318 kB] Get:110 http://mirror.einval.org/debian unstable/main arm64 libio-html-perl all 1.004-3 [16.2 kB] Get:111 http://mirror.einval.org/debian unstable/main arm64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:112 http://mirror.einval.org/debian unstable/main arm64 libhttp-message-perl all 7.02-1 [79.5 kB] Get:113 http://mirror.einval.org/debian unstable/main arm64 libhtml-form-perl all 6.13-1 [32.6 kB] Get:114 http://mirror.einval.org/debian unstable/main arm64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:115 http://mirror.einval.org/debian unstable/main arm64 libhtml-tree-perl all 5.07-3 [211 kB] Get:116 http://mirror.einval.org/debian unstable/main arm64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:117 http://mirror.einval.org/debian unstable/main arm64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:118 http://mirror.einval.org/debian unstable/main arm64 perl-openssl-defaults arm64 7+b2 [6712 B] Get:119 http://mirror.einval.org/debian unstable/main arm64 libnet-ssleay-perl arm64 1.96-1 [328 kB] Get:120 http://mirror.einval.org/debian unstable/main arm64 libio-socket-ssl-perl all 2.098-1 [229 kB] Get:121 http://mirror.einval.org/debian unstable/main arm64 libnet-http-perl all 6.24-1 [23.2 kB] Get:122 http://mirror.einval.org/debian unstable/main arm64 liblwp-protocol-https-perl all 6.15-1 [10.7 kB] Get:123 http://mirror.einval.org/debian unstable/main arm64 libwww-robotrules-perl all 6.03-1 [15.8 kB] Get:124 http://mirror.einval.org/debian unstable/main arm64 libwww-perl all 6.83-1 [186 kB] Get:125 http://mirror.einval.org/debian unstable/main arm64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:126 http://mirror.einval.org/debian unstable/main arm64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:127 http://mirror.einval.org/debian unstable/main arm64 libio-interactive-perl all 1.027-1 [11.8 kB] Get:128 http://mirror.einval.org/debian unstable/main arm64 libipc-run3-perl all 0.049-1 [31.5 kB] Get:129 http://mirror.einval.org/debian unstable/main arm64 libjson-maybexs-perl all 1.004008-1 [12.9 kB] Get:130 http://mirror.einval.org/debian unstable/main arm64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:131 http://mirror.einval.org/debian unstable/main arm64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:132 http://mirror.einval.org/debian unstable/main arm64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:133 http://mirror.einval.org/debian unstable/main arm64 liblz1 arm64 1.16-1 [38.0 kB] Get:134 http://mirror.einval.org/debian unstable/main arm64 liblzo2-2 arm64 2.10-3+b2 [50.7 kB] Get:135 http://mirror.einval.org/debian unstable/main arm64 libmarkdown2 arm64 2.2.7-2.1+b2 [33.8 kB] Get:136 http://mirror.einval.org/debian unstable/main arm64 libmldbm-perl all 2.05-4 [16.8 kB] Get:137 http://mirror.einval.org/debian unstable/main arm64 librole-tiny-perl all 2.002005-1 [19.5 kB] Get:138 http://mirror.einval.org/debian unstable/main arm64 libsub-quote-perl all 2.006009-1 [21.3 kB] Get:139 http://mirror.einval.org/debian unstable/main arm64 libmoo-perl all 2.005005-1 [58.0 kB] Get:140 http://mirror.einval.org/debian unstable/main arm64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:141 http://mirror.einval.org/debian unstable/main arm64 libmoox-aliases-perl all 0.001006-3 [6996 B] Get:142 http://mirror.einval.org/debian unstable/main arm64 libmouse-perl arm64 2.6.2-1 [140 kB] Get:143 http://mirror.einval.org/debian unstable/main arm64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:144 http://mirror.einval.org/debian unstable/main arm64 libsub-identify-perl arm64 0.14-4 [10.9 kB] Get:145 http://mirror.einval.org/debian unstable/main arm64 libsub-name-perl arm64 0.28-1+b2 [12.4 kB] Get:146 http://mirror.einval.org/debian unstable/main arm64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:147 http://mirror.einval.org/debian unstable/main arm64 libpath-tiny-perl all 0.150-1 [56.4 kB] Get:148 http://mirror.einval.org/debian unstable/main arm64 libperlio-gzip-perl arm64 0.20-1+b5 [17.4 kB] Get:149 http://mirror.einval.org/debian unstable/main arm64 libperlio-utf8-strict-perl arm64 0.010-1+b4 [11.4 kB] Get:150 http://mirror.einval.org/debian unstable/main arm64 libproc-processtable-perl arm64 0.637-1+b2 [41.0 kB] Get:151 http://mirror.einval.org/debian unstable/main arm64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:152 http://mirror.einval.org/debian unstable/main arm64 libsereal-decoder-perl arm64 5.006+ds-1 [96.8 kB] Get:153 http://mirror.einval.org/debian unstable/main arm64 libsereal-encoder-perl arm64 5.006+ds-1 [99.2 kB] Get:154 http://mirror.einval.org/debian unstable/main arm64 libsort-versions-perl all 1.62-3 [8928 B] Get:155 http://mirror.einval.org/debian unstable/main arm64 libxs-parse-keyword-perl arm64 0.49-1 [64.3 kB] Get:156 http://mirror.einval.org/debian unstable/main arm64 libsyntax-keyword-try-perl arm64 0.31-1 [27.2 kB] Get:157 http://mirror.einval.org/debian unstable/main arm64 libterm-readkey-perl arm64 2.38-2+b5 [24.5 kB] Get:158 http://mirror.einval.org/debian unstable/main arm64 libtext-levenshteinxs-perl arm64 0.03-5+b5 [8792 B] Get:159 http://mirror.einval.org/debian unstable/main arm64 libtext-markdown-discount-perl arm64 0.18-1+b1 [13.5 kB] Get:160 http://mirror.einval.org/debian unstable/main arm64 libtext-xslate-perl arm64 3.5.9-2+b2 [171 kB] Get:161 http://mirror.einval.org/debian unstable/main arm64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:162 http://mirror.einval.org/debian unstable/main arm64 libtime-moment-perl arm64 0.46-1 [77.1 kB] Get:163 http://mirror.einval.org/debian unstable/main arm64 libunicode-utf8-perl arm64 0.70-2 [20.1 kB] Get:164 http://mirror.einval.org/debian unstable/main arm64 libwww-mechanize-perl all 2.21-1 [116 kB] Get:165 http://mirror.einval.org/debian unstable/main arm64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:166 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:167 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-perl all 1.02+dfsg-5 [53.6 kB] Get:168 http://mirror.einval.org/debian unstable/main arm64 libxml-libxml-perl arm64 2.0207+dfsg+really+2.0134-8 [298 kB] Get:169 http://mirror.einval.org/debian unstable/main arm64 libyaml-0-2 arm64 0.2.5-2+b1 [47.8 kB] Get:170 http://mirror.einval.org/debian unstable/main arm64 libyaml-libyaml-perl arm64 0.907.0+ds-1 [43.6 kB] Get:171 http://mirror.einval.org/debian unstable/main arm64 plzip arm64 1.13-1 [60.6 kB] Get:172 http://mirror.einval.org/debian unstable/main arm64 lzop arm64 1.04-2+b2 [82.0 kB] Get:173 http://mirror.einval.org/debian unstable/main arm64 patchutils arm64 0.4.5-1 [81.0 kB] Get:174 http://mirror.einval.org/debian unstable/main arm64 t1utils arm64 1.41-4+b2 [57.5 kB] Get:175 http://mirror.einval.org/debian unstable/main arm64 unzip arm64 6.0-29+b1 [163 kB] Get:176 http://mirror.einval.org/debian unstable/main arm64 lintian all 2.136.2 [1024 kB] Preconfiguring packages ... Fetched 23.5 MB in 0s (51.9 MB/s) Selecting previously unselected package netbase. (Reading database ... 37242 files and directories currently installed.) Preparing to unpack .../000-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package libncursesw6:arm64. Preparing to unpack .../001-libncursesw6_6.6+20251231-1+b1_arm64.deb ... Unpacking libncursesw6:arm64 (6.6+20251231-1+b1) ... Selecting previously unselected package libproc2-0:arm64. Preparing to unpack .../002-libproc2-0_2%3a4.0.4-9+b2_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.4-9+b2) ... Selecting previously unselected package procps. Preparing to unpack .../003-procps_2%3a4.0.4-9+b2_arm64.deb ... Unpacking procps (2:4.0.4-9+b2) ... Selecting previously unselected package readline-common. Preparing to unpack .../004-readline-common_8.3-4_all.deb ... Unpacking readline-common (8.3-4) ... Selecting previously unselected package openssl. Preparing to unpack .../005-openssl_3.6.3-1_arm64.deb ... Unpacking openssl (3.6.3-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../006-ca-certificates_20260601_all.deb ... Unpacking ca-certificates (20260601) ... Selecting previously unselected package libtext-charwidth-perl:arm64. Preparing to unpack .../007-libtext-charwidth-perl_0.04-12_arm64.deb ... Unpacking libtext-charwidth-perl:arm64 (0.04-12) ... Selecting previously unselected package libtext-wrapi18n-perl. Preparing to unpack .../008-libtext-wrapi18n-perl_0.06-11_all.deb ... Unpacking libtext-wrapi18n-perl (0.06-11) ... Selecting previously unselected package ucf. Preparing to unpack .../009-ucf_3.0053_all.deb ... Moving old data out of the way Unpacking ucf (3.0053) ... Selecting previously unselected package libffi8:arm64. Preparing to unpack .../010-libffi8_3.5.2-4_arm64.deb ... Unpacking libffi8:arm64 (3.5.2-4) ... Selecting previously unselected package libglib2.0-0t64:arm64. Preparing to unpack .../011-libglib2.0-0t64_2.88.1-2_arm64.deb ... Unpacking libglib2.0-0t64:arm64 (2.88.1-2) ... Selecting previously unselected package shared-mime-info. Preparing to unpack .../012-shared-mime-info_2.4-5+b4_arm64.deb ... Unpacking shared-mime-info (2.4-5+b4) ... Selecting previously unselected package libnghttp3-9:arm64. Preparing to unpack .../013-libnghttp3-9_1.15.0-1_arm64.deb ... Unpacking libnghttp3-9:arm64 (1.15.0-1) ... Selecting previously unselected package libngtcp2-16:arm64. Preparing to unpack .../014-libngtcp2-16_1.22.1-1_arm64.deb ... Unpacking libngtcp2-16:arm64 (1.22.1-1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../015-libbrotli1_1.2.0-3_arm64.deb ... Unpacking libbrotli1:arm64 (1.2.0-3) ... Selecting previously unselected package libidn2-0:arm64. Preparing to unpack .../016-libidn2-0_2.3.8-5_arm64.deb ... Unpacking libidn2-0:arm64 (2.3.8-5) ... Selecting previously unselected package libp11-kit0:arm64. Preparing to unpack .../017-libp11-kit0_0.26.2-3_arm64.deb ... Unpacking libp11-kit0:arm64 (0.26.2-3) ... Selecting previously unselected package libtasn1-6:arm64. Preparing to unpack .../018-libtasn1-6_4.21.0-2+b1_arm64.deb ... Unpacking libtasn1-6:arm64 (4.21.0-2+b1) ... Selecting previously unselected package libgnutls30t64:arm64. Preparing to unpack .../019-libgnutls30t64_3.8.13-1_arm64.deb ... Unpacking libgnutls30t64:arm64 (3.8.13-1) ... Selecting previously unselected package libkrb5support0:arm64. Preparing to unpack .../020-libkrb5support0_1.22.1-3_arm64.deb ... Unpacking libkrb5support0:arm64 (1.22.1-3) ... Selecting previously unselected package libcom-err2:arm64. Preparing to unpack .../021-libcom-err2_1.47.4-1_arm64.deb ... Unpacking libcom-err2:arm64 (1.47.4-1) ... Selecting previously unselected package libk5crypto3:arm64. Preparing to unpack .../022-libk5crypto3_1.22.1-3_arm64.deb ... Unpacking libk5crypto3:arm64 (1.22.1-3) ... Selecting previously unselected package libkeyutils1:arm64. Preparing to unpack .../023-libkeyutils1_1.6.3-6+b2_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6.3-6+b2) ... Selecting previously unselected package libkrb5-3:arm64. Preparing to unpack .../024-libkrb5-3_1.22.1-3_arm64.deb ... Unpacking libkrb5-3:arm64 (1.22.1-3) ... Selecting previously unselected package libgssapi-krb5-2:arm64. Preparing to unpack .../025-libgssapi-krb5-2_1.22.1-3_arm64.deb ... Unpacking libgssapi-krb5-2:arm64 (1.22.1-3) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../026-libsasl2-modules-db_2.1.28+dfsg1-11_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.28+dfsg1-11) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../027-libsasl2-2_2.1.28+dfsg1-11_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.28+dfsg1-11) ... Selecting previously unselected package libldap2:arm64. Preparing to unpack .../028-libldap2_2.6.10+dfsg-1+b2_arm64.deb ... Unpacking libldap2:arm64 (2.6.10+dfsg-1+b2) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../029-libnghttp2-14_1.69.0-1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.69.0-1) ... Selecting previously unselected package libngtcp2-crypto-gnutls8:arm64. Preparing to unpack .../030-libngtcp2-crypto-gnutls8_1.22.1-1_arm64.deb ... Unpacking libngtcp2-crypto-gnutls8:arm64 (1.22.1-1) ... Selecting previously unselected package libpsl5t64:arm64. Preparing to unpack .../031-libpsl5t64_0.21.5-1_arm64.deb ... Unpacking libpsl5t64:arm64 (0.21.5-1) ... Selecting previously unselected package libssh2-1t64:arm64. Preparing to unpack .../032-libssh2-1t64_1.11.1-3_arm64.deb ... Unpacking libssh2-1t64:arm64 (1.11.1-3) ... Selecting previously unselected package libcurl4-gnutls:arm64. Preparing to unpack .../033-libcurl4-gnutls_8.21.0~rc3-1_arm64.deb ... Unpacking libcurl4-gnutls:arm64 (8.21.0~rc3-1) ... Selecting previously unselected package libfyaml0:arm64. Preparing to unpack .../034-libfyaml0_0.9.4-1_arm64.deb ... Unpacking libfyaml0:arm64 (0.9.4-1) ... Selecting previously unselected package libstemmer0d:arm64. Preparing to unpack .../035-libstemmer0d_3.1.1-1_arm64.deb ... Unpacking libstemmer0d:arm64 (3.1.1-1) ... Selecting previously unselected package libxmlb2:arm64. Preparing to unpack .../036-libxmlb2_0.3.24-2+b1_arm64.deb ... Unpacking libxmlb2:arm64 (0.3.24-2+b1) ... Selecting previously unselected package libappstream5:arm64. Preparing to unpack .../037-libappstream5_1.1.3-1_arm64.deb ... Unpacking libappstream5:arm64 (1.1.3-1) ... Selecting previously unselected package appstream. Preparing to unpack .../038-appstream_1.1.3-1_arm64.deb ... Unpacking appstream (1.1.3-1) ... Selecting previously unselected package diffstat. Preparing to unpack .../039-diffstat_1.69-1_arm64.deb ... Unpacking diffstat (1.69-1) ... Selecting previously unselected package libgpg-error0:arm64. Preparing to unpack .../040-libgpg-error0_1.61-2_arm64.deb ... Unpacking libgpg-error0:arm64 (1.61-2) ... Selecting previously unselected package libassuan9:arm64. Preparing to unpack .../041-libassuan9_3.0.2-2+b2_arm64.deb ... Unpacking libassuan9:arm64 (3.0.2-2+b2) ... Selecting previously unselected package libgcrypt20:arm64. Preparing to unpack .../042-libgcrypt20_1.12.2-1_arm64.deb ... Unpacking libgcrypt20:arm64 (1.12.2-1) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../043-libreadline8t64_8.3-4_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.3-4) ... Selecting previously unselected package gpgconf. Preparing to unpack .../044-gpgconf_2.4.9-4_arm64.deb ... Unpacking gpgconf (2.4.9-4) ... Selecting previously unselected package libksba8:arm64. Preparing to unpack .../045-libksba8_1.8.0-3_arm64.deb ... Unpacking libksba8:arm64 (1.8.0-3) ... Selecting previously unselected package libnpth0t64:arm64. Preparing to unpack .../046-libnpth0t64_1.8-3+b2_arm64.deb ... Unpacking libnpth0t64:arm64 (1.8-3+b2) ... Selecting previously unselected package libsqlite3-0:arm64. Preparing to unpack .../047-libsqlite3-0_3.53.2-1_arm64.deb ... Unpacking libsqlite3-0:arm64 (3.53.2-1) ... Selecting previously unselected package gpg. Preparing to unpack .../048-gpg_2.4.9-4_arm64.deb ... Unpacking gpg (2.4.9-4) ... Selecting previously unselected package iso-codes. Preparing to unpack .../049-iso-codes_4.20.1-1_all.deb ... Unpacking iso-codes (4.20.1-1) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../050-libaliased-perl_0.34-3_all.deb ... Unpacking libaliased-perl (0.34-3) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../051-libapt-pkg-perl_0.1.43_arm64.deb ... Unpacking libapt-pkg-perl (0.1.43) ... Selecting previously unselected package libb-hooks-op-check-perl:arm64. Preparing to unpack .../052-libb-hooks-op-check-perl_0.22-3+b4_arm64.deb ... Unpacking libb-hooks-op-check-perl:arm64 (0.22-3+b4) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../053-libdynaloader-functions-perl_0.004-2_all.deb ... Unpacking libdynaloader-functions-perl (0.004-2) ... Selecting previously unselected package libdevel-callchecker-perl:arm64. Preparing to unpack .../054-libdevel-callchecker-perl_0.009-3_arm64.deb ... Unpacking libdevel-callchecker-perl:arm64 (0.009-3) ... Selecting previously unselected package libparams-classify-perl:arm64. Preparing to unpack .../055-libparams-classify-perl_0.015-2+b5_arm64.deb ... Unpacking libparams-classify-perl:arm64 (0.015-2+b5) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../056-libmodule-runtime-perl_0.018-1_all.deb ... Unpacking libmodule-runtime-perl (0.018-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../057-libtry-tiny-perl_0.32-1_all.deb ... Unpacking libtry-tiny-perl (0.32-1) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../058-libmodule-implementation-perl_0.09-2_all.deb ... Unpacking libmodule-implementation-perl (0.09-2) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../059-libsub-exporter-progressive-perl_0.001013-3_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-3) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../060-libvariable-magic-perl_0.64-1+b2_arm64.deb ... Unpacking libvariable-magic-perl (0.64-1+b2) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../061-libb-hooks-endofscope-perl_0.28-2_all.deb ... Unpacking libb-hooks-endofscope-perl (0.28-2) ... Selecting previously unselected package libberkeleydb-perl:arm64. Preparing to unpack .../062-libberkeleydb-perl_0.66-2+b1_arm64.deb ... Unpacking libberkeleydb-perl:arm64 (0.66-2+b1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../063-libcapture-tiny-perl_0.50-1_all.deb ... Unpacking libcapture-tiny-perl (0.50-1) ... Selecting previously unselected package libhtml-tagset-perl. Preparing to unpack .../064-libhtml-tagset-perl_3.24-1_all.deb ... Unpacking libhtml-tagset-perl (3.24-1) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../065-liburi-perl_5.35-1_all.deb ... Unpacking liburi-perl (5.35-1) ... Selecting previously unselected package libhtml-parser-perl:arm64. Preparing to unpack .../066-libhtml-parser-perl_3.83-2_arm64.deb ... Unpacking libhtml-parser-perl:arm64 (3.83-2) ... Selecting previously unselected package libcgi-pm-perl. Preparing to unpack .../067-libcgi-pm-perl_4.72-1_all.deb ... Unpacking libcgi-pm-perl (4.72-1) ... Selecting previously unselected package libclass-data-inheritable-perl. Preparing to unpack .../068-libclass-data-inheritable-perl_0.10-1_all.deb ... Unpacking libclass-data-inheritable-perl (0.10-1) ... Selecting previously unselected package libclass-inspector-perl. Preparing to unpack .../069-libclass-inspector-perl_1.36-3_all.deb ... Unpacking libclass-inspector-perl (1.36-3) ... Selecting previously unselected package libclass-method-modifiers-perl. Preparing to unpack .../070-libclass-method-modifiers-perl_2.15-1_all.deb ... Unpacking libclass-method-modifiers-perl (2.15-1) ... Selecting previously unselected package libclass-xsaccessor-perl. Preparing to unpack .../071-libclass-xsaccessor-perl_1.19-4+b6_arm64.deb ... Unpacking libclass-xsaccessor-perl (1.19-4+b6) ... Selecting previously unselected package libclone-perl:arm64. Preparing to unpack .../072-libclone-perl_0.50-1_arm64.deb ... Unpacking libclone-perl:arm64 (0.50-1) ... Selecting previously unselected package libconfig-tiny-perl. Preparing to unpack .../073-libconfig-tiny-perl_2.30-1_all.deb ... Unpacking libconfig-tiny-perl (2.30-1) ... Selecting previously unselected package libparams-util-perl. Preparing to unpack .../074-libparams-util-perl_1.102-3+b2_arm64.deb ... Unpacking libparams-util-perl (1.102-3+b2) ... Selecting previously unselected package libsub-install-perl. Preparing to unpack .../075-libsub-install-perl_0.929-1_all.deb ... Unpacking libsub-install-perl (0.929-1) ... Selecting previously unselected package libdata-optlist-perl. Preparing to unpack .../076-libdata-optlist-perl_0.114-1_all.deb ... Unpacking libdata-optlist-perl (0.114-1) ... Selecting previously unselected package libsub-exporter-perl. Preparing to unpack .../077-libsub-exporter-perl_0.990-1_all.deb ... Unpacking libsub-exporter-perl (0.990-1) ... Selecting previously unselected package libconst-fast-perl. Preparing to unpack .../078-libconst-fast-perl_0.014-2_all.deb ... Unpacking libconst-fast-perl (0.014-2) ... Selecting previously unselected package libcpanel-json-xs-perl:arm64. Preparing to unpack .../079-libcpanel-json-xs-perl_4.42-1_arm64.deb ... Unpacking libcpanel-json-xs-perl:arm64 (4.42-1) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../080-libdevel-stacktrace-perl_2.0500-1_all.deb ... Unpacking libdevel-stacktrace-perl (2.0500-1) ... Selecting previously unselected package libexception-class-perl. Preparing to unpack .../081-libexception-class-perl_1.45-1_all.deb ... Unpacking libexception-class-perl (1.45-1) ... Selecting previously unselected package libiterator-perl. Preparing to unpack .../082-libiterator-perl_0.03+ds1-2_all.deb ... Unpacking libiterator-perl (0.03+ds1-2) ... Selecting previously unselected package libiterator-util-perl. Preparing to unpack .../083-libiterator-util-perl_0.02+ds1-2_all.deb ... Unpacking libiterator-util-perl (0.02+ds1-2) ... Selecting previously unselected package libdata-dpath-perl. Preparing to unpack .../084-libdata-dpath-perl_0.60-1_all.deb ... Unpacking libdata-dpath-perl (0.60-1) ... Selecting previously unselected package libdata-messagepack-perl. Preparing to unpack .../085-libdata-messagepack-perl_1.02-3+b1_arm64.deb ... Unpacking libdata-messagepack-perl (1.02-3+b1) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../086-libnet-domain-tld-perl_1.75-4_all.deb ... Unpacking libnet-domain-tld-perl (1.75-4) ... Selecting previously unselected package libdata-validate-domain-perl. Preparing to unpack .../087-libdata-validate-domain-perl_0.15-1_all.deb ... Unpacking libdata-validate-domain-perl (0.15-1) ... Selecting previously unselected package libnet-ipv6addr-perl. Preparing to unpack .../088-libnet-ipv6addr-perl_1.02-1_all.deb ... Unpacking libnet-ipv6addr-perl (1.02-1) ... Selecting previously unselected package libnet-netmask-perl. Preparing to unpack .../089-libnet-netmask-perl_2.0003-1_all.deb ... Unpacking libnet-netmask-perl (2.0003-1) ... Selecting previously unselected package libnetaddr-ip-perl. Preparing to unpack .../090-libnetaddr-ip-perl_4.079+dfsg-2+b6_arm64.deb ... Unpacking libnetaddr-ip-perl (4.079+dfsg-2+b6) ... Selecting previously unselected package libdata-validate-ip-perl. Preparing to unpack .../091-libdata-validate-ip-perl_0.31-1_all.deb ... Unpacking libdata-validate-ip-perl (0.31-1) ... Selecting previously unselected package libdata-validate-uri-perl. Preparing to unpack .../092-libdata-validate-uri-perl_0.07-3_all.deb ... Unpacking libdata-validate-uri-perl (0.07-3) ... Selecting previously unselected package libdevel-size-perl. Preparing to unpack .../093-libdevel-size-perl_0.87-1_arm64.deb ... Unpacking libdevel-size-perl (0.87-1) ... Selecting previously unselected package libemail-address-xs-perl. Preparing to unpack .../094-libemail-address-xs-perl_1.05-1+b5_arm64.deb ... Unpacking libemail-address-xs-perl (1.05-1+b5) ... Selecting previously unselected package libencode-locale-perl. Preparing to unpack .../095-libencode-locale-perl_1.05-3_all.deb ... Unpacking libencode-locale-perl (1.05-3) ... Selecting previously unselected package libipc-system-simple-perl. Preparing to unpack .../096-libipc-system-simple-perl_1.30-2_all.deb ... Unpacking libipc-system-simple-perl (1.30-2) ... Selecting previously unselected package libfile-basedir-perl. Preparing to unpack .../097-libfile-basedir-perl_0.09-2_all.deb ... Unpacking libfile-basedir-perl (0.09-2) ... Selecting previously unselected package libnumber-compare-perl. Preparing to unpack .../098-libnumber-compare-perl_0.03-3_all.deb ... Unpacking libnumber-compare-perl (0.03-3) ... Selecting previously unselected package libtext-glob-perl. Preparing to unpack .../099-libtext-glob-perl_0.11-3_all.deb ... Unpacking libtext-glob-perl (0.11-3) ... Selecting previously unselected package libfile-find-rule-perl. Preparing to unpack .../100-libfile-find-rule-perl_0.35-1_all.deb ... Unpacking libfile-find-rule-perl (0.35-1) ... Selecting previously unselected package libfile-libmagic-perl. Preparing to unpack .../101-libfile-libmagic-perl_1.23-2+b3_arm64.deb ... Unpacking libfile-libmagic-perl (1.23-2+b3) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../102-libtimedate-perl_2.3500-1_all.deb ... Unpacking libtimedate-perl (2.3500-1) ... Selecting previously unselected package libhttp-date-perl. Preparing to unpack .../103-libhttp-date-perl_6.06-1_all.deb ... Unpacking libhttp-date-perl (6.06-1) ... Selecting previously unselected package libfile-listing-perl. Preparing to unpack .../104-libfile-listing-perl_6.16-1_all.deb ... Unpacking libfile-listing-perl (6.16-1) ... Selecting previously unselected package libfile-sharedir-perl. Preparing to unpack .../105-libfile-sharedir-perl_1.118-3_all.deb ... Unpacking libfile-sharedir-perl (1.118-3) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../106-libio-string-perl_1.08-4_all.deb ... Unpacking libio-string-perl (1.08-4) ... Selecting previously unselected package libfont-ttf-perl. Preparing to unpack .../107-libfont-ttf-perl_1.06-2_all.deb ... Unpacking libfont-ttf-perl (1.06-2) ... Selecting previously unselected package libio-html-perl. Preparing to unpack .../108-libio-html-perl_1.004-3_all.deb ... Unpacking libio-html-perl (1.004-3) ... Selecting previously unselected package liblwp-mediatypes-perl. Preparing to unpack .../109-liblwp-mediatypes-perl_6.04-2_all.deb ... Unpacking liblwp-mediatypes-perl (6.04-2) ... Selecting previously unselected package libhttp-message-perl. Preparing to unpack .../110-libhttp-message-perl_7.02-1_all.deb ... Unpacking libhttp-message-perl (7.02-1) ... Selecting previously unselected package libhtml-form-perl. Preparing to unpack .../111-libhtml-form-perl_6.13-1_all.deb ... Unpacking libhtml-form-perl (6.13-1) ... Selecting previously unselected package libhtml-html5-entities-perl. Preparing to unpack .../112-libhtml-html5-entities-perl_0.004-3_all.deb ... Unpacking libhtml-html5-entities-perl (0.004-3) ... Selecting previously unselected package libhtml-tree-perl. Preparing to unpack .../113-libhtml-tree-perl_5.07-3_all.deb ... Unpacking libhtml-tree-perl (5.07-3) ... Selecting previously unselected package libhttp-cookies-perl. Preparing to unpack .../114-libhttp-cookies-perl_6.11-1_all.deb ... Unpacking libhttp-cookies-perl (6.11-1) ... Selecting previously unselected package libhttp-negotiate-perl. Preparing to unpack .../115-libhttp-negotiate-perl_6.01-2_all.deb ... Unpacking libhttp-negotiate-perl (6.01-2) ... Selecting previously unselected package perl-openssl-defaults:arm64. Preparing to unpack .../116-perl-openssl-defaults_7+b2_arm64.deb ... Unpacking perl-openssl-defaults:arm64 (7+b2) ... Selecting previously unselected package libnet-ssleay-perl:arm64. Preparing to unpack .../117-libnet-ssleay-perl_1.96-1_arm64.deb ... Unpacking libnet-ssleay-perl:arm64 (1.96-1) ... Selecting previously unselected package libio-socket-ssl-perl. Preparing to unpack .../118-libio-socket-ssl-perl_2.098-1_all.deb ... Unpacking libio-socket-ssl-perl (2.098-1) ... Selecting previously unselected package libnet-http-perl. Preparing to unpack .../119-libnet-http-perl_6.24-1_all.deb ... Unpacking libnet-http-perl (6.24-1) ... Selecting previously unselected package liblwp-protocol-https-perl. Preparing to unpack .../120-liblwp-protocol-https-perl_6.15-1_all.deb ... Unpacking liblwp-protocol-https-perl (6.15-1) ... Selecting previously unselected package libwww-robotrules-perl. Preparing to unpack .../121-libwww-robotrules-perl_6.03-1_all.deb ... Unpacking libwww-robotrules-perl (6.03-1) ... Selecting previously unselected package libwww-perl. Preparing to unpack .../122-libwww-perl_6.83-1_all.deb ... Unpacking libwww-perl (6.83-1) ... Selecting previously unselected package libhtml-tokeparser-simple-perl. Preparing to unpack .../123-libhtml-tokeparser-simple-perl_3.16-4_all.deb ... Unpacking libhtml-tokeparser-simple-perl (3.16-4) ... Selecting previously unselected package libimport-into-perl. Preparing to unpack .../124-libimport-into-perl_1.002005-2_all.deb ... Unpacking libimport-into-perl (1.002005-2) ... Selecting previously unselected package libio-interactive-perl. Preparing to unpack .../125-libio-interactive-perl_1.027-1_all.deb ... Unpacking libio-interactive-perl (1.027-1) ... Selecting previously unselected package libipc-run3-perl. Preparing to unpack .../126-libipc-run3-perl_0.049-1_all.deb ... Unpacking libipc-run3-perl (0.049-1) ... Selecting previously unselected package libjson-maybexs-perl. Preparing to unpack .../127-libjson-maybexs-perl_1.004008-1_all.deb ... Unpacking libjson-maybexs-perl (1.004008-1) ... Selecting previously unselected package liblist-compare-perl. Preparing to unpack .../128-liblist-compare-perl_0.55-2_all.deb ... Unpacking liblist-compare-perl (0.55-2) ... Selecting previously unselected package liblist-someutils-perl. Preparing to unpack .../129-liblist-someutils-perl_0.59-1_all.deb ... Unpacking liblist-someutils-perl (0.59-1) ... Selecting previously unselected package liblist-utilsby-perl. Preparing to unpack .../130-liblist-utilsby-perl_0.12-2_all.deb ... Unpacking liblist-utilsby-perl (0.12-2) ... Selecting previously unselected package liblz1:arm64. Preparing to unpack .../131-liblz1_1.16-1_arm64.deb ... Unpacking liblz1:arm64 (1.16-1) ... Selecting previously unselected package liblzo2-2:arm64. Preparing to unpack .../132-liblzo2-2_2.10-3+b2_arm64.deb ... Unpacking liblzo2-2:arm64 (2.10-3+b2) ... Selecting previously unselected package libmarkdown2:arm64. Preparing to unpack .../133-libmarkdown2_2.2.7-2.1+b2_arm64.deb ... Unpacking libmarkdown2:arm64 (2.2.7-2.1+b2) ... Selecting previously unselected package libmldbm-perl. Preparing to unpack .../134-libmldbm-perl_2.05-4_all.deb ... Unpacking libmldbm-perl (2.05-4) ... Selecting previously unselected package librole-tiny-perl. Preparing to unpack .../135-librole-tiny-perl_2.002005-1_all.deb ... Unpacking librole-tiny-perl (2.002005-1) ... Selecting previously unselected package libsub-quote-perl. Preparing to unpack .../136-libsub-quote-perl_2.006009-1_all.deb ... Unpacking libsub-quote-perl (2.006009-1) ... Selecting previously unselected package libmoo-perl. Preparing to unpack .../137-libmoo-perl_2.005005-1_all.deb ... Unpacking libmoo-perl (2.005005-1) ... Selecting previously unselected package libstrictures-perl. Preparing to unpack .../138-libstrictures-perl_2.000006-1_all.deb ... Unpacking libstrictures-perl (2.000006-1) ... Selecting previously unselected package libmoox-aliases-perl. Preparing to unpack .../139-libmoox-aliases-perl_0.001006-3_all.deb ... Unpacking libmoox-aliases-perl (0.001006-3) ... Selecting previously unselected package libmouse-perl:arm64. Preparing to unpack .../140-libmouse-perl_2.6.2-1_arm64.deb ... Unpacking libmouse-perl:arm64 (2.6.2-1) ... Selecting previously unselected package libpackage-stash-perl. Preparing to unpack .../141-libpackage-stash-perl_0.40-1_all.deb ... Unpacking libpackage-stash-perl (0.40-1) ... Selecting previously unselected package libsub-identify-perl. Preparing to unpack .../142-libsub-identify-perl_0.14-4_arm64.deb ... Unpacking libsub-identify-perl (0.14-4) ... Selecting previously unselected package libsub-name-perl:arm64. Preparing to unpack .../143-libsub-name-perl_0.28-1+b2_arm64.deb ... Unpacking libsub-name-perl:arm64 (0.28-1+b2) ... Selecting previously unselected package libnamespace-clean-perl. Preparing to unpack .../144-libnamespace-clean-perl_0.27-2_all.deb ... Unpacking libnamespace-clean-perl (0.27-2) ... Selecting previously unselected package libpath-tiny-perl. Preparing to unpack .../145-libpath-tiny-perl_0.150-1_all.deb ... Unpacking libpath-tiny-perl (0.150-1) ... Selecting previously unselected package libperlio-gzip-perl. Preparing to unpack .../146-libperlio-gzip-perl_0.20-1+b5_arm64.deb ... Unpacking libperlio-gzip-perl (0.20-1+b5) ... Selecting previously unselected package libperlio-utf8-strict-perl. Preparing to unpack .../147-libperlio-utf8-strict-perl_0.010-1+b4_arm64.deb ... Unpacking libperlio-utf8-strict-perl (0.010-1+b4) ... Selecting previously unselected package libproc-processtable-perl:arm64. Preparing to unpack .../148-libproc-processtable-perl_0.637-1+b2_arm64.deb ... Unpacking libproc-processtable-perl:arm64 (0.637-1+b2) ... Selecting previously unselected package libregexp-wildcards-perl. Preparing to unpack .../149-libregexp-wildcards-perl_1.05-3_all.deb ... Unpacking libregexp-wildcards-perl (1.05-3) ... Selecting previously unselected package libsereal-decoder-perl. Preparing to unpack .../150-libsereal-decoder-perl_5.006+ds-1_arm64.deb ... Unpacking libsereal-decoder-perl (5.006+ds-1) ... Selecting previously unselected package libsereal-encoder-perl. Preparing to unpack .../151-libsereal-encoder-perl_5.006+ds-1_arm64.deb ... Unpacking libsereal-encoder-perl (5.006+ds-1) ... Selecting previously unselected package libsort-versions-perl. Preparing to unpack .../152-libsort-versions-perl_1.62-3_all.deb ... Unpacking libsort-versions-perl (1.62-3) ... Selecting previously unselected package libxs-parse-keyword-perl. Preparing to unpack .../153-libxs-parse-keyword-perl_0.49-1_arm64.deb ... Unpacking libxs-parse-keyword-perl (0.49-1) ... Selecting previously unselected package libsyntax-keyword-try-perl. Preparing to unpack .../154-libsyntax-keyword-try-perl_0.31-1_arm64.deb ... Unpacking libsyntax-keyword-try-perl (0.31-1) ... Selecting previously unselected package libterm-readkey-perl. Preparing to unpack .../155-libterm-readkey-perl_2.38-2+b5_arm64.deb ... Unpacking libterm-readkey-perl (2.38-2+b5) ... Selecting previously unselected package libtext-levenshteinxs-perl. Preparing to unpack .../156-libtext-levenshteinxs-perl_0.03-5+b5_arm64.deb ... Unpacking libtext-levenshteinxs-perl (0.03-5+b5) ... Selecting previously unselected package libtext-markdown-discount-perl. Preparing to unpack .../157-libtext-markdown-discount-perl_0.18-1+b1_arm64.deb ... Unpacking libtext-markdown-discount-perl (0.18-1+b1) ... Selecting previously unselected package libtext-xslate-perl:arm64. Preparing to unpack .../158-libtext-xslate-perl_3.5.9-2+b2_arm64.deb ... Unpacking libtext-xslate-perl:arm64 (3.5.9-2+b2) ... Selecting previously unselected package libtime-duration-perl. Preparing to unpack .../159-libtime-duration-perl_1.21-2_all.deb ... Unpacking libtime-duration-perl (1.21-2) ... Selecting previously unselected package libtime-moment-perl. Preparing to unpack .../160-libtime-moment-perl_0.46-1_arm64.deb ... Unpacking libtime-moment-perl (0.46-1) ... Selecting previously unselected package libunicode-utf8-perl. Preparing to unpack .../161-libunicode-utf8-perl_0.70-2_arm64.deb ... Unpacking libunicode-utf8-perl (0.70-2) ... Selecting previously unselected package libwww-mechanize-perl. Preparing to unpack .../162-libwww-mechanize-perl_2.21-1_all.deb ... Unpacking libwww-mechanize-perl (2.21-1) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../163-libxml-namespacesupport-perl_1.12-2_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-2) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../164-libxml-sax-base-perl_1.09-3_all.deb ... Unpacking libxml-sax-base-perl (1.09-3) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../165-libxml-sax-perl_1.02+dfsg-5_all.deb ... Unpacking libxml-sax-perl (1.02+dfsg-5) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../166-libxml-libxml-perl_2.0207+dfsg+really+2.0134-8_arm64.deb ... Unpacking libxml-libxml-perl (2.0207+dfsg+really+2.0134-8) ... Selecting previously unselected package libyaml-0-2:arm64. Preparing to unpack .../167-libyaml-0-2_0.2.5-2+b1_arm64.deb ... Unpacking libyaml-0-2:arm64 (0.2.5-2+b1) ... Selecting previously unselected package libyaml-libyaml-perl. Preparing to unpack .../168-libyaml-libyaml-perl_0.907.0+ds-1_arm64.deb ... Unpacking libyaml-libyaml-perl (0.907.0+ds-1) ... Selecting previously unselected package plzip. Preparing to unpack .../169-plzip_1.13-1_arm64.deb ... Unpacking plzip (1.13-1) ... Selecting previously unselected package lzop. Preparing to unpack .../170-lzop_1.04-2+b2_arm64.deb ... Unpacking lzop (1.04-2+b2) ... Selecting previously unselected package patchutils. Preparing to unpack .../171-patchutils_0.4.5-1_arm64.deb ... Unpacking patchutils (0.4.5-1) ... Selecting previously unselected package t1utils. Preparing to unpack .../172-t1utils_1.41-4+b2_arm64.deb ... Unpacking t1utils (1.41-4+b2) ... Selecting previously unselected package unzip. Preparing to unpack .../173-unzip_6.0-29+b1_arm64.deb ... Unpacking unzip (6.0-29+b1) ... Selecting previously unselected package lintian. Preparing to unpack .../174-lintian_2.136.2_all.deb ... Unpacking lintian (2.136.2) ... Selecting previously unselected package sbuild-build-depends-lintian-dummy:amd64. Preparing to unpack .../175-sbuild-build-depends-lintian-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-lintian-dummy:amd64 (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.43) ... Setting up liblz1:arm64 (1.16-1) ... Setting up libberkeleydb-perl:arm64 (0.66-2+b1) ... Setting up plzip (1.13-1) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libtext-charwidth-perl:arm64 (0.04-12) ... Setting up libnpth0t64:arm64 (1.8-3+b2) ... Setting up libkeyutils1:arm64 (1.6.3-6+b2) ... Setting up libunicode-utf8-perl (0.70-2) ... Setting up libmouse-perl:arm64 (2.6.2-1) ... Setting up libgpg-error0:arm64 (1.61-2) ... Setting up libdata-messagepack-perl (1.02-3+b1) ... Setting up libclass-inspector-perl (1.36-3) ... Setting up libdynaloader-functions-perl (0.004-2) ... Setting up libtext-glob-perl (0.11-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:arm64 (0.50-1) ... Setting up libyaml-0-2:arm64 (0.2.5-2+b1) ... Setting up libsub-identify-perl (0.14-4) ... Setting up libcpanel-json-xs-perl:arm64 (4.42-1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdevel-size-perl (0.87-1) ... Setting up unzip (6.0-29+b1) ... Setting up libbrotli1:arm64 (1.2.0-3) ... Setting up libsqlite3-0:arm64 (3.53.2-1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.907.0+ds-1) ... Setting up libio-interactive-perl (1.027-1) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up libnghttp2-14:arm64 (1.69.0-1) ... Setting up perl-openssl-defaults:arm64 (7+b2) ... Setting up libmldbm-perl (2.05-4) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up libgcrypt20:arm64 (1.12.2-1) ... Setting up liblzo2-2:arm64 (2.10-3+b2) ... Setting up libtime-moment-perl (0.46-1) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libidn2-0:arm64 (2.3.8-5) ... Setting up libcom-err2:arm64 (1.47.4-1) ... Setting up libconfig-tiny-perl (2.30-1) ... Setting up libsereal-encoder-perl (5.006+ds-1) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up libtext-wrapi18n-perl (0.06-11) ... Setting up libnet-netmask-perl (2.0003-1) ... Setting up libsub-install-perl (0.929-1) ... Setting up libfyaml0:arm64 (0.9.4-1) ... Setting up libkrb5support0:arm64 (1.22.1-3) ... Setting up libnumber-compare-perl (0.03-3) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-11) ... Setting up patchutils (0.4.5-1) ... Setting up libjson-maybexs-perl (1.004008-1) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2+b6) ... Setting up libclass-data-inheritable-perl (0.10-1) ... Setting up libfile-find-rule-perl (0.35-1) ... Setting up libipc-system-simple-perl (1.30-2) ... Setting up libnet-domain-tld-perl (1.75-4) ... Setting up libperlio-utf8-strict-perl (0.010-1+b4) ... Setting up t1utils (1.41-4+b2) ... Setting up diffstat (1.69-1) ... Setting up libproc2-0:arm64 (2:4.0.4-9+b2) ... Setting up libvariable-magic-perl (0.64-1+b2) ... Setting up libio-html-perl (1.004-3) ... Setting up libb-hooks-op-check-perl:arm64 (0.22-3+b4) ... Setting up libfile-libmagic-perl (1.23-2+b3) ... Setting up libncursesw6:arm64 (6.6+20251231-1+b1) ... Setting up libk5crypto3:arm64 (1.22.1-3) ... Setting up libparams-util-perl (1.102-3+b2) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-11) ... Setting up libtime-duration-perl (1.21-2) ... Setting up libtext-xslate-perl:arm64 (3.5.9-2+b2) ... Setting up libnghttp3-9:arm64 (1.15.0-1) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up libcapture-tiny-perl (0.50-1) ... Setting up libtimedate-perl (2.3500-1) ... Setting up libsub-name-perl:arm64 (0.28-1+b2) ... Setting up libffi8:arm64 (3.5.2-4) ... Setting up libdata-validate-domain-perl (0.15-1) ... Setting up libproc-processtable-perl:arm64 (0.637-1+b2) ... Setting up libpath-tiny-perl (0.150-1) ... Setting up lzop (1.04-2+b2) ... Setting up libassuan9:arm64 (3.0.2-2+b2) ... Setting up procps (2:4.0.4-9+b2) ... Setting up librole-tiny-perl (2.002005-1) ... Setting up libtasn1-6:arm64 (4.21.0-2+b1) ... Setting up libipc-run3-perl (0.049-1) ... Setting up libregexp-wildcards-perl (1.05-3) ... Setting up libfile-sharedir-perl (1.118-3) ... Setting up libaliased-perl (0.34-3) ... Setting up netbase (6.5) ... Setting up libngtcp2-16:arm64 (1.22.1-1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006009-1) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libclass-xsaccessor-perl (1.19-4+b6) ... Setting up libkrb5-3:arm64 (1.22.1-3) ... Setting up libstemmer0d:arm64 (3.1.1-1) ... Setting up libsort-versions-perl (1.62-3) ... Setting up libssh2-1t64:arm64 (1.11.1-3) ... Setting up libterm-readkey-perl (2.38-2+b5) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.6.3-1) ... Setting up libtext-levenshteinxs-perl (0.03-5+b5) ... Setting up libperlio-gzip-perl (0.20-1+b5) ... Setting up readline-common (8.3-4) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.006+ds-1) ... Setting up libmarkdown2:arm64 (2.2.7-2.1+b2) ... Setting up libldap2:arm64 (2.6.10+dfsg-1+b2) ... Setting up liburi-perl (5.35-1) ... Setting up iso-codes (4.20.1-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b5) ... Setting up libnet-ssleay-perl:arm64 (1.96-1) ... Setting up libksba8:arm64 (1.8.0-3) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libpsl5t64:arm64 (0.21.5-1) ... Setting up libnet-http-perl (6.24-1) ... Setting up libtext-markdown-discount-perl (0.18-1+b1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:arm64 (0.009-3) ... Setting up ca-certificates (20260601) ... Updating certificates in /etc/ssl/certs... 121 added, 0 removed; done. Setting up libglib2.0-0t64:arm64 (2.88.1-2) ... No schema files found: doing nothing. Setting up libdata-validate-uri-perl (0.07-3) ... Setting up libxs-parse-keyword-perl (0.49-1) ... Setting up shared-mime-info (2.4-5+b4) ... Setting up libp11-kit0:arm64 (0.26.2-3) ... Setting up libgssapi-krb5-2:arm64 (1.22.1-3) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up ucf (3.0053) ... Setting up libreadline8t64:arm64 (8.3-4) ... Setting up libwww-robotrules-perl (6.03-1) ... Setting up libsyntax-keyword-try-perl (0.31-1) ... Setting up libhtml-parser-perl:arm64 (3.83-2) ... Setting up gpgconf (2.4.9-4) ... Setting up libio-socket-ssl-perl (2.098-1) ... Setting up gpg (2.4.9-4) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (7.02-1) ... Setting up libhtml-form-perl (6.13-1) ... Setting up libgnutls30t64:arm64 (3.8.13-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libxmlb2:arm64 (0.3.24-2+b1) ... Setting up libparams-classify-perl:arm64 (0.015-2+b5) ... Setting up libcgi-pm-perl (4.72-1) ... Setting up libxml-sax-perl (1.02+dfsg-5) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libmodule-runtime-perl (0.018-1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-8) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.60-1) ... Setting up libngtcp2-crypto-gnutls8:arm64 (1.22.1-1) ... Setting up libcurl4-gnutls:arm64 (8.21.0~rc3-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libappstream5:arm64 (1.1.3-1) ... Setting up appstream (1.1.3-1) ... ✔ Metadata cache was updated successfully. Setting up libmoox-aliases-perl (0.001006-3) ... Setting up libb-hooks-endofscope-perl (0.28-2) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up liblwp-protocol-https-perl (6.15-1) ... Setting up libwww-perl (6.83-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.21-1) ... Setting up lintian (2.136.2) ... Setting up sbuild-build-depends-lintian-dummy:amd64 (0.invalid.0) ... Processing triggers for libc-bin (2.42-17) ... Processing triggers for man-db (2.13.1-1+b1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20260601) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build Sat, 20 Jun 2026 18:15:29 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Sat, 20 Jun 2026 18:15:29 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Sat, 20 Jun 2026 18:15:33 +0000 | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Build-Space: n/a Build-Time: 2825 Distribution: unstable Foreign Architectures: amd64 Host Architecture: amd64 Install-Time: 62 Job: mira_4.9.6-12 Lintian: pass Machine Architecture: arm64 Package: mira Package-Time: 2953 Source-Version: 4.9.6-12 Space: n/a Status: successful Version: 4.9.6-12 -------------------------------------------------------------------------------- Finished at 2026-06-20T18:14:11Z Build needed 00:49:13, no disk space