sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | mptp 0.2.4-1 (armhf) Tue, 12 Nov 2019 02:33:06 +0000 | +==============================================================================+ Package: mptp Version: 0.2.4-1 Source Version: 0.2.4-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-99c71abd-7dd1-4e97-b9ea-e93ca506d272' with '<>' I: NOTICE: Log filtering will replace 'build/mptp-sLxxlD/resolver-T0EPrG' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [139 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-11-11-0825.46.pdiff [8691 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-11-11-1416.22.pdiff [44.9 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2019-11-11-2015.18.pdiff [19.6 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-11-11-0825.46.pdiff [9103 B] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2019-11-11-2015.18.pdiff [19.6 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-11-11-1416.22.pdiff [45.2 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-11-11-2015.18.pdiff [11.8 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main armhf Packages [7990 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-11-11-2015.18.pdiff [11.8 kB] Fetched 8324 kB in 2s (4154 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: libsystemd0 libudev1 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 507 kB of archives. After this operation, 5120 B of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 libsystemd0 amd64 243-5 [346 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libudev1 amd64 243-5 [161 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 507 kB in 0s (9314 kB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14997 files and directories currently installed.) Preparing to unpack .../libsystemd0_243-5_amd64.deb ... Unpacking libsystemd0:amd64 (243-5) over (242-8) ... Setting up libsystemd0:amd64 (243-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14997 files and directories currently installed.) Preparing to unpack .../libudev1_243-5_amd64.deb ... Unpacking libudev1:amd64 (243-5) over (242-8) ... Setting up libudev1:amd64 (243-5) ... Processing triggers for libc-bin (2.29-3) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'mptp' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/mptp.git Please use: git clone https://salsa.debian.org/med-team/mptp.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 89.7 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main mptp 0.2.4-1 (dsc) [1940 B] Get:2 http://debian.oregonstate.edu/debian unstable/main mptp 0.2.4-1 (tar) [74.3 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main mptp 0.2.4-1 (diff) [13.5 kB] Fetched 89.7 kB in 0s (0 B/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/mptp-sLxxlD/mptp-0.2.4' with '<>' I: NOTICE: Log filtering will replace 'build/mptp-sLxxlD' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 11~), bison, flex, libgsl-dev, pkg-config, bash-completion, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf Filtered Build-Depends: debhelper (>= 11~), bison, flex, libgsl-dev, pkg-config, bash-completion, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [436 B] Get:5 copy:/<>/apt_archive ./ Packages [526 B] Fetched 1919 B in 0s (143 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bash-completion binutils-arm-linux-gnueabihf bison bsdmainutils cpp-9-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file flex g++-9-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-9-arm-linux-gnueabihf gcc-9-arm-linux-gnueabihf-base gcc-9-base:armhf gcc-9-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libasan5-armhf-cross libatomic1:armhf libatomic1-armhf-cross libbsd0 libc6:armhf libc6-armhf-cross libc6-dev:armhf libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:armhf libgcc-9-dev-armhf-cross libgcc1:armhf libgcc1-armhf-cross libglib2.0-0 libgomp1:armhf libgomp1-armhf-cross libgsl-dev:armhf libgsl23:armhf libgslcblas0:armhf libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libpipeline1 libsigsegv2 libstdc++-9-dev:armhf libstdc++-9-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db pkg-config po-debconf sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc bison-doc wamerican | wordlist whois vacation gcc-9-locales cpp-doc dh-make binutils-multiarch flex-doc gcc-9-doc libstdc++6-9-dbg-armhf-cross libgcc1-dbg-armhf-cross libgomp1-dbg-armhf-cross libitm1-dbg-armhf-cross libatomic1-dbg-armhf-cross libasan5-dbg-armhf-cross liblsan0-dbg-armhf-cross libtsan0-dbg-armhf-cross libubsan1-dbg-armhf-cross libquadmath0-dbg-armhf-cross manpages-dev gdb-arm-linux-gnueabihf gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armhf libc-l10n:armhf locales:armhf manpages-dev:armhf gsl-ref-psdoc:armhf | gsl-doc-pdf:armhf | gsl-doc-info:armhf | gsl-ref-html:armhf libstdc++-9-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: libfl-dev curl | wget | lynx libidn2-0:armhf libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpm2 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bash-completion binutils-arm-linux-gnueabihf bison bsdmainutils cpp-9-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file flex g++-9-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-9-arm-linux-gnueabihf gcc-9-arm-linux-gnueabihf-base gcc-9-base:armhf gcc-9-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libasan5-armhf-cross libatomic1:armhf libatomic1-armhf-cross libbsd0 libc6:armhf libc6-armhf-cross libc6-dev:armhf libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:armhf libgcc-9-dev-armhf-cross libgcc1:armhf libgcc1-armhf-cross libglib2.0-0 libgomp1:armhf libgomp1-armhf-cross libgsl-dev:armhf libgsl23:armhf libgslcblas0:armhf libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libpipeline1 libsigsegv2 libstdc++-9-dev:armhf libstdc++-9-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db pkg-config po-debconf sbuild-build-depends-main-dummy:armhf sensible-utils ucf 0 upgraded, 92 newly installed, 0 to remove and 0 not upgraded. Need to get 65.2 MB of archives. After this operation, 251 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [952 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.0-1 [1307 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 flex amd64 2.6.4-6.2 [456 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main armhf gcc-9-base armhf 9.2.1-19 [194 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 bash-completion all 1:2.9-1 [224 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.37-6 [253 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.37-6 [119 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.37-6 [67.2 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabihf amd64 2.33.1-2 [2721 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 bison amd64 2:3.4.2+dfsg-1 [911 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-arm-linux-gnueabihf-base amd64 9.2.1-19cross1 [194 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-arm-linux-gnueabihf amd64 9.2.1-19cross1 [6813 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabihf amd64 4:9.2.1-3.1 [16.7 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base all 9.2.1-19cross1 [190 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armhf-cross all 2.29-1cross7 [1122 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-armhf-cross all 1:9.2.1-19cross1 [37.3 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armhf-cross all 9.2.1-19cross1 [73.2 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armhf-cross all 9.2.1-19cross1 [6692 B] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-armhf-cross all 9.2.1-19cross1 [362 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armhf-cross all 9.2.1-19cross1 [392 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armhf-cross all 9.2.1-19cross1 [112 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-armhf-cross all 9.2.1-19cross1 [662 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-arm-linux-gnueabihf amd64 9.2.1-19cross1 [7156 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabihf amd64 4:9.2.1-3.1 [1476 B] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armhf-cross all 5.2.9-2cross7 [1312 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armhf-cross all 2.29-1cross7 [2122 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-armhf-cross all 9.2.1-19cross1 [1720 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-arm-linux-gnueabihf amd64 9.2.1-19cross1 [7391 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabihf amd64 4:9.2.1-3.1 [1184 B] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-2 [8301 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1+b1 [344 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.29-1 [67.4 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armhf all 12.8 [6644 B] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-11 [547 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 12.7.1 [173 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.67-1 [104 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.6.2-1 [23.6 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.6.2-1 [14.6 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-2 [145 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.62.2-3 [1318 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20191019-1 [102 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.7.1 [997 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main armhf libgcc1 armhf 1:9.2.1-19 [37.3 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main armhf libc6 armhf 2.29-3 [2340 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main armhf libasan5 armhf 9.2.1-19 [369 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main armhf libatomic1 armhf 9.2.1-19 [6860 B] Get:82 http://debian.oregonstate.edu/debian unstable/main armhf linux-libc-dev armhf 5.3.9-1 [985 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main armhf libc6-dev armhf 2.29-3 [2141 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main armhf libgomp1 armhf 9.2.1-19 [75.2 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++6 armhf 9.2.1-19 [431 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main armhf libubsan1 armhf 9.2.1-19 [113 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-9-dev armhf 9.2.1-19 [663 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main armhf libgslcblas0 armhf 2.5+dfsg-6+b1 [79.4 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main armhf libgsl23 armhf 2.5+dfsg-6+b1 [718 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main armhf libgsl-dev armhf 2.5+dfsg-6+b1 [903 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++-9-dev armhf 9.2.1-19 [1751 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 pkg-config amd64 0.29-6 [63.5 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 65.2 MB in 1s (81.3 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 14997 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.9.0-1_amd64.deb ... Unpacking man-db (2.9.0-1) ... Selecting previously unselected package libsigsegv2:amd64. 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Unpacking sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up libfile-which-perl (1.23-1) ... Setting up libc6-armhf-cross (2.29-1cross7) ... Setting up libmagic-mgc (1:5.37-6) ... Setting up libarchive-zip-perl (1.67-1) ... Setting up libglib2.0-0:amd64 (2.62.2-3) ... No schema files found: doing nothing. Setting up libdebhelper-perl (12.7.1) ... Setting up libmagic1:amd64 (1:5.37-6) ... Setting up linux-libc-dev:armhf (5.3.9-1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.37-6) ... Setting up libyaml-perl (1.29-1) ... Setting up libicu63:amd64 (63.2-2) ... Setting up gcc-9-arm-linux-gnueabihf-base:amd64 (9.2.1-19cross1) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3) ... Setting up bash-completion (1:2.9-1) ... Setting up libncurses6:amd64 (6.1+20191019-1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up linux-libc-dev-armhf-cross (5.2.9-2cross7) ... Setting up autopoint (0.19.8.1-9) ... Setting up pkg-config (0.29-6) ... Setting up gcc-9-cross-base (9.2.1-19cross1) ... Setting up sensible-utils (0.0.12) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up binutils-arm-linux-gnueabihf (2.33.1-2) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up gcc-9-base:armhf (9.2.1-19) ... Setting up libgomp1-armhf-cross (9.2.1-19cross1) ... Setting up libfile-stripnondeterminism-perl (1.6.2-1) ... Setting up libtool (2.4.6-11) ... Setting up cpp-9-arm-linux-gnueabihf (9.2.1-19cross1) ... Setting up libc6-dev-armhf-cross (2.29-1cross7) ... Setting up m4 (1.4.18-4) ... Setting up libatomic1-armhf-cross (9.2.1-19cross1) ... Setting up libgcc1-armhf-cross (1:9.2.1-19cross1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0038+nmu1) ... Setting up autoconf (2.69-11) ... Setting up dh-strip-nondeterminism (1.6.2-1) ... Setting up dwz (0.13-2) ... Setting up groff-base (1.22.4-3) ... Setting up bison (2:3.4.2+dfsg-1) ... update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode Setting up cpp-arm-linux-gnueabihf (4:9.2.1-3.1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up flex (2.6.4-6.2) ... Setting up gettext (0.19.8.1-9) ... Setting up man-db (2.9.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libasan5-armhf-cross (9.2.1-19cross1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libstdc++6-armhf-cross (9.2.1-19cross1) ... Setting up libubsan1-armhf-cross (9.2.1-19cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-9-dev-armhf-cross (9.2.1-19cross1) ... Setting up po-debconf (1.0.21) ... Setting up libxml-simple-perl (2.25-1) ... Setting up gcc-9-arm-linux-gnueabihf (9.2.1-19cross1) ... Setting up libstdc++-9-dev-armhf-cross (9.2.1-19cross1) ... Setting up gcc-arm-linux-gnueabihf (4:9.2.1-3.1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up g++-9-arm-linux-gnueabihf (9.2.1-19cross1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up g++-arm-linux-gnueabihf (4:9.2.1-3.1) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-armhf (12.8) ... Setting up libgcc1:armhf (1:9.2.1-19) ... Setting up dh-autoreconf (19) ... Setting up libc6:armhf (2.29-3) ... Setting up libc6-dev:armhf (2.29-3) ... Setting up libstdc++6:armhf (9.2.1-19) ... Setting up libgslcblas0:armhf (2.5+dfsg-6+b1) ... Setting up debhelper (12.7.1) ... Setting up libgomp1:armhf (9.2.1-19) ... Setting up libasan5:armhf (9.2.1-19) ... Setting up libgsl23:armhf (2.5+dfsg-6+b1) ... Setting up libatomic1:armhf (9.2.1-19) ... Setting up libubsan1:armhf (9.2.1-19) ... Setting up libgsl-dev:armhf (2.5+dfsg-6+b1) ... Setting up libgcc-9-dev:armhf (9.2.1-19) ... Setting up libstdc++-9-dev:armhf (9.2.1-19) ... Setting up sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.29-3) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 #1 SMP Debian 4.9.144-3.1 (2019-02-19) amd64 (x86_64) Toolchain package versions: binutils_2.33.1-2 dpkg-dev_1.19.7 g++-8_8.3.0-24 g++-9_9.2.1-19 gcc-8_8.3.0-24 gcc-9_9.2.1-19 libc6-dev_2.29-3 libstdc++-8-dev_8.3.0-24 libstdc++-9-dev_9.2.1-19 libstdc++-9-dev-armhf-cross_9.2.1-19cross1 libstdc++6_9.2.1-19 libstdc++6-armhf-cross_9.2.1-19cross1 linux-libc-dev_5.3.9-1 Package versions: adduser_3.118 apt_1.8.4 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.46 bash_5.0-5 bash-completion_1:2.9-1 binutils_2.33.1-2 binutils-arm-linux-gnueabihf_2.33.1-2 binutils-common_2.33.1-2 binutils-x86-64-linux-gnu_2.33.1-2 bison_2:3.4.2+dfsg-1 bsdmainutils_11.1.2+b1 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 coreutils_8.30-3+b1 cpp_4:9.2.1-3.1 cpp-8_8.3.0-24 cpp-9_9.2.1-19 cpp-9-arm-linux-gnueabihf_9.2.1-19cross1 cpp-arm-linux-gnueabihf_4:9.2.1-3.1 cross-config_2.6.15-3 crossbuild-essential-armhf_12.8 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.7.1 debian-archive-keyring_2019.1 debianutils_4.9 dh-autoreconf_19 dh-strip-nondeterminism_1.6.2-1 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.13-2 e2fsprogs_1.45.4-1 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.37-6 findutils_4.7.0-1 flex_2.6.4-6.2 g++_4:9.2.1-3.1 g++-8_8.3.0-24 g++-9_9.2.1-19 g++-9-arm-linux-gnueabihf_9.2.1-19cross1 g++-arm-linux-gnueabihf_4:9.2.1-3.1 gcc_4:9.2.1-3.1 gcc-8_8.3.0-24 gcc-8-base_8.3.0-24 gcc-9_9.2.1-19 gcc-9-arm-linux-gnueabihf_9.2.1-19cross1 gcc-9-arm-linux-gnueabihf-base_9.2.1-19cross1 gcc-9-base_9.2.1-19 gcc-9-cross-base_9.2.1-19cross1 gcc-arm-linux-gnueabihf_4:9.2.1-3.1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.17-3 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3+b1 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-5 libapt-pkg5.0_1.8.4 libarchive-zip-perl_1.67-1 libasan5_9.2.1-19 libasan5-armhf-cross_9.2.1-19cross1 libatomic1_9.2.1-19 libatomic1-armhf-cross_9.2.1-19cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2 libbinutils_2.33.1-2 libblkid1_2.34-0.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.29-3 libc-dev-bin_2.29-3 libc6_2.29-3 libc6-armhf-cross_2.29-1cross7 libc6-dev_2.29-3 libc6-dev-armhf-cross_2.29-1cross7 libcap-ng0_0.7.9-2.1 libcc1-0_9.2.1-19 libcom-err2_1.45.4-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.13-1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.250 libdebhelper-perl_12.7.1 libdebian-dpkgcross-perl_2.6.15-3 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libext2fs2_1.45.4-1 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.6.2-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-24 libgcc-9-dev_9.2.1-19 libgcc-9-dev-armhf-cross_9.2.1-19cross1 libgcc1_1:9.2.1-19 libgcc1-armhf-cross_1:9.2.1-19cross1 libgcrypt20_1.8.5-3 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.62.2-3 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.10-4 libgomp1_9.2.1-19 libgomp1-armhf-cross_9.2.1-19cross1 libgpg-error0_1.36-7 libgsl-dev_2.5+dfsg-6+b1 libgsl23_2.5+dfsg-6+b1 libgslcblas0_2.5+dfsg-6+b1 libhogweed4_3.5.1+really3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libicu63_63.2-2 libidn2-0_2.2.0-2 libio-string-perl_1.08-3 libisl19_0.20-2 libisl21_0.21-2 libitm1_9.2.1-19 liblocale-gettext-perl_1.07-4 liblsan0_9.2.1-19 liblz4-1_1.9.2-1 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.37-6 libmagic1_1:5.37-6 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-24 libncurses6_6.1+20191019-1 libncursesw6_6.1+20191019-1 libnettle6_3.5.1+really3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libp11-kit0_0.23.18.1-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.32-5+b1 libpcre3_2:8.39-12+b1 libperl5.28_5.28.1-6 libperl5.30_5.30.0-9 libpipeline1_1.5.1-2 libquadmath0_9.2.1-19 libseccomp2_2.4.1-2 libselinux1_2.9-2+b2 libsemanage-common_2.9-3 libsemanage1_2.9-3 libsepol1_2.9-2+b2 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libss2_1.45.4-1 libstdc++-8-dev_8.3.0-24 libstdc++-9-dev_9.2.1-19 libstdc++-9-dev-armhf-cross_9.2.1-19cross1 libstdc++6_9.2.1-19 libstdc++6-armhf-cross_9.2.1-19cross1 libsub-override-perl_0.09-2 libsystemd0_243-5 libtasn1-6_4.14-3 libtinfo6_6.1+20191019-1 libtool_2.4.6-11 libtsan0_9.2.1-19 libubsan1_9.2.1-19 libubsan1-armhf-cross_9.2.1-19cross1 libuchardet0_0.0.6-3 libudev1_243-5 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libxml-libxml-perl_2.0134+dfsg-1+b1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-perl_1.29-1 libzstd1_1.4.3+dfsg-1 linux-libc-dev_5.3.9-1 linux-libc-dev-armhf-cross_5.2.9-2cross7 login_1:4.7-2 logsave_1.45.4-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-1 mawk_1.3.3-17+b3 mount_2.34-0.1 ncurses-base_6.1+20191019-1 ncurses-bin_6.1+20191019-1 passwd_1:4.7-2 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.0-9 pkg-config_0.29-6 po-debconf_1.0.21 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.96-1 tar_1.30+dfsg-6+b1 tzdata_2019c-3 ucf_3.0038+nmu1 util-linux_2.34-0.1 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-1+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: mptp Binary: mptp Architecture: any Version: 0.2.4-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/Pas-Kapli/mptp Standards-Version: 4.1.4 Vcs-Browser: https://salsa.debian.org/med-team/mptp Vcs-Git: https://salsa.debian.org/med-team/mptp.git Build-Depends: debhelper (>= 11~), bison, flex, libgsl-dev, pkg-config, bash-completion Package-List: mptp deb science optional arch=any Checksums-Sha1: db47df2305134fb1c92e1ab125f53405d4e2f073 74267 mptp_0.2.4.orig.tar.gz 161d5400623724161449d542d28f237710d1a71c 13536 mptp_0.2.4-1.debian.tar.xz Checksums-Sha256: 31467d9a98356679f5ee0f417fc8b6b76a0cd3743bd57a29ebff8b43c201abd6 74267 mptp_0.2.4.orig.tar.gz a312ec28486c516041c04b8c7f1b25a8914806d8e6b770198bc030402e859f0d 13536 mptp_0.2.4-1.debian.tar.xz Files: ad61961ba1b5d4ae3d05d59bce58a4b1 74267 mptp_0.2.4.orig.tar.gz 5f8401205a0da4ebe80a659017ce3541 13536 mptp_0.2.4-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlsM/fYRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtG5xA//TagTp7PsSAIEoZAQaQYSA4uoukjK2Cws Gt0kKtq3/+Md8QiPaCyHWL0uCu6mZp1vm7+UBZ9ylusZzTr0M/5fH+iA8P1EU5er g3mxb6rV9ibfvssCd2RkGM+fPlUCIA7Pe0c4ecbjf1ulsWIzMYSrjq/Qu5H5nVd3 wP9Y9pbNlbWin7F5U1KsVWN3JFBZx9H1qvFRUZ/09FjOYlectMdpdIWbiAzLbeaB yFUgq0SMkI3Uk6LzMhKSKML3rJ2ok8kfSLM3GvOm+fMHDausPmcFFCW4SV/gP1ZP hudthx/dbFZB4pwWaJG10DPal/xbmHVWmyrRldmVkBK/QvrahzcUNeeGAsQfefEc 120/BAOcpCU/fmyRVycgHhA6WlVDNi0tfJtm4dj6DfKVIee7WqFjG30+dKu81JtG LzXE41ALCPbq/a9IHcTeed2Y7h4Yk5ZwSjDCGSf7pgtMEVJi/3rr8eRd5kHfiHYD iTvb7rOg6ApW5JaQ4IoB4bZv+AaX+MBMHZQ2rVBxTSMlNlopOZVzTo1J/b6iQ8uq ZUDjVa5XOfBktDOR7QL20rNirFwJpd+Wdfw/JkiG2UVm6NwvHShIibV2nojG/FD5 4OkyB2NOwksLbSnhRz9ekC+JzywH+7RWpuIHjc/i3SvNAqhu/3+DHGi2spZi8czd 4nMVRRzn7aY= =y8YO -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Tue May 29 07:15:02 2018 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./mptp_0.2.4-1.dsc dpkg-source: info: extracting mptp in /<> dpkg-source: info: unpacking mptp_0.2.4.orig.tar.gz dpkg-source: info: unpacking mptp_0.2.4-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying disable_mtune_native.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-99c71abd-7dd1-4e97-b9ea-e93ca506d272 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarmhf -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package mptp dpkg-buildpackage: info: source version 0.2.4-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a configure.ac:15: installing './compile' configure.ac:10: installing './config.guess' configure.ac:10: installing './config.sub' configure.ac:6: installing './install-sh' configure.ac:6: installing './missing' src/Makefile.am: installing './depcomp' configure.ac: installing './ylwrap' debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- --with-bash-completions=`pkg-config --variable=completionsdir bash-completion` ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=arm-linux-gnueabihf --with-bash-completions=/usr/share/bash-completion/completions configure: WARNING: unrecognized options: --disable-maintainer-mode configure: loading site script /etc/dpkg-cross/cross-config.armhf checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for arm-linux-gnueabihf-strip... arm-linux-gnueabihf-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking build system type... x86_64-pc-linux-gnu checking host system type... arm-unknown-linux-gnueabihf ./configure: line 2936: -g: command not found checking for arm-linux-gnueabihf-gcc... arm-linux-gnueabihf-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether arm-linux-gnueabihf-gcc accepts -g... yes checking for arm-linux-gnueabihf-gcc option to accept ISO C89... none needed checking whether arm-linux-gnueabihf-gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of arm-linux-gnueabihf-gcc... none checking for arm-linux-gnueabihf-ranlib... arm-linux-gnueabihf-ranlib checking for a sed that does not truncate output... /bin/sed checking for flex... flex checking lex output file root... lex.yy checking lex library... none needed checking whether yytext is a pointer... no checking for bison... bison -y checking how to run the C preprocessor... arm-linux-gnueabihf-gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking assert.h usability... yes checking assert.h presence... yes checking for assert.h... yes checking stdio.h usability... yes checking stdio.h presence... yes checking for stdio.h... yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking for string.h... (cached) yes checking getopt.h usability... yes checking getopt.h presence... yes checking for getopt.h... yes checking for stdlib.h... (cached) yes checking regex.h usability... yes checking regex.h presence... yes checking for regex.h... yes checking ctype.h usability... yes checking ctype.h presence... yes checking for ctype.h... yes checking locale.h usability... yes checking locale.h presence... yes checking for locale.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking for string.h... (cached) yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for inline... inline checking for size_t... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... (cached) yes checking for working strtod... no checking for pow... no checking for pow in -lm... yes checking for working alloca.h... yes checking for alloca... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... (cached) yes checking for memmove... yes checking for memcpy... yes checking for gettimeofday... yes checking for memchr... yes checking for memset... yes checking for pow... (cached) no checking for regcomp... yes checking for strcasecmp... yes checking for strchr... yes checking for strcspn... yes checking for sysinfo... yes checking for cos in -lm... yes checking for cblas_dgemm in -lgslcblas... yes checking for gsl_cdf_chisq_P in -lgsl... yes checking for ps2pdf... no configure: WARNING: *** ps2pdf is required to build a PDF version of the manual checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating man/Makefile config.status: creating completion/Makefile config.status: creating config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --disable-maintainer-mode mptp 0.2.4 Target: linux-gnueabihf arm Compiler: arm-linux-gnueabihf-gcc CFLAGS: -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 LIBS: -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now Continue with 'make' command make[1]: Leaving directory '/<>' debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build override_dh_auto_build --no-parallel make -j1 make[2]: Entering directory '/<>' make all-recursive make[3]: Entering directory '/<>' Making all in src make[4]: Entering directory '/<>/src' arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o arch.o arch.c arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o auto.o auto.c arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o aic.o aic.c arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mptp.o mptp.c arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o dp.o dp.c arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fasta.o fasta.c arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o likelihood.o likelihood.c arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o maps.o maps.c arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o multirun.o multirun.c arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o output.o output.c arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o random.o random.c arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o rtree.o rtree.c arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o svg.o svg.c arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o svg_landscape.o svg_landscape.c arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o util.o util.c arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utree.o utree.c utree.c: In function ‘utree_lca’: utree.c:557:17: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘unsigned int’ [-Wsign-compare] 557 | for (i = 0; i < count; ++i) | ^ arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o hash.o hash.c hash.c: In function ‘hash_fnv’: hash.c:40:24: warning: conversion from ‘long long unsigned int’ to ‘long unsigned int’ changes value from ‘14695981039346656037’ to ‘2216829733’ [-Woverflow] 40 | unsigned long hash = 14695981039346656037UL; | ^~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o list.o list.c /bin/bash ../ylwrap parse_utree.y y.tab.c parse_utree.c y.tab.h `echo parse_utree.c | sed -e s/cc$/hh/ -e s/cpp$/hpp/ -e s/cxx$/hxx/ -e s/c++$/h++/ -e s/c$/h/` y.output parse_utree.output -- bison -y -d -p `/bin/sed -n 's/.*_\(.*\)/\1_/p' <<<"parse_utree"` /<>/src/parse_utree.y:84.1-14: warning: POSIX Yacc does not support %error-verbose [-Wyacc] 84 | %error-verbose | ^~~~~~~~~~~~~~ /<>/src/parse_utree.y:84.1-14: warning: deprecated directive, use ‘%define parse.error verbose’ [-Wdeprecated] 84 | %error-verbose | ^~~~~~~~~~~~~~ /<>/src/parse_utree.y:86.1-11: warning: POSIX Yacc does not support %destructor [-Wyacc] 86 | %destructor { utree_destroy($$); } subtree | ^~~~~~~~~~~ /<>/src/parse_utree.y: warning: fix-its can be applied. Rerun with option '--update'. [-Wother] updating parse_utree.h arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o parse_utree.o parse_utree.c /bin/bash ../ylwrap lex_utree.l lex.yy.c lex_utree.c -- flex -o lex.yy.c arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o lex_utree.o lex_utree.c rm -f libparse_utree.a ar cru libparse_utree.a parse_utree.o lex_utree.o ar: `u' modifier ignored since `D' is the default (see `U') arm-linux-gnueabihf-ranlib libparse_utree.a /bin/bash ../ylwrap parse_rtree.y y.tab.c parse_rtree.c y.tab.h `echo parse_rtree.c | sed -e s/cc$/hh/ -e s/cpp$/hpp/ -e s/cxx$/hxx/ -e s/c++$/h++/ -e s/c$/h/` y.output parse_rtree.output -- bison -y -d -p `/bin/sed -n 's/.*_\(.*\)/\1_/p' <<<"parse_rtree"` /<>/src/parse_rtree.y:56.1-14: warning: POSIX Yacc does not support %error-verbose [-Wyacc] 56 | %error-verbose | ^~~~~~~~~~~~~~ /<>/src/parse_rtree.y:56.1-14: warning: deprecated directive, use ‘%define parse.error verbose’ [-Wdeprecated] 56 | %error-verbose | ^~~~~~~~~~~~~~ /<>/src/parse_rtree.y:58.1-11: warning: POSIX Yacc does not support %destructor [-Wyacc] 58 | %destructor { rtree_destroy($$); } subtree | ^~~~~~~~~~~ /<>/src/parse_rtree.y:59.1-11: warning: POSIX Yacc does not support %destructor [-Wyacc] 59 | %destructor { free($$); } STRING | ^~~~~~~~~~~ /<>/src/parse_rtree.y:60.1-11: warning: POSIX Yacc does not support %destructor [-Wyacc] 60 | %destructor { free($$); } NUMBER | ^~~~~~~~~~~ /<>/src/parse_rtree.y:61.1-11: warning: POSIX Yacc does not support %destructor [-Wyacc] 61 | %destructor { free($$); } label | ^~~~~~~~~~~ /<>/src/parse_rtree.y: warning: fix-its can be applied. Rerun with option '--update'. [-Wother] updating parse_rtree.h arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o parse_rtree.o parse_rtree.c /bin/bash ../ylwrap lex_rtree.l lex.yy.c lex_rtree.c -- flex -o lex.yy.c arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o lex_rtree.o lex_rtree.c rm -f libparse_rtree.a ar cru libparse_rtree.a parse_rtree.o lex_rtree.o ar: `u' modifier ignored since `D' is the default (see `U') arm-linux-gnueabihf-ranlib libparse_rtree.a arm-linux-gnueabihf-gcc -I. -O3 -Wall -Wsign-compare -g -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o ../bin/mptp arch.o auto.o aic.o mptp.o dp.o fasta.o likelihood.o maps.o multirun.o output.o random.o rtree.o svg.o svg_landscape.o util.o utree.o hash.o list.o libparse_utree.a libparse_rtree.a -lgsl -lgslcblas -lm make[4]: Leaving directory '/<>/src' Making all in man make[4]: Entering directory '/<>/man' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/man' Making all in completion make[4]: Entering directory '/<>/completion' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/completion' make[4]: Entering directory '/<>' make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/debian/mptp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in src make[2]: Entering directory '/<>/src' make[3]: Entering directory '/<>/src' /bin/mkdir -p '/<>/debian/mptp/usr/bin' /usr/bin/install -c ../bin/mptp '/<>/debian/mptp/usr/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' Making install in man make[2]: Entering directory '/<>/man' make[3]: Entering directory '/<>/man' make[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/debian/mptp/usr/share/man/man1' /usr/bin/install -c -m 644 mptp.1 '/<>/debian/mptp/usr/share/man/man1' make[3]: Leaving directory '/<>/man' make[2]: Leaving directory '/<>/man' Making install in completion make[2]: Entering directory '/<>/completion' make[3]: Entering directory '/<>/completion' make[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/debian/mptp/usr/share/bash-completion/completions' /usr/bin/install -c -m 644 mptp '/<>/debian/mptp/usr/share/bash-completion/completions' make[3]: Leaving directory '/<>/completion' make[2]: Leaving directory '/<>/completion' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_perl: /usr/lib/arm-linux-gnueabihf/perl/cross-config-5.30.0/Config.pm does not exist (missing build dependency on perl-xs-dev?) dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'mptp' in '../mptp_0.2.4-1_armhf.deb'. dpkg-deb: building package 'mptp-dbgsym' in '../mptp-dbgsym_0.2.4-1_armhf.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../mptp_0.2.4-1_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-11-12T02:34:06Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ mptp_0.2.4-1_armhf.changes: --------------------------- Format: 1.8 Date: Tue, 29 May 2018 08:57:20 +0200 Source: mptp Binary: mptp mptp-dbgsym Built-For-Profiles: cross nocheck Architecture: armhf Version: 0.2.4-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: mptp - single-locus species delimitation Changes: mptp (0.2.4-1) unstable; urgency=medium . * New upstream version Checksums-Sha1: ab8f80d002344b6cdf012e1eaac6032c8a83141f 119192 mptp-dbgsym_0.2.4-1_armhf.deb 62db5f4db816dd1ea2d4d61a4b604be71d30db24 4789 mptp_0.2.4-1_armhf.buildinfo fa0b4d8f0fdb29fac3b7f0d78dc9b6bdc29ccebd 56228 mptp_0.2.4-1_armhf.deb Checksums-Sha256: fabefd412003d4055885ef83793535e8be14b0973f623e7e073afc2414c26b61 119192 mptp-dbgsym_0.2.4-1_armhf.deb 1c3d5372d7e34049b8d1ccc168b876568840018717502dbb785250320519f8f8 4789 mptp_0.2.4-1_armhf.buildinfo 5bfc1995cddc12072a1647544f7dea345eb3f03ffcecfcb08852f0c7b1a58a3c 56228 mptp_0.2.4-1_armhf.deb Files: f54534544a88100c290cab89953c2c4d 119192 debug optional mptp-dbgsym_0.2.4-1_armhf.deb e221df6feeaacb0615bed87918a4550a 4789 science optional mptp_0.2.4-1_armhf.buildinfo 818ae9b95a3a4d0c0ecd5d9a5a0e8496 56228 science optional mptp_0.2.4-1_armhf.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: mptp Binary: mptp Architecture: armhf Version: 0.2.4-1 Checksums-Md5: f54534544a88100c290cab89953c2c4d 119192 mptp-dbgsym_0.2.4-1_armhf.deb 818ae9b95a3a4d0c0ecd5d9a5a0e8496 56228 mptp_0.2.4-1_armhf.deb Checksums-Sha1: ab8f80d002344b6cdf012e1eaac6032c8a83141f 119192 mptp-dbgsym_0.2.4-1_armhf.deb fa0b4d8f0fdb29fac3b7f0d78dc9b6bdc29ccebd 56228 mptp_0.2.4-1_armhf.deb Checksums-Sha256: fabefd412003d4055885ef83793535e8be14b0973f623e7e073afc2414c26b61 119192 mptp-dbgsym_0.2.4-1_armhf.deb 5bfc1995cddc12072a1647544f7dea345eb3f03ffcecfcb08852f0c7b1a58a3c 56228 mptp_0.2.4-1_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Tue, 12 Nov 2019 02:34:05 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.46), bash (= 5.0-5), bash-completion (= 1:2.9-1), binutils (= 2.33.1-2), binutils-common (= 2.33.1-2), binutils-x86-64-linux-gnu (= 2.33.1-2), bison (= 2:3.4.2+dfsg-1), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.34-0.1), build-essential (= 12.8), bzip2 (= 1.0.8-2), coreutils (= 8.30-3+b1), cpp (= 4:9.2.1-3.1), cpp-8 (= 8.3.0-24), cpp-9 (= 9.2.1-19), dash (= 0.5.10.2-6), debconf (= 1.5.73), debhelper (= 12.7.1), debianutils (= 4.9), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.6.2-1), diffutils (= 1:3.7-3), dpkg (= 1.19.7), dpkg-dev (= 1.19.7), dwz (= 0.13-2), fdisk (= 2.34-0.1), file (= 1:5.37-6), findutils (= 4.7.0-1), flex (= 2.6.4-6.2), g++ (= 4:9.2.1-3.1), g++-9 (= 9.2.1-19), gcc (= 4:9.2.1-3.1), gcc-8 (= 8.3.0-24), gcc-8-base (= 8.3.0-24), gcc-9 (= 9.2.1-19), gcc-9-base (= 9.2.1-19), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), grep (= 3.3-1), groff-base (= 1.22.4-3), gzip (= 1.9-3+b1), hostname (= 3.23), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-5), libarchive-zip-perl (= 1.67-1), libasan5 (= 9.2.1-19), libatomic1 (= 9.2.1-19), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-2), libaudit1 (= 1:2.8.5-2), libbinutils (= 2.33.1-2), libblkid1 (= 2.34-0.1), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.8-2), libc-bin (= 2.29-3), libc-dev-bin (= 2.29-3), libc6 (= 2.29-3), libc6-dev (= 2.29-3), libcap-ng0 (= 0.7.9-2.1), libcc1-0 (= 9.2.1-19), libcroco3 (= 0.6.13-1), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.250), libdebhelper-perl (= 12.7.1), libdpkg-perl (= 1.19.7), libelf1 (= 0.176-1.1), libfdisk1 (= 2.34-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.6.2-1), libgcc-8-dev (= 8.3.0-24), libgcc-9-dev (= 9.2.1-19), libgcc1 (= 1:9.2.1-19), libgcrypt20 (= 1.8.5-3), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libglib2.0-0 (= 2.62.2-3), libgmp10 (= 2:6.1.2+dfsg-4), libgomp1 (= 9.2.1-19), libgpg-error0 (= 1.36-7), libgsl-dev (= 2.5+dfsg-6+b1), libgsl23 (= 2.5+dfsg-6+b1), libgslcblas0 (= 2.5+dfsg-6+b1), libicu63 (= 63.2-2), libisl21 (= 0.21-2), libitm1 (= 9.2.1-19), liblsan0 (= 9.2.1-19), liblz4-1 (= 1.9.2-1), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.37-6), libmagic1 (= 1:5.37-6), libmount1 (= 2.34-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-24), libncurses6 (= 6.1+20191019-1), libncursesw6 (= 6.1+20191019-1), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.32-5+b1), libpcre3 (= 2:8.39-12+b1), libperl5.30 (= 5.30.0-9), libpipeline1 (= 1.5.1-2), libquadmath0 (= 9.2.1-19), libseccomp2 (= 2.4.1-2), libselinux1 (= 2.9-2+b2), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.34-0.1), libstdc++-9-dev (= 9.2.1-19), libstdc++6 (= 9.2.1-19), libsub-override-perl (= 0.09-2), libsystemd0 (= 243-5), libtinfo6 (= 6.1+20191019-1), libtool (= 2.4.6-11), libtsan0 (= 9.2.1-19), libubsan1 (= 9.2.1-19), libuchardet0 (= 0.0.6-3), libudev1 (= 243-5), libunistring2 (= 0.9.10-2), libuuid1 (= 2.34-0.1), libxml2 (= 2.9.4+dfsg1-7+b3), linux-libc-dev (= 5.3.9-1), login (= 1:4.7-2), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.2.1-1.2), man-db (= 2.9.0-1), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20191019-1), ncurses-bin (= 6.1+20191019-1), patch (= 2.7.6-6), perl (= 5.30.0-9), perl-base (= 5.30.0-9), perl-modules-5.30 (= 5.30.0-9), pkg-config (= 0.29-6), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.96-1), tar (= 1.30+dfsg-6+b1), util-linux (= 2.34-0.1), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-1+b1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1527577040" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ mptp-dbgsym_0.2.4-1_armhf.deb ----------------------------- new Debian package, version 2.0. size 119192 bytes: control archive=532 bytes. 358 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: mptp-dbgsym Source: mptp Version: 0.2.4-1 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 145 Depends: mptp (= 0.2.4-1) Section: debug Priority: optional Description: debug symbols for mptp Build-Ids: 9c901d7614403eb5267b1b91b52323f44dba6c29 drwxr-xr-x root/root 0 2018-05-29 06:57 ./ drwxr-xr-x root/root 0 2018-05-29 06:57 ./usr/ drwxr-xr-x root/root 0 2018-05-29 06:57 ./usr/lib/ drwxr-xr-x root/root 0 2018-05-29 06:57 ./usr/lib/debug/ drwxr-xr-x root/root 0 2018-05-29 06:57 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2018-05-29 06:57 ./usr/lib/debug/.build-id/9c/ -rw-r--r-- root/root 137840 2018-05-29 06:57 ./usr/lib/debug/.build-id/9c/901d7614403eb5267b1b91b52323f44dba6c29.debug drwxr-xr-x root/root 0 2018-05-29 06:57 ./usr/share/ drwxr-xr-x root/root 0 2018-05-29 06:57 ./usr/share/doc/ lrwxrwxrwx root/root 0 2018-05-29 06:57 ./usr/share/doc/mptp-dbgsym -> mptp mptp_0.2.4-1_armhf.deb ---------------------- new Debian package, version 2.0. size 56228 bytes: control archive=1360 bytes. 1711 bytes, 35 lines control 455 bytes, 7 lines md5sums Package: mptp Version: 0.2.4-1 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 131 Depends: libc6 (>= 2.29), libgsl23 (>= 2.5) Recommends: bash-completion Section: science Priority: optional Homepage: https://github.com/Pas-Kapli/mptp Description: single-locus species delimitation Implementation of a fast species delimitation method, based on PTP (Zhang et al. 2013) with a 64-bit multi-threaded design that handles very large datasets. . The tool mPTP can handle very large biodiversity datasets. It implements a fast method to compute the ML delimitation from an inferred phylogenetic tree of the samples. Using MCMC, it also computes the support values for each clade, which can be used to assess the confidence of the ML delimitation. . ML delimitation mPTP implements two flavours of the point-estimate solution. First, it implements the original method from (Zhang et al. 2013) where all within-species processes are modelled with a single exponential distribution. mPTP uses a dynamic programming implementation which estimates the ML delimitation faster and more accurately than the original PTP. The dynamic programming implementation has similar properties as (Gulek et al. 2010). See the wiki for more information. The second method assumes a distinct exponential distribution for the branching events of each of the delimited species allowing it to fit to a wider range of empirical datasets. . MCMC method mPTP generates support values for each clades. They represent the ratio of the number of samples for which a particular node was in the between-species process, to the total number of samples. drwxr-xr-x root/root 0 2018-05-29 06:57 ./ drwxr-xr-x root/root 0 2018-05-29 06:57 ./usr/ drwxr-xr-x root/root 0 2018-05-29 06:57 ./usr/bin/ -rwxr-xr-x root/root 71716 2018-05-29 06:57 ./usr/bin/mptp drwxr-xr-x root/root 0 2018-05-29 06:57 ./usr/share/ drwxr-xr-x root/root 0 2018-05-29 06:57 ./usr/share/bash-completion/ drwxr-xr-x root/root 0 2018-05-29 06:57 ./usr/share/bash-completion/completions/ -rw-r--r-- root/root 823 2018-05-29 06:57 ./usr/share/bash-completion/completions/mptp drwxr-xr-x root/root 0 2018-05-29 06:57 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-05-29 06:57 ./usr/share/doc/mptp/ -rw-r--r-- root/root 4101 2018-05-14 15:59 ./usr/share/doc/mptp/README.md.gz -rw-r--r-- root/root 404 2018-05-29 06:57 ./usr/share/doc/mptp/changelog.Debian.gz -rw-r--r-- root/root 695 2018-05-14 15:59 ./usr/share/doc/mptp/changelog.gz -rw-r--r-- root/root 35464 2018-05-29 06:57 ./usr/share/doc/mptp/copyright drwxr-xr-x root/root 0 2018-05-29 06:57 ./usr/share/man/ drwxr-xr-x root/root 0 2018-05-29 06:57 ./usr/share/man/man1/ -rw-r--r-- root/root 5145 2018-05-29 06:57 ./usr/share/man/man1/mptp.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [569 B] Get:5 copy:/<>/apt_archive ./ Packages [653 B] Fetched 2185 B in 0s (98.4 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libdevel-callchecker-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libdata-dump-perl ca-certificates libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libfreezethaw-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libpackage-stash-xs-perl libunicode-utf8-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libdevel-callchecker-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:armhf t1utils 0 upgraded, 75 newly installed, 0 to remove and 0 not upgraded. Need to get 8854 kB of archives. After this operation, 25.0 MB of additional disk space will be used. 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Setting up libssl1.1:amd64 (1.1.1d-2) ... Setting up libhtml-tagset-perl (3.20-3) ... Setting up libsqlite3-0:amd64 (3.30.1-1) ... Setting up libfuture-perl (0.41-1) ... Setting up libyaml-libyaml-perl (0.80+repack-2+b1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up perl-openssl-defaults:amd64 (3) ... Setting up libmldbm-perl (2.05-2) ... Setting up libtext-levenshtein-perl (0.13-1) ... Setting up libassuan0:amd64 (2.5.3-7) ... Setting up libnumber-compare-perl (0.03-1) ... Setting up libio-async-perl (0.74-1) ... Setting up patchutils (0.3.4-2+b1) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up libdigest-hmac-perl (1.03+dfsg-2) ... Setting up libipc-system-simple-perl (1.25-4) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up t1utils (1.41-3) ... Setting up liblinux-epoll-perl (0.016-1+b2) ... Setting up diffstat (1.62-1+b1) ... Setting up libvariable-magic-perl (0.62-1+b2) ... Setting up libb-hooks-op-check-perl (0.22-1+b2) ... Setting up libipc-run-perl (20180523.0-2) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libsub-name-perl (0.26-1) ... Setting up libpath-tiny-perl (0.108-1) ... Setting up librole-tiny-perl (2.001004-1) ... Setting up netbase (5.6) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b3) ... Setting up libexporter-tiny-perl (1.002001-1) ... Setting up libclass-accessor-perl (0.51-1) ... Setting up libnet-ip-perl (1.26-2) ... Setting up readline-common (8.0-3) ... Setting up liburi-perl (1.76-1) ... Setting up libnet-ssleay-perl (1.88-1+b1) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b5) ... Setting up libreadline8:amd64 (8.0-3) ... Setting up libtype-tiny-perl (1.004004-1) ... Setting up libnet-dns-perl (1.20-1) ... Setting up libdevel-callchecker-perl (0.008-1+b1) ... Setting up libio-async-loop-epoll-perl (0.20-1) ... Setting up libhtml-parser-perl (3.72-3+b4) ... Setting up gpgconf (2.2.17-3) ... Setting up libio-socket-ssl-perl (2.066-1) ... Setting up gpg (2.2.17-3) ... Setting up libparams-classify-perl (0.015-1+b2) ... Setting up libcgi-pm-perl (4.44-1) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libmailtools-perl (2.21-1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libemail-valid-perl (1.202-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.003006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.34.0) ... Setting up sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Processing triggers for man-db (2.9.0-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.29-3) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 3864 Build-Time: 27 Distribution: unstable Foreign Architectures: armhf Host Architecture: armhf Install-Time: 20 Job: mptp_0.2.4-1 Lintian: pass Machine Architecture: amd64 Package: mptp Package-Time: 60 Source-Version: 0.2.4-1 Space: 3864 Status: successful Version: 0.2.4-1 -------------------------------------------------------------------------------- Finished at 2019-11-12T02:34:06Z Build needed 00:01:00, 3864k disk space