sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | mrbayes 3.2.7a-7 (arm64) Mon, 15 Jan 2024 20:11:38 +0000 | +==============================================================================+ Package: mrbayes Version: 3.2.7a-7 Source Version: 3.2.7a-7 Distribution: unstable Machine Architecture: amd64 Host Architecture: arm64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-d748d7e5-6496-4d91-bcfb-27b7a2fc38ce' with '<>' I: NOTICE: Log filtering will replace 'build/mrbayes-4nYhWm/resolver-k4T5IT' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [198 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2024-01-15-1404.10-F-2024-01-15-0205.22.pdiff [24.7 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2024-01-15-1404.10-F-2024-01-15-0205.22.pdiff [23.8 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2024-01-15-1404.10-F-2024-01-15-0205.22.pdiff [24.7 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2024-01-15-1404.10-F-2024-01-15-0205.22.pdiff [23.8 kB] Get:6 http://localhost:3142/debian sid/main arm64 Packages [9538 kB] Fetched 9911 kB in 3s (3725 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'mrbayes' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/mrbayes.git Please use: git clone https://salsa.debian.org/med-team/mrbayes.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 9829 kB of source archives. Get:1 http://localhost:3142/debian sid/main mrbayes 3.2.7a-7 (dsc) [2184 B] Get:2 http://localhost:3142/debian sid/main mrbayes 3.2.7a-7 (tar) [9819 kB] Get:3 http://localhost:3142/debian sid/main mrbayes 3.2.7a-7 (diff) [7380 B] Fetched 9829 kB in 0s (27.5 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/mrbayes-4nYhWm/mrbayes-3.2.7a' with '<>' I: NOTICE: Log filtering will replace 'build/mrbayes-4nYhWm' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), libreadline-dev, mpi-default-dev, libhmsbeagle-dev, autoconf-archive, pkg-config, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 Filtered Build-Depends: debhelper-compat (= 13), libreadline-dev, mpi-default-dev, libhmsbeagle-dev, autoconf-archive, pkg-config, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [796 B] Get:5 copy:/<>/apt_archive ./ Packages [839 B] Fetched 2244 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf autoconf-archive automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils cpp-13-aarch64-linux-gnu cpp-9:arm64 cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file flang-17:arm64 g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-13-aarch64-linux-gnu gcc-13-aarch64-linux-gnu-base gcc-13-base:arm64 gcc-13-cross-base gcc-9-base:arm64 gcc-aarch64-linux-gnu gettext gettext-base groff-base ibverbs-providers ibverbs-providers:arm64 intltool-debian libarchive-zip-perl libasan8:arm64 libasan8-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libbsd0 libbsd0:arm64 libc6:arm64 libc6-arm64-cross libc6-dev:arm64 libc6-dev-arm64-cross libcap2:arm64 libcbor0.10 libcc1-0:arm64 libclang-common-17-dev libclang-cpp17:arm64 libclc-17 libclc-17-dev libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:arm64 libcrypt1:arm64 libdebhelper-perl libdebian-dpkgcross-perl libdrm-amdgpu1:arm64 libdrm-common libdrm-nouveau2:arm64 libdrm-radeon1:arm64 libdrm2:arm64 libedit2 libedit2:arm64 libelf1 libelf1:arm64 libevent-2.1-7:arm64 libevent-core-2.1-7 libevent-core-2.1-7:arm64 libevent-dev:arm64 libevent-extra-2.1-7:arm64 libevent-openssl-2.1-7:arm64 libevent-pthreads-2.1-7 libevent-pthreads-2.1-7:arm64 libexpat1:arm64 libfabric1 libfabric1:arm64 libffi8:arm64 libfido2-1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libflang-17-dev:arm64 libgcc-13-dev:arm64 libgcc-13-dev-arm64-cross libgcc-s1:arm64 libgcc-s1-arm64-cross libgmp10:arm64 libgomp1:arm64 libgomp1-arm64-cross libgssapi-krb5-2:arm64 libhmsbeagle-dev:arm64 libhmsbeagle1v5:arm64 libhwasan0:arm64 libhwasan0-arm64-cross libhwloc-dev:arm64 libhwloc-plugins libhwloc-plugins:arm64 libhwloc15 libhwloc15:arm64 libibverbs-dev:arm64 libibverbs1 libibverbs1:arm64 libicu72 libicu72:arm64 libio-string-perl libisl23:arm64 libitm1:arm64 libitm1-arm64-cross libjs-jquery libjs-jquery-ui libk5crypto3:arm64 libkeyutils1:arm64 libkrb5-3:arm64 libkrb5support0:arm64 libllvm17:arm64 libllvmspirvlib17:arm64 liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross libltdl-dev:arm64 libltdl7:arm64 liblzma5:arm64 libmagic-mgc libmagic1 libmd0:arm64 libmpc3:arm64 libmpfr6:arm64 libmunge2 libmunge2:arm64 libncurses-dev:arm64 libncurses6:arm64 libncursesw6:arm64 libnl-3-200 libnl-3-200:arm64 libnl-3-dev:arm64 libnl-route-3-200 libnl-route-3-200:arm64 libnl-route-3-dev:arm64 libnsl-dev:arm64 libnsl2:arm64 libnuma-dev:arm64 libnuma1 libnuma1:arm64 libopenmpi-dev:arm64 libopenmpi3 libopenmpi3:arm64 libpciaccess0 libpciaccess0:arm64 libpipeline1 libpkgconf3 libpmix-dev:arm64 libpmix2 libpmix2:arm64 libpsm-infinipath1 libpsm2-2 librdmacm1 librdmacm1:arm64 libreadline-dev:arm64 libreadline8:arm64 libssl3:arm64 libstdc++-13-dev:arm64 libstdc++-13-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libtinfo6:arm64 libtirpc-dev:arm64 libtirpc3:arm64 libtool libtsan2:arm64 libtsan2-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libucx0 libucx0:arm64 libudev1:arm64 libx11-6 libx11-6:arm64 libx11-data libxau6 libxau6:arm64 libxcb1 libxcb1:arm64 libxdmcp6 libxdmcp6:arm64 libxext6 libxext6:arm64 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxml2:arm64 libxnvctrl0 libxnvctrl0:arm64 libyaml-perl libz3-4:arm64 libzstd1:arm64 linux-libc-dev-arm64-cross m4 man-db mesa-opencl-icd:arm64 mpi-default-dev:arm64 ocl-icd-libopencl1 ocl-icd-libopencl1:arm64 openmpi-bin openmpi-common openssh-client pkg-config:arm64 pkgconf:arm64 pkgconf-bin po-debconf readline-common sensible-utils ucf zlib1g:arm64 zlib1g-dev:arm64 Suggested packages: gnu-standards autoconf-doc binutils-doc gcc-13-locales cpp-13-doc gcc-9-locales:arm64 cpp-doc dh-make binutils-multiarch gcc-13-doc manpages-dev flex bison gdb-aarch64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:arm64 libc-l10n:arm64 locales:arm64 libnss-nis:arm64 libnss-nisplus:arm64 manpages-dev:arm64 krb5-doc:arm64 krb5-user:arm64 libhwloc-contrib-plugins libjs-jquery-ui-docs libtool-doc:arm64 ncurses-doc:arm64 openmpi-doc:arm64 pciutils pciutils:arm64 readline-doc:arm64 libstdc++-13-doc:arm64 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser opencl-icd gfortran | fortran-compiler keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl readline-doc Recommended packages: curl | wget | lynx libidn2-0:arm64 libclang-rt-17-dev libarchive-cpio-perl javascript-common krb5-locales:arm64 libgpm2:arm64 libcoarrays-openmpi-dev:arm64 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl xauth libmail-sendmail-perl The following NEW packages will be installed: autoconf autoconf-archive automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils cpp-13-aarch64-linux-gnu cpp-9:arm64 cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file flang-17:arm64 g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-13-aarch64-linux-gnu gcc-13-aarch64-linux-gnu-base gcc-13-base:arm64 gcc-13-cross-base gcc-9-base:arm64 gcc-aarch64-linux-gnu gettext gettext-base groff-base ibverbs-providers ibverbs-providers:arm64 intltool-debian libarchive-zip-perl libasan8:arm64 libasan8-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libbsd0 libbsd0:arm64 libc6:arm64 libc6-arm64-cross libc6-dev:arm64 libc6-dev-arm64-cross libcap2:arm64 libcbor0.10 libcc1-0:arm64 libclang-common-17-dev libclang-cpp17:arm64 libclc-17 libclc-17-dev libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:arm64 libcrypt1:arm64 libdebhelper-perl libdebian-dpkgcross-perl libdrm-amdgpu1:arm64 libdrm-common libdrm-nouveau2:arm64 libdrm-radeon1:arm64 libdrm2:arm64 libedit2 libedit2:arm64 libelf1 libelf1:arm64 libevent-2.1-7:arm64 libevent-core-2.1-7 libevent-core-2.1-7:arm64 libevent-dev:arm64 libevent-extra-2.1-7:arm64 libevent-openssl-2.1-7:arm64 libevent-pthreads-2.1-7 libevent-pthreads-2.1-7:arm64 libexpat1:arm64 libfabric1 libfabric1:arm64 libffi8:arm64 libfido2-1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libflang-17-dev:arm64 libgcc-13-dev:arm64 libgcc-13-dev-arm64-cross libgcc-s1:arm64 libgcc-s1-arm64-cross libgmp10:arm64 libgomp1:arm64 libgomp1-arm64-cross libgssapi-krb5-2:arm64 libhmsbeagle-dev:arm64 libhmsbeagle1v5:arm64 libhwasan0:arm64 libhwasan0-arm64-cross libhwloc-dev:arm64 libhwloc-plugins libhwloc-plugins:arm64 libhwloc15 libhwloc15:arm64 libibverbs-dev:arm64 libibverbs1 libibverbs1:arm64 libicu72 libicu72:arm64 libio-string-perl libisl23:arm64 libitm1:arm64 libitm1-arm64-cross libjs-jquery libjs-jquery-ui libk5crypto3:arm64 libkeyutils1:arm64 libkrb5-3:arm64 libkrb5support0:arm64 libllvm17:arm64 libllvmspirvlib17:arm64 liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross libltdl-dev:arm64 libltdl7:arm64 liblzma5:arm64 libmagic-mgc libmagic1 libmd0:arm64 libmpc3:arm64 libmpfr6:arm64 libmunge2 libmunge2:arm64 libncurses-dev:arm64 libncurses6:arm64 libncursesw6:arm64 libnl-3-200 libnl-3-200:arm64 libnl-3-dev:arm64 libnl-route-3-200 libnl-route-3-200:arm64 libnl-route-3-dev:arm64 libnsl-dev:arm64 libnsl2:arm64 libnuma-dev:arm64 libnuma1 libnuma1:arm64 libopenmpi-dev:arm64 libopenmpi3 libopenmpi3:arm64 libpciaccess0 libpciaccess0:arm64 libpipeline1 libpkgconf3 libpmix-dev:arm64 libpmix2 libpmix2:arm64 libpsm-infinipath1 libpsm2-2 librdmacm1 librdmacm1:arm64 libreadline-dev:arm64 libreadline8:arm64 libssl3:arm64 libstdc++-13-dev:arm64 libstdc++-13-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libtinfo6:arm64 libtirpc-dev:arm64 libtirpc3:arm64 libtool libtsan2:arm64 libtsan2-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libucx0 libucx0:arm64 libudev1:arm64 libx11-6 libx11-6:arm64 libx11-data libxau6 libxau6:arm64 libxcb1 libxcb1:arm64 libxdmcp6 libxdmcp6:arm64 libxext6 libxext6:arm64 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxml2:arm64 libxnvctrl0 libxnvctrl0:arm64 libyaml-perl libz3-4:arm64 libzstd1:arm64 linux-libc-dev-arm64-cross m4 man-db mesa-opencl-icd:arm64 mpi-default-dev:arm64 ocl-icd-libopencl1 ocl-icd-libopencl1:arm64 openmpi-bin openmpi-common openssh-client pkg-config:arm64 pkgconf:arm64 pkgconf-bin po-debconf readline-common sbuild-build-depends-main-dummy:arm64 sensible-utils ucf zlib1g:arm64 zlib1g-dev:arm64 0 upgraded, 222 newly installed, 0 to remove and 0 not upgraded. Need to get 250 MB of archives. After this operation, 1715 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [964 B] Get:2 http://localhost:3142/debian sid/main amd64 autoconf-archive all 20220903-3 [775 kB] Get:3 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-6+b1 [15.2 kB] Get:4 http://localhost:3142/debian sid/main amd64 readline-common all 8.2-3 [69.1 kB] Get:5 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.20 [19.3 kB] Get:6 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.45-2+b1 [314 kB] Get:7 http://localhost:3142/debian sid/main amd64 libmagic1 amd64 1:5.45-2+b1 [105 kB] Get:8 http://localhost:3142/debian sid/main amd64 file amd64 1:5.45-2+b1 [43.1 kB] Get:9 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-14 [161 kB] Get:10 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.8-1 [68.5 kB] Get:11 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.23.0-3 [1180 kB] Get:12 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.39.3-6 [89.4 kB] Get:13 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.7-1+b2 [38.1 kB] Get:14 http://localhost:3142/debian sid/main amd64 man-db amd64 2.12.0-3 [1401 kB] Get:15 http://localhost:3142/debian sid/main amd64 libbsd0 amd64 0.11.8-1 [125 kB] Get:16 http://localhost:3142/debian sid/main amd64 libedit2 amd64 3.1-20230828-1 [93.1 kB] Get:17 http://localhost:3142/debian sid/main amd64 libcbor0.10 amd64 0.10.2-1.1 [27.8 kB] Get:18 http://localhost:3142/debian sid/main amd64 libfido2-1 amd64 1.14.0-1 [77.4 kB] Get:19 http://localhost:3142/debian sid/main amd64 openssh-client amd64 1:9.6p1-2 [975 kB] Get:20 http://localhost:3142/debian sid/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:21 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-4 [287 kB] Get:22 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-3 [332 kB] Get:23 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:24 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:25 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-14 [496 kB] Get:26 http://localhost:3142/debian sid/main amd64 binutils-aarch64-linux-gnu amd64 2.41.50.20231227-1 [3371 kB] Get:27 http://localhost:3142/debian sid/main amd64 gcc-13-aarch64-linux-gnu-base amd64 13.2.0-7cross2 [41.0 kB] Get:28 http://localhost:3142/debian sid/main amd64 cpp-13-aarch64-linux-gnu amd64 13.2.0-7cross2 [9771 kB] Get:29 http://localhost:3142/debian sid/main arm64 gcc-9-base arm64 9.5.0-4 [28.7 kB] Get:30 http://localhost:3142/debian sid/main arm64 gcc-13-base arm64 13.2.0-9 [41.5 kB] Get:31 http://localhost:3142/debian sid/main arm64 libgcc-s1 arm64 13.2.0-9 [40.9 kB] Get:32 http://localhost:3142/debian sid/main arm64 libc6 arm64 2.37-13 [2316 kB] Get:33 http://localhost:3142/debian sid/main arm64 libgmp10 arm64 2:6.3.0+dfsg-2 [531 kB] Get:34 http://localhost:3142/debian sid/main arm64 libisl23 arm64 0.26-3+b2 [592 kB] Get:35 http://localhost:3142/debian sid/main arm64 libmpfr6 arm64 4.2.1-1 [672 kB] Get:36 http://localhost:3142/debian sid/main arm64 libmpc3 arm64 1.3.1-1+b2 [50.2 kB] Get:37 http://localhost:3142/debian sid/main arm64 zlib1g arm64 1:1.3.dfsg-3+b1 [83.9 kB] Get:38 http://localhost:3142/debian sid/main arm64 cpp-9 arm64 9.5.0-4 [8400 kB] Get:39 http://localhost:3142/debian sid/main amd64 cpp-aarch64-linux-gnu amd64 4:13.2.0-2 [4164 B] Get:40 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.20 [16.3 kB] Get:41 http://localhost:3142/debian sid/main amd64 gcc-13-cross-base all 13.2.0-7cross2 [36.6 kB] Get:42 http://localhost:3142/debian sid/main amd64 libc6-arm64-cross all 2.37-12cross1 [1006 kB] Get:43 http://localhost:3142/debian sid/main amd64 libgcc-s1-arm64-cross all 13.2.0-7cross2 [40.8 kB] Get:44 http://localhost:3142/debian sid/main amd64 libgomp1-arm64-cross all 13.2.0-7cross2 [112 kB] Get:45 http://localhost:3142/debian sid/main amd64 libitm1-arm64-cross all 13.2.0-7cross2 [23.3 kB] Get:46 http://localhost:3142/debian sid/main amd64 libatomic1-arm64-cross all 13.2.0-7cross2 [9892 B] Get:47 http://localhost:3142/debian sid/main amd64 libasan8-arm64-cross all 13.2.0-7cross2 [2407 kB] Get:48 http://localhost:3142/debian sid/main amd64 liblsan0-arm64-cross all 13.2.0-7cross2 [1068 kB] Get:49 http://localhost:3142/debian sid/main amd64 libtsan2-arm64-cross all 13.2.0-7cross2 [2278 kB] Get:50 http://localhost:3142/debian sid/main amd64 libstdc++6-arm64-cross all 13.2.0-7cross2 [575 kB] Get:51 http://localhost:3142/debian sid/main amd64 libubsan1-arm64-cross all 13.2.0-7cross2 [980 kB] Get:52 http://localhost:3142/debian sid/main amd64 libhwasan0-arm64-cross all 13.2.0-7cross2 [1119 kB] Get:53 http://localhost:3142/debian sid/main amd64 libgcc-13-dev-arm64-cross all 13.2.0-7cross2 [2226 kB] Get:54 http://localhost:3142/debian sid/main amd64 gcc-13-aarch64-linux-gnu amd64 13.2.0-7cross2 [19.2 MB] Get:55 http://localhost:3142/debian sid/main amd64 gcc-aarch64-linux-gnu amd64 4:13.2.0-2 [1468 B] Get:56 http://localhost:3142/debian sid/main amd64 linux-libc-dev-arm64-cross all 6.5.8-1cross1 [1990 kB] Get:57 http://localhost:3142/debian sid/main amd64 libc6-dev-arm64-cross all 2.37-12cross1 [1427 kB] Get:58 http://localhost:3142/debian sid/main amd64 libstdc++-13-dev-arm64-cross all 13.2.0-7cross2 [2138 kB] Get:59 http://localhost:3142/debian sid/main amd64 g++-13-aarch64-linux-gnu amd64 13.2.0-7cross2 [10.7 MB] Get:60 http://localhost:3142/debian sid/main amd64 g++-aarch64-linux-gnu amd64 4:13.2.0-2 [1176 B] Get:61 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:62 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:63 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-4 [9396 kB] Get:64 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b2 [692 kB] Get:65 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:66 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:67 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:68 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b2 [313 kB] Get:69 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:70 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.31-1 [64.8 kB] Get:71 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:72 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:73 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:74 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:75 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.20 [25.8 kB] Get:76 http://localhost:3142/debian sid/main amd64 crossbuild-essential-arm64 all 12.10 [3484 B] Get:77 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.11.9 [82.3 kB] Get:78 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-7 [517 kB] Get:79 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:80 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:81 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.10-1 [10.6 kB] Get:82 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:83 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:84 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.190-1+b1 [176 kB] Get:85 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1 [109 kB] Get:86 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-14 [1300 kB] Get:87 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:88 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:89 http://localhost:3142/debian sid/main amd64 debhelper all 13.11.9 [956 kB] Get:90 http://localhost:3142/debian sid/main arm64 libmd0 arm64 1.1.0-2 [32.7 kB] Get:91 http://localhost:3142/debian sid/main arm64 libbsd0 arm64 0.11.8-1 [123 kB] Get:92 http://localhost:3142/debian sid/main arm64 libtinfo6 arm64 6.4+20231209-1 [334 kB] Get:93 http://localhost:3142/debian sid/main arm64 libedit2 arm64 3.1-20230828-1 [88.9 kB] Get:94 http://localhost:3142/debian sid/main arm64 libffi8 arm64 3.4.4-2 [20.8 kB] Get:95 http://localhost:3142/debian sid/main arm64 libstdc++6 arm64 13.2.0-9 [622 kB] Get:96 http://localhost:3142/debian sid/main arm64 libicu72 arm64 72.1-4 [9223 kB] Get:97 http://localhost:3142/debian sid/main arm64 liblzma5 arm64 5.4.5-0.3 [233 kB] Get:98 http://localhost:3142/debian sid/main arm64 libxml2 arm64 2.9.14+dfsg-1.3+b2 [624 kB] Get:99 http://localhost:3142/debian sid/main arm64 libz3-4 arm64 4.8.12-3.1+b2 [6508 kB] Get:100 http://localhost:3142/debian sid/main arm64 libzstd1 arm64 1.5.5+dfsg2-2 [256 kB] Get:101 http://localhost:3142/debian sid/main arm64 libllvm17 arm64 1:17.0.6-5 [21.3 MB] Get:102 http://localhost:3142/debian sid/main arm64 libclang-cpp17 arm64 1:17.0.6-5 [10.8 MB] Get:103 http://localhost:3142/debian sid/main arm64 libgomp1 arm64 13.2.0-9 [118 kB] Get:104 http://localhost:3142/debian sid/main arm64 libitm1 arm64 13.2.0-9 [23.9 kB] Get:105 http://localhost:3142/debian sid/main arm64 libatomic1 arm64 13.2.0-9 [10.2 kB] Get:106 http://localhost:3142/debian sid/main arm64 libasan8 arm64 13.2.0-9 [2414 kB] Get:107 http://localhost:3142/debian sid/main arm64 liblsan0 arm64 13.2.0-9 [1069 kB] Get:108 http://localhost:3142/debian sid/main arm64 libtsan2 arm64 13.2.0-9 [2286 kB] Get:109 http://localhost:3142/debian sid/main arm64 libubsan1 arm64 13.2.0-9 [981 kB] Get:110 http://localhost:3142/debian sid/main arm64 libhwasan0 arm64 13.2.0-9 [1120 kB] Get:111 http://localhost:3142/debian sid/main arm64 libgcc-13-dev arm64 13.2.0-9 [2236 kB] Get:112 http://localhost:3142/debian sid/main arm64 libcrypt1 arm64 1:4.4.36-4 [90.5 kB] Get:113 http://localhost:3142/debian sid/main arm64 libcrypt-dev arm64 1:4.4.36-4 [121 kB] Get:114 http://localhost:3142/debian sid/main arm64 libkrb5support0 arm64 1.20.1-5 [32.5 kB] Get:115 http://localhost:3142/debian sid/main arm64 libcom-err2 arm64 1.47.0-2+b1 [19.9 kB] Get:116 http://localhost:3142/debian sid/main arm64 libk5crypto3 arm64 1.20.1-5 [79.9 kB] Get:117 http://localhost:3142/debian sid/main arm64 libkeyutils1 arm64 1.6.3-2+b2 [9296 B] Get:118 http://localhost:3142/debian sid/main arm64 libssl3 arm64 3.1.4-2 [1835 kB] Get:119 http://localhost:3142/debian sid/main arm64 libkrb5-3 arm64 1.20.1-5 [315 kB] Get:120 http://localhost:3142/debian sid/main arm64 libgssapi-krb5-2 arm64 1.20.1-5 [124 kB] Get:121 http://localhost:3142/debian sid/main arm64 libtirpc3 arm64 1.3.4+ds-1 [77.9 kB] Get:122 http://localhost:3142/debian sid/main arm64 libnsl2 arm64 1.3.0-3 [37.5 kB] Get:123 http://localhost:3142/debian sid/main arm64 libtirpc-dev arm64 1.3.4+ds-1 [192 kB] Get:124 http://localhost:3142/debian sid/main arm64 libnsl-dev arm64 1.3.0-3 [66.3 kB] Get:125 http://localhost:3142/debian sid/main arm64 libc6-dev arm64 2.37-13 [1433 kB] Get:126 http://localhost:3142/debian sid/main arm64 libstdc++-13-dev arm64 13.2.0-9 [2139 kB] Get:127 http://localhost:3142/debian sid/main arm64 libflang-17-dev arm64 1:17.0.6-5 [16.3 MB] Get:128 http://localhost:3142/debian sid/main arm64 flang-17 arm64 1:17.0.6-5 [19.3 MB] Get:129 http://localhost:3142/debian sid/main arm64 libnl-3-200 arm64 3.7.0-0.2+b1 [60.2 kB] Get:130 http://localhost:3142/debian sid/main arm64 libnl-route-3-200 arm64 3.7.0-0.2+b1 [168 kB] Get:131 http://localhost:3142/debian sid/main arm64 libibverbs1 arm64 48.0-1 [57.6 kB] Get:132 http://localhost:3142/debian sid/main arm64 ibverbs-providers arm64 48.0-1 [313 kB] Get:133 http://localhost:3142/debian sid/main amd64 libnl-3-200 amd64 3.7.0-0.2+b1 [63.1 kB] Get:134 http://localhost:3142/debian sid/main amd64 libnl-route-3-200 amd64 3.7.0-0.2+b1 [185 kB] Get:135 http://localhost:3142/debian sid/main amd64 libibverbs1 amd64 48.0-1 [61.2 kB] Get:136 http://localhost:3142/debian sid/main amd64 ibverbs-providers amd64 48.0-1 [340 kB] Get:137 http://localhost:3142/debian sid/main arm64 libcap2 arm64 1:2.66-4+b2 [26.9 kB] Get:138 http://localhost:3142/debian sid/main arm64 libcc1-0 arm64 13.2.0-9 [41.6 kB] Get:139 http://localhost:3142/debian sid/main amd64 libclang-common-17-dev all 1:17.0.6-5 [681 kB] Get:140 http://localhost:3142/debian sid/main amd64 libclc-17-dev all 1:17.0.6-5 [60.5 kB] Get:141 http://localhost:3142/debian sid/main amd64 libclc-17 all 1:17.0.6-5 [9850 kB] Get:142 http://localhost:3142/debian sid/main amd64 libdrm-common all 2.4.117-1 [7264 B] Get:143 http://localhost:3142/debian sid/main arm64 libdrm2 arm64 2.4.117-1 [37.0 kB] Get:144 http://localhost:3142/debian sid/main arm64 libdrm-amdgpu1 arm64 2.4.117-1 [20.5 kB] Get:145 http://localhost:3142/debian sid/main arm64 libdrm-nouveau2 arm64 2.4.117-1 [18.4 kB] Get:146 http://localhost:3142/debian sid/main arm64 libdrm-radeon1 arm64 2.4.117-1 [20.7 kB] Get:147 http://localhost:3142/debian sid/main arm64 libelf1 arm64 0.190-1+b1 [175 kB] Get:148 http://localhost:3142/debian sid/main arm64 libevent-2.1-7 arm64 2.1.12-stable-8 [168 kB] Get:149 http://localhost:3142/debian sid/main arm64 libevent-core-2.1-7 arm64 2.1.12-stable-8 [124 kB] Get:150 http://localhost:3142/debian sid/main amd64 libevent-core-2.1-7 amd64 2.1.12-stable-8 [131 kB] Get:151 http://localhost:3142/debian sid/main arm64 libevent-extra-2.1-7 arm64 2.1.12-stable-8 [101 kB] Get:152 http://localhost:3142/debian sid/main arm64 libevent-pthreads-2.1-7 arm64 2.1.12-stable-8 [53.7 kB] Get:153 http://localhost:3142/debian sid/main arm64 libevent-openssl-2.1-7 arm64 2.1.12-stable-8 [59.7 kB] Get:154 http://localhost:3142/debian sid/main arm64 libevent-dev arm64 2.1.12-stable-8 [302 kB] Get:155 http://localhost:3142/debian sid/main amd64 libevent-pthreads-2.1-7 amd64 2.1.12-stable-8 [53.6 kB] Get:156 http://localhost:3142/debian sid/main arm64 libexpat1 arm64 2.5.0-2+b2 [85.8 kB] Get:157 http://localhost:3142/debian sid/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB] Get:158 http://localhost:3142/debian sid/main amd64 libnuma1 amd64 2.0.16-1 [21.0 kB] Get:159 http://localhost:3142/debian sid/main amd64 libpsm2-2 amd64 11.2.185-2 [180 kB] Get:160 http://localhost:3142/debian sid/main amd64 librdmacm1 amd64 48.0-1 [69.5 kB] Get:161 http://localhost:3142/debian sid/main amd64 libfabric1 amd64 1.17.0-3 [627 kB] Get:162 http://localhost:3142/debian sid/main arm64 librdmacm1 arm64 48.0-1 [65.8 kB] Get:163 http://localhost:3142/debian sid/main arm64 libfabric1 arm64 1.17.0-3 [476 kB] Get:164 http://localhost:3142/debian sid/main arm64 ocl-icd-libopencl1 arm64 2.3.2-1 [38.6 kB] Get:165 http://localhost:3142/debian sid/main arm64 libllvmspirvlib17 arm64 17.0.0-3 [731 kB] Get:166 http://localhost:3142/debian sid/main arm64 mesa-opencl-icd arm64 23.3.3-1 [15.6 MB] Get:167 http://localhost:3142/debian sid/main arm64 libhmsbeagle1v5 arm64 3.1.2+dfsg-13 [94.8 kB] Get:168 http://localhost:3142/debian sid/main arm64 libhmsbeagle-dev arm64 3.1.2+dfsg-13 [224 kB] Get:169 http://localhost:3142/debian sid/main arm64 libudev1 arm64 255.2-4 [117 kB] Get:170 http://localhost:3142/debian sid/main arm64 libhwloc15 arm64 2.10.0-1 [139 kB] Get:171 http://localhost:3142/debian sid/main arm64 libnuma1 arm64 2.0.16-1 [20.3 kB] Get:172 http://localhost:3142/debian sid/main arm64 libnuma-dev arm64 2.0.16-1 [36.0 kB] Get:173 http://localhost:3142/debian sid/main arm64 libltdl7 arm64 2.4.7-7 [392 kB] Get:174 http://localhost:3142/debian sid/main arm64 libltdl-dev arm64 2.4.7-7 [165 kB] Get:175 http://localhost:3142/debian sid/main arm64 libhwloc-dev arm64 2.10.0-1 [233 kB] Get:176 http://localhost:3142/debian sid/main amd64 libpciaccess0 amd64 0.17-3 [51.6 kB] Get:177 http://localhost:3142/debian sid/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get:178 http://localhost:3142/debian sid/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:179 http://localhost:3142/debian sid/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get:180 http://localhost:3142/debian sid/main amd64 libx11-data all 2:1.8.7-1 [328 kB] Get:181 http://localhost:3142/debian sid/main amd64 libx11-6 amd64 2:1.8.7-1 [802 kB] Get:182 http://localhost:3142/debian sid/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get:183 http://localhost:3142/debian sid/main amd64 libxnvctrl0 amd64 525.125.06-1 [13.5 kB] Get:184 http://localhost:3142/debian sid/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1 [39.7 kB] Get:185 http://localhost:3142/debian sid/main amd64 libhwloc15 amd64 2.10.0-1 [161 kB] Get:186 http://localhost:3142/debian sid/main amd64 libhwloc-plugins amd64 2.10.0-1 [17.7 kB] Get:187 http://localhost:3142/debian sid/main arm64 libpciaccess0 arm64 0.17-3 [50.8 kB] Get:188 http://localhost:3142/debian sid/main arm64 libxau6 arm64 1:1.0.9-1 [19.7 kB] Get:189 http://localhost:3142/debian sid/main arm64 libxdmcp6 arm64 1:1.1.2-3 [25.4 kB] Get:190 http://localhost:3142/debian sid/main arm64 libxcb1 arm64 1.15-1 [143 kB] Get:191 http://localhost:3142/debian sid/main arm64 libx11-6 arm64 2:1.8.7-1 [772 kB] Get:192 http://localhost:3142/debian sid/main arm64 libxext6 arm64 2:1.3.4-1+b1 [51.7 kB] Get:193 http://localhost:3142/debian sid/main arm64 libxnvctrl0 arm64 525.125.06-1 [13.4 kB] Get:194 http://localhost:3142/debian sid/main arm64 libhwloc-plugins arm64 2.10.0-1 [17.7 kB] Get:195 http://localhost:3142/debian sid/main arm64 libnl-3-dev arm64 3.7.0-0.2+b1 [104 kB] Get:196 http://localhost:3142/debian sid/main arm64 libnl-route-3-dev arm64 3.7.0-0.2+b1 [200 kB] Get:197 http://localhost:3142/debian sid/main arm64 libibverbs-dev arm64 48.0-1 [622 kB] Get:198 http://localhost:3142/debian sid/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get:199 http://localhost:3142/debian sid/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get:200 http://localhost:3142/debian sid/main amd64 libmunge2 amd64 0.5.15-3 [19.7 kB] Get:201 http://localhost:3142/debian sid/main arm64 libmunge2 arm64 0.5.15-3 [19.1 kB] Get:202 http://localhost:3142/debian sid/main arm64 libncurses6 arm64 6.4+20231209-1 [95.6 kB] Get:203 http://localhost:3142/debian sid/main arm64 libncursesw6 arm64 6.4+20231209-1 [124 kB] Get:204 http://localhost:3142/debian sid/main arm64 libncurses-dev arm64 6.4+20231209-1 [337 kB] Get:205 http://localhost:3142/debian sid/main arm64 libpmix2 arm64 5.0.1-4 [573 kB] Get:206 http://localhost:3142/debian sid/main arm64 libucx0 arm64 1.15.0-1 [806 kB] Get:207 http://localhost:3142/debian sid/main arm64 libopenmpi3 arm64 4.1.6-5 [2166 kB] Get:208 http://localhost:3142/debian sid/main amd64 openmpi-common all 4.1.6-5 [168 kB] Get:209 http://localhost:3142/debian sid/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3+b1 [916 kB] Get:210 http://localhost:3142/debian sid/main arm64 libpmix-dev arm64 5.0.1-4 [3896 kB] Get:211 http://localhost:3142/debian sid/main amd64 libpmix2 amd64 5.0.1-4 [644 kB] Get:212 http://localhost:3142/debian sid/main amd64 libucx0 amd64 1.15.0-1 [940 kB] Get:213 http://localhost:3142/debian sid/main amd64 libopenmpi3 amd64 4.1.6-5 [2427 kB] Get:214 http://localhost:3142/debian sid/main amd64 openmpi-bin amd64 4.1.6-5 [226 kB] Get:215 http://localhost:3142/debian sid/main arm64 libopenmpi-dev arm64 4.1.6-5 [972 kB] Get:216 http://localhost:3142/debian sid/main amd64 libpkgconf3 amd64 1.8.1-1+b2 [36.4 kB] Get:217 http://localhost:3142/debian sid/main arm64 libreadline8 arm64 8.2-3 [157 kB] Get:218 http://localhost:3142/debian sid/main arm64 libreadline-dev arm64 8.2-3 [153 kB] Get:219 http://localhost:3142/debian sid/main arm64 mpi-default-dev arm64 1.15 [3152 B] Get:220 http://localhost:3142/debian sid/main amd64 pkgconf-bin amd64 1.8.1-1+b2 [29.7 kB] Get:221 http://localhost:3142/debian sid/main arm64 pkgconf arm64 1.8.1-1+b2 [26.2 kB] Get:222 http://localhost:3142/debian sid/main arm64 pkg-config arm64 1.8.1-1+b2 [14.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 250 MB in 6s (44.0 MB/s) Selecting previously unselected package autoconf-archive. (Reading database ... 16261 files and directories currently installed.) Preparing to unpack .../000-autoconf-archive_20220903-3_all.deb ... Unpacking autoconf-archive (20220903-3) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../001-liblocale-gettext-perl_1.07-6+b1_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-6+b1) ... Selecting previously unselected package readline-common. Preparing to unpack .../002-readline-common_8.2-3_all.deb ... Unpacking readline-common (8.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../003-sensible-utils_0.0.20_all.deb ... Unpacking sensible-utils (0.0.20) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.45-2+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-2+b1) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../005-libmagic1_1%3a5.45-2+b1_amd64.deb ... Unpacking libmagic1:amd64 (1:5.45-2+b1) ... Selecting previously unselected package file. Preparing to unpack .../006-file_1%3a5.45-2+b1_amd64.deb ... Unpacking file (1:5.45-2+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../007-gettext-base_0.21-14_amd64.deb ... Unpacking gettext-base (0.21-14) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../008-libuchardet0_0.0.8-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../009-groff-base_1.23.0-3_amd64.deb ... Unpacking groff-base (1.23.0-3) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../010-bsdextrautils_2.39.3-6_amd64.deb ... Unpacking bsdextrautils (2.39.3-6) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../011-libpipeline1_1.5.7-1+b2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.7-1+b2) ... Selecting previously unselected package man-db. Preparing to unpack .../012-man-db_2.12.0-3_amd64.deb ... Unpacking man-db (2.12.0-3) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../013-libbsd0_0.11.8-1_amd64.deb ... Unpacking libbsd0:amd64 (0.11.8-1) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../014-libedit2_3.1-20230828-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20230828-1) ... Selecting previously unselected package libcbor0.10:amd64. Preparing to unpack .../015-libcbor0.10_0.10.2-1.1_amd64.deb ... Unpacking libcbor0.10:amd64 (0.10.2-1.1) ... Selecting previously unselected package libfido2-1:amd64. Preparing to unpack .../016-libfido2-1_1.14.0-1_amd64.deb ... Unpacking libfido2-1:amd64 (1.14.0-1) ... Selecting previously unselected package openssh-client. Preparing to unpack .../017-openssh-client_1%3a9.6p1-2_amd64.deb ... Unpacking openssh-client (1:9.6p1-2) ... 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Setting up gcc-13-aarch64-linux-gnu-base:amd64 (13.2.0-7cross2) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6.3) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libfido2-1:amd64 (1.14.0-1) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up libbsd0:amd64 (0.11.8-1) ... Setting up libdrm-common (2.4.117-1) ... Setting up libelf1:amd64 (0.190-1+b1) ... Setting up readline-common (8.2-3) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3+b2) ... Setting up liblocale-gettext-perl (1.07-6+b1) ... Setting up gcc-9-base:arm64 (9.5.0-4) ... Setting up libevent-pthreads-2.1-7:amd64 (2.1.12-stable-8) ... Setting up libgcc-s1-arm64-cross (13.2.0-7cross2) ... Setting up libatomic1-arm64-cross (13.2.0-7cross2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up liblsan0-arm64-cross (13.2.0-7cross2) ... Setting up libgomp1-arm64-cross (13.2.0-7cross2) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libxcb1:amd64 (1.15-1) ... Setting up gettext (0.21-14) ... Setting up cpp-13-aarch64-linux-gnu (13.2.0-7cross2) ... Setting up libtool (2.4.7-7) ... Setting up libedit2:amd64 (3.1-20230828-1) ... Setting up libhwasan0-arm64-cross (13.2.0-7cross2) ... Setting up libc6-dev-arm64-cross (2.37-12cross1) ... Setting up pkgconf:arm64 (1.8.1-1+b2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnl-route-3-200:amd64 (3.7.0-0.2+b1) ... Setting up libstdc++6-arm64-cross (13.2.0-7cross2) ... Setting up dh-autoreconf (20) ... Setting up cpp-aarch64-linux-gnu (4:13.2.0-2) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up pkg-config:arm64 (1.8.1-1+b2) ... Setting up ucf (3.0043+nmu1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.23.0-3) ... Setting up libx11-6:amd64 (2:1.8.7-1) ... Setting up libasan8-arm64-cross (13.2.0-7cross2) ... Setting up libtsan2-arm64-cross (13.2.0-7cross2) ... Setting up libibverbs1:amd64 (48.0-1) ... Setting up libubsan1-arm64-cross (13.2.0-7cross2) ... Setting up ibverbs-providers:amd64 (48.0-1) ... Setting up openssh-client (1:9.6p1-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up man-db (2.12.0-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxnvctrl0:amd64 (525.125.06-1) ... Setting up libgcc-13-dev-arm64-cross (13.2.0-7cross2) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up librdmacm1:amd64 (48.0-1) ... Setting up libucx0:amd64 (1.15.0-1) ... Setting up debhelper (13.11.9) ... Setting up gcc-13-aarch64-linux-gnu (13.2.0-7cross2) ... Setting up libhwloc-plugins:amd64 (2.10.0-1) ... Setting up libstdc++-13-dev-arm64-cross (13.2.0-7cross2) ... Setting up libxml-simple-perl (2.25-2) ... Setting up g++-13-aarch64-linux-gnu (13.2.0-7cross2) ... Setting up libfabric1:amd64 (1.17.0-3) ... Setting up gcc-aarch64-linux-gnu (4:13.2.0-2) ... Setting up libpmix2:amd64 (5.0.1-4) ... Setting up libopenmpi3:amd64 (4.1.6-5) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up g++-aarch64-linux-gnu (4:13.2.0-2) ... Setting up openmpi-bin (4.1.6-5) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-arm64 (12.10) ... Setting up libgcc-s1:arm64 (13.2.0-9) ... Setting up libc6:arm64 (2.37-13) ... Setting up libffi8:arm64 (3.4.4-2) ... Setting up libnuma1:arm64 (2.0.16-1) ... Setting up libdrm2:arm64 (2.4.117-1) ... Setting up libmd0:arm64 (1.1.0-2) ... Setting up ocl-icd-libopencl1:arm64 (2.3.2-1) ... Setting up libhwasan0:arm64 (13.2.0-9) ... Setting up libasan8:arm64 (13.2.0-9) ... Setting up libnl-3-200:arm64 (3.7.0-0.2+b1) ... Setting up libtsan2:arm64 (13.2.0-9) ... Setting up libbsd0:arm64 (0.11.8-1) ... Setting up libstdc++6:arm64 (13.2.0-9) ... Setting up liblsan0:arm64 (13.2.0-9) ... Setting up libitm1:arm64 (13.2.0-9) ... Setting up libtinfo6:arm64 (6.4+20231209-1) ... Setting up libdrm-amdgpu1:arm64 (2.4.117-1) ... Setting up libexpat1:arm64 (2.5.0-2+b2) ... Setting up libzstd1:arm64 (1.5.5+dfsg2-2) ... Setting up libxau6:arm64 (1:1.0.9-1) ... Setting up libxdmcp6:arm64 (1:1.1.2-3) ... Setting up libkeyutils1:arm64 (1.6.3-2+b2) ... Setting up libdrm-nouveau2:arm64 (2.4.117-1) ... Setting up libxcb1:arm64 (1.15-1) ... Setting up libicu72:arm64 (72.1-4) ... Setting up liblzma5:arm64 (5.4.5-0.3) ... Setting up libdrm-radeon1:arm64 (2.4.117-1) ... Setting up libedit2:arm64 (3.1-20230828-1) ... Setting up libreadline8:arm64 (8.2-3) ... Setting up libssl3:arm64 (3.1.4-2) ... Setting up zlib1g:arm64 (1:1.3.dfsg-3+b1) ... Setting up libcrypt1:arm64 (1:4.4.36-4) ... Setting up libcom-err2:arm64 (1.47.0-2+b1) ... Setting up libgomp1:arm64 (13.2.0-9) ... Setting up libcap2:arm64 (1:2.66-4+b2) ... Setting up libkrb5support0:arm64 (1.20.1-5) ... Setting up libnl-route-3-200:arm64 (3.7.0-0.2+b1) ... Setting up libz3-4:arm64 (4.8.12-3.1+b2) ... Setting up libmunge2:arm64 (0.5.15-3) ... Setting up libgmp10:arm64 (2:6.3.0+dfsg-2) ... Setting up libncurses6:arm64 (6.4+20231209-1) ... Setting up libevent-core-2.1-7:arm64 (2.1.12-stable-8) ... Setting up libatomic1:arm64 (13.2.0-9) ... Setting up libevent-2.1-7:arm64 (2.1.12-stable-8) ... Setting up libncursesw6:arm64 (6.4+20231209-1) ... Setting up libk5crypto3:arm64 (1.20.1-5) ... Setting up libltdl7:arm64 (2.4.7-7) ... Setting up libudev1:arm64 (255.2-4) ... Setting up libubsan1:arm64 (13.2.0-9) ... Setting up libnl-3-dev:arm64 (3.7.0-0.2+b1) ... Setting up libgcc-13-dev:arm64 (13.2.0-9) ... Setting up libcrypt-dev:arm64 (1:4.4.36-4) ... Setting up libx11-6:arm64 (2:1.8.7-1) ... Setting up libkrb5-3:arm64 (1.20.1-5) ... Setting up libisl23:arm64 (0.26-3+b2) ... Setting up libelf1:arm64 (0.190-1+b1) ... Setting up libxml2:arm64 (2.9.14+dfsg-1.3+b2) ... Setting up libcc1-0:arm64 (13.2.0-9) ... Setting up libevent-pthreads-2.1-7:arm64 (2.1.12-stable-8) ... Setting up libpciaccess0:arm64 (0.17-3) ... Setting up libibverbs1:arm64 (48.0-1) ... Setting up libevent-extra-2.1-7:arm64 (2.1.12-stable-8) ... Setting up ibverbs-providers:arm64 (48.0-1) ... Setting up libxext6:arm64 (2:1.3.4-1+b1) ... Setting up libevent-openssl-2.1-7:arm64 (2.1.12-stable-8) ... Setting up libxnvctrl0:arm64 (525.125.06-1) ... Setting up libnl-route-3-dev:arm64 (3.7.0-0.2+b1) ... Setting up libltdl-dev:arm64 (2.4.7-7) ... Setting up libmpfr6:arm64 (4.2.1-1) ... Setting up libevent-dev:arm64 (2.1.12-stable-8) ... Setting up libhwloc15:arm64 (2.10.0-1) ... Setting up libmpc3:arm64 (1.3.1-1+b2) ... Setting up libgssapi-krb5-2:arm64 (1.20.1-5) ... Setting up cpp-9:arm64 (9.5.0-4) ... Setting up libllvm17:arm64 (1:17.0.6-5) ... Setting up libllvmspirvlib17:arm64 (17.0.0-3) ... Setting up libtirpc3:arm64 (1.3.4+ds-1) ... Setting up librdmacm1:arm64 (48.0-1) ... Setting up libucx0:arm64 (1.15.0-1) ... Setting up libibverbs-dev:arm64 (48.0-1) ... Setting up libhwloc-plugins:arm64 (2.10.0-1) ... Setting up libtirpc-dev:arm64 (1.3.4+ds-1) ... Setting up libnsl2:arm64 (1.3.0-3) ... Setting up libclang-cpp17:arm64 (1:17.0.6-5) ... Setting up mesa-opencl-icd:arm64 (23.3.3-1) ... Setting up libfabric1:arm64 (1.17.0-3) ... Setting up libpmix2:arm64 (5.0.1-4) ... Setting up libopenmpi3:arm64 (4.1.6-5) ... Setting up libhmsbeagle1v5:arm64 (3.1.2+dfsg-13) ... Setting up libnsl-dev:arm64 (1.3.0-3) ... Setting up libc6-dev:arm64 (2.37-13) ... Setting up libstdc++-13-dev:arm64 (13.2.0-9) ... Setting up libhmsbeagle-dev:arm64 (3.1.2+dfsg-13) ... Setting up libncurses-dev:arm64 (6.4+20231209-1) ... Setting up libreadline-dev:arm64 (8.2-3) ... Setting up libnuma-dev:arm64 (2.0.16-1) ... Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3+b1) ... Setting up libflang-17-dev:arm64 (1:17.0.6-5) ... Setting up libhwloc-dev:arm64 (2.10.0-1) ... Setting up libpmix-dev:arm64 (5.0.1-4) ... Setting up flang-17:arm64 (1:17.0.6-5) ... Setting up libopenmpi-dev:arm64 (4.1.6-5) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/openmpi/include to provide /usr/include/aarch64-linux-gnu/mpi (mpi-aarch64-linux-gnu) in auto mode Setting up mpi-default-dev:arm64 (1.15) ... Setting up sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.37-13) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.55-1 (2023-09-29) amd64 (x86_64) Toolchain package versions: binutils_2.41.50.20231227-1 dpkg-dev_1.22.2 g++-11_11.4.0-7 g++-13_13.2.0-9 gcc-11_11.4.0-7 gcc-13_13.2.0-9 libc6-dev_2.37-13 libstdc++-11-dev_11.4.0-7 libstdc++-13-dev_13.2.0-9 libstdc++-13-dev-arm64-cross_13.2.0-7cross2 libstdc++6_13.2.0-9 libstdc++6-arm64-cross_13.2.0-7cross2 linux-libc-dev_6.6.11-1 Package versions: adduser_3.137 apt_2.7.9 autoconf_2.71-3 autoconf-archive_20220903-3 automake_1:1.16.5-1.3 autopoint_0.21-14 autotools-dev_20220109.1 base-files_13 base-passwd_3.6.3 bash_5.2.21-2 binutils_2.41.50.20231227-1 binutils-aarch64-linux-gnu_2.41.50.20231227-1 binutils-common_2.41.50.20231227-1 binutils-x86-64-linux-gnu_2.41.50.20231227-1 bsdextrautils_2.39.3-6 bsdutils_1:2.39.3-6 build-essential_12.10 bzip2_1.0.8-5+b2 coreutils_9.4-3+b1 cpp_4:13.2.0-2 cpp-11_11.4.0-7 cpp-13_13.2.0-9 cpp-13-aarch64-linux-gnu_13.2.0-7cross2 cpp-9_9.5.0-4 cpp-aarch64-linux-gnu_4:13.2.0-2 cross-config_2.6.20 crossbuild-essential-arm64_12.10 dash_0.5.12-6 debconf_1.5.83 debhelper_13.11.9 debian-archive-keyring_2023.4 debianutils_5.16 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dpkg_1.22.2 dpkg-cross_2.6.20 dpkg-dev_1.22.2 dwz_0.15-1 e2fsprogs_1.47.0-2+b1 fakeroot_1.32.2-1+b1 file_1:5.45-2+b1 findutils_4.9.0-5 flang-17_1:17.0.6-5 g++_4:13.2.0-2 g++-11_11.4.0-7 g++-13_13.2.0-9 g++-13-aarch64-linux-gnu_13.2.0-7cross2 g++-aarch64-linux-gnu_4:13.2.0-2 gcc_4:13.2.0-2 gcc-11_11.4.0-7 gcc-11-base_11.4.0-7 gcc-12-base_12.3.0-13 gcc-13_13.2.0-9 gcc-13-aarch64-linux-gnu_13.2.0-7cross2 gcc-13-aarch64-linux-gnu-base_13.2.0-7cross2 gcc-13-base_13.2.0-9 gcc-13-cross-base_13.2.0-7cross2 gcc-9-base_9.5.0-4 gcc-aarch64-linux-gnu_4:13.2.0-2 gettext_0.21-14 gettext-base_0.21-14 gpgv_2.2.40-1.1+b1 grep_3.11-4 groff-base_1.23.0-3 gzip_1.12-1 hostname_3.23+nmu2 ibverbs-providers_48.0-1 init-system-helpers_1.66 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-4 libapt-pkg6.0_2.7.9 libarchive-zip-perl_1.68-1 libasan6_11.4.0-7 libasan8_13.2.0-9 libasan8-arm64-cross_13.2.0-7cross2 libatomic1_13.2.0-9 libatomic1-arm64-cross_13.2.0-7cross2 libattr1_1:2.5.1-5 libaudit-common_1:3.1.2-1 libaudit1_1:3.1.2-1 libbinutils_2.41.50.20231227-1 libblkid1_2.39.3-6 libbsd0_0.11.8-1 libbz2-1.0_1.0.8-5+b2 libc-bin_2.37-13 libc-dev-bin_2.37-13 libc6_2.37-13 libc6-arm64-cross_2.37-12cross1 libc6-dev_2.37-13 libc6-dev-arm64-cross_2.37-12cross1 libcap-ng0_0.8.4-1 libcap2_1:2.66-4+b2 libcbor0.10_0.10.2-1.1 libcc1-0_13.2.0-9 libclang-common-17-dev_1:17.0.6-5 libclang-cpp17_1:17.0.6-5 libclc-17_1:17.0.6-5 libclc-17-dev_1:17.0.6-5 libcom-err2_1.47.0-2+b1 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-2 libcrypt-dev_1:4.4.36-4 libcrypt1_1:4.4.36-4 libctf-nobfd0_2.41.50.20231227-1 libctf0_2.41.50.20231227-1 libdb5.3_5.3.28+dfsg2-4+b1 libdebconfclient0_0.271 libdebhelper-perl_13.11.9 libdebian-dpkgcross-perl_2.6.20 libdpkg-perl_1.22.2 libdrm-amdgpu1_2.4.117-1 libdrm-common_2.4.117-1 libdrm-nouveau2_2.4.117-1 libdrm-radeon1_2.4.117-1 libdrm2_2.4.117-1 libedit2_3.1-20230828-1 libelf1_0.190-1+b1 libevent-2.1-7_2.1.12-stable-8 libevent-core-2.1-7_2.1.12-stable-8 libevent-dev_2.1.12-stable-8 libevent-extra-2.1-7_2.1.12-stable-8 libevent-openssl-2.1-7_2.1.12-stable-8 libevent-pthreads-2.1-7_2.1.12-stable-8 libexpat1_2.5.0-2+b2 libext2fs2_1.47.0-2+b1 libfabric1_1.17.0-3 libfakeroot_1.32.2-1+b1 libffi8_3.4.4-2 libfido2-1_1.14.0-1 libfile-find-rule-perl_0.34-3 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.13.1-1 libfile-which-perl_1.27-2 libflang-17-dev_1:17.0.6-5 libgcc-11-dev_11.4.0-7 libgcc-13-dev_13.2.0-9 libgcc-13-dev-arm64-cross_13.2.0-7cross2 libgcc-s1_13.2.0-9 libgcc-s1-arm64-cross_13.2.0-7cross2 libgcrypt20_1.10.3-2 libgdbm-compat4_1.23-5 libgdbm6_1.23-5 libgmp10_2:6.3.0+dfsg-2 libgnutls30_3.8.2-1 libgomp1_13.2.0-9 libgomp1-arm64-cross_13.2.0-7cross2 libgpg-error0_1.47-3 libgprofng0_2.41.50.20231227-1 libgssapi-krb5-2_1.20.1-5 libhmsbeagle-dev_3.1.2+dfsg-13 libhmsbeagle1v5_3.1.2+dfsg-13 libhogweed6_3.9.1-2 libhwasan0_13.2.0-9 libhwasan0-arm64-cross_13.2.0-7cross2 libhwloc-dev_2.10.0-1 libhwloc-plugins_2.10.0-1 libhwloc15_2.10.0-1 libibverbs-dev_48.0-1 libibverbs1_48.0-1 libicu72_72.1-4 libidn2-0_2.3.4-1+b2 libio-string-perl_1.08-4 libisl23_0.26-3+b2 libitm1_13.2.0-9 libitm1-arm64-cross_13.2.0-7cross2 libjansson4_2.14-2+b2 libjs-jquery_3.6.1+dfsg+~3.5.14-1 libjs-jquery-ui_1.13.2+dfsg-1 libk5crypto3_1.20.1-5 libkeyutils1_1.6.3-2+b2 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libpipeline1_1.5.7-1+b2 libpkgconf3_1.8.1-1+b2 libpmix-dev_5.0.1-4 libpmix2_5.0.1-4 libpsm-infinipath1_3.3+20.604758e7-6.3 libpsm2-2_11.2.185-2 libquadmath0_13.2.0-9 librdmacm1_48.0-1 libreadline-dev_8.2-3 libreadline8_8.2-3 libseccomp2_2.5.5-1 libselinux1_3.5-1+b2 libsemanage-common_3.5-1 libsemanage2_3.5-1+b2 libsepol2_3.5-2 libsframe1_2.41.50.20231227-1 libsmartcols1_2.39.3-6 libss2_1.47.0-2+b1 libssl3_3.1.4-2 libstdc++-11-dev_11.4.0-7 libstdc++-13-dev_13.2.0-9 libstdc++-13-dev-arm64-cross_13.2.0-7cross2 libstdc++6_13.2.0-9 libstdc++6-arm64-cross_13.2.0-7cross2 libsub-override-perl_0.10-1 libsystemd0_255.2-4 libtasn1-6_4.19.0-3+b2 libtext-glob-perl_0.11-3 libtinfo6_6.4+20231209-1 libtirpc-common_1.3.4+ds-1 libtirpc-dev_1.3.4+ds-1 libtirpc3_1.3.4+ds-1 libtool_2.4.7-7 libtsan0_11.4.0-7 libtsan2_13.2.0-9 libtsan2-arm64-cross_13.2.0-7cross2 libubsan1_13.2.0-9 libubsan1-arm64-cross_13.2.0-7cross2 libuchardet0_0.0.8-1 libucx0_1.15.0-1 libudev1_255.2-4 libunistring2_1.0-2 libunistring5_1.1-2 libuuid1_2.39.3-6 libx11-6_2:1.8.7-1 libx11-data_2:1.8.7-1 libxau6_1:1.0.9-1 libxcb1_1.15-1 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.4-1+b1 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b2 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-2 libxml2_2.9.14+dfsg-1.3+b2 libxnvctrl0_525.125.06-1 libxxhash0_0.8.2-2 libyaml-perl_1.31-1 libz3-4_4.8.12-3.1+b2 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.6.11-1 linux-libc-dev-arm64-cross_6.5.8-1cross1 login_1:4.13+dfsg1-3+b1 logsave_1.47.0-2+b1 m4_1.4.19-4 make_4.3-4.1 man-db_2.12.0-3 mawk_1.3.4.20231126-1 mesa-opencl-icd_23.3.3-1 mount_2.39.3-6 mpi-default-dev_1.15 ncurses-base_6.4+20231209-1 ncurses-bin_6.4+20231209-1 ocl-icd-libopencl1_2.3.2-1 openmpi-bin_4.1.6-5 openmpi-common_4.1.6-5 openssh-client_1:9.6p1-2 passwd_1:4.13+dfsg1-3+b1 patch_2.7.6-7 perl_5.38.2-3 perl-base_5.38.2-3 perl-modules-5.34_5.34.0-5 perl-modules-5.38_5.38.2-3 pkg-config_1.8.1-1+b2 pkgconf_1.8.1-1+b2 pkgconf-bin_1.8.1-1+b2 po-debconf_1.0.21+nmu1 readline-common_8.2-3 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.20 sysvinit-utils_3.08-5 tar_1.35+dfsg-3 tzdata_2023d-1 ucf_3.0043+nmu1 usrmerge_38 util-linux_2.39.3-6 util-linux-extra_2.39.3-6 xz-utils_5.4.5-0.3 zlib1g_1:1.3.dfsg-3+b1 zlib1g-dev_1:1.3.dfsg-3+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: mrbayes Binary: mrbayes, mrbayes-mpi, mrbayes-doc Architecture: any all Version: 3.2.7a-7 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Andreas Tille Homepage: http://mrbayes.csit.fsu.edu/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/mrbayes Vcs-Git: https://salsa.debian.org/med-team/mrbayes.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), libreadline-dev, mpi-default-dev, libhmsbeagle-dev, autoconf-archive, pkg-config Package-List: mrbayes deb science optional arch=any mrbayes-doc deb doc optional arch=all mrbayes-mpi deb science optional arch=any Checksums-Sha1: 3073ebd54fe7f4e8db88918f061b2856ee4bf0d9 9819346 mrbayes_3.2.7a.orig.tar.gz 99911ffc510775938111912889d2da7745b83cc9 7380 mrbayes_3.2.7a-7.debian.tar.xz Checksums-Sha256: 3eed2e3b1d9e46f265b6067a502a89732b6f430585d258b886e008e846ecc5c6 9819346 mrbayes_3.2.7a.orig.tar.gz 58f4e433e222389b50b62dbb92ed4667c7c5ed19c258b3802f1bbe1da988aa84 7380 mrbayes_3.2.7a-7.debian.tar.xz Files: 504236626ce9a2de1066a8520672f0cc 9819346 mrbayes_3.2.7a.orig.tar.gz 3a68c8efba2dcdf1502e2378ed7ff21b 7380 mrbayes_3.2.7a-7.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmWj540RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtG/kQ/9G3rB+YHqnesvCJ0pA6E8mJ8v2Q0DSiTF 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dpkg-source: info: extracting mrbayes in /<> dpkg-source: info: unpacking mrbayes_3.2.7a.orig.tar.gz dpkg-source: info: unpacking mrbayes_3.2.7a-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying no_rpath.patch dpkg-source: info: applying autoreconf.patch dpkg-source: info: applying no_baseline_violation.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.arm64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.iQEHx1XZtM/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-d748d7e5-6496-4d91-bcfb-27b7a2fc38ce SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa XDG_SESSION_CLASS=user dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aarm64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package mrbayes dpkg-buildpackage: info: source version 3.2.7a-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type aarch64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a cp: warning: behavior of -n is non-portable and may change in future; use --update=none instead cp: warning: behavior of -n is non-portable and may change in future; use --update=none instead dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- --with-beagle=/usr --enable-mpi=yes --enable-debug=yes ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=aarch64-linux-gnu --with-beagle=/usr --enable-mpi=yes --enable-debug=yes configure: loading site script /etc/dpkg-cross/cross-config.arm64 Reading Cross Config Cache (/etc/dpkg-cross/cross-config.arm64) Reading /etc/dpkg-cross/cross-config.cache checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for aarch64-linux-gnu-strip... aarch64-linux-gnu-strip checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking build system type... x86_64-pc-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking for aarch64-linux-gnu-pkg-config... /usr/bin/aarch64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for pdflatex... no checking for bibtex... no configure: WARNING: pdflatex or bibtex is missing, documentation will not be rebuilt checking whether make supports the include directive... yes (GNU style) checking whether to compile using MPI... no checking for aarch64-linux-gnu-gcc... aarch64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether aarch64-linux-gnu-gcc accepts -g... yes checking for aarch64-linux-gnu-gcc option to enable C11 features... unsupported checking for aarch64-linux-gnu-gcc option to enable C99 features... none needed checking whether aarch64-linux-gnu-gcc understands -c and -o together... yes checking dependency style of aarch64-linux-gnu-gcc... none checking for sqrt in -lm... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes configure: Trying to locate Beagle (hmsbeagle-1) in '/usr' checking for libhmsbeagle/beagle.h... yes checking for beagleCreateInstance in -lhmsbeagle... yes configure: Found Beagle in '/usr' checking for beagleSetCPUThreadCount in -lhmsbeagle... yes configure: Using BEAGLE_CFLAGS="-I/usr/include/libhmsbeagle-1 -pthread" configure: Using BEAGLE_LIBS="-L/usr/lib -lhmsbeagle" checking for a readline compatible library... -lreadline checking for readline.h... no checking for readline/readline.h... yes checking whether readline supports history... yes checking for history.h... no checking for readline/history.h... yes checking for float.h... yes checking for limits.h... yes checking for memory.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for size_t... yes checking for _Bool... yes checking for stdbool.h that conforms to C99... yes checking for C compiler vendor... gnu checking for a sed that does not truncate output... /usr/bin/sed checking for C compiler version... 13.2.0 checking CFLAGS for most reasonable warnings... -Wall checking for floor... yes checking for memset... yes checking for pow... yes checking for sqrt... yes checking for strchr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/manual/Makefile config.status: creating doc/tutorial/Makefile config.status: creating examples/Makefile config.status: creating src/Makefile config.status: creating src/config.h config.status: executing depfiles commands make[1]: Leaving directory '/<>' debian/rules override_dh_auto_build make[1]: Entering directory '/<>' # build mb-mpi (from initial config) LIBS="-Wl,--as-needed" dh_auto_build make -j1 make[2]: Entering directory '/<>' Making all in src make[3]: Entering directory '/<>/src' make all-am make[4]: Entering directory '/<>/src' aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-bayes.o `test -f 'bayes.c' || echo './'`bayes.c aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-best.o `test -f 'best.c' || echo './'`best.c aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-command.o `test -f 'command.c' || echo './'`command.c command.c: In function ‘DoExecute’: command.c:3560:5: warning: ‘__builtin_strncpy’ output may be truncated copying 98 bytes from a string of length 99 [-Wstringop-truncation] 3560 | strncpy (exeFileName, inputFileName, 98); | ^ aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-likelihood.o `test -f 'likelihood.c' || echo './'`likelihood.c aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-mbbeagle.o `test -f 'mbbeagle.c' || echo './'`mbbeagle.c aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-mcmc.o `test -f 'mcmc.c' || echo './'`mcmc.c mcmc.c: In function ‘ReopenMBPrintFiles’: mcmc.c:15467:50: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size between 2 and 110 [-Wformat-overflow=] 15467 | sprintf (fileName, "%s.tree%d.run%d.t", localFileName, i+1, n+1); | ^~ mcmc.c:15467:36: note: directive argument in the range [1, 2147483647] 15467 | sprintf (fileName, "%s.tree%d.run%d.t", localFileName, i+1, n+1); | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/stdio.h:906, from bayes.h:32, from mcmc.c:45: In function ‘sprintf’, inlined from ‘ReopenMBPrintFiles’ at mcmc.c:15467:17: /usr/aarch64-linux-gnu/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 14 and 131 bytes into a destination of size 120 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ mcmc.c: In function ‘RunChain’: mcmc.c:17362:46: warning: ‘.ss’ directive writing 3 bytes into a region of size between 1 and 220 [-Wformat-overflow=] 17362 | sprintf (bkupFileName,"%s.ss%d", ckpFileName,chainParams.numStepsSS-stepIndexSS); | ^~~ In function ‘sprintf’, inlined from ‘RunChain’ at mcmc.c:17362:21: /usr/aarch64-linux-gnu/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 5 and 234 bytes into a destination of size 220 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-model.o `test -f 'model.c' || echo './'`model.c model.c: In function ‘SetModelParams’: model.c:19111:48: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 19111 | sprintf (tempMult, "g_m{%d}", i+1); | ^ In file included from /usr/aarch64-linux-gnu/include/stdio.h:906, from bayes.h:32, from model.c:38: In function ‘sprintf’, inlined from ‘SetModelParams’ at model.c:19111:21: /usr/aarch64-linux-gnu/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 7 and 16 bytes into a destination of size 15 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-proposal.o `test -f 'proposal.c' || echo './'`proposal.c aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-sumpt.o `test -f 'sumpt.c' || echo './'`sumpt.c sumpt.c: In function ‘DoSump’: sumpt.c:335:5: warning: ‘__builtin_strncpy’ output may be truncated copying 90 bytes from a string of length 119 [-Wstringop-truncation] 335 | strncpy (temp, sumpParams.sumpOutfile, 90); | ^ sumpt.c: In function ‘DoCompRefTree’: sumpt.c:4612:40: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size between 7 and 126 [-Wformat-overflow=] 4612 | sprintf (inRefName, "%s.run%d.t", comptreeParams.comptFileName2, n+1); | ^~ sumpt.c:4612:33: note: directive argument in the range [1, 2147483647] 4612 | sprintf (inRefName, "%s.run%d.t", comptreeParams.comptFileName2, n+1); | ^~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/stdio.h:906, from bayes.h:32, from sumpt.c:38: In function ‘sprintf’, inlined from ‘DoCompRefTree’ at sumpt.c:4612:13: /usr/aarch64-linux-gnu/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 8 and 136 bytes into a destination of size 130 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In function ‘sprintf’, inlined from ‘ShowConTree’ at sumpt.c:8173:21: /usr/aarch64-linux-gnu/include/bits/stdio2.h:30:10: warning: ‘__builtin_sprintf’ argument 3 may overlap destination object ‘printLine’ [-Wrestrict] 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ sumpt.c: In function ‘DoSumt’: sumpt.c:4958:39: warning: ‘.run’ directive writing 4 bytes into a region of size between 1 and 120 [-Wformat-overflow=] 4958 | sprintf (tempName, "%s.run%d.t", fileName, sumtParams.runId+1); | ^~~~ sumpt.c:4958:36: note: directive argument in the range [-2147483647, 2147483647] 4958 | sprintf (tempName, "%s.run%d.t", fileName, sumtParams.runId+1); | ^~~~~~~~~~~~ In function ‘sprintf’, inlined from ‘DoSumt’ at sumpt.c:4958:17: /usr/aarch64-linux-gnu/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 8 and 137 bytes into a destination of size 120 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ sumpt.c: In function ‘DoSumt’: sumpt.c:4956:39: warning: ‘.t’ directive writing 2 bytes into a region of size between 1 and 120 [-Wformat-overflow=] 4956 | sprintf (tempName, "%s.t", fileName); | ^~ In function ‘sprintf’, inlined from ‘DoSumt’ at sumpt.c:4956:17: /usr/aarch64-linux-gnu/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 3 and 122 bytes into a destination of size 120 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-utils.o `test -f 'utils.c' || echo './'`utils.c In file included from /usr/aarch64-linux-gnu/include/string.h:535, from /usr/aarch64-linux-gnu/include/memory.h:29, from bayes.h:31, from utils.c:38: In function ‘strncpy’, inlined from ‘CopyResults’ at utils.c:311:9: /usr/aarch64-linux-gnu/include/bits/string_fortified.h:95:10: warning: ‘__builtin_strncpy’ accessing between 0 and 2147483647 bytes at offsets [-2147483636, 2147483649] and 0 may overlap up to 11 bytes at offset [0, 10] [-Wrestrict] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘CopyProcessSsFile’ at utils.c:350:9: /usr/aarch64-linux-gnu/include/bits/string_fortified.h:95:10: warning: ‘__builtin_strncpy’ accessing between 0 and 2147483647 bytes at offsets [-2147483636, 2147483649] and 0 may overlap up to 11 bytes at offset [0, 10] [-Wrestrict] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘CopyTreeResults’ at utils.c:422:9: /usr/aarch64-linux-gnu/include/bits/string_fortified.h:95:10: warning: ‘__builtin_strncpy’ accessing between 0 and 2147483647 bytes at offsets [-2147483636, 2147483649] and 0 may overlap up to 11 bytes at offset [0, 10] [-Wrestrict] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro -Wl,-z,now -o mb mb-bayes.o mb-best.o mb-command.o mb-likelihood.o mb-mbbeagle.o mb-mcmc.o mb-model.o mb-proposal.o mb-sumpt.o mb-utils.o -L/usr/lib -lhmsbeagle -lm -lreadline make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making all in doc make[3]: Entering directory '/<>/doc' Making all in manual make[4]: Entering directory '/<>/doc/manual' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/doc/manual' Making all in tutorial make[4]: Entering directory '/<>/doc/tutorial' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/doc/tutorial' make[4]: Entering directory '/<>/doc' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/<>/doc' make[3]: Leaving directory '/<>/doc' Making all in examples make[3]: Entering directory '/<>/examples' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/examples' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' mv src/mb ./mb-mpi # Now - build mb ( cd src ; make clean ) make[2]: Entering directory '/<>/src' test -z "mb" || rm -f mb rm -f *.o make[2]: Leaving directory '/<>/src' dh_auto_configure -- --with-beagle=/usr --enable-mpi=no --enable-debug=yes ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=aarch64-linux-gnu --with-beagle=/usr --enable-mpi=no --enable-debug=yes configure: loading site script /etc/dpkg-cross/cross-config.arm64 Reading Cross Config Cache (/etc/dpkg-cross/cross-config.arm64) Reading /etc/dpkg-cross/cross-config.cache checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for aarch64-linux-gnu-strip... aarch64-linux-gnu-strip checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking build system type... x86_64-pc-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking for aarch64-linux-gnu-pkg-config... /usr/bin/aarch64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for pdflatex... no checking for bibtex... no configure: WARNING: pdflatex or bibtex is missing, documentation will not be rebuilt checking whether make supports the include directive... yes (GNU style) checking whether to compile using MPI... no checking for aarch64-linux-gnu-gcc... aarch64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether aarch64-linux-gnu-gcc accepts -g... yes checking for aarch64-linux-gnu-gcc option to enable C11 features... unsupported checking for aarch64-linux-gnu-gcc option to enable C99 features... none needed checking whether aarch64-linux-gnu-gcc understands -c and -o together... yes checking dependency style of aarch64-linux-gnu-gcc... none checking for sqrt in -lm... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes configure: Trying to locate Beagle (hmsbeagle-1) in '/usr' checking for libhmsbeagle/beagle.h... yes checking for beagleCreateInstance in -lhmsbeagle... yes configure: Found Beagle in '/usr' checking for beagleSetCPUThreadCount in -lhmsbeagle... yes configure: Using BEAGLE_CFLAGS="-I/usr/include/libhmsbeagle-1 -pthread" configure: Using BEAGLE_LIBS="-L/usr/lib -lhmsbeagle" checking for a readline compatible library... -lreadline checking for readline.h... no checking for readline/readline.h... yes checking whether readline supports history... yes checking for history.h... no checking for readline/history.h... yes checking for float.h... yes checking for limits.h... yes checking for memory.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for size_t... yes checking for _Bool... yes checking for stdbool.h that conforms to C99... yes checking for C compiler vendor... gnu checking for a sed that does not truncate output... /usr/bin/sed checking for C compiler version... 13.2.0 checking CFLAGS for most reasonable warnings... -Wall checking for floor... yes checking for memset... yes checking for pow... yes checking for sqrt... yes checking for strchr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/manual/Makefile config.status: creating doc/tutorial/Makefile config.status: creating examples/Makefile config.status: creating src/Makefile config.status: creating src/config.h config.status: src/config.h is unchanged config.status: executing depfiles commands LIBS="-Wl,--as-needed" dh_auto_build make -j1 make[2]: Entering directory '/<>' Making all in src make[3]: Entering directory '/<>/src' make all-am make[4]: Entering directory '/<>/src' aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-bayes.o `test -f 'bayes.c' || echo './'`bayes.c aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-best.o `test -f 'best.c' || echo './'`best.c aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-command.o `test -f 'command.c' || echo './'`command.c command.c: In function ‘DoExecute’: command.c:3560:5: warning: ‘__builtin_strncpy’ output may be truncated copying 98 bytes from a string of length 99 [-Wstringop-truncation] 3560 | strncpy (exeFileName, inputFileName, 98); | ^ aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-likelihood.o `test -f 'likelihood.c' || echo './'`likelihood.c aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-mbbeagle.o `test -f 'mbbeagle.c' || echo './'`mbbeagle.c aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-mcmc.o `test -f 'mcmc.c' || echo './'`mcmc.c mcmc.c: In function ‘ReopenMBPrintFiles’: mcmc.c:15467:50: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size between 2 and 110 [-Wformat-overflow=] 15467 | sprintf (fileName, "%s.tree%d.run%d.t", localFileName, i+1, n+1); | ^~ mcmc.c:15467:36: note: directive argument in the range [1, 2147483647] 15467 | sprintf (fileName, "%s.tree%d.run%d.t", localFileName, i+1, n+1); | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/stdio.h:906, from bayes.h:32, from mcmc.c:45: In function ‘sprintf’, inlined from ‘ReopenMBPrintFiles’ at mcmc.c:15467:17: /usr/aarch64-linux-gnu/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 14 and 131 bytes into a destination of size 120 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ mcmc.c: In function ‘RunChain’: mcmc.c:17362:46: warning: ‘.ss’ directive writing 3 bytes into a region of size between 1 and 220 [-Wformat-overflow=] 17362 | sprintf (bkupFileName,"%s.ss%d", ckpFileName,chainParams.numStepsSS-stepIndexSS); | ^~~ In function ‘sprintf’, inlined from ‘RunChain’ at mcmc.c:17362:21: /usr/aarch64-linux-gnu/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 5 and 234 bytes into a destination of size 220 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-model.o `test -f 'model.c' || echo './'`model.c model.c: In function ‘SetModelParams’: model.c:19111:48: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 19111 | sprintf (tempMult, "g_m{%d}", i+1); | ^ In file included from /usr/aarch64-linux-gnu/include/stdio.h:906, from bayes.h:32, from model.c:38: In function ‘sprintf’, inlined from ‘SetModelParams’ at model.c:19111:21: /usr/aarch64-linux-gnu/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 7 and 16 bytes into a destination of size 15 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-proposal.o `test -f 'proposal.c' || echo './'`proposal.c aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-sumpt.o `test -f 'sumpt.c' || echo './'`sumpt.c sumpt.c: In function ‘DoSump’: sumpt.c:335:5: warning: ‘__builtin_strncpy’ output may be truncated copying 90 bytes from a string of length 119 [-Wstringop-truncation] 335 | strncpy (temp, sumpParams.sumpOutfile, 90); | ^ sumpt.c: In function ‘DoCompRefTree’: sumpt.c:4612:40: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size between 7 and 126 [-Wformat-overflow=] 4612 | sprintf (inRefName, "%s.run%d.t", comptreeParams.comptFileName2, n+1); | ^~ sumpt.c:4612:33: note: directive argument in the range [1, 2147483647] 4612 | sprintf (inRefName, "%s.run%d.t", comptreeParams.comptFileName2, n+1); | ^~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/stdio.h:906, from bayes.h:32, from sumpt.c:38: In function ‘sprintf’, inlined from ‘DoCompRefTree’ at sumpt.c:4612:13: /usr/aarch64-linux-gnu/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 8 and 136 bytes into a destination of size 130 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In function ‘sprintf’, inlined from ‘ShowConTree’ at sumpt.c:8173:21: /usr/aarch64-linux-gnu/include/bits/stdio2.h:30:10: warning: ‘__builtin_sprintf’ argument 3 may overlap destination object ‘printLine’ [-Wrestrict] 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ sumpt.c: In function ‘DoSumt’: sumpt.c:4958:39: warning: ‘.run’ directive writing 4 bytes into a region of size between 1 and 120 [-Wformat-overflow=] 4958 | sprintf (tempName, "%s.run%d.t", fileName, sumtParams.runId+1); | ^~~~ sumpt.c:4958:36: note: directive argument in the range [-2147483647, 2147483647] 4958 | sprintf (tempName, "%s.run%d.t", fileName, sumtParams.runId+1); | ^~~~~~~~~~~~ In function ‘sprintf’, inlined from ‘DoSumt’ at sumpt.c:4958:17: /usr/aarch64-linux-gnu/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 8 and 137 bytes into a destination of size 120 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ sumpt.c: In function ‘DoSumt’: sumpt.c:4956:39: warning: ‘.t’ directive writing 2 bytes into a region of size between 1 and 120 [-Wformat-overflow=] 4956 | sprintf (tempName, "%s.t", fileName); | ^~ In function ‘sprintf’, inlined from ‘DoSumt’ at sumpt.c:4956:17: /usr/aarch64-linux-gnu/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 3 and 122 bytes into a destination of size 120 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mb-utils.o `test -f 'utils.c' || echo './'`utils.c In file included from /usr/aarch64-linux-gnu/include/string.h:535, from /usr/aarch64-linux-gnu/include/memory.h:29, from bayes.h:31, from utils.c:38: In function ‘strncpy’, inlined from ‘CopyResults’ at utils.c:311:9: /usr/aarch64-linux-gnu/include/bits/string_fortified.h:95:10: warning: ‘__builtin_strncpy’ accessing between 0 and 2147483647 bytes at offsets [-2147483636, 2147483649] and 0 may overlap up to 11 bytes at offset [0, 10] [-Wrestrict] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘CopyProcessSsFile’ at utils.c:350:9: /usr/aarch64-linux-gnu/include/bits/string_fortified.h:95:10: warning: ‘__builtin_strncpy’ accessing between 0 and 2147483647 bytes at offsets [-2147483636, 2147483649] and 0 may overlap up to 11 bytes at offset [0, 10] [-Wrestrict] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘CopyTreeResults’ at utils.c:422:9: /usr/aarch64-linux-gnu/include/bits/string_fortified.h:95:10: warning: ‘__builtin_strncpy’ accessing between 0 and 2147483647 bytes at offsets [-2147483636, 2147483649] and 0 may overlap up to 11 bytes at offset [0, 10] [-Wrestrict] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro -Wl,-z,now -o mb mb-bayes.o mb-best.o mb-command.o mb-likelihood.o mb-mbbeagle.o mb-mcmc.o mb-model.o mb-proposal.o mb-sumpt.o mb-utils.o -L/usr/lib -lhmsbeagle -lm -lreadline make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making all in doc make[3]: Entering directory '/<>/doc' Making all in manual make[4]: Entering directory '/<>/doc/manual' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/doc/manual' Making all in tutorial make[4]: Entering directory '/<>/doc/tutorial' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/doc/tutorial' make[4]: Entering directory '/<>/doc' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/<>/doc' make[3]: Leaving directory '/<>/doc' Making all in examples make[3]: Entering directory '/<>/examples' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/examples' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' mv src/mb . make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in src make[2]: Entering directory '/<>/src' aarch64-linux-gnu-gcc -I/usr/include/libhmsbeagle-1 -pthread -Wall -g -std=c99 -pedantic -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro -Wl,-z,now -o mb mb-bayes.o mb-best.o mb-command.o mb-likelihood.o mb-mbbeagle.o mb-mcmc.o mb-model.o mb-proposal.o mb-sumpt.o mb-utils.o -L/usr/lib -lhmsbeagle -lm -lreadline make[3]: Entering directory '/<>/src' /usr/bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/install -c mb '/<>/debian/tmp/usr/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' Making install in doc make[2]: Entering directory '/<>/doc' Making install in manual make[3]: Entering directory '/<>/doc/manual' make[4]: Entering directory '/<>/doc/manual' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/doc/mrbayes' /usr/bin/install -c -m 644 Manual_MrBayes_v3.2.pdf '/<>/debian/tmp/usr/share/doc/mrbayes' make[4]: Leaving directory '/<>/doc/manual' make[3]: Leaving directory '/<>/doc/manual' Making install in tutorial make[3]: Entering directory '/<>/doc/tutorial' make[4]: Entering directory '/<>/doc/tutorial' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/doc/mrbayes' /usr/bin/install -c -m 644 hym.nex '/<>/debian/tmp/usr/share/doc/mrbayes' /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/doc/mrbayes' /usr/bin/install -c -m 644 MBDating.pdf '/<>/debian/tmp/usr/share/doc/mrbayes' make[4]: Leaving directory '/<>/doc/tutorial' make[3]: Leaving directory '/<>/doc/tutorial' make[3]: Entering directory '/<>/doc' make[4]: Entering directory '/<>/doc' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/doc' make[3]: Leaving directory '/<>/doc' make[2]: Leaving directory '/<>/doc' Making install in examples make[2]: Entering directory '/<>/examples' make[3]: Entering directory '/<>/examples' make[3]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/examples/mrbayes' /usr/bin/install -c -m 644 avian_ovomucoids.nex codon.nex cynmix.nex finch.nex hymfossil.nex primates.nex replicase.nex sceloporus.nex '/<>/debian/tmp/usr/share/examples/mrbayes' make[3]: Leaving directory '/<>/examples' make[2]: Leaving directory '/<>/examples' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/doc/mrbayes' /usr/bin/install -c -m 644 COPYING README NEWS '/<>/debian/tmp/usr/share/doc/mrbayes' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_install -a dh_installdocs -a dh_installchangelogs -a debian/rules override_dh_installexamples make[1]: Entering directory '/<>' dh_installexamples find debian -name "Makefile*" -delete make[1]: Leaving directory '/<>' dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a debian/rules override_dh_compress make[1]: Entering directory '/<>' dh_compress --exclude=.pdf make[1]: Leaving directory '/<>' dh_fixperms -a debian/rules override_dh_missing make[1]: Entering directory '/<>' dh_missing --list-missing dh_missing: warning: usr/bin/mb exists in debian/tmp but is not installed to anywhere (related file: "mb") dh_missing: warning: usr/share/doc/mrbayes/COPYING exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/mrbayes/MBDating.pdf exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/mrbayes/Manual_MrBayes_v3.2.pdf exists in debian/tmp but is not installed to anywhere (related file: "doc/manual/Manual_MrBayes_v3.2.pdf") dh_missing: warning: usr/share/doc/mrbayes/NEWS exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/mrbayes/README exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/mrbayes/hym.nex exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/examples/mrbayes/avian_ovomucoids.nex exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/examples/mrbayes/codon.nex exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/examples/mrbayes/cynmix.nex exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/examples/mrbayes/finch.nex exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/examples/mrbayes/hymfossil.nex exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/examples/mrbayes/primates.nex exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/examples/mrbayes/replicase.nex exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/examples/mrbayes/sceloporus.nex exists in debian/tmp but is not installed to anywhere While detecting missing files, dh_missing noted some files with a similar name to those that were missing. This warning /might/ be resolved by replacing references to the missing files with the similarly named ones that dh_missing found - assuming the content is identical. As an example, you might want to replace: * mb with: * usr/bin/mb in a file in debian/ or as argument to one of the dh_* tools called from debian/rules. (Note it is possible the paths are not used verbatim but instead directories containing or globs matching them are used instead) Alternatively, add the missing file to debian/not-installed if it cannot and should not be used. The following debhelper tools have reported what they installed (with files per package) * dh_install: mrbayes (1), mrbayes-doc (1), mrbayes-mpi (2) * dh_installdocs: mrbayes (3), mrbayes-doc (0), mrbayes-mpi (0) * dh_installexamples: mrbayes (0), mrbayes-doc (0), mrbayes-mpi (0) * dh_installman: mrbayes (1), mrbayes-doc (0), mrbayes-mpi (1) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.md.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. make[1]: Leaving directory '/<>' dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a debian/rules override_dh_installdeb make[1]: Entering directory '/<>' # FIXME: That's a dirty hack by simply removing debug information in mrbayes-mpi-dbgsym # Due to the duplicated build above this is just a duplicate of mrbayes-dbgsym and creates a file conflict if [ -d debian/.debhelper/mrbayes-mpi/dbgsym-root/usr/lib/debug ] ; then \ find debian/.debhelper/mrbayes-mpi/dbgsym-root/usr/lib/debug -name "*.debug" -delete ; \ fi dh_installdeb make[1]: Leaving directory '/<>' dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'mrbayes' in '../mrbayes_3.2.7a-7_arm64.deb'. dpkg-deb: building package 'mrbayes-dbgsym' in '../mrbayes-dbgsym_3.2.7a-7_arm64.deb'. dpkg-deb: building package 'mrbayes-mpi' in '../mrbayes-mpi_3.2.7a-7_arm64.deb'. dpkg-deb: building package 'mrbayes-mpi-dbgsym' in '../mrbayes-mpi-dbgsym_3.2.7a-7_arm64.deb'. dpkg-genbuildinfo --build=any -O../mrbayes_3.2.7a-7_arm64.buildinfo dpkg-genchanges --build=any -O../mrbayes_3.2.7a-7_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2024-01-15T20:14:34Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ mrbayes_3.2.7a-7_arm64.changes: ------------------------------- Format: 1.8 Date: Sun, 14 Jan 2024 14:35:17 +0100 Source: mrbayes Binary: mrbayes mrbayes-dbgsym mrbayes-mpi mrbayes-mpi-dbgsym Built-For-Profiles: cross nocheck Architecture: arm64 Version: 3.2.7a-7 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: mrbayes - Bayesian Inference of Phylogeny mrbayes-mpi - Bayesian Inference of Phylogeny - mpi version Closes: 1045400 1049739 Changes: mrbayes (3.2.7a-7) unstable; urgency=medium . * Fix clean target Closes: #1045400, #1049739 * Standards-Version: 4.6.2 (routine-update) * Remove trailing whitespace in debian/changelog (routine-update) Checksums-Sha1: b4e93a533396633c9722bbfb95ea3c51647dc294 1058272 mrbayes-dbgsym_3.2.7a-7_arm64.deb ecfe14546d5e81c2dafb4eb0d9345b30e3087335 972 mrbayes-mpi-dbgsym_3.2.7a-7_arm64.deb 0bdc5d7b865890a6b27445f25a72f4976790b08a 536484 mrbayes-mpi_3.2.7a-7_arm64.deb 9d49779e3fbcc70ce15040c91ec3bd923d2af451 8474 mrbayes_3.2.7a-7_arm64.buildinfo 0f5bc4cecedab143ec7ac2eff8b7c38ab3929e5d 599352 mrbayes_3.2.7a-7_arm64.deb Checksums-Sha256: 9c57e4801d294d51ccf3ebe0cadcfa75f11ff53431f50b021caa590c0834c2a8 1058272 mrbayes-dbgsym_3.2.7a-7_arm64.deb cb6e3ee71e5537d87589c4716f72696fdb3a3de0ba3118ffb7bb201418bf37f8 972 mrbayes-mpi-dbgsym_3.2.7a-7_arm64.deb 15783402f087eb99cf574ad895c17cb418ba567fbc9c3d2d37ae0aa9cbea5c2e 536484 mrbayes-mpi_3.2.7a-7_arm64.deb db88a2bd830f34a5d9a068e6343cc5b59ca8f7e1013c57a284ea1aefa39f5661 8474 mrbayes_3.2.7a-7_arm64.buildinfo 5775e7b32a191f67d394be1aa7dd71b4c884b515da95cd2e6e8d7646be5ffba5 599352 mrbayes_3.2.7a-7_arm64.deb Files: a42a87241ff15e91f818cc666bf1a345 1058272 debug optional mrbayes-dbgsym_3.2.7a-7_arm64.deb e14141a733467146d8d55c94d8d3f07e 972 debug optional mrbayes-mpi-dbgsym_3.2.7a-7_arm64.deb cfef1a40d8749a9bc4d645f9b5e8c66b 536484 science optional mrbayes-mpi_3.2.7a-7_arm64.deb 2a61b6b727c6ff6fbe75541b9e1b15e7 8474 science optional mrbayes_3.2.7a-7_arm64.buildinfo 4924a237ff353b3bd6f2f6cd1405e6a6 599352 science optional mrbayes_3.2.7a-7_arm64.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: mrbayes Binary: mrbayes mrbayes-dbgsym mrbayes-mpi mrbayes-mpi-dbgsym Architecture: arm64 Version: 3.2.7a-7 Checksums-Md5: a42a87241ff15e91f818cc666bf1a345 1058272 mrbayes-dbgsym_3.2.7a-7_arm64.deb e14141a733467146d8d55c94d8d3f07e 972 mrbayes-mpi-dbgsym_3.2.7a-7_arm64.deb cfef1a40d8749a9bc4d645f9b5e8c66b 536484 mrbayes-mpi_3.2.7a-7_arm64.deb 4924a237ff353b3bd6f2f6cd1405e6a6 599352 mrbayes_3.2.7a-7_arm64.deb Checksums-Sha1: b4e93a533396633c9722bbfb95ea3c51647dc294 1058272 mrbayes-dbgsym_3.2.7a-7_arm64.deb ecfe14546d5e81c2dafb4eb0d9345b30e3087335 972 mrbayes-mpi-dbgsym_3.2.7a-7_arm64.deb 0bdc5d7b865890a6b27445f25a72f4976790b08a 536484 mrbayes-mpi_3.2.7a-7_arm64.deb 0f5bc4cecedab143ec7ac2eff8b7c38ab3929e5d 599352 mrbayes_3.2.7a-7_arm64.deb Checksums-Sha256: 9c57e4801d294d51ccf3ebe0cadcfa75f11ff53431f50b021caa590c0834c2a8 1058272 mrbayes-dbgsym_3.2.7a-7_arm64.deb cb6e3ee71e5537d87589c4716f72696fdb3a3de0ba3118ffb7bb201418bf37f8 972 mrbayes-mpi-dbgsym_3.2.7a-7_arm64.deb 15783402f087eb99cf574ad895c17cb418ba567fbc9c3d2d37ae0aa9cbea5c2e 536484 mrbayes-mpi_3.2.7a-7_arm64.deb 5775e7b32a191f67d394be1aa7dd71b4c884b515da95cd2e6e8d7646be5ffba5 599352 mrbayes_3.2.7a-7_arm64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Mon, 15 Jan 2024 20:14:34 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: adduser (= 3.137), autoconf (= 2.71-3), autoconf-archive (= 20220903-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-14), autotools-dev (= 20220109.1), base-files (= 13), base-passwd (= 3.6.3), bash (= 5.2.21-2), binutils (= 2.41.50.20231227-1), binutils-common (= 2.41.50.20231227-1), binutils-x86-64-linux-gnu (= 2.41.50.20231227-1), bsdextrautils (= 2.39.3-6), bsdutils (= 1:2.39.3-6), build-essential (= 12.10), bzip2 (= 1.0.8-5+b2), coreutils (= 9.4-3+b1), cpp (= 4:13.2.0-2), cpp-11 (= 11.4.0-7), cpp-13 (= 13.2.0-9), dash (= 0.5.12-6), debconf (= 1.5.83), debhelper (= 13.11.9), debianutils (= 5.16), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.10-1), dpkg (= 1.22.2), dpkg-dev (= 1.22.2), dwz (= 0.15-1), file (= 1:5.45-2+b1), findutils (= 4.9.0-5), flang-17 (= 1:17.0.6-5), g++ (= 4:13.2.0-2), g++-13 (= 13.2.0-9), gcc (= 4:13.2.0-2), gcc-11 (= 11.4.0-7), gcc-11-base (= 11.4.0-7), gcc-13 (= 13.2.0-9), gcc-13-base (= 13.2.0-9), gettext (= 0.21-14), gettext-base (= 0.21-14), grep (= 3.11-4), groff-base (= 1.23.0-3), gzip (= 1.12-1), hostname (= 3.23+nmu2), ibverbs-providers (= 48.0-1), init-system-helpers (= 1.66), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.1-4), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.4.0-7), libasan8 (= 13.2.0-9), libatomic1 (= 13.2.0-9), libattr1 (= 1:2.5.1-5), libaudit-common (= 1:3.1.2-1), libaudit1 (= 1:3.1.2-1), libbinutils (= 2.41.50.20231227-1), libblkid1 (= 2.39.3-6), libbsd0 (= 0.11.8-1), libbz2-1.0 (= 1.0.8-5+b2), libc-bin (= 2.37-13), libc-dev-bin (= 2.37-13), libc6 (= 2.37-13), libc6-dev (= 2.37-13), libcap-ng0 (= 0.8.4-1), libcap2 (= 1:2.66-4+b2), libcbor0.10 (= 0.10.2-1.1), libcc1-0 (= 13.2.0-9), libclang-common-17-dev (= 1:17.0.6-5), libclang-cpp17 (= 1:17.0.6-5), libclc-17 (= 1:17.0.6-5), libclc-17-dev (= 1:17.0.6-5), libcom-err2 (= 1.47.0-2+b1), libcrypt-dev (= 1:4.4.36-4), libcrypt1 (= 1:4.4.36-4), libctf-nobfd0 (= 2.41.50.20231227-1), libctf0 (= 2.41.50.20231227-1), libdb5.3 (= 5.3.28+dfsg2-4+b1), libdebconfclient0 (= 0.271), libdebhelper-perl (= 13.11.9), libdpkg-perl (= 1.22.2), libdrm-amdgpu1 (= 2.4.117-1), libdrm-common (= 2.4.117-1), libdrm-nouveau2 (= 2.4.117-1), libdrm-radeon1 (= 2.4.117-1), libdrm2 (= 2.4.117-1), libedit2 (= 3.1-20230828-1), libelf1 (= 0.190-1+b1), libevent-2.1-7 (= 2.1.12-stable-8), libevent-core-2.1-7 (= 2.1.12-stable-8), libevent-dev (= 2.1.12-stable-8), libevent-extra-2.1-7 (= 2.1.12-stable-8), libevent-openssl-2.1-7 (= 2.1.12-stable-8), libevent-pthreads-2.1-7 (= 2.1.12-stable-8), libexpat1 (= 2.5.0-2+b2), libfabric1 (= 1.17.0-3), libffi8 (= 3.4.4-2), libfido2-1 (= 1.14.0-1), libfile-find-rule-perl (= 0.34-3), libfile-stripnondeterminism-perl (= 1.13.1-1), libflang-17-dev (= 1:17.0.6-5), libgcc-11-dev (= 11.4.0-7), libgcc-13-dev (= 13.2.0-9), libgcc-s1 (= 13.2.0-9), libgcrypt20 (= 1.10.3-2), libgdbm-compat4 (= 1.23-5), libgdbm6 (= 1.23-5), libgmp10 (= 2:6.3.0+dfsg-2), libgomp1 (= 13.2.0-9), libgpg-error0 (= 1.47-3), libgprofng0 (= 2.41.50.20231227-1), libgssapi-krb5-2 (= 1.20.1-5), libhmsbeagle-dev (= 3.1.2+dfsg-13), libhmsbeagle1v5 (= 3.1.2+dfsg-13), libhwasan0 (= 13.2.0-9), libhwloc-dev (= 2.10.0-1), libhwloc-plugins (= 2.10.0-1), libhwloc15 (= 2.10.0-1), libibverbs-dev (= 48.0-1), libibverbs1 (= 48.0-1), libicu72 (= 72.1-4), libisl23 (= 0.26-3+b2), libitm1 (= 13.2.0-9), libjansson4 (= 2.14-2+b2), libjs-jquery (= 3.6.1+dfsg+~3.5.14-1), libjs-jquery-ui (= 1.13.2+dfsg-1), libk5crypto3 (= 1.20.1-5), libkeyutils1 (= 1.6.3-2+b2), libkrb5-3 (= 1.20.1-5), libkrb5support0 (= 1.20.1-5), libllvm17 (= 1:17.0.6-5), libllvmspirvlib17 (= 17.0.0-3), liblsan0 (= 13.2.0-9), libltdl-dev (= 2.4.7-7), libltdl7 (= 2.4.7-7), liblz4-1 (= 1.9.4-1+b2), liblzma5 (= 5.4.5-0.3), libmagic-mgc (= 1:5.45-2+b1), libmagic1 (= 1:5.45-2+b1), libmd0 (= 1.1.0-2), libmount1 (= 2.39.3-6), libmpc3 (= 1.3.1-1+b2), libmpfr6 (= 4.2.1-1), libmunge2 (= 0.5.15-3), libncurses-dev (= 6.4+20231209-1), libncurses6 (= 6.4+20231209-1), libncursesw6 (= 6.4+20231209-1), libnl-3-200 (= 3.7.0-0.2+b1), libnl-3-dev (= 3.7.0-0.2+b1), libnl-route-3-200 (= 3.7.0-0.2+b1), libnl-route-3-dev (= 3.7.0-0.2+b1), libnsl-dev (= 1.3.0-3), libnsl2 (= 1.3.0-3), libnuma-dev (= 2.0.16-1), libnuma1 (= 2.0.16-1), libnumber-compare-perl (= 0.03-3), libopenmpi-dev (= 4.1.6-5), libopenmpi3 (= 4.1.6-5), libpam-modules (= 1.5.2-9.1+b1), libpam-modules-bin (= 1.5.2-9.1+b1), libpam-runtime (= 1.5.2-9.1), libpam0g (= 1.5.2-9.1+b1), libpciaccess0 (= 0.17-3), libpcre2-8-0 (= 10.42-4), libperl5.38 (= 5.38.2-3), libpipeline1 (= 1.5.7-1+b2), libpkgconf3 (= 1.8.1-1+b2), libpmix-dev (= 5.0.1-4), libpmix2 (= 5.0.1-4), libpsm-infinipath1 (= 3.3+20.604758e7-6.3), libpsm2-2 (= 11.2.185-2), libquadmath0 (= 13.2.0-9), librdmacm1 (= 48.0-1), libreadline-dev (= 8.2-3), libreadline8 (= 8.2-3), libseccomp2 (= 2.5.5-1), libselinux1 (= 3.5-1+b2), libsemanage-common (= 3.5-1), libsemanage2 (= 3.5-1+b2), libsepol2 (= 3.5-2), libsframe1 (= 2.41.50.20231227-1), libsmartcols1 (= 2.39.3-6), libssl3 (= 3.1.4-2), libstdc++-13-dev (= 13.2.0-9), libstdc++6 (= 13.2.0-9), libsub-override-perl (= 0.10-1), libsystemd0 (= 255.2-4), libtext-glob-perl (= 0.11-3), libtinfo6 (= 6.4+20231209-1), libtirpc-common (= 1.3.4+ds-1), libtirpc-dev (= 1.3.4+ds-1), libtirpc3 (= 1.3.4+ds-1), libtool (= 2.4.7-7), libtsan0 (= 11.4.0-7), libtsan2 (= 13.2.0-9), libubsan1 (= 13.2.0-9), libuchardet0 (= 0.0.8-1), libucx0 (= 1.15.0-1), libudev1 (= 255.2-4), libunistring5 (= 1.1-2), libuuid1 (= 2.39.3-6), libx11-6 (= 2:1.8.7-1), libx11-data (= 2:1.8.7-1), libxau6 (= 1:1.0.9-1), libxcb1 (= 1.15-1), libxdmcp6 (= 1:1.1.2-3), libxext6 (= 2:1.3.4-1+b1), libxml2 (= 2.9.14+dfsg-1.3+b2), libxnvctrl0 (= 525.125.06-1), libz3-4 (= 4.8.12-3.1+b2), libzstd1 (= 1.5.5+dfsg2-2), linux-libc-dev (= 6.6.11-1), login (= 1:4.13+dfsg1-3+b1), m4 (= 1.4.19-4), make (= 4.3-4.1), man-db (= 2.12.0-3), mawk (= 1.3.4.20231126-1), mesa-opencl-icd (= 23.3.3-1), mpi-default-dev (= 1.15), ncurses-base (= 6.4+20231209-1), ncurses-bin (= 6.4+20231209-1), ocl-icd-libopencl1 (= 2.3.2-1), openmpi-bin (= 4.1.6-5), openmpi-common (= 4.1.6-5), openssh-client (= 1:9.6p1-2), passwd (= 1:4.13+dfsg1-3+b1), patch (= 2.7.6-7), perl (= 5.38.2-3), perl-base (= 5.38.2-3), perl-modules-5.38 (= 5.38.2-3), pkg-config (= 1.8.1-1+b2), pkgconf (= 1.8.1-1+b2), pkgconf-bin (= 1.8.1-1+b2), po-debconf (= 1.0.21+nmu1), readline-common (= 8.2-3), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.20), sysvinit-utils (= 3.08-5), tar (= 1.35+dfsg-3), usrmerge (= 38), util-linux (= 2.39.3-6), xz-utils (= 5.4.5-0.3), zlib1g (= 1:1.3.dfsg-3+b1), zlib1g-dev (= 1:1.3.dfsg-3+b1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1705239317" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ mrbayes-dbgsym_3.2.7a-7_arm64.deb --------------------------------- new Debian package, version 2.0. size 1058272 bytes: control archive=536 bytes. 373 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: mrbayes-dbgsym Source: mrbayes Version: 3.2.7a-7 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 1093 Depends: mrbayes (= 3.2.7a-7) Section: debug Priority: optional Description: debug symbols for mrbayes Build-Ids: 3f1d7d76a706fa3517296cf6ef5d736f7bf0af4d drwxr-xr-x root/root 0 2024-01-14 13:35 ./ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/lib/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/lib/debug/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/lib/debug/.build-id/3f/ -rw-r--r-- root/root 1108096 2024-01-14 13:35 ./usr/lib/debug/.build-id/3f/1d7d76a706fa3517296cf6ef5d736f7bf0af4d.debug drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/share/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/share/doc/ lrwxrwxrwx root/root 0 2024-01-14 13:35 ./usr/share/doc/mrbayes-dbgsym -> mrbayes mrbayes-mpi-dbgsym_3.2.7a-7_arm64.deb ------------------------------------- new Debian package, version 2.0. size 972 bytes: control archive=484 bytes. 383 bytes, 12 lines control 0 bytes, 0 lines md5sums Package: mrbayes-mpi-dbgsym Source: mrbayes Version: 3.2.7a-7 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 10 Depends: mrbayes-mpi (= 3.2.7a-7) Section: debug Priority: optional Description: debug symbols for mrbayes-mpi Build-Ids: 3f1d7d76a706fa3517296cf6ef5d736f7bf0af4d drwxr-xr-x root/root 0 2024-01-14 13:35 ./ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/lib/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/lib/debug/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/lib/debug/.build-id/3f/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/share/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/share/doc/ lrwxrwxrwx root/root 0 2024-01-14 13:35 ./usr/share/doc/mrbayes-mpi-dbgsym -> mrbayes-mpi mrbayes-mpi_3.2.7a-7_arm64.deb ------------------------------ new Debian package, version 2.0. size 536484 bytes: control archive=1040 bytes. 1003 bytes, 21 lines control 399 bytes, 6 lines md5sums Package: mrbayes-mpi Source: mrbayes Version: 3.2.7a-7 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 1567 Depends: libc6 (>= 2.34), libhmsbeagle1v5 (>= 3.1.2+dfsg), libreadline8 (>= 6.0), mpi-default-bin, ssh Suggests: mpi-default, mrbayes-doc Section: science Priority: optional Homepage: http://mrbayes.csit.fsu.edu/ Description: Bayesian Inference of Phylogeny - mpi version Bayesian inference of phylogeny is based upon a quantity called the posterior probability distribution of trees, which is the probability of a tree conditioned on the observations. The conditioning is accomplished using Bayes's theorem. The posterior probability distribution of trees is impossible to calculate analytically; instead, MrBayes uses a simulation technique called Markov chain Monte Carlo (or MCMC) to approximate the posterior probabilities of trees. . This package offers a binary compiled for parallel computation with MPI. drwxr-xr-x root/root 0 2024-01-14 13:35 ./ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/bin/ -rwxr-xr-x root/root 162 2024-01-14 13:35 ./usr/bin/mb-mpi drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/lib/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/lib/mrbayes-mpi/ -rwxr-xr-x root/root 1585336 2024-01-14 13:35 ./usr/lib/mrbayes-mpi/mb-mpi drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/share/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/share/doc/mrbayes-mpi/ -rw-r--r-- root/root 348 2024-01-14 13:35 ./usr/share/doc/mrbayes-mpi/README.Debian -rw-r--r-- root/root 1061 2024-01-14 13:35 ./usr/share/doc/mrbayes-mpi/changelog.Debian.gz -rw-r--r-- root/root 1567 2024-01-14 13:35 ./usr/share/doc/mrbayes-mpi/copyright drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/share/man/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/share/man/man1/ -rw-r--r-- root/root 226 2024-01-14 13:35 ./usr/share/man/man1/mb-mpi.1.gz mrbayes_3.2.7a-7_arm64.deb -------------------------- new Debian package, version 2.0. size 599352 bytes: control archive=1240 bytes. 857 bytes, 18 lines control 1084 bytes, 15 lines md5sums Package: mrbayes Version: 3.2.7a-7 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 2631 Depends: libc6 (>= 2.34), libhmsbeagle1v5 (>= 3.1.2+dfsg), libreadline8 (>= 6.0) Suggests: mrbayes-doc Section: science Priority: optional Homepage: http://mrbayes.csit.fsu.edu/ Description: Bayesian Inference of Phylogeny Bayesian inference of phylogeny is based upon a quantity called the posterior probability distribution of trees, which is the probability of a tree conditioned on the observations. The conditioning is accomplished using Bayes's theorem. The posterior probability distribution of trees is impossible to calculate analytically; instead, MrBayes uses a simulation technique called Markov chain Monte Carlo (or MCMC) to approximate the posterior probabilities of trees. drwxr-xr-x root/root 0 2024-01-14 13:35 ./ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/bin/ -rwxr-xr-x root/root 1585336 2024-01-14 13:35 ./usr/bin/mb drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/share/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/share/doc/mrbayes/ -rw-r--r-- root/root 311 2024-01-14 13:35 ./usr/share/doc/mrbayes/README.Debian -rw-r--r-- root/root 262 2024-01-14 13:35 ./usr/share/doc/mrbayes/README.test -rw-r--r-- root/root 1060 2024-01-14 13:35 ./usr/share/doc/mrbayes/changelog.Debian.gz -rw-r--r-- root/root 1567 2024-01-14 13:35 ./usr/share/doc/mrbayes/copyright drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/share/doc/mrbayes/examples/ -rw-r--r-- root/root 11789 2019-03-06 16:43 ./usr/share/doc/mrbayes/examples/avian_ovomucoids.nex -rw-r--r-- root/root 1689 2019-03-06 16:43 ./usr/share/doc/mrbayes/examples/codon.nex -rw-r--r-- root/root 116675 2019-03-06 16:43 ./usr/share/doc/mrbayes/examples/cynmix.nex -rw-r--r-- root/root 68673 2019-03-06 16:43 ./usr/share/doc/mrbayes/examples/finch.nex -rw-r--r-- root/root 666195 2019-03-06 16:43 ./usr/share/doc/mrbayes/examples/hymfossil.nex -rw-r--r-- root/root 11326 2019-03-06 16:43 ./usr/share/doc/mrbayes/examples/primates.nex -rw-r--r-- root/root 7693 2019-03-06 16:43 ./usr/share/doc/mrbayes/examples/replicase.nex -rw-r--r-- root/root 201334 2019-03-06 16:43 ./usr/share/doc/mrbayes/examples/sceloporus.nex -rw-r--r-- root/root 441 2024-01-14 13:35 ./usr/share/doc/mrbayes/run-unit-test drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/share/man/ drwxr-xr-x root/root 0 2024-01-14 13:35 ./usr/share/man/man1/ -rw-r--r-- root/root 206 2024-01-14 13:35 ./usr/share/man/man1/mb.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1378 B] Get:5 copy:/<>/apt_archive ./ Packages [1457 B] Fetched 3450 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following packages were automatically installed and are no longer required: cpp-9:arm64 gcc-9-base:arm64 libcc1-0:arm64 libgmp10:arm64 libisl23:arm64 libmpc3:arm64 libmpfr6:arm64 Use 'apt autoremove' to remove them. The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl libio-compress-brotli-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip sbuild-build-depends-lintian-dummy:arm64 t1utils unzip 0 upgraded, 125 newly installed, 0 to remove and 0 not upgraded. Need to get 13.7 MB of archives. After this operation, 51.7 MB of additional disk space will be used. 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0.63-1+b2 [43.9 kB] Get:23 http://localhost:3142/debian sid/main amd64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get:24 http://localhost:3142/debian sid/main amd64 libberkeleydb-perl amd64 0.64-2+b2 [121 kB] Get:25 http://localhost:3142/debian sid/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:26 http://localhost:3142/debian sid/main amd64 libhtml-tagset-perl all 3.20-6 [11.7 kB] Get:27 http://localhost:3142/debian sid/main amd64 liburi-perl all 5.21-1 [95.6 kB] Get:28 http://localhost:3142/debian sid/main amd64 libhtml-parser-perl amd64 3.81-1+b1 [99.0 kB] Get:29 http://localhost:3142/debian sid/main amd64 libcgi-pm-perl all 4.60-1 [219 kB] Get:30 http://localhost:3142/debian sid/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:31 http://localhost:3142/debian sid/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:32 http://localhost:3142/debian sid/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b2 [36.3 kB] Get:33 http://localhost:3142/debian sid/main amd64 libclone-perl amd64 0.46-1+b1 [13.8 kB] Get:34 http://localhost:3142/debian sid/main amd64 libconfig-tiny-perl all 2.30-1 [18.9 kB] Get:35 http://localhost:3142/debian sid/main amd64 libparams-util-perl amd64 1.102-2+b2 [24.4 kB] Get:36 http://localhost:3142/debian sid/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get:37 http://localhost:3142/debian sid/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:38 http://localhost:3142/debian sid/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:39 http://localhost:3142/debian sid/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:40 http://localhost:3142/debian sid/main amd64 libcpanel-json-xs-perl amd64 4.37-1+b1 [128 kB] Get:41 http://localhost:3142/debian sid/main amd64 libdevel-stacktrace-perl all 2.0400-2 [26.8 kB] Get:42 http://localhost:3142/debian sid/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:43 http://localhost:3142/debian sid/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:44 http://localhost:3142/debian sid/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:45 http://localhost:3142/debian sid/main amd64 libdata-dpath-perl all 0.59-1 [43.6 kB] Get:46 http://localhost:3142/debian sid/main amd64 libdata-messagepack-perl amd64 1.02-1+b2 [32.6 kB] Get:47 http://localhost:3142/debian sid/main amd64 libnet-domain-tld-perl all 1.75-3 [31.9 kB] Get:48 http://localhost:3142/debian sid/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:49 http://localhost:3142/debian sid/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:50 http://localhost:3142/debian sid/main amd64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:51 http://localhost:3142/debian sid/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2+b2 [98.1 kB] Get:52 http://localhost:3142/debian sid/main amd64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:53 http://localhost:3142/debian sid/main amd64 libdata-validate-uri-perl all 0.07-2 [11.2 kB] Get:54 http://localhost:3142/debian sid/main amd64 libdevel-size-perl amd64 0.83-2+b2 [24.3 kB] Get:55 http://localhost:3142/debian sid/main amd64 libemail-address-xs-perl amd64 1.05-1+b2 [29.3 kB] Get:56 http://localhost:3142/debian sid/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:57 http://localhost:3142/debian sid/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:58 http://localhost:3142/debian sid/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:59 http://localhost:3142/debian sid/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:60 http://localhost:3142/debian sid/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:61 http://localhost:3142/debian sid/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:62 http://localhost:3142/debian sid/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:63 http://localhost:3142/debian sid/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:64 http://localhost:3142/debian sid/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:65 http://localhost:3142/debian sid/main amd64 libhttp-message-perl all 6.45-1 [82.0 kB] Get:66 http://localhost:3142/debian sid/main amd64 libhtml-form-perl all 6.11-1 [33.1 kB] Get:67 http://localhost:3142/debian sid/main amd64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:68 http://localhost:3142/debian sid/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:69 http://localhost:3142/debian sid/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:70 http://localhost:3142/debian sid/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:71 http://localhost:3142/debian sid/main amd64 perl-openssl-defaults amd64 7+b1 [7924 B] Get:72 http://localhost:3142/debian sid/main amd64 libnet-ssleay-perl amd64 1.92-2+b2 [313 kB] Get:73 http://localhost:3142/debian sid/main amd64 libio-socket-ssl-perl all 2.084-1 [216 kB] Get:74 http://localhost:3142/debian sid/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:75 http://localhost:3142/debian sid/main amd64 liblwp-protocol-https-perl all 6.11-1 [10.5 kB] Get:76 http://localhost:3142/debian sid/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:77 http://localhost:3142/debian sid/main amd64 libwww-perl all 6.72-1 [187 kB] Get:78 http://localhost:3142/debian sid/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:79 http://localhost:3142/debian sid/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:80 http://localhost:3142/debian sid/main amd64 libio-interactive-perl all 1.025-1 [11.4 kB] Get:81 http://localhost:3142/debian sid/main amd64 libipc-run3-perl all 0.048-3 [33.2 kB] Get:82 http://localhost:3142/debian sid/main amd64 libjson-maybexs-perl all 1.004005-1 [12.9 kB] Get:83 http://localhost:3142/debian sid/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:84 http://localhost:3142/debian sid/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:85 http://localhost:3142/debian sid/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:86 http://localhost:3142/debian sid/main amd64 liblz1 amd64 1.13-6 [37.8 kB] Get:87 http://localhost:3142/debian sid/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:88 http://localhost:3142/debian sid/main amd64 libmarkdown2 amd64 2.2.7-2+b1 [35.6 kB] Get:89 http://localhost:3142/debian sid/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:90 http://localhost:3142/debian sid/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:91 http://localhost:3142/debian sid/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:92 http://localhost:3142/debian sid/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:93 http://localhost:3142/debian sid/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:94 http://localhost:3142/debian sid/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:95 http://localhost:3142/debian sid/main amd64 libmouse-perl amd64 2.5.10-1+b4 [143 kB] Get:96 http://localhost:3142/debian sid/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:97 http://localhost:3142/debian sid/main amd64 libsub-identify-perl amd64 0.14-3+b1 [11.2 kB] Get:98 http://localhost:3142/debian sid/main amd64 libsub-name-perl amd64 0.27-1+b1 [12.5 kB] Get:99 http://localhost:3142/debian sid/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:100 http://localhost:3142/debian sid/main amd64 libpath-tiny-perl all 0.144-1 [56.4 kB] Get:101 http://localhost:3142/debian sid/main amd64 libperlio-gzip-perl amd64 0.20-1+b2 [17.5 kB] Get:102 http://localhost:3142/debian sid/main amd64 libperlio-utf8-strict-perl amd64 0.010-1+b1 [11.4 kB] Get:103 http://localhost:3142/debian sid/main amd64 libproc-processtable-perl amd64 0.636-1+b1 [42.2 kB] Get:104 http://localhost:3142/debian sid/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:105 http://localhost:3142/debian sid/main amd64 libsereal-decoder-perl amd64 5.004+ds-1+b1 [99.2 kB] Get:106 http://localhost:3142/debian sid/main amd64 libsereal-encoder-perl amd64 5.004+ds-1+b1 [102 kB] Get:107 http://localhost:3142/debian sid/main amd64 libsort-versions-perl all 1.62-3 [8928 B] Get:108 http://localhost:3142/debian sid/main amd64 libxs-parse-keyword-perl amd64 0.39-1+b1 [57.5 kB] Get:109 http://localhost:3142/debian sid/main amd64 libsyntax-keyword-try-perl amd64 0.29-1+b1 [27.1 kB] Get:110 http://localhost:3142/debian sid/main amd64 libterm-readkey-perl amd64 2.38-2+b2 [24.7 kB] Get:111 http://localhost:3142/debian sid/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b2 [8704 B] Get:112 http://localhost:3142/debian sid/main amd64 libtext-markdown-discount-perl amd64 0.16-1+b1 [13.0 kB] Get:113 http://localhost:3142/debian sid/main amd64 libtext-xslate-perl amd64 3.5.9-1+b3 [174 kB] Get:114 http://localhost:3142/debian sid/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:115 http://localhost:3142/debian sid/main amd64 libtime-moment-perl amd64 0.44-2+b2 [72.7 kB] Get:116 http://localhost:3142/debian sid/main amd64 libunicode-utf8-perl amd64 0.62-2+b1 [20.3 kB] Get:117 http://localhost:3142/debian sid/main amd64 libwww-mechanize-perl all 2.17-1 [116 kB] Get:118 http://localhost:3142/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB] Get:119 http://localhost:3142/debian sid/main amd64 libyaml-libyaml-perl amd64 0.86+ds-1+b1 [34.2 kB] Get:120 http://localhost:3142/debian sid/main amd64 plzip amd64 1.10-6 [63.1 kB] Get:121 http://localhost:3142/debian sid/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:122 http://localhost:3142/debian sid/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:123 http://localhost:3142/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:124 http://localhost:3142/debian sid/main amd64 unzip amd64 6.0-28 [166 kB] Get:125 http://localhost:3142/debian sid/main amd64 lintian all 2.116.3 [1130 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 13.7 MB in 0s (105 MB/s) Selecting previously unselected package netbase. (Reading database ... 29294 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package openssl. Preparing to unpack .../001-openssl_3.1.4-2_amd64.deb ... Unpacking openssl (3.1.4-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../002-ca-certificates_20230311_all.deb ... Unpacking ca-certificates (20230311) ... Selecting previously unselected package diffstat. Preparing to unpack .../003-diffstat_1.65-1_amd64.deb ... Unpacking diffstat (1.65-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../004-libassuan0_2.5.6-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.6-1) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../005-libreadline8_8.2-3_amd64.deb ... Unpacking libreadline8:amd64 (8.2-3) ... Selecting previously unselected package gpgconf. 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Setting up plzip (1.10-6) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-2+b1) ... Setting up libmouse-perl (2.5.10-1+b4) ... Setting up libdata-messagepack-perl (1.02-1+b2) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:amd64 (0.46-1+b1) ... Setting up libyaml-0-2:amd64 (0.2.5-1) ... Setting up libsub-identify-perl (0.14-3+b1) ... Setting up libcpanel-json-xs-perl:amd64 (4.37-1+b1) ... Setting up libhtml-tagset-perl (3.20-6) ... Setting up libdevel-size-perl (0.83-2+b2) ... Setting up unzip (6.0-28) ... Setting up libreadline8:amd64 (8.2-3) ... Setting up libsqlite3-0:amd64 (3.44.2-1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.86+ds-1+b1) ... Setting up libio-interactive-perl (1.025-1) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up perl-openssl-defaults:amd64 (7+b1) ... Setting up libmldbm-perl (2.05-4) ... Setting up liblzo2-2:amd64 (2.10-2) ... Setting up libtime-moment-perl (0.44-2+b2) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libassuan0:amd64 (2.5.6-1) ... Setting up libconfig-tiny-perl (2.30-1) ... Setting up libsereal-encoder-perl (5.004+ds-1+b1) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up libnet-netmask-perl (2.0002-2) ... Setting up libsub-install-perl (0.929-1) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004005-1) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2+b2) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libxs-parse-keyword-perl (0.39-1+b1) ... Setting up libipc-system-simple-perl (1.30-2) ... Setting up libnet-domain-tld-perl (1.75-3) ... Setting up libperlio-utf8-strict-perl (0.010-1+b1) ... Setting up t1utils (1.41-4) ... Setting up diffstat (1.65-1) ... Setting up libvariable-magic-perl (0.63-1+b2) ... Setting up libio-html-perl (1.004-3) ... Setting up libb-hooks-op-check-perl:amd64 (0.22-2+b2) ... Setting up libparams-util-perl (1.102-2+b2) ... Setting up libtime-duration-perl (1.21-2) ... Setting up libtext-xslate-perl:amd64 (3.5.9-1+b3) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up libcapture-tiny-perl (0.48-2) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libsub-name-perl:amd64 (0.27-1+b1) ... Setting up libsyntax-keyword-try-perl (0.29-1+b1) ... Setting up libdata-validate-domain-perl (0.10-1.1) ... Setting up libproc-processtable-perl:amd64 (0.636-1+b1) ... Setting up libpath-tiny-perl (0.144-1) ... Setting up lzop (1.04-2) ... Setting up gpgconf (2.2.40-1.1+b1) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libipc-run3-perl (0.048-3) ... Setting up libregexp-wildcards-perl (1.05-3) ... Setting up libaliased-perl (0.34-3) ... Setting up netbase (6.4) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006008-1) ... Setting up libdevel-stacktrace-perl (2.0400-2) ... Setting up libclass-xsaccessor-perl (1.19-4+b2) ... Setting up libsort-versions-perl (1.62-3) ... Setting up libterm-readkey-perl (2.38-2+b2) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.1.4-2) ... Setting up libtext-levenshteinxs-perl (0.03-5+b2) ... Setting up libperlio-gzip-perl (0.20-1+b2) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.004+ds-1+b1) ... Setting up libmarkdown2:amd64 (2.2.7-2+b1) ... Setting up liburi-perl (5.21-1) ... Setting up iso-codes (4.16.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up gpg (2.2.40-1.1+b1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b2) ... Setting up libnet-ssleay-perl:amd64 (1.92-2+b2) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libtext-markdown-discount-perl (0.16-1+b1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:amd64 (0.008-2+b1) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:amd64 (3.81-1+b1) ... Setting up libio-socket-ssl-perl (2.084-1) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (6.45-1) ... Setting up libhtml-form-perl (6.11-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b2) ... Setting up libcgi-pm-perl (4.60-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.59-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.72-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.17-1) ... Setting up liblwp-protocol-https-perl (6.11-1) ... Setting up lintian (2.116.3) ... Setting up sbuild-build-depends-lintian-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.37-13) ... Processing triggers for man-db (2.12.0-3) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 56208 Build-Time: 138 Distribution: unstable Foreign Architectures: arm64 Host Architecture: arm64 Install-Time: 27 Job: mrbayes_3.2.7a-7 Lintian: pass Machine Architecture: amd64 Package: mrbayes Package-Time: 176 Source-Version: 3.2.7a-7 Space: 56208 Status: successful Version: 3.2.7a-7 -------------------------------------------------------------------------------- Finished at 2024-01-15T20:14:34Z Build needed 00:02:56, 56208k disk space