sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on gcc131.bak.milne.osuosl.org
+==============================================================================+
| mummer 3.23+dfsg-4 (armel) Thu, 16 May 2019 08:57:13 +0000 |
+==============================================================================+
Package: mummer
Version: 3.23+dfsg-4
Source Version: 3.23+dfsg-4
Distribution: unstable
Machine Architecture: amd64
Host Architecture: armel
Build Architecture: amd64
Build Profiles: cross nocheck
Build Type: any
I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-2f793382-5c28-4391-8971-ba4c7a122c4e' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Hit:1 http://debian.oregonstate.edu/debian unstable InRelease
Get:2 http://debian.oregonstate.edu/debian unstable/main armel Packages [8005 kB]
Fetched 8005 kB in 2s (3767 kB/s)
Reading package lists...
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Building dependency tree...
Reading state information...
Calculating upgrade...
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'mummer' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/mummer.git
Please use:
git clone https://salsa.debian.org/med-team/mummer.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 1528 kB of source archives.
Get:1 http://debian.oregonstate.edu/debian unstable/main mummer 3.23+dfsg-4 (dsc) [2167 B]
Get:2 http://debian.oregonstate.edu/debian unstable/main mummer 3.23+dfsg-4 (tar) [1113 kB]
Get:3 http://debian.oregonstate.edu/debian unstable/main mummer 3.23+dfsg-4 (diff) [413 kB]
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Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/mummer-HRqyNm/mummer-3.23+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/mummer-HRqyNm' with '<<BUILDDIR>>'
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| Install crossbuild-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64
Filtered Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-wpVEgp/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
Ign:1 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ Release [957 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ Sources [359 B]
Get:5 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ Packages [451 B]
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Reading package lists...
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Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
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Building dependency tree...
Reading state information...
The following additional packages will be installed:
binutils-arm-linux-gnueabi cpp-8-arm-linux-gnueabi cpp-arm-linux-gnueabi
cross-config crossbuild-essential-armel dpkg-cross file
g++-8-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-8-arm-linux-gnueabi
gcc-8-arm-linux-gnueabi-base gcc-8-cross-base gcc-arm-linux-gnueabi
libasan5-armel-cross libatomic1-armel-cross libc6-armel-cross
libc6-dev-armel-cross libconfig-auto-perl libconfig-inifiles-perl
libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl
libgcc-8-dev-armel-cross libgcc1-armel-cross libgomp1-armel-cross libicu63
libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1
libstdc++-8-dev-armel-cross libstdc++6-armel-cross libubsan1-armel-cross
libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl
libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl
linux-libc-dev-armel-cross sensible-utils ucf
Suggested packages:
binutils-doc gcc-8-locales cpp-doc binutils-multiarch gcc-8-doc
libstdc++6-8-dbg-armel-cross libgcc1-dbg-armel-cross
libgomp1-dbg-armel-cross libitm1-dbg-armel-cross libatomic1-dbg-armel-cross
libasan5-dbg-armel-cross liblsan0-dbg-armel-cross libtsan0-dbg-armel-cross
libubsan1-dbg-armel-cross libmpx2-dbg-armel-cross
libquadmath0-dbg-armel-cross manpages-dev autoconf automake libtool flex
bison gdb-arm-linux-gnueabi gcc-doc libyaml-shell-perl
Recommended packages:
libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl
The following NEW packages will be installed:
binutils-arm-linux-gnueabi cpp-8-arm-linux-gnueabi cpp-arm-linux-gnueabi
cross-config crossbuild-essential-armel dpkg-cross file
g++-8-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-8-arm-linux-gnueabi
gcc-8-arm-linux-gnueabi-base gcc-8-cross-base gcc-arm-linux-gnueabi
libasan5-armel-cross libatomic1-armel-cross libc6-armel-cross
libc6-dev-armel-cross libconfig-auto-perl libconfig-inifiles-perl
libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl
libgcc-8-dev-armel-cross libgcc1-armel-cross libgomp1-armel-cross libicu63
libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1
libstdc++-8-dev-armel-cross libstdc++6-armel-cross libubsan1-armel-cross
libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl
libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl
linux-libc-dev-armel-cross sbuild-build-depends-core-dummy:armel
sensible-utils ucf
0 upgraded, 44 newly installed, 0 to remove and 0 not upgraded.
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Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB]
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Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-cross-base all 8.3.0-7cross1 [186 kB]
Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armel-cross all 2.28-10cross2 [1190 kB]
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Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armel-cross all 8.3.0-7cross1 [65.6 kB]
Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armel-cross all 8.3.0-7cross1 [8812 B]
Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armel-cross all 8.3.0-7cross1 [288 kB]
Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-armel-cross all 8.3.0-7cross1 [311 kB]
Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armel-cross all 8.3.0-7cross1 [102 kB]
Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-8-dev-armel-cross all 8.3.0-7cross1 [601 kB]
Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-arm-linux-gnueabi amd64 8.3.0-7cross1 [6970 kB]
Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabi amd64 4:8.3.0-1 [1460 B]
Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armel-cross all 4.19.28-2cross2 [1228 kB]
Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armel-cross all 2.28-10cross2 [2184 kB]
Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-8-dev-armel-cross all 8.3.0-7cross1 [1543 kB]
Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 g++-8-arm-linux-gnueabi amd64 8.3.0-7cross1 [7123 kB]
Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabi amd64 4:8.3.0-1 [1176 B]
Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB]
Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB]
Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.1-6 [8292 kB]
Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB]
Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB]
Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB]
Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.00+dfsg-1 [58.6 kB]
Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1 [344 kB]
Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB]
Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.27-1 [66.8 kB]
Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB]
Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB]
Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB]
Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-2 [38.5 kB]
Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-2 [49.3 kB]
Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armel all 12.6 [6568 B]
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update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
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Setting up libxml-libxml-perl (2.0134+dfsg-1) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up libgcc-8-dev-armel-cross (8.3.0-7cross1) ...
Setting up libxml-simple-perl (2.25-1) ...
Setting up gcc-8-arm-linux-gnueabi (8.3.0-7cross1) ...
Setting up libstdc++-8-dev-armel-cross (8.3.0-7cross1) ...
Setting up libconfig-auto-perl (0.44-1) ...
Setting up gcc-arm-linux-gnueabi (4:8.3.0-1) ...
Setting up libdebian-dpkgcross-perl (2.6.15-2) ...
Setting up g++-8-arm-linux-gnueabi (8.3.0-7cross1) ...
Setting up g++-arm-linux-gnueabi (4:8.3.0-1) ...
Setting up dpkg-cross (2.6.15-2) ...
Setting up crossbuild-essential-armel (12.6) ...
Setting up sbuild-build-depends-core-dummy:armel (0.invalid.0) ...
Processing triggers for libc-bin (2.28-10) ...
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armel included in any all)
Setup apt archive
-----------------
dpkg-deb: building package 'sbuild-build-depends-essential-dummy' in '/<<BUILDDIR>>/resolver-wpVEgp/apt_archive/sbuild-build-depends-essential-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
Ign:1 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ Release [963 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ Sources [481 B]
Get:5 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ Packages [571 B]
Fetched 2015 B in 0s (106 kB/s)
Reading package lists...
Reading package lists...
Install essential build dependencies (apt-based resolver)
---------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
sbuild-build-depends-essential-dummy:armel
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 840 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ sbuild-build-depends-essential-dummy 0.invalid.0 [840 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 840 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-essential-dummy:armel.
(Reading database ... 14987 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-essential-dummy_0.invalid.0_armel.deb ...
Unpacking sbuild-build-depends-essential-dummy:armel (0.invalid.0) ...
Setting up sbuild-build-depends-essential-dummy:armel (0.invalid.0) ...
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), texlive-latex-base, texlive-latex-recommended, texlive-fonts-recommended
Filtered Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), texlive-latex-base, texlive-latex-recommended, texlive-fonts-recommended
dpkg-deb: building package 'sbuild-build-depends-mummer-dummy' in '/<<BUILDDIR>>/resolver-wpVEgp/apt_archive/sbuild-build-depends-mummer-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-mummer-dummy
dpkg-scanpackages: info: Wrote 3 entries to output Packages file.
Ign:1 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ Release [963 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ Sources [664 B]
Get:5 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ Packages [747 B]
Fetched 2374 B in 0s (133 kB/s)
Reading package lists...
Reading package lists...
Install mummer build dependencies (apt-based resolver)
------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism dwz fontconfig-config
fonts-dejavu-core fonts-lmodern gcc-8-base:armel gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libasan5:armel
libatomic1:armel libavahi-client3 libavahi-common-data libavahi-common3
libbrotli1 libbsd0 libc6:armel libc6-dev:armel libcairo2 libcroco3 libcups2
libcupsimage2 libdbus-1-3 libelf1 libexpat1 libfile-stripnondeterminism-perl
libfontconfig1 libfreetype6 libgcc-8-dev:armel libgcc1:armel libglib2.0-0
libgomp1:armel libgraphite2-3 libgs9 libgs9-common libgssapi-krb5-2
libharfbuzz-icu0 libharfbuzz0b libice6 libidn11 libijs-0.35 libjbig0
libjbig2dec0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkpathsea6
libkrb5-3 libkrb5support0 liblcms2-2 libncurses6 libopenjp2-7 libpaper-utils
libpaper1 libpipeline1 libpixman-1-0 libpng16-16 libpotrace0 libptexenc1
libsigsegv2 libsm6 libssl1.1 libstdc++-8-dev:armel libstdc++6:armel
libsynctex2 libteckit0 libtexlua52 libtexlua53 libtexluajit2 libtiff5
libtool libubsan1:armel libuchardet0 libwebp6 libwoff1 libx11-6 libx11-data
libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6
libxmu6 libxpm4 libxrender1 libxt6 libxxhash0 libzzip-0-13
linux-libc-dev:armel lsb-base m4 man-db po-debconf poppler-data t1utils
tex-common texlive-base texlive-binaries texlive-fonts-recommended
texlive-latex-base texlive-latex-recommended x11-common xdg-utils
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff
glibc-doc:armel libc-l10n:armel locales:armel manpages-dev:armel cups-common
krb5-doc krb5-user liblcms2-utils libstdc++-8-doc:armel libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl poppler-utils ghostscript fonts-japanese-mincho
| fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic
fonts-arphic-ukai fonts-arphic-uming fonts-nanum gv | postscript-viewer
perl-tk xpdf-reader | pdf-viewer texlive-fonts-recommended-doc
texlive-latex-base-doc texlive-latex-recommended-doc texlive-pstricks
Recommended packages:
curl | wget | lynx libidn2-0:armel libcupsfilters1 dbus libarchive-cpio-perl
libglib2.0-data shared-mime-info xdg-user-dirs fonts-droid-fallback
krb5-locales libgpm2 libltdl-dev libmail-sendmail-perl lmodern tex-gyre tipa
libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism dwz fontconfig-config
fonts-dejavu-core fonts-lmodern gcc-8-base:armel gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libasan5:armel
libatomic1:armel libavahi-client3 libavahi-common-data libavahi-common3
libbrotli1 libbsd0 libc6:armel libc6-dev:armel libcairo2 libcroco3 libcups2
libcupsimage2 libdbus-1-3 libelf1 libexpat1 libfile-stripnondeterminism-perl
libfontconfig1 libfreetype6 libgcc-8-dev:armel libgcc1:armel libglib2.0-0
libgomp1:armel libgraphite2-3 libgs9 libgs9-common libgssapi-krb5-2
libharfbuzz-icu0 libharfbuzz0b libice6 libidn11 libijs-0.35 libjbig0
libjbig2dec0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkpathsea6
libkrb5-3 libkrb5support0 liblcms2-2 libncurses6 libopenjp2-7 libpaper-utils
libpaper1 libpipeline1 libpixman-1-0 libpng16-16 libpotrace0 libptexenc1
libsigsegv2 libsm6 libssl1.1 libstdc++-8-dev:armel libstdc++6:armel
libsynctex2 libteckit0 libtexlua52 libtexlua53 libtexluajit2 libtiff5
libtool libubsan1:armel libuchardet0 libwebp6 libwoff1 libx11-6 libx11-data
libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6
libxmu6 libxpm4 libxrender1 libxt6 libxxhash0 libzzip-0-13
linux-libc-dev:armel lsb-base m4 man-db po-debconf poppler-data
sbuild-build-depends-mummer-dummy:armel t1utils tex-common texlive-base
texlive-binaries texlive-fonts-recommended texlive-latex-base
texlive-latex-recommended x11-common xdg-utils
0 upgraded, 116 newly installed, 0 to remove and 0 not upgraded.
Need to get 98.8 MB of archives.
After this operation, 337 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ sbuild-build-depends-mummer-dummy 0.invalid.0 [900 B]
Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.9.1-2 [99.5 kB]
Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB]
Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB]
Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB]
Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB]
Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.5-2 [1274 kB]
Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 poppler-data all 0.4.9-2 [1473 kB]
Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 tex-common all 6.11 [53.1 kB]
Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB]
Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB]
Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB]
Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB]
Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB]
Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB]
Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB]
Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-10 [547 kB]
Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB]
Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB]
Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB]
Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB]
Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1 [160 kB]
Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.12-3 [78.0 kB]
Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.58.3-1 [1258 kB]
Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.12-3 [145 kB]
Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20181013-2 [102 kB]
Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB]
Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB]
Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.1.1 [1016 kB]
Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 fonts-dejavu-core all 2.37-1 [1068 kB]
Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 fontconfig-config all 2.13.1-2 [280 kB]
Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 fonts-lmodern all 2.004.5-6 [4539 kB]
Get:34 http://debian.oregonstate.edu/debian unstable/main armel gcc-8-base armel 8.3.0-7 [191 kB]
Get:35 http://debian.oregonstate.edu/debian unstable/main armel libgcc1 armel 1:8.3.0-7 [38.4 kB]
Get:36 http://debian.oregonstate.edu/debian unstable/main armel libc6 armel 2.28-10 [2399 kB]
Get:37 http://debian.oregonstate.edu/debian unstable/main armel libstdc++6 armel 8.3.0-7 [325 kB]
Get:38 http://debian.oregonstate.edu/debian unstable/main armel libasan5 armel 8.3.0-7 [317 kB]
Get:39 http://debian.oregonstate.edu/debian unstable/main armel libatomic1 armel 8.3.0-7 [8948 B]
Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libavahi-common-data amd64 0.7-4+b1 [122 kB]
Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libavahi-common3 amd64 0.7-4+b1 [54.6 kB]
Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libdbus-1-3 amd64 1.12.12-1 [212 kB]
Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libavahi-client3 amd64 0.7-4+b1 [58.1 kB]
Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libbrotli1 amd64 1.0.7-2 [270 kB]
Get:45 http://debian.oregonstate.edu/debian unstable/main armel linux-libc-dev armel 4.19.37-2 [1166 kB]
Get:46 http://debian.oregonstate.edu/debian unstable/main armel libc6-dev armel 2.28-10 [2185 kB]
Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.2.6-1 [105 kB]
Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libpng16-16 amd64 1.6.36-6 [292 kB]
Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libfreetype6 amd64 2.9.1-3 [379 kB]
Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libfontconfig1 amd64 2.13.1-2 [346 kB]
Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libpixman-1-0 amd64 0.36.0-1 [537 kB]
Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libxau6 amd64 1:1.0.8-1+b2 [19.9 kB]
Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB]
Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libxcb1 amd64 1.13.1-2 [137 kB]
Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libx11-data all 2:1.6.7-1 [298 kB]
Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libx11-6 amd64 2:1.6.7-1 [754 kB]
Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libxcb-render0 amd64 1.13.1-2 [109 kB]
Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libxcb-shm0 amd64 1.13.1-2 [99.2 kB]
Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libxext6 amd64 2:1.3.3-1+b2 [52.5 kB]
Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB]
Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libcairo2 amd64 1.16.0-4 [689 kB]
Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libkeyutils1 amd64 1.6-6 [15.0 kB]
Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5support0 amd64 1.17-2 [65.6 kB]
Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libk5crypto3 amd64 1.17-2 [121 kB]
Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1b-2 [1530 kB]
Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5-3 amd64 1.17-2 [368 kB]
Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.17-2 [158 kB]
Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libcups2 amd64 2.2.10-6 [324 kB]
Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libcupsimage2 amd64 2.2.10-6 [132 kB]
Get:70 http://debian.oregonstate.edu/debian unstable/main armel libgomp1 armel 8.3.0-7 [67.1 kB]
Get:71 http://debian.oregonstate.edu/debian unstable/main armel libubsan1 armel 8.3.0-7 [103 kB]
Get:72 http://debian.oregonstate.edu/debian unstable/main armel libgcc-8-dev armel 8.3.0-7 [604 kB]
Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libgraphite2-3 amd64 1.3.13-7 [80.7 kB]
Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libgs9-common all 9.27~dfsg-2 [5135 kB]
Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libidn11 amd64 1.33-2.2 [116 kB]
Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libijs-0.35 amd64 0.35-14 [18.3 kB]
Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libjbig2dec0 amd64 0.16-1 [62.0 kB]
Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libjpeg62-turbo amd64 1:1.5.2-2+b1 [134 kB]
Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 liblcms2-2 amd64 2.9-3 [145 kB]
Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libopenjp2-7 amd64 2.3.0-2 [158 kB]
Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libpaper1 amd64 1.1.26 [20.8 kB]
Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB]
Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libwebp6 amd64 0.6.1-2 [263 kB]
Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libtiff5 amd64 4.0.10-4 [257 kB]
Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libgs9 amd64 9.27~dfsg-2 [2195 kB]
Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libharfbuzz0b amd64 2.3.1-1 [1187 kB]
Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libharfbuzz-icu0 amd64 2.3.1-1 [834 kB]
Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 lsb-base all 10.2019031300 [28.3 kB]
Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 x11-common all 1:7.7+19 [251 kB]
Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libice6 amd64 2:1.0.9-2 [58.7 kB]
Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libkpathsea6 amd64 2018.20181218.49446-2 [167 kB]
Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libpaper-utils amd64 1.1.26 [17.9 kB]
Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 libpotrace0 amd64 1.15-1 [26.3 kB]
Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 libptexenc1 amd64 2018.20181218.49446-2 [61.2 kB]
Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB]
Get:96 http://debian.oregonstate.edu/debian unstable/main armel libstdc++-8-dev armel 8.3.0-7 [1571 kB]
Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 libsynctex2 amd64 2018.20181218.49446-2 [80.7 kB]
Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 libteckit0 amd64 2.5.8+ds2-5 [318 kB]
Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 libtexlua52 amd64 2018.20181218.49446-2 [113 kB]
Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 libtexlua53 amd64 2018.20181218.49446-2 [126 kB]
Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 libtexluajit2 amd64 2018.20181218.49446-2 [256 kB]
Get:102 http://debian.oregonstate.edu/debian unstable/main amd64 libwoff1 amd64 1.0.2-1 [43.2 kB]
Get:103 http://debian.oregonstate.edu/debian unstable/main amd64 libxt6 amd64 1:1.1.5-1+b3 [190 kB]
Get:104 http://debian.oregonstate.edu/debian unstable/main amd64 libxmu6 amd64 2:1.1.2-2+b3 [60.8 kB]
Get:105 http://debian.oregonstate.edu/debian unstable/main amd64 libxpm4 amd64 1:3.5.12-1 [49.1 kB]
Get:106 http://debian.oregonstate.edu/debian unstable/main amd64 libxaw7 amd64 2:1.0.13-1+b2 [201 kB]
Get:107 http://debian.oregonstate.edu/debian unstable/main amd64 libxi6 amd64 2:1.7.9-1 [82.6 kB]
Get:108 http://debian.oregonstate.edu/debian unstable/main amd64 libxxhash0 amd64 0.6.5-3 [7188 B]
Get:109 http://debian.oregonstate.edu/debian unstable/main amd64 libzzip-0-13 amd64 0.13.62-3.2 [55.4 kB]
Get:110 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB]
Get:111 http://debian.oregonstate.edu/debian unstable/main amd64 texlive-binaries amd64 2018.20181218.49446-2 [11.4 MB]
Get:112 http://debian.oregonstate.edu/debian unstable/main amd64 xdg-utils all 1.1.3-1 [73.3 kB]
Get:113 http://debian.oregonstate.edu/debian unstable/main amd64 texlive-base all 2018.20190227-2 [19.7 MB]
Get:114 http://debian.oregonstate.edu/debian unstable/main amd64 texlive-fonts-recommended all 2018.20190227-2 [5228 kB]
Get:115 http://debian.oregonstate.edu/debian unstable/main amd64 texlive-latex-base all 2018.20190227-2 [984 kB]
Get:116 http://debian.oregonstate.edu/debian unstable/main amd64 texlive-latex-recommended all 2018.20190227-2 [15.2 MB]
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Setting up libxau6:amd64 (1:1.0.8-1+b2) ...
Setting up libkeyutils1:amd64 (1.6-6) ...
Setting up libtexlua52:amd64 (2018.20181218.49446-2) ...
Setting up libtexlua53:amd64 (2018.20181218.49446-2) ...
Setting up libarchive-zip-perl (1.64-1) ...
Setting up libglib2.0-0:amd64 (2.58.3-1) ...
No schema files found: doing nothing.
Setting up libssl1.1:amd64 (1.1.1b-2) ...
Setting up libijs-0.35:amd64 (0.35-14) ...
Setting up libtexluajit2:amd64 (2018.20181218.49446-2) ...
Setting up libbrotli1:amd64 (1.0.7-2) ...
Setting up x11-common (1:7.7+19) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up linux-libc-dev:armel (4.19.37-2) ...
Setting up gettext-base (0.19.8.1-9) ...
Setting up libzzip-0-13:amd64 (0.13.62-3.2) ...
Setting up libpaper-utils (1.1.26) ...
Setting up libjbig0:amd64 (2.1-3.1+b2) ...
Setting up poppler-data (0.4.9-2) ...
Setting up libkrb5support0:amd64 (1.17-2) ...
Setting up tex-common (6.11) ...
update-language: texlive-base not installed and configured, doing nothing!
Setting up autotools-dev (20180224.1) ...
Setting up libjpeg62-turbo:amd64 (1:1.5.2-2+b1) ...
Setting up libx11-data (2:1.6.7-1) ...
Setting up libjbig2dec0:amd64 (0.16-1) ...
Setting up libidn11:amd64 (1.33-2.2) ...
Setting up libteckit0:amd64 (2.5.8+ds2-5) ...
Setting up libavahi-common-data:amd64 (0.7-4+b1) ...
Setting up libncurses6:amd64 (6.1+20181013-2) ...
Setting up libdbus-1-3:amd64 (1.12.12-1) ...
Setting up libsigsegv2:amd64 (2.12-2) ...
Setting up t1utils (1.41-3) ...
Setting up libpng16-16:amd64 (1.6.36-6) ...
Setting up gcc-8-base:armel (8.3.0-7) ...
Setting up autopoint (0.19.8.1-9) ...
Setting up libwebp6:amd64 (0.6.1-2) ...
Setting up libcroco3:amd64 (0.6.12-3) ...
Setting up fonts-dejavu-core (2.37-1) ...
Setting up libk5crypto3:amd64 (1.17-2) ...
Setting up libkpathsea6:amd64 (2018.20181218.49446-2) ...
Setting up libxxhash0:amd64 (0.6.5-3) ...
Setting up libuchardet0:amd64 (0.0.6-3) ...
Setting up fonts-lmodern (2.004.5-6) ...
Setting up libopenjp2-7:amd64 (2.3.0-2) ...
Setting up libkrb5-3:amd64 (1.17-2) ...
Setting up libtiff5:amd64 (4.0.10-4) ...
Setting up libbsd0:amd64 (0.9.1-2) ...
Setting up libelf1:amd64 (0.176-1) ...
Setting up xdg-utils (1.1.3-1) ...
Setting up libsynctex2:amd64 (2018.20181218.49446-2) ...
Setting up libpotrace0:amd64 (1.15-1) ...
Setting up libfile-stripnondeterminism-perl (1.1.2-1) ...
Setting up libice6:amd64 (2:1.0.9-2) ...
Setting up libxdmcp6:amd64 (1:1.1.2-3) ...
Setting up libxcb1:amd64 (1.13.1-2) ...
Setting up gettext (0.19.8.1-9) ...
Setting up libwoff1:amd64 (1.0.2-1) ...
Setting up libtool (2.4.6-10) ...
Setting up libxcb-render0:amd64 (1.13.1-2) ...
Setting up fontconfig-config (2.13.1-2) ...
Setting up libavahi-common3:amd64 (0.7-4+b1) ...
Setting up m4 (1.4.18-2) ...
Setting up libxcb-shm0:amd64 (1.13.1-2) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libptexenc1:amd64 (2018.20181218.49446-2) ...
Setting up libfreetype6:amd64 (2.9.1-3) ...
Setting up bsdmainutils (11.1.2+b1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libgssapi-krb5-2:amd64 (1.17-2) ...
Setting up autoconf (2.69-11) ...
Setting up dwz (0.12-3) ...
Setting up groff-base (1.22.4-3) ...
Setting up libx11-6:amd64 (2:1.6.7-1) ...
Setting up libharfbuzz0b:amd64 (2.3.1-1) ...
Setting up libfontconfig1:amd64 (2.13.1-2) ...
Setting up libsm6:amd64 (2:1.2.3-1) ...
Setting up libavahi-client3:amd64 (0.7-4+b1) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libharfbuzz-icu0:amd64 (2.3.1-1) ...
Setting up libxpm4:amd64 (1:3.5.12-1) ...
Setting up libxrender1:amd64 (1:0.9.10-1) ...
Setting up po-debconf (1.0.21) ...
Setting up libxext6:amd64 (2:1.3.3-1+b2) ...
Setting up man-db (2.8.5-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libcairo2:amd64 (1.16.0-4) ...
Setting up libxt6:amd64 (1:1.1.5-1+b3) ...
Setting up libcups2:amd64 (2.2.10-6) ...
Setting up libxmu6:amd64 (2:1.1.2-2+b3) ...
Setting up libxi6:amd64 (2:1.7.9-1) ...
Setting up libxaw7:amd64 (2:1.0.13-1+b2) ...
Setting up libcupsimage2:amd64 (2.2.10-6) ...
Setting up libgs9:amd64 (9.27~dfsg-2) ...
Setting up texlive-binaries (2018.20181218.49446-2) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up texlive-base (2018.20190227-2) ...
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex
tl-paper: setting paper size for dvipdfmx to letter: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for dvips to letter: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for pdftex to letter: /var/lib/texmf/tex/generic/config/pdftexconfig.tex
tl-paper: setting paper size for xdvi to letter: /var/lib/texmf/xdvi/XDvi-paper
Setting up texlive-latex-base (2018.20190227-2) ...
Setting up texlive-latex-recommended (2018.20190227-2) ...
Setting up texlive-fonts-recommended (2018.20190227-2) ...
Setting up dh-autoreconf (19) ...
Setting up libc6:armel (2.28-10) ...
Setting up dh-strip-nondeterminism (1.1.2-1) ...
Setting up libc6-dev:armel (2.28-10) ...
Setting up libgcc1:armel (1:8.3.0-7) ...
Setting up debhelper (12.1.1) ...
Setting up libgomp1:armel (8.3.0-7) ...
Setting up libatomic1:armel (8.3.0-7) ...
Setting up libstdc++6:armel (8.3.0-7) ...
Setting up libasan5:armel (8.3.0-7) ...
Setting up libubsan1:armel (8.3.0-7) ...
Setting up libgcc-8-dev:armel (8.3.0-7) ...
Setting up libstdc++-8-dev:armel (8.3.0-7) ...
Setting up sbuild-build-depends-mummer-dummy:armel (0.invalid.0) ...
Processing triggers for libc-bin (2.28-10) ...
Processing triggers for tex-common (6.11) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
This may take some time... done.
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64)
Toolchain package versions: binutils_2.31.1-16 dpkg-dev_1.19.6 g++-8_8.3.0-7 gcc-8_8.3.0-7 libc6-dev_2.28-10 libstdc++-8-dev_8.3.0-7 libstdc++-8-dev-armel-cross_8.3.0-7cross1 libstdc++6_8.3.0-7 libstdc++6-armel-cross_8.3.0-7cross1 linux-libc-dev_4.19.37-2
Package versions: adduser_3.118 apt_1.8.1 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.3 base-passwd_3.5.46 bash_5.0-4 binutils_2.31.1-16 binutils-arm-linux-gnueabi_2.31.1-16 binutils-common_2.31.1-16 binutils-x86-64-linux-gnu_2.31.1-16 bsdmainutils_11.1.2+b1 bsdutils_1:2.33.1-0.1 build-essential_12.6 bzip2_1.0.6-9 coreutils_8.30-3 cpp_4:8.3.0-1 cpp-8_8.3.0-7 cpp-8-arm-linux-gnueabi_8.3.0-7cross1 cpp-arm-linux-gnueabi_4:8.3.0-1 cross-config_2.6.15-2 crossbuild-essential-armel_12.6 dash_0.5.10.2-5 debconf_1.5.72 debhelper_12.1.1 debian-archive-keyring_2019.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-strip-nondeterminism_1.1.2-1 diffutils_1:3.7-3 dpkg_1.19.6 dpkg-cross_2.6.15-2 dpkg-dev_1.19.6 dwz_0.12-3 e2fsprogs_1.45.1-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-4 findutils_4.6.0+git+20190209-2 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 fonts-lmodern_2.004.5-6 g++_4:8.3.0-1 g++-8_8.3.0-7 g++-8-arm-linux-gnueabi_8.3.0-7cross1 g++-arm-linux-gnueabi_4:8.3.0-1 gcc_4:8.3.0-1 gcc-8_8.3.0-7 gcc-8-arm-linux-gnueabi_8.3.0-7cross1 gcc-8-arm-linux-gnueabi-base_8.3.0-7cross1 gcc-8-base_8.3.0-7 gcc-8-cross-base_8.3.0-7cross1 gcc-arm-linux-gnueabi_4:8.3.0-1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.13-2 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 hostname_3.21 init-system-helpers_1.56+nmu1 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-4 libapt-pkg5.0_1.8.1 libarchive-zip-perl_1.64-1 libasan5_8.3.0-7 libasan5-armel-cross_8.3.0-7cross1 libatomic1_8.3.0-7 libatomic1-armel-cross_8.3.0-7cross1 libattr1_1:2.4.48-4 libaudit-common_1:2.8.4-3 libaudit1_1:2.8.4-3 libavahi-client3_0.7-4+b1 libavahi-common-data_0.7-4+b1 libavahi-common3_0.7-4+b1 libbinutils_2.31.1-16 libblkid1_2.33.1-0.1 libbrotli1_1.0.7-2 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9 libc-bin_2.28-10 libc-dev-bin_2.28-10 libc6_2.28-10 libc6-armel-cross_2.28-10cross2 libc6-dev_2.28-10 libc6-dev-armel-cross_2.28-10cross2 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2 libcc1-0_8.3.0-7 libcom-err2_1.45.1-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.12-3 libcups2_2.2.10-6 libcupsimage2_2.2.10-6 libdb5.3_5.3.28+dfsg1-0.6 libdbus-1-3_1.12.12-1 libdebconfclient0_0.249 libdebian-dpkgcross-perl_2.6.15-2 libdpkg-perl_1.19.6 libelf1_0.176-1 libexpat1_2.2.6-1 libext2fs2_1.45.1-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.1.2-1 libfile-which-perl_1.23-1 libfontconfig1_2.13.1-2 libfreetype6_2.9.1-3 libgcc-8-dev_8.3.0-7 libgcc-8-dev-armel-cross_8.3.0-7cross1 libgcc1_1:8.3.0-7 libgcc1-armel-cross_1:8.3.0-7cross1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-4 libgdbm6_1.18.1-4 libglib2.0-0_2.58.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.7-2 libgomp1_8.3.0-7 libgomp1-armel-cross_8.3.0-7cross1 libgpg-error0_1.35-1 libgraphite2-3_1.3.13-7 libgs9_9.27~dfsg-2 libgs9-common_9.27~dfsg-2 libgssapi-krb5-2_1.17-2 libharfbuzz-icu0_2.3.1-1 libharfbuzz0b_2.3.1-1 libhogweed4_3.4.1-1 libice6_2:1.0.9-2 libicu63_63.1-6 libidn11_1.33-2.2 libidn2-0_2.0.5-1 libijs-0.35_0.35-14 libio-string-perl_1.08-3 libisl19_0.20-2 libitm1_8.3.0-7 libjbig0_2.1-3.1+b2 libjbig2dec0_0.16-1 libjpeg62-turbo_1:1.5.2-2+b1 libk5crypto3_1.17-2 libkeyutils1_1.6-6 libkpathsea6_2018.20181218.49446-2 libkrb5-3_1.17-2 libkrb5support0_1.17-2 liblcms2-2_2.9-3 liblocale-gettext-perl_1.07-3+b4 liblsan0_8.3.0-7 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-4 libmagic1_1:5.35-4 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-7 libncurses6_6.1+20181013-2 libncursesw6_6.1+20181013-2 libnettle6_3.4.1-1 libopenjp2-7_2.3.0-2 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpaper-utils_1.1.26 libpaper1_1.1.26 libpcre3_2:8.39-12 libperl5.28_5.28.1-6 libpipeline1_1.5.1-2 libpixman-1-0_0.36.0-1 libpng16-16_1.6.36-6 libpotrace0_1.15-1 libptexenc1_2018.20181218.49446-2 libquadmath0_8.3.0-7 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.33.1-0.1 libss2_1.45.1-1 libssl1.1_1.1.1b-2 libstdc++-8-dev_8.3.0-7 libstdc++-8-dev-armel-cross_8.3.0-7cross1 libstdc++6_8.3.0-7 libstdc++6-armel-cross_8.3.0-7cross1 libsynctex2_2018.20181218.49446-2 libsystemd0_241-3 libtasn1-6_4.13-3 libteckit0_2.5.8+ds2-5 libtexlua52_2018.20181218.49446-2 libtexlua53_2018.20181218.49446-2 libtexluajit2_2018.20181218.49446-2 libtiff5_4.0.10-4 libtinfo6_6.1+20181013-2 libtool_2.4.6-10 libtsan0_8.3.0-7 libubsan1_8.3.0-7 libubsan1-armel-cross_8.3.0-7cross1 libuchardet0_0.0.6-3 libudev1_241-3 libunistring2_0.9.10-1 libuuid1_2.33.1-0.1 libwebp6_0.6.1-2 libwoff1_1.0.2-1 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1+b2 libxcb-render0_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb1_1.13.1-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxi6_2:1.7.9-1 libxml-libxml-perl_2.0134+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.00+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libxmu6_2:1.1.2-2+b3 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1+b3 libxxhash0_0.6.5-3 libyaml-perl_1.27-1 libzstd1_1.3.8+dfsg-3 libzzip-0-13_0.13.62-3.2 linux-libc-dev_4.19.37-2 linux-libc-dev-armel-cross_4.19.28-2cross2 login_1:4.5-1.1 lsb-base_10.2019031300 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17+b3 mount_2.33.1-0.1 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-6 perl-base_5.28.1-6 perl-modules-5.28_5.28.1-6 po-debconf_1.0.21 poppler-data_0.4.9-2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-essential-dummy_0.invalid.0 sbuild-build-depends-mummer-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-8 t1utils_1.41-3 tar_1.30+dfsg-6 tex-common_6.11 texlive-base_2018.20190227-2 texlive-binaries_2018.20181218.49446-2 texlive-fonts-recommended_2018.20190227-2 texlive-latex-base_2018.20190227-2 texlive-latex-recommended_2018.20190227-2 tzdata_2019a-1 ucf_3.0038+nmu1 util-linux_2.33.1-0.1 x11-common_1:7.7+19 xdg-utils_1.1.3-1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Mon Jun 11 07:02:30 2018 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./mummer_3.23+dfsg-4.dsc
dpkg-source: info: extracting mummer in /<<BUILDDIR>>/mummer-3.23+dfsg
dpkg-source: info: unpacking mummer_3.23+dfsg.orig.tar.xz
dpkg-source: info: unpacking mummer_3.23+dfsg-4.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying 10_install_dirs.patch
dpkg-source: info: applying 02at_docs_web.diff
dpkg-source: info: applying enable_building_with_tetex.patch
dpkg-source: info: applying fix_sf_privacy_breach_issue.patch
dpkg-source: info: applying hardening.patch
dpkg-source: info: applying spelling.patch
dpkg-source: info: applying addition_from_mugsy.patch
dpkg-source: info: applying 0009-improve-performance-of-delta2maf.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
CONFIG_SITE=/etc/dpkg-cross/cross-config.armel
DEB_BUILD_OPTIONS=nocheck
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=POSIX
LOGNAME=helmut
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=unstable-amd64-sbuild
SCHROOT_CHROOT_NAME=unstable-amd64-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=1003
SCHROOT_GROUP=helmut
SCHROOT_SESSION_ID=unstable-amd64-sbuild-2f793382-5c28-4391-8971-ba4c7a122c4e
SCHROOT_UID=1003
SCHROOT_USER=helmut
SHELL=/bin/sh
USER=helmut
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package mummer
dpkg-buildpackage: info: source version 3.23+dfsg-4
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Andreas Tille <tille@debian.org>
dpkg-architecture: warning: specified GNU system type arm-linux-gnueabi does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armel
fakeroot debian/rules clean
dh clean
dh_auto_clean
make -j1 clean
make[1]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg'
csh: not found
rm -f *~ core*
cd /<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz; make clean
make[2]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz'
rm -f *~
cd libbasedir; make clean
make[3]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir'
rm -f *.splint
rm -f *.[oa] *.dbg.o *.inc *.aux *.dvi *.log *~
make[3]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir'
cd streesrc; make clean
make[3]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc'
rm -f *.splint
rm -f *.[aox] *~
make[3]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc'
cd mm3src; make clean
make[3]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/mm3src'
rm -f *.splint
rm -f *.[ox] shit[123] *~
cd /<<BUILDDIR>>/mummer-3.23+dfsg; rm -f maxmat3.x maxmat3.dbg.x mummer
make[3]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/mm3src'
make[2]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz'
cd /<<BUILDDIR>>/mummer-3.23+dfsg/src/tigr; make clean
make[2]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/tigr'
rm -f *.o *~
cd /<<BUILDDIR>>/mummer-3.23+dfsg; rm -f annotate combineMUMs delta-filter gaps mgaps postnuc postpro prenuc prepro repeat-match show-aligns show-coords show-tiling show-snps show-diff delta2blocks delta2maf
cd /<<BUILDDIR>>/mummer-3.23+dfsg/aux_bin; rm -f annotate combineMUMs delta-filter gaps mgaps postnuc postpro prenuc prepro repeat-match show-aligns show-coords show-tiling show-snps show-diff delta2blocks delta2maf
make[2]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/tigr'
cd /<<BUILDDIR>>/mummer-3.23+dfsg/scripts; make clean
make[2]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg/scripts'
csh: not found
rm -f *~
cd /<<BUILDDIR>>/mummer-3.23+dfsg; rm -f exact-tandems mapview mummerplot nucmer promer run-mummer1 run-mummer3 nucmer2xfig dnadiff
make[2]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg/scripts'
cd /<<BUILDDIR>>/mummer-3.23+dfsg/docs; make clean
make[2]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg/docs'
rm -f *.dvi *.aux *.log *.out *~ maxmat3man.pdf
make[2]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg/docs'
make[1]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg'
dh_clean
debian/rules build-arch
dh build-arch
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg'
[ -d /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin ] || mkdir -p /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin
[ -d /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer ] || mkdir -p /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer
dh_auto_build -- BIN_DIR=/<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin AUX_BIN_DIR=/<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer \
FINAL_BIN_DIR=/usr/bin FINAL_AUX_BIN_DIR=/usr/lib/mummer \
FINAL_SCRIPT_DIR=/usr/share/perl5/ \
CFLAGS="-g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc" CXXFLAGS="-g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now"
make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabi-pkg-config CXX=arm-linux-gnueabi-g\+\+ CC=arm-linux-gnueabi-gcc BIN_DIR=/<<BUILDDIR>>/mummer-3.23\+dfsg/debian/tmp/usr/bin AUX_BIN_DIR=/<<BUILDDIR>>/mummer-3.23\+dfsg/debian/tmp/usr/lib/mummer FINAL_BIN_DIR=/usr/bin FINAL_AUX_BIN_DIR=/usr/lib/mummer FINAL_SCRIPT_DIR=/usr/share/perl5/ "CFLAGS=-g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc" "CXXFLAGS=-g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security" "LDFLAGS=-Wl,-z,relro -Wl,-z,now"
make[2]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg'
csh: not found
cd /<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz; make mummer
make[3]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz'
cd libbasedir; make libbase.a
make[4]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir'
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cleanMUMcand.o cleanMUMcand.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o clock.o clock.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mapfile.o mapfile.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multiseq.o multiseq.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o procopt.o procopt.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o safescpy.o safescpy.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o seterror.o seterror.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o space.o space.c
ar sruv libbase.a cleanMUMcand.o clock.o mapfile.o multiseq.o procopt.o safescpy.o seterror.o space.o
ar: `u' modifier ignored since `D' is the default (see `U')
ar: creating libbase.a
a - cleanMUMcand.o
a - clock.o
a - mapfile.o
a - multiseq.o
a - procopt.o
a - safescpy.o
a - seterror.o
a - space.o
make[4]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir'
cd streesrc; make libstree.a
make[4]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc'
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o construct.o construct.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o access.o access.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o scanpref.o scanpref.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o linkloc.o linkloc.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o depthtab.o depthtab.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ex2leav.o ex2leav.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dfs.o dfs.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o overmax.o overmax.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o oversucc.o oversucc.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o addleafcount.o addleafcount.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o iterator.o iterator.c
ar sruv libstree.a construct.o access.o scanpref.o linkloc.o depthtab.o ex2leav.o dfs.o overmax.o oversucc.o addleafcount.o iterator.o
ar: `u' modifier ignored since `D' is the default (see `U')
ar: creating libstree.a
a - construct.o
a - access.o
a - scanpref.o
a - linkloc.o
a - depthtab.o
a - ex2leav.o
a - dfs.o
a - overmax.o
a - oversucc.o
a - addleafcount.o
a - iterator.o
make[4]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc'
cd mm3src; make mummer
make[4]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/mm3src'
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -I../streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maxmat3.o maxmat3.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -I../streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maxmatopt.o maxmatopt.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -I../streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maxmatinp.o maxmatinp.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -I../streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o findmumcand.o findmumcand.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -I../streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o findmaxmat.o findmaxmat.c
arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -I../streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o procmaxmat.o procmaxmat.c
arm-linux-gnueabi-gcc -Wl,-z,relro -Wl,-z,now maxmat3.o maxmatopt.o maxmatinp.o findmumcand.o findmaxmat.o procmaxmat.o ../streesrc/libstree.a ../libbasedir/libbase.a \
-o /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/mummer; chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/mummer
make[4]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/mm3src'
make[3]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz'
cd /<<BUILDDIR>>/mummer-3.23+dfsg/src/tigr; make CFLAGS="-g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<<BUILDDIR>>/mummer-3.23+dfsg/src/kurtz/streesrc" CXXFLAGS="-g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" all
make[3]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/tigr'
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security tigrinc.cc -c -o tigrinc.o
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now annotate.cc tigrinc.o -o /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/annotate; chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/annotate
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now combineMUMs.cc tigrinc.o -o /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/combineMUMs; chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/combineMUMs
combineMUMs.cc:26:38: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
#define DEFAULT_ERROR_FILE_NAME "witherrors.gaps"
^~~~~~~~~~~~~~~~~
combineMUMs.cc:109:27: note: in expansion of macro 'DEFAULT_ERROR_FILE_NAME'
char * Error_File_Name = DEFAULT_ERROR_FILE_NAME;
^~~~~~~~~~~~~~~~~~~~~~~
combineMUMs.cc:135:24: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
char * Query_Suffix = "Query";
^~~~~~~
combineMUMs.cc:145:22: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
char * Ref_Suffix = "Ref";
^~~~~
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security delta.cc -c -o delta.o
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now delta-filter.cc tigrinc.o delta.o -o /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/delta-filter; chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/delta-filter
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now gaps.cc tigrinc.o -o /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/gaps; chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/gaps
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now mgaps.cc tigrinc.o -o /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/mgaps; chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/mgaps
mgaps.cc: In function 'int Process_Cluster(Match_t*, int, char*)':
mgaps.cc:533:20: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
label = "#\n";
^~~~~
mgaps.cc: In function 'void Process_Matches(Match_t*, int, char*)':
mgaps.cc:620:19: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
label = "#\n";
^~~~~
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security sw_align.cc -c -o sw_align.o
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now postnuc.cc tigrinc.o sw_align.o -o /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer/postnuc; chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer/postnuc
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security translate.cc -c -o translate.o
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now postpro.cc tigrinc.o sw_align.o translate.o -o /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer/postpro; chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer/postpro
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now prenuc.cc tigrinc.o -o /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer/prenuc; chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer/prenuc
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now prepro.cc tigrinc.o translate.o -o /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer/prepro; chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer/prepro
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now repeat-match.cc tigrinc.o -o /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/repeat-match; chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/repeat-match
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now show-aligns.cc tigrinc.o translate.o delta.o -o /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-aligns; chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-aligns
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now show-coords.cc tigrinc.o delta.o -o /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-coords; chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-coords
show-coords.cc: In function 'void printBtab(std::vector<AlignStats>)':
show-coords.cc:799:12: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
type = "NUCMER";
^~~~~~~~
show-coords.cc:801:12: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
type = "PROMER";
^~~~~~~~
show-coords.cc:803:12: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
type = "NULL";
^~~~~~
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now show-tiling.cc tigrinc.o delta.o -o /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-tiling; chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-tiling
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now show-snps.cc tigrinc.o translate.o delta.o -o /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-snps; chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-snps
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now show-diff.cc tigrinc.o delta.o -o /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-diff; chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-diff
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now delta2blocks.cc tigrinc.o translate.o delta.o -o /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/delta2blocks; chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/delta2blocks
delta2blocks.cc: In function 'void printAlignments(std::vector<AlignStats>, char*, char*, char*, char*)':
delta2blocks.cc:408:15: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=]
printf ("%s %s %d %d %d %d ",IdR,IdQ, Ap->sR,Ap->eR,Ap->sQ,Ap->eQ);
^~~~~~~~~~~~~~~~~~~~ ~~~~~~
delta2blocks.cc:408:15: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long int' [-Wformat=]
delta2blocks.cc:408:15: warning: format '%d' expects argument of type 'int', but argument 6 has type 'long int' [-Wformat=]
delta2blocks.cc:408:15: warning: format '%d' expects argument of type 'int', but argument 7 has type 'long int' [-Wformat=]
arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now delta2maf.cc tigrinc.o translate.o delta.o -o /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/delta2maf; chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/delta2maf
delta2maf.cc: In function 'void printAlignments(std::vector<AlignStats>, char*, char*, std::map<std::__cxx11::basic_string<char>, char*>&)':
delta2maf.cc:547:14: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long int' [-Wformat=]
printf("a score=%d\n",abs(Ap->eR - Ap->sR));
^~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~~~~~~
delta2maf.cc:587:13: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=]
printf("s %s %d %d %s %d ", IdQ, sQ-1, eQ-sQ+1, "-",SeqLenQ);
^~~~~~~~~~~~~~~~~~~ ~~~~
delta2maf.cc:587:13: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=]
delta2maf.cc:587:13: warning: format '%d' expects argument of type 'int', but argument 6 has type 'long int' [-Wformat=]
delta2maf.cc:590:13: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=]
printf("s %s %d %d %s %d ", IdQ, sQ-1, eQ-sQ+1, "+",SeqLenQ);
^~~~~~~~~~~~~~~~~~~ ~~~~
delta2maf.cc:590:13: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=]
delta2maf.cc:590:13: warning: format '%d' expects argument of type 'int', but argument 6 has type 'long int' [-Wformat=]
delta2maf.cc:597:13: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=]
printf("s %s %d %d %s %d ", IdR, sR-1, eR-sR+1, "-",SeqLenR);
^~~~~~~~~~~~~~~~~~~ ~~~~
delta2maf.cc:597:13: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=]
delta2maf.cc:597:13: warning: format '%d' expects argument of type 'int', but argument 6 has type 'long int' [-Wformat=]
delta2maf.cc:600:13: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=]
printf("s %s %d %d %s %d ", IdR, sR-1, eR-sR+1, "+",SeqLenR);
^~~~~~~~~~~~~~~~~~~ ~~~~
delta2maf.cc:600:13: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=]
delta2maf.cc:600:13: warning: format '%d' expects argument of type 'int', but argument 6 has type 'long int' [-Wformat=]
delta2maf.cc:633:11: warning: format '%s' expects argument of type 'char*', but argument 2 has type 'char (*)[(Screen_Width + 1)]' [-Wformat=]
printf("%s", &Buff2);
^~~~ ~~~~~~
delta2maf.cc:637:11: warning: format '%s' expects argument of type 'char*', but argument 2 has type 'char (*)[(Screen_Width + 1)]' [-Wformat=]
printf("%s", &Buff1);
^~~~ ~~~~~~
delta2maf.cc:659:12: warning: format '%s' expects argument of type 'char*', but argument 2 has type 'char (*)[(Screen_Width + 1)]' [-Wformat=]
printf("%s", &Buff2);
^~~~ ~~~~~~
delta2maf.cc:663:12: warning: format '%s' expects argument of type 'char*', but argument 2 has type 'char (*)[(Screen_Width + 1)]' [-Wformat=]
printf("%s", &Buff1);
^~~~ ~~~~~~
delta2maf.cc:710:14: warning: format '%s' expects argument of type 'char*', but argument 2 has type 'char (*)[(Screen_Width + 1)]' [-Wformat=]
printf("%s", &Buff2);
^~~~ ~~~~~~
delta2maf.cc:714:14: warning: format '%s' expects argument of type 'char*', but argument 2 has type 'char (*)[(Screen_Width + 1)]' [-Wformat=]
printf("%s", &Buff1);
^~~~ ~~~~~~
delta2maf.cc:732:15: warning: format '%s' expects argument of type 'char*', but argument 2 has type 'char (*)[(Screen_Width + 1)]' [-Wformat=]
printf("%s", &Buff2);
^~~~ ~~~~~~
delta2maf.cc:736:15: warning: format '%s' expects argument of type 'char*', but argument 2 has type 'char (*)[(Screen_Width + 1)]' [-Wformat=]
printf("%s", &Buff1);
^~~~ ~~~~~~
make[3]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg/src/tigr'
cd /<<BUILDDIR>>/mummer-3.23+dfsg/scripts; make all
make[3]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg/scripts'
csh: not found
cp -a ../debian/sh-replacement-scripts/exact-tandems /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin
chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/exact-tandems
/bin/sed -e 's?__PERL_PATH?/usr/bin/perl?g' \
-e 's?__SCRIPT_DIR?/usr/share/perl5/?g' \
mapview.pl > /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/mapview
chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/mapview
/bin/sed -e 's?__PERL_PATH?/usr/bin/perl?g' \
-e 's?__SCRIPT_DIR?/usr/share/perl5/?g' \
-e 's?__BIN_DIR?/usr/bin?g' \
mummerplot.pl > /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/mummerplot
chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/mummerplot
/bin/sed -e 's?__PERL_PATH?/usr/bin/perl?g' \
-e 's?__SCRIPT_DIR?/usr/share/perl5/?g' \
-e 's?__AUX_BIN_DIR?/usr/lib/mummer?g' \
-e 's?__BIN_DIR?/usr/bin?g' \
nucmer.pl > /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/nucmer
chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/nucmer
/bin/sed -e 's?__PERL_PATH?/usr/bin/perl?g' \
-e 's?__SCRIPT_DIR?/usr/share/perl5/?g' \
-e 's?__AUX_BIN_DIR?/usr/lib/mummer?g' \
-e 's?__BIN_DIR?/usr/bin?g' \
promer.pl > /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/promer
chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/promer
cp -a ../debian/sh-replacement-scripts/run-mummer1 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin
chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/run-mummer1
cp -a ../debian/sh-replacement-scripts/run-mummer3 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin
chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/run-mummer3
/bin/sed -e 's?__PERL_PATH?/usr/bin/perl?g' \
nucmer2xfig.pl > /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/nucmer2xfig
chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/nucmer2xfig
/bin/sed -e 's?__PERL_PATH?/usr/bin/perl?g' \
-e 's?__SCRIPT_DIR?/usr/share/perl5/?g' \
-e 's?__BIN_DIR?/usr/bin?g' \
dnadiff.pl > /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/dnadiff
chmod 755 /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/dnadiff
make[3]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg/scripts'
make[2]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg'
/usr/bin/make -C docs
make[2]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg/docs'
pdflatex maxmat3man
This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex)
restricted \write18 enabled.
entering extended mode
(./maxmat3man.tex
LaTeX2e <2018-12-01>
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LaTeX Warning: There were undefined references.
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Output written on maxmat3man.pdf (7 pages, 133956 bytes).
Transcript written on maxmat3man.log.
pdflatex maxmat3man
This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex)
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entering extended mode
(./maxmat3man.tex
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(see the transcript file for additional information){/usr/share/texlive/texmf-d
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Output written on maxmat3man.pdf (7 pages, 133281 bytes).
Transcript written on maxmat3man.log.
make[2]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg/docs'
make[1]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg'
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg'
/usr/bin/make check
make[2]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg'
csh: not found
ERROR: 'csh' C-shell not found
check complete
make[2]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg'
make[1]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg'
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch
dh_testroot -a
debian/rules override_dh_prep
make[1]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg'
dh_prep -X debian/tmp
make[1]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg'
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg'
mv /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/annotate /<<BUILDDIR>>/mummer-3.23+dfsg/debian/tmp/usr/bin/mummer-annotate
make[1]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg'
dh_install -a
dh_installdocs -a
dh_installchangelogs -a
dh_installexamples -a
dh_installman -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
debian/rules override_dh_compress
make[1]: Entering directory '/<<BUILDDIR>>/mummer-3.23+dfsg'
dh_compress -Xpdf
make[1]: Leaving directory '/<<BUILDDIR>>/mummer-3.23+dfsg'
dh_fixperms -a
dh_missing -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: debian/mummer/usr/bin/delta-filter contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/mummer/usr/bin/delta2blocks contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/mummer/usr/bin/show-tiling contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/mummer/usr/bin/show-coords contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/mummer/usr/bin/show-snps contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/mummer/usr/bin/delta2maf contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/mummer/usr/bin/mummer-annotate contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/mummer/usr/bin/show-aligns contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/mummer/usr/bin/show-diff contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'mummer' in '../mummer_3.23+dfsg-4_armel.deb'.
dpkg-deb: building package 'mummer-dbgsym' in '../mummer-dbgsym_3.23+dfsg-4_armel.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any >../mummer_3.23+dfsg-4_armel.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2019-05-16T08:59:08Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
lintian
-------
Setup apt archive
-----------------
Merged Build-Depends: lintian:amd64
Filtered Build-Depends: lintian:amd64
dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<<BUILDDIR>>/resolver-wpVEgp/apt_archive/sbuild-build-depends-lintian-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-lintian-dummy sbuild-build-depends-mummer-dummy
dpkg-scanpackages: info: Wrote 4 entries to output Packages file.
Ign:1 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ Release [963 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ Sources [779 B]
Get:5 copy:/<<BUILDDIR>>/resolver-wpVEgp/apt_archive ./ Packages [861 B]
Fetched 2603 B in 0s (129 kB/s)
Reading package lists...
Reading package lists...
Install lintian build dependencies (apt-based resolver)
-------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl
libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl
libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl
libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl
libio-pty-perl libio-socket-ssl-perl libipc-run-perl
libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl
libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl
libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl
libreadline7 libsqlite3-0 libstruct-dumb-perl libsub-name-perl
libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl
libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils
perl-openssl-defaults readline-common
Suggested packages:
libdata-dump-perl ca-certificates libhtml-template-perl libwww-perl
binutils-multiarch libtext-template-perl readline-doc
Recommended packages:
gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl
libsereal-perl libtest-fatal-perl libtest-refcount-perl
libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl
libauthen-sasl-perl libunicode-utf8-perl libperlio-gzip-perl
The following NEW packages will be installed:
diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl
libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl
libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl
libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl
libio-pty-perl libio-socket-ssl-perl libipc-run-perl
libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl
libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl
libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl
libreadline7 libsqlite3-0 libstruct-dumb-perl libsub-name-perl
libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl
libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils
perl-openssl-defaults readline-common
sbuild-build-depends-lintian-dummy:armel
0 upgraded, 46 newly installed, 0 to remove and 0 not upgraded.
Need to get 6169 kB of archives.
After this operation, 16.2 MB of additional disk space will be used.
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Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 5.6 [19.4 kB]
Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 7.0-5 [70.6 kB]
Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.62-1 [33.4 kB]
Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.2-1 [49.4 kB]
Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline7 amd64 7.0-5 [151 kB]
Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.13-2 [512 kB]
Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.27.2-2 [640 kB]
Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.13-2 [866 kB]
Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.34+b1 [71.2 kB]
Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB]
Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB]
Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB]
Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB]
Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.40-1 [222 kB]
Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.21-1+b3 [13.6 kB]
Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB]
Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.41-1+b1 [14.6 kB]
Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB]
Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB]
Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 3 [6782 B]
Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.85-2+b1 [308 kB]
Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.060-3 [207 kB]
Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B]
Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.18-1 [88.5 kB]
Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB]
Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.19-1 [372 kB]
Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB]
Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB]
Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB]
Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB]
Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB]
Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.39-1 [74.5 kB]
Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB]
Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.72-1 [262 kB]
Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b5 [33.7 kB]
Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-1 [101 kB]
Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b4 [64.2 kB]
Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libparse-debianchangelog-perl all 1.2.0-13 [59.5 kB]
Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB]
Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB]
Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB]
Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB]
Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.76+repack-1 [33.1 kB]
Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2 [90.4 kB]
Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.13.0 [1175 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 6169 kB in 0s (27.9 MB/s)
Selecting previously unselected package netbase.
(Reading database ... 28632 files and directories currently installed.)
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Unpacking netbase (5.6) ...
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Unpacking readline-common (7.0-5) ...
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Unpacking diffstat (1.62-1) ...
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Unpacking libassuan0:amd64 (2.5.2-1) ...
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Setting up libhtml-tagset-perl (3.20-3) ...
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Setting up patchutils (0.3.4-2) ...
Setting up libdigest-hmac-perl (1.03+dfsg-2) ...
Setting up libipc-system-simple-perl (1.25-4) ...
Setting up libnet-domain-tld-perl (1.75-1) ...
Setting up diffstat (1.62-1) ...
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Setting up libcapture-tiny-perl (0.48-1) ...
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Setting up libsub-name-perl (0.21-1+b3) ...
Setting up libpath-tiny-perl (0.108-1) ...
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Setting up libclass-accessor-perl (0.51-1) ...
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Setting up readline-common (7.0-5) ...
Setting up liburi-perl (1.76-1) ...
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Setting up libfile-basedir-perl (0.08-1) ...
Setting up liblist-moreutils-perl (0.416-1+b4) ...
Setting up libnet-dns-perl (1.19-1) ...
Setting up libhtml-parser-perl (3.72-3+b3) ...
Setting up gpgconf (2.2.13-2) ...
Setting up libio-socket-ssl-perl (2.060-3) ...
Setting up gpg (2.2.13-2) ...
Setting up libcgi-pm-perl (4.40-1) ...
Setting up libnet-smtp-ssl-perl (1.04-1) ...
Setting up libmailtools-perl (2.18-1) ...
Setting up libparse-debianchangelog-perl (1.2.0-13) ...
Setting up libemail-valid-perl (1.202-1) ...
Setting up lintian (2.13.0) ...
Setting up sbuild-build-depends-lintian-dummy:armel (0.invalid.0) ...
Processing triggers for man-db (2.8.5-2) ...
Not building database; man-db/auto-update is not 'true'.
Processing triggers for libc-bin (2.28-10) ...
I: Lintian run was successful.
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
mummer_3.23+dfsg-4_armel.changes:
---------------------------------
Format: 1.8
Date: Mon, 11 Jun 2018 08:38:49 +0200
Source: mummer
Binary: mummer mummer-dbgsym
Built-For-Profiles: cross nocheck
Architecture: armel
Version: 3.23+dfsg-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
mummer - Efficient sequence alignment of full genomes
Closes: 901261
Changes:
mummer (3.23+dfsg-4) unstable; urgency=medium
.
[ Helmut Grohne ]
* Fix FTCBFS: Let dh_auto_build pass cross tools to make. (Closes: #901261)
.
[ Andreas Tille ]
* Standards-Version: 4.1.4
* Point Vcs-fields to Salsa
* debhelper 11
* doc-base: debhelper 11 moves docs to /usr/share/doc/mummer - adapt path
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+------------------------------------------------------------------------------+
| Buildinfo |
+------------------------------------------------------------------------------+
Format: 1.0
Source: mummer
Binary: mummer mummer-doc
Architecture: armel
Version: 3.23+dfsg-4
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Build-Origin: Debian
Build-Architecture: amd64
Build-Date: Thu, 16 May 2019 08:59:07 +0000
Build-Path: /<<BUILDDIR>>/mummer-3.23+dfsg
Installed-Build-Depends:
autoconf (= 2.69-11),
automake (= 1:1.16.1-4),
autopoint (= 0.19.8.1-9),
autotools-dev (= 20180224.1),
base-files (= 10.3),
base-passwd (= 3.5.46),
bash (= 5.0-4),
binutils (= 2.31.1-16),
binutils-common (= 2.31.1-16),
binutils-x86-64-linux-gnu (= 2.31.1-16),
bsdmainutils (= 11.1.2+b1),
bsdutils (= 1:2.33.1-0.1),
build-essential (= 12.6),
bzip2 (= 1.0.6-9),
coreutils (= 8.30-3),
cpp (= 4:8.3.0-1),
cpp-8 (= 8.3.0-7),
dash (= 0.5.10.2-5),
debconf (= 1.5.72),
debhelper (= 12.1.1),
debianutils (= 4.8.6.1),
dh-autoreconf (= 19),
dh-strip-nondeterminism (= 1.1.2-1),
diffutils (= 1:3.7-3),
dpkg (= 1.19.6),
dpkg-dev (= 1.19.6),
dwz (= 0.12-3),
fdisk (= 2.33.1-0.1),
file (= 1:5.35-4),
findutils (= 4.6.0+git+20190209-2),
fontconfig-config (= 2.13.1-2),
fonts-dejavu-core (= 2.37-1),
fonts-lmodern (= 2.004.5-6),
g++ (= 4:8.3.0-1),
g++-8 (= 8.3.0-7),
gcc (= 4:8.3.0-1),
gcc-8 (= 8.3.0-7),
gcc-8-base (= 8.3.0-7),
gettext (= 0.19.8.1-9),
gettext-base (= 0.19.8.1-9),
grep (= 3.3-1),
groff-base (= 1.22.4-3),
gzip (= 1.9-3),
hostname (= 3.21),
init-system-helpers (= 1.56+nmu1),
intltool-debian (= 0.35.0+20060710.5),
libacl1 (= 2.2.53-4),
libarchive-zip-perl (= 1.64-1),
libasan5 (= 8.3.0-7),
libatomic1 (= 8.3.0-7),
libattr1 (= 1:2.4.48-4),
libaudit-common (= 1:2.8.4-3),
libaudit1 (= 1:2.8.4-3),
libavahi-client3 (= 0.7-4+b1),
libavahi-common-data (= 0.7-4+b1),
libavahi-common3 (= 0.7-4+b1),
libbinutils (= 2.31.1-16),
libblkid1 (= 2.33.1-0.1),
libbrotli1 (= 1.0.7-2),
libbsd0 (= 0.9.1-2),
libbz2-1.0 (= 1.0.6-9),
libc-bin (= 2.28-10),
libc-dev-bin (= 2.28-10),
libc6 (= 2.28-10),
libc6-dev (= 2.28-10),
libcairo2 (= 1.16.0-4),
libcap-ng0 (= 0.7.9-2),
libcc1-0 (= 8.3.0-7),
libcom-err2 (= 1.45.1-1),
libcroco3 (= 0.6.12-3),
libcups2 (= 2.2.10-6),
libcupsimage2 (= 2.2.10-6),
libdb5.3 (= 5.3.28+dfsg1-0.6),
libdbus-1-3 (= 1.12.12-1),
libdebconfclient0 (= 0.249),
libdpkg-perl (= 1.19.6),
libelf1 (= 0.176-1),
libexpat1 (= 2.2.6-1),
libfdisk1 (= 2.33.1-0.1),
libffi6 (= 3.2.1-9),
libfile-stripnondeterminism-perl (= 1.1.2-1),
libfontconfig1 (= 2.13.1-2),
libfreetype6 (= 2.9.1-3),
libgcc-8-dev (= 8.3.0-7),
libgcc1 (= 1:8.3.0-7),
libgcrypt20 (= 1.8.4-5),
libgdbm-compat4 (= 1.18.1-4),
libgdbm6 (= 1.18.1-4),
libglib2.0-0 (= 2.58.3-1),
libgmp10 (= 2:6.1.2+dfsg-4),
libgnutls30 (= 3.6.7-2),
libgomp1 (= 8.3.0-7),
libgpg-error0 (= 1.35-1),
libgraphite2-3 (= 1.3.13-7),
libgs9 (= 9.27~dfsg-2),
libgs9-common (= 9.27~dfsg-2),
libgssapi-krb5-2 (= 1.17-2),
libharfbuzz-icu0 (= 2.3.1-1),
libharfbuzz0b (= 2.3.1-1),
libhogweed4 (= 3.4.1-1),
libice6 (= 2:1.0.9-2),
libicu63 (= 63.1-6),
libidn11 (= 1.33-2.2),
libidn2-0 (= 2.0.5-1),
libijs-0.35 (= 0.35-14),
libisl19 (= 0.20-2),
libitm1 (= 8.3.0-7),
libjbig0 (= 2.1-3.1+b2),
libjbig2dec0 (= 0.16-1),
libjpeg62-turbo (= 1:1.5.2-2+b1),
libk5crypto3 (= 1.17-2),
libkeyutils1 (= 1.6-6),
libkpathsea6 (= 2018.20181218.49446-2),
libkrb5-3 (= 1.17-2),
libkrb5support0 (= 1.17-2),
liblcms2-2 (= 2.9-3),
liblsan0 (= 8.3.0-7),
liblz4-1 (= 1.8.3-1),
liblzma5 (= 5.2.4-1),
libmagic-mgc (= 1:5.35-4),
libmagic1 (= 1:5.35-4),
libmount1 (= 2.33.1-0.1),
libmpc3 (= 1.1.0-1),
libmpfr6 (= 4.0.2-1),
libmpx2 (= 8.3.0-7),
libncurses6 (= 6.1+20181013-2),
libncursesw6 (= 6.1+20181013-2),
libnettle6 (= 3.4.1-1),
libopenjp2-7 (= 2.3.0-2),
libp11-kit0 (= 0.23.15-2),
libpam-modules (= 1.3.1-5),
libpam-modules-bin (= 1.3.1-5),
libpam-runtime (= 1.3.1-5),
libpam0g (= 1.3.1-5),
libpaper-utils (= 1.1.26),
libpaper1 (= 1.1.26),
libpcre3 (= 2:8.39-12),
libperl5.28 (= 5.28.1-6),
libpipeline1 (= 1.5.1-2),
libpixman-1-0 (= 0.36.0-1),
libpng16-16 (= 1.6.36-6),
libpotrace0 (= 1.15-1),
libptexenc1 (= 2018.20181218.49446-2),
libquadmath0 (= 8.3.0-7),
libseccomp2 (= 2.3.3-4),
libselinux1 (= 2.8-1+b1),
libsigsegv2 (= 2.12-2),
libsm6 (= 2:1.2.3-1),
libsmartcols1 (= 2.33.1-0.1),
libssl1.1 (= 1.1.1b-2),
libstdc++-8-dev (= 8.3.0-7),
libstdc++6 (= 8.3.0-7),
libsynctex2 (= 2018.20181218.49446-2),
libsystemd0 (= 241-3),
libtasn1-6 (= 4.13-3),
libteckit0 (= 2.5.8+ds2-5),
libtexlua52 (= 2018.20181218.49446-2),
libtexlua53 (= 2018.20181218.49446-2),
libtexluajit2 (= 2018.20181218.49446-2),
libtiff5 (= 4.0.10-4),
libtinfo6 (= 6.1+20181013-2),
libtool (= 2.4.6-10),
libtsan0 (= 8.3.0-7),
libubsan1 (= 8.3.0-7),
libuchardet0 (= 0.0.6-3),
libudev1 (= 241-3),
libunistring2 (= 0.9.10-1),
libuuid1 (= 2.33.1-0.1),
libwebp6 (= 0.6.1-2),
libwoff1 (= 1.0.2-1),
libx11-6 (= 2:1.6.7-1),
libx11-data (= 2:1.6.7-1),
libxau6 (= 1:1.0.8-1+b2),
libxaw7 (= 2:1.0.13-1+b2),
libxcb-render0 (= 1.13.1-2),
libxcb-shm0 (= 1.13.1-2),
libxcb1 (= 1.13.1-2),
libxdmcp6 (= 1:1.1.2-3),
libxext6 (= 2:1.3.3-1+b2),
libxi6 (= 2:1.7.9-1),
libxml2 (= 2.9.4+dfsg1-7+b3),
libxmu6 (= 2:1.1.2-2+b3),
libxpm4 (= 1:3.5.12-1),
libxrender1 (= 1:0.9.10-1),
libxt6 (= 1:1.1.5-1+b3),
libxxhash0 (= 0.6.5-3),
libzstd1 (= 1.3.8+dfsg-3),
libzzip-0-13 (= 0.13.62-3.2),
linux-libc-dev (= 4.19.37-2),
login (= 1:4.5-1.1),
lsb-base (= 10.2019031300),
m4 (= 1.4.18-2),
make (= 4.2.1-1.2),
man-db (= 2.8.5-2),
mawk (= 1.3.3-17+b3),
ncurses-base (= 6.1+20181013-2),
ncurses-bin (= 6.1+20181013-2),
patch (= 2.7.6-3),
perl (= 5.28.1-6),
perl-base (= 5.28.1-6),
perl-modules-5.28 (= 5.28.1-6),
po-debconf (= 1.0.21),
poppler-data (= 0.4.9-2),
sed (= 4.7-1),
sensible-utils (= 0.0.12),
sysvinit-utils (= 2.93-8),
t1utils (= 1.41-3),
tar (= 1.30+dfsg-6),
tex-common (= 6.11),
texlive-base (= 2018.20190227-2),
texlive-binaries (= 2018.20181218.49446-2),
texlive-fonts-recommended (= 2018.20190227-2),
texlive-latex-base (= 2018.20190227-2),
texlive-latex-recommended (= 2018.20190227-2),
ucf (= 3.0038+nmu1),
util-linux (= 2.33.1-0.1),
x11-common (= 1:7.7+19),
xdg-utils (= 1.1.3-1),
xz-utils (= 5.2.4-1),
zlib1g (= 1:1.2.11.dfsg-1)
Environment:
DEB_BUILD_OPTIONS="nocheck parallel=1"
DEB_BUILD_PROFILES="cross nocheck"
LANG="en_US.UTF-8"
LC_ALL="POSIX"
SOURCE_DATE_EPOCH="1528699129"
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
mummer-dbgsym_3.23+dfsg-4_armel.deb
-----------------------------------
new Debian package, version 2.0.
size 4180348 bytes: control archive=1368 bytes.
1072 bytes, 12 lines control
1908 bytes, 18 lines md5sums
Package: mummer-dbgsym
Source: mummer
Version: 3.23+dfsg-4
Auto-Built-Package: debug-symbols
Architecture: armel
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 4392
Depends: mummer (= 3.23+dfsg-4)
Section: debug
Priority: optional
Description: debug symbols for mummer
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mummer_3.23+dfsg-4_armel.deb
----------------------------
new Debian package, version 2.0.
size 779320 bytes: control archive=2636 bytes.
1093 bytes, 21 lines control
4473 bytes, 63 lines md5sums
Package: mummer
Version: 3.23+dfsg-4
Architecture: armel
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1751
Depends: libc6 (>= 2.7), libgcc1 (>= 1:3.5), libstdc++6 (>= 5.2), perl, gawk
Section: science
Priority: optional
Homepage: http://mummer.sourceforge.net/
Description: Efficient sequence alignment of full genomes
MUMmer is a system for rapidly aligning entire genomes, whether
in complete or draft form. For example, MUMmer 3.0 can find all
20-basepair or longer exact matches between a pair of 5-megabase genomes
in 13.7 seconds, using 78 MB of memory, on a 2.4 GHz Linux desktop
computer. MUMmer can also align incomplete genomes; it handles the 100s
or 1000s of contigs from a shotgun sequencing project with ease, and
will align them to another set of contigs or a genome using the NUCmer
program included with the system. If the species are too divergent for
DNA sequence alignment to detect similarity, then the PROmer program
can generate alignments based upon the six-frame translations of both
input sequences.
drwxr-xr-x root/root 0 2018-06-11 06:38 ./
drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/
drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/bin/
-rwxr-xr-x root/root 42472 2018-06-11 06:38 ./usr/bin/combineMUMs
-rwxr-xr-x root/root 54744 2018-06-11 06:38 ./usr/bin/delta-filter
-rwxr-xr-x root/root 71132 2018-06-11 06:38 ./usr/bin/delta2blocks
-rwxr-xr-x root/root 95712 2018-06-11 06:38 ./usr/bin/delta2maf
-rwxr-xr-x root/root 26821 2018-06-11 06:38 ./usr/bin/dnadiff
-rwxr-xr-x root/root 766 2018-06-11 06:38 ./usr/bin/exact-tandems
-rwxr-xr-x root/root 17872 2018-06-11 06:38 ./usr/bin/gaps
-rwxr-xr-x root/root 29757 2018-06-11 06:38 ./usr/bin/mapview
-rwxr-xr-x root/root 17896 2018-06-11 06:38 ./usr/bin/mgaps
-rwxr-xr-x root/root 50588 2018-06-11 06:38 ./usr/bin/mummer
-rwxr-xr-x root/root 21968 2018-06-11 06:38 ./usr/bin/mummer-annotate
-rwxr-xr-x root/root 49694 2018-06-11 06:38 ./usr/bin/mummerplot
-rwxr-xr-x root/root 12390 2018-06-11 06:38 ./usr/bin/nucmer
-rwxr-xr-x root/root 5884 2018-06-11 06:38 ./usr/bin/nucmer2xfig
-rwxr-xr-x root/root 11898 2018-06-11 06:38 ./usr/bin/promer
-rwxr-xr-x root/root 26080 2018-06-11 06:38 ./usr/bin/repeat-match
-rwxr-xr-x root/root 981 2018-06-11 06:38 ./usr/bin/run-mummer1
-rwxr-xr-x root/root 1115 2018-06-11 06:38 ./usr/bin/run-mummer3
-rwxr-xr-x root/root 83420 2018-06-11 06:38 ./usr/bin/show-aligns
-rwxr-xr-x root/root 75220 2018-06-11 06:38 ./usr/bin/show-coords
-rwxr-xr-x root/root 62928 2018-06-11 06:38 ./usr/bin/show-diff
-rwxr-xr-x root/root 91604 2018-06-11 06:38 ./usr/bin/show-snps
-rwxr-xr-x root/root 91608 2018-06-11 06:38 ./usr/bin/show-tiling
drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/lib/
drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/lib/mummer/
-rwxr-xr-x root/root 62936 2018-06-11 06:38 ./usr/lib/mummer/postnuc
-rwxr-xr-x root/root 71128 2018-06-11 06:38 ./usr/lib/mummer/postpro
-rwxr-xr-x root/root 13776 2018-06-11 06:38 ./usr/lib/mummer/prenuc
-rwxr-xr-x root/root 21968 2018-06-11 06:38 ./usr/lib/mummer/prepro
-rw-r--r-- root/root 760 2011-12-17 02:49 ./usr/lib/mummer/tandem-repeat.awk
drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/share/
drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/share/doc/
drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/share/doc/mummer/
-rw-r--r-- root/root 327 2011-12-17 02:49 ./usr/share/doc/mummer/ACKNOWLEDGEMENTS
-rw-r--r-- root/root 343 2018-06-11 06:38 ./usr/share/doc/mummer/NEWS.Debian.gz
-rw-r--r-- root/root 207 2018-06-11 06:38 ./usr/share/doc/mummer/README.Debian
-rw-r--r-- root/root 11466 2011-12-17 02:49 ./usr/share/doc/mummer/README.gz
-rw-r--r-- root/root 3033 2018-06-11 06:38 ./usr/share/doc/mummer/changelog.Debian.gz
-rw-r--r-- root/root 1456 2011-12-17 02:49 ./usr/share/doc/mummer/changelog.gz
-rw-r--r-- root/root 1224 2018-06-11 06:38 ./usr/share/doc/mummer/copyright
drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/share/doc/mummer/examples/
drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/share/doc/mummer/examples/expected/
-rw-r--r-- root/root 1567 2018-06-11 06:38 ./usr/share/doc/mummer/examples/expected/mapview_0.fig.gz
-rw-r--r-- root/root 32349 2018-06-11 06:38 ./usr/share/doc/mummer/examples/expected/mummer.mums.gz
-rw-r--r-- root/root 42476 2018-06-11 06:38 ./usr/share/doc/mummer/examples/expected/mummer3.align.gz
-rw-r--r-- root/root 10498 2018-06-11 06:38 ./usr/share/doc/mummer/examples/expected/mummer3.errorsgaps.gz
-rw-r--r-- root/root 9795 2018-06-11 06:38 ./usr/share/doc/mummer/examples/expected/mummer3.gaps.gz
-rw-r--r-- root/root 7663 2018-06-11 06:38 ./usr/share/doc/mummer/examples/expected/mummer3.out.gz
-rw-r--r-- root/root 1272 2018-06-11 06:38 ./usr/share/doc/mummer/examples/expected/nucmer.coords.gz
-rw-r--r-- root/root 2707 2018-06-11 06:38 ./usr/share/doc/mummer/examples/expected/nucmer.delta
-rw-r--r-- root/root 1338 2018-06-11 06:38 ./usr/share/doc/mummer/examples/expected/nucmer.snps.gz
-rw-r--r-- root/root 1234 2018-06-11 06:38 ./usr/share/doc/mummer/examples/expected/nucmer.tiling
-rw-r--r-- root/root 2484 2018-06-11 06:38 ./usr/share/doc/mummer/examples/expected/promer.aligns
-rw-r--r-- root/root 1863 2018-06-11 06:38 ./usr/share/doc/mummer/examples/expected/promer.coords.gz
-rw-r--r-- root/root 1543 2018-06-11 06:38 ./usr/share/doc/mummer/examples/expected/promer.delta.gz
drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/share/doc/mummer/examples/input/
-rw-r--r-- root/root 93602 2018-06-11 06:38 ./usr/share/doc/mummer/examples/input/B_anthracis_Mslice.fasta.gz
-rw-r--r-- root/root 92866 2018-06-11 06:38 ./usr/share/doc/mummer/examples/input/B_anthracis_contigs.fasta.gz
-rw-r--r-- root/root 1611 2018-06-11 06:38 ./usr/share/doc/mummer/examples/input/D_melanogaster_2Rslice.cds
-rw-r--r-- root/root 11550 2018-06-11 06:38 ./usr/share/doc/mummer/examples/input/D_melanogaster_2Rslice.fasta.gz
-rw-r--r-- root/root 1610 2018-06-11 06:38 ./usr/share/doc/mummer/examples/input/D_melanogaster_2Rslice.utr
-rw-r--r-- root/root 13303 2018-06-11 06:38 ./usr/share/doc/mummer/examples/input/D_pseudoobscura_contigs.fasta.gz
-rw-r--r-- root/root 21101 2018-06-11 06:38 ./usr/share/doc/mummer/examples/input/H_pylori26695_Bslice.fasta.gz
-rw-r--r-- root/root 80705 2018-06-11 06:38 ./usr/share/doc/mummer/examples/input/H_pylori26695_Eslice.fasta.gz
-rw-r--r-- root/root 21099 2018-06-11 06:38 ./usr/share/doc/mummer/examples/input/H_pyloriJ99_Bslice.fasta.gz
-rw-r--r-- root/root 77762 2018-06-11 06:38 ./usr/share/doc/mummer/examples/input/H_pyloriJ99_Eslice.fasta.gz
drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/share/man/
drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/share/man/man1/
lrwxrwxrwx root/root 0 2018-06-11 06:38 ./usr/share/man/man1/combineMUMs.1.gz -> mummer.1.gz
-rw-r--r-- root/root 1241 2018-06-11 06:38 ./usr/share/man/man1/delta-filter.1.gz
-rw-r--r-- root/root 720 2018-06-11 06:38 ./usr/share/man/man1/delta2blocks.1.gz
lrwxrwxrwx root/root 0 2018-06-11 06:38 ./usr/share/man/man1/delta2maf.1.gz -> delta2blocks.1.gz
lrwxrwxrwx root/root 0 2018-06-11 06:38 ./usr/share/man/man1/dnadiff.1.gz -> mummer.1.gz
lrwxrwxrwx root/root 0 2018-06-11 06:38 ./usr/share/man/man1/exact-tandems.1.gz -> mummer.1.gz
lrwxrwxrwx root/root 0 2018-06-11 06:38 ./usr/share/man/man1/gaps.1.gz -> mummer.1.gz
lrwxrwxrwx root/root 0 2018-06-11 06:38 ./usr/share/man/man1/mapview.1.gz -> mummer.1.gz
lrwxrwxrwx root/root 0 2018-06-11 06:38 ./usr/share/man/man1/mgaps.1.gz -> mummer.1.gz
lrwxrwxrwx root/root 0 2018-06-11 06:38 ./usr/share/man/man1/mummer-annotate.1.gz -> mummer.1.gz
-rw-r--r-- root/root 5669 2018-06-11 06:38 ./usr/share/man/man1/mummer.1.gz
lrwxrwxrwx root/root 0 2018-06-11 06:38 ./usr/share/man/man1/mummerplot.1.gz -> mummer.1.gz
lrwxrwxrwx root/root 0 2018-06-11 06:38 ./usr/share/man/man1/nucmer.1.gz -> mummer.1.gz
lrwxrwxrwx root/root 0 2018-06-11 06:38 ./usr/share/man/man1/nucmer2xfig.1.gz -> mummer.1.gz
lrwxrwxrwx root/root 0 2018-06-11 06:38 ./usr/share/man/man1/promer.1.gz -> mummer.1.gz
lrwxrwxrwx root/root 0 2018-06-11 06:38 ./usr/share/man/man1/repeat-match.1.gz -> mummer.1.gz
lrwxrwxrwx root/root 0 2018-06-11 06:38 ./usr/share/man/man1/run-mummer1.1.gz -> mummer.1.gz
lrwxrwxrwx root/root 0 2018-06-11 06:38 ./usr/share/man/man1/run-mummer3.1.gz -> mummer.1.gz
lrwxrwxrwx root/root 0 2018-06-11 06:38 ./usr/share/man/man1/show-aligns.1.gz -> mummer.1.gz
lrwxrwxrwx root/root 0 2018-06-11 06:38 ./usr/share/man/man1/show-coords.1.gz -> mummer.1.gz
-rw-r--r-- root/root 910 2018-06-11 06:38 ./usr/share/man/man1/show-diff.1.gz
lrwxrwxrwx root/root 0 2018-06-11 06:38 ./usr/share/man/man1/show-snps.1.gz -> mummer.1.gz
lrwxrwxrwx root/root 0 2018-06-11 06:38 ./usr/share/man/man1/show-tiling.1.gz -> mummer.1.gz
drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/share/perl5/
-rw-r--r-- root/root 54266 2011-12-17 02:49 ./usr/share/perl5/Foundation.pm
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: amd64
Build Profiles: cross nocheck
Build Type: any
Build-Space: 35388
Build-Time: 58
Distribution: unstable
Foreign Architectures: armel
Host Architecture: armel
Install-Time: 47
Job: mummer_3.23+dfsg-4
Lintian: pass
Machine Architecture: amd64
Package: mummer
Package-Time: 115
Source-Version: 3.23+dfsg-4
Space: 35388
Status: successful
Version: 3.23+dfsg-4
--------------------------------------------------------------------------------
Finished at 2019-05-16T08:59:08Z
Build needed 00:01:55, 35388k disk space