sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on gcc131.bak.milne.osuosl.org +==============================================================================+ | mummer 3.23+dfsg-4 (mipsel) Fri, 29 Mar 2019 19:35:24 +0000 | +==============================================================================+ Package: mummer Version: 3.23+dfsg-4 Source Version: 3.23+dfsg-4 Distribution: unstable Machine Architecture: amd64 Host Architecture: mipsel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-3c287097-1882-4ddc-a4d4-a593489d42de' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [242 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-03-29-1410.43.pdiff [3883 B] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-03-29-1410.43.pdiff [3883 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-03-29-0851.22.pdiff [622 B] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-03-29-1410.43.pdiff [3770 B] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-03-29-1410.43.pdiff [3770 B] Get:7 http://debian.oregonstate.edu/debian unstable/main mipsel Packages [8015 kB] Fetched 8322 kB in 2s (4528 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'mummer' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/mummer.git Please use: git clone https://salsa.debian.org/med-team/mummer.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1528 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main mummer 3.23+dfsg-4 (dsc) [2167 B] Get:2 http://debian.oregonstate.edu/debian unstable/main mummer 3.23+dfsg-4 (tar) [1113 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main mummer 3.23+dfsg-4 (diff) [413 kB] Fetched 1528 kB in 0s (35.6 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/mummer-ifHz8e/mummer-3.23+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/mummer-ifHz8e' with '<>' +------------------------------------------------------------------------------+ | Install crossbuild-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-mipsel:amd64 Filtered Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-mipsel:amd64 dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-BBk4Tb/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-BBk4Tb/apt_archive ./ InRelease Get:2 copy:/<>/resolver-BBk4Tb/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-BBk4Tb/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-BBk4Tb/apt_archive ./ Sources [363 B] Get:5 copy:/<>/resolver-BBk4Tb/apt_archive ./ Packages [452 B] Fetched 1772 B in 0s (103 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils-mipsel-linux-gnu cpp-8-mipsel-linux-gnu cpp-mipsel-linux-gnu cross-config crossbuild-essential-mipsel dpkg-cross file g++-8-mipsel-linux-gnu g++-mipsel-linux-gnu gcc-8-cross-base gcc-8-mipsel-linux-gnu gcc-8-mipsel-linux-gnu-base gcc-mipsel-linux-gnu libatomic1-mipsel-cross libc6-dev-mipsel-cross libc6-mipsel-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-mipsel-cross libgcc1-mipsel-cross libgomp1-mipsel-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-mipsel-cross libstdc++6-mipsel-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-mipsel-cross sensible-utils ucf Suggested packages: binutils-doc gcc-8-locales cpp-doc binutils-multiarch g++-8-multilib-mipsel-linux-gnu gcc-8-doc libstdc++6-8-dbg-mipsel-cross gcc-8-multilib-mipsel-linux-gnu libgcc1-dbg-mipsel-cross libgomp1-dbg-mipsel-cross libitm1-dbg-mipsel-cross libatomic1-dbg-mipsel-cross libasan5-dbg-mipsel-cross liblsan0-dbg-mipsel-cross libtsan0-dbg-mipsel-cross libubsan1-dbg-mipsel-cross libmpx2-dbg-mipsel-cross libquadmath0-dbg-mipsel-cross manpages-dev autoconf automake libtool flex bison gdb-mipsel-linux-gnu gcc-doc libyaml-shell-perl Recommended packages: libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl The following NEW packages will be installed: binutils-mipsel-linux-gnu cpp-8-mipsel-linux-gnu cpp-mipsel-linux-gnu cross-config crossbuild-essential-mipsel dpkg-cross file g++-8-mipsel-linux-gnu g++-mipsel-linux-gnu gcc-8-cross-base gcc-8-mipsel-linux-gnu gcc-8-mipsel-linux-gnu-base gcc-mipsel-linux-gnu libatomic1-mipsel-cross libc6-dev-mipsel-cross libc6-mipsel-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-mipsel-cross libgcc1-mipsel-cross libgomp1-mipsel-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-mipsel-cross libstdc++6-mipsel-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-mipsel-cross sbuild-build-depends-core-dummy:mipsel sensible-utils ucf 0 upgraded, 42 newly installed, 0 to remove and 0 not upgraded. Need to get 40.0 MB of archives. After this operation, 146 MB of additional disk space will be used. Get:1 copy:/<>/resolver-BBk4Tb/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [872 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.35-4 [242 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.35-4 [117 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.35-4 [66.3 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mipsel-linux-gnu amd64 2.31.1-16 [2487 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-mipsel-linux-gnu-base amd64 8.3.0-4cross1 [191 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-8-mipsel-linux-gnu amd64 8.3.0-4cross1 [6283 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mipsel-linux-gnu amd64 4:8.3.0-1 [16.5 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-2 [39.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-cross-base all 8.3.0-4cross1 [186 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mipsel-cross all 2.28-7cross1 [1229 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-mipsel-cross all 1:8.3.0-4cross1 [46.1 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mipsel-cross all 8.3.0-4cross1 [69.5 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mipsel-cross all 8.3.0-4cross1 [6688 B] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-8-dev-mipsel-cross all 8.3.0-4cross1 [211 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-mipsel-linux-gnu amd64 8.3.0-4cross1 [6696 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mipsel-linux-gnu amd64 4:8.3.0-1 [1452 B] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mipsel-cross all 8.3.0-4cross1 [312 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mipsel-cross all 4.19.20-1cross1 [1223 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mipsel-cross all 2.28-7cross1 [2317 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-8-dev-mipsel-cross all 8.3.0-4cross1 [1536 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 g++-8-mipsel-linux-gnu amd64 8.3.0-4cross1 [6857 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mipsel-linux-gnu amd64 4:8.3.0-1 [1172 B] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.1-6 [8292 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.00+dfsg-1 [58.6 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1 [344 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.27-1 [66.8 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-2 [38.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-2 [49.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mipsel all 12.6 [6564 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 40.0 MB in 1s (62.9 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11936 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-3+b4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-3+b4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.35-4_amd64.deb ... Unpacking libmagic-mgc (1:5.35-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.35-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-4) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.35-4_amd64.deb ... Unpacking file (1:5.35-4) ... Selecting previously unselected package ucf. Preparing to unpack .../05-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... 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Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../32-libxml-libxml-perl_2.0134+dfsg-1_amd64.deb ... Unpacking libxml-libxml-perl (2.0134+dfsg-1) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../33-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../34-libyaml-perl_1.27-1_all.deb ... Unpacking libyaml-perl (1.27-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../35-libconfig-auto-perl_0.44-1_all.deb ... Unpacking libconfig-auto-perl (0.44-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../36-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../37-libfile-homedir-perl_1.004-1_all.deb ... Unpacking libfile-homedir-perl (1.004-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../38-libdebian-dpkgcross-perl_2.6.15-2_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-2) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../39-dpkg-cross_2.6.15-2_all.deb ... Unpacking dpkg-cross (2.6.15-2) ... Selecting previously unselected package crossbuild-essential-mipsel. Preparing to unpack .../40-crossbuild-essential-mipsel_12.6_all.deb ... Unpacking crossbuild-essential-mipsel (12.6) ... Selecting previously unselected package sbuild-build-depends-core-dummy:mipsel. Preparing to unpack .../41-sbuild-build-depends-core-dummy_0.invalid.0_mipsel.deb ... Unpacking sbuild-build-depends-core-dummy:mipsel (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libfile-which-perl (1.23-1) ... Setting up libmagic-mgc (1:5.35-4) ... Setting up gcc-8-cross-base (8.3.0-4cross1) ... Setting up libmagic1:amd64 (1:5.35-4) ... Setting up libc6-mipsel-cross (2.28-7cross1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up libatomic1-mipsel-cross (8.3.0-4cross1) ... Setting up file (1:5.35-4) ... Setting up libyaml-perl (1.27-1) ... Setting up libicu63:amd64 (63.1-6) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cross-config (2.6.15-2) ... Setting up libgcc1-mipsel-cross (1:8.3.0-4cross1) ... Setting up binutils-mipsel-linux-gnu (2.31.1-16) ... Setting up libgomp1-mipsel-cross (8.3.0-4cross1) ... Setting up gcc-8-mipsel-linux-gnu-base:amd64 (8.3.0-4cross1) ... Setting up linux-libc-dev-mipsel-cross (4.19.20-1cross1) ... Setting up sensible-utils (0.0.12) ... Setting up cpp-8-mipsel-linux-gnu (8.3.0-4cross1) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up libgcc-8-dev-mipsel-cross (8.3.0-4cross1) ... Setting up libc6-dev-mipsel-cross (2.28-7cross1) ... Setting up libstdc++6-mipsel-cross (8.3.0-4cross1) ... Setting up cpp-mipsel-linux-gnu (4:8.3.0-1) ... Setting up ucf (3.0038+nmu1) ... Setting up libstdc++-8-dev-mipsel-cross (8.3.0-4cross1) ... Setting up gcc-8-mipsel-linux-gnu (8.3.0-4cross1) ... Setting up libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-mipsel-linux-gnu (4:8.3.0-1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-8-mipsel-linux-gnu (8.3.0-4cross1) ... Setting up g++-mipsel-linux-gnu (4:8.3.0-1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-2) ... Setting up dpkg-cross (2.6.15-2) ... Setting up crossbuild-essential-mipsel (12.6) ... Setting up sbuild-build-depends-core-dummy:mipsel (0.invalid.0) ... Processing triggers for libc-bin (2.28-8) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mipsel included in any all) Setup apt archive ----------------- dpkg-deb: building package 'sbuild-build-depends-essential-dummy' in '/<>/resolver-BBk4Tb/apt_archive/sbuild-build-depends-essential-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-BBk4Tb/apt_archive ./ InRelease Get:2 copy:/<>/resolver-BBk4Tb/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-BBk4Tb/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-BBk4Tb/apt_archive ./ Sources [482 B] Get:5 copy:/<>/resolver-BBk4Tb/apt_archive ./ Packages [571 B] Fetched 2016 B in 0s (0 B/s) Reading package lists... Reading package lists... Install essential build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-essential-dummy:mipsel 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 840 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-BBk4Tb/apt_archive ./ sbuild-build-depends-essential-dummy 0.invalid.0 [840 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 840 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-essential-dummy:mipsel. (Reading database ... 15107 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-essential-dummy_0.invalid.0_mipsel.deb ... Unpacking sbuild-build-depends-essential-dummy:mipsel (0.invalid.0) ... Setting up sbuild-build-depends-essential-dummy:mipsel (0.invalid.0) ... +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), texlive-latex-base, texlive-latex-recommended, texlive-fonts-recommended Filtered Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), texlive-latex-base, texlive-latex-recommended, texlive-fonts-recommended dpkg-deb: building package 'sbuild-build-depends-mummer-dummy' in '/<>/resolver-BBk4Tb/apt_archive/sbuild-build-depends-mummer-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-mummer-dummy dpkg-scanpackages: info: Wrote 3 entries to output Packages file. Ign:1 copy:/<>/resolver-BBk4Tb/apt_archive ./ InRelease Get:2 copy:/<>/resolver-BBk4Tb/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-BBk4Tb/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-BBk4Tb/apt_archive ./ Sources [660 B] Get:5 copy:/<>/resolver-BBk4Tb/apt_archive ./ Packages [749 B] Fetched 2372 B in 0s (0 B/s) Reading package lists... Reading package lists... Install mummer build dependencies (apt-based resolver) ------------------------------------------------------ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz fontconfig-config fonts-dejavu-core fonts-lmodern gcc-8-base:mipsel gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mipsel libavahi-client3 libavahi-common-data libavahi-common3 libbrotli1 libbsd0 libc6:mipsel libc6-dev:mipsel libcairo2 libcroco3 libcups2 libcupsimage2 libdbus-1-3 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgcc-8-dev:mipsel libgcc1:mipsel libglib2.0-0 libgomp1:mipsel libgraphite2-3 libgs9 libgs9-common libgssapi-krb5-2 libharfbuzz-icu0 libharfbuzz0b libice6 libidn11 libijs-0.35 libjbig0 libjbig2dec0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5support0 liblcms2-2 libncurses6 libopenjp2-7 libpaper-utils libpaper1 libpipeline1 libpixman-1-0 libpng16-16 libpotrace0 libptexenc1 libsigsegv2 libsm6 libssl1.1 libstdc++-8-dev:mipsel libstdc++6:mipsel libsynctex2 libteckit0 libtexlua52 libtexlua53 libtexluajit2 libtiff5 libtool libuchardet0 libwebp6 libwoff1 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxmu6 libxpm4 libxrender1 libxt6 libxxhash0 libzzip-0-13 linux-libc-dev:mipsel lsb-base m4 man-db po-debconf poppler-data t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-recommended x11-common xdg-utils Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:mipsel libc-l10n:mipsel locales:mipsel manpages-dev:mipsel cups-common krb5-doc krb5-user liblcms2-utils libstdc++-8-doc:mipsel libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl poppler-utils ghostscript fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum gv | postscript-viewer perl-tk xpdf-reader | pdf-viewer texlive-fonts-recommended-doc texlive-latex-base-doc texlive-latex-recommended-doc texlive-pstricks Recommended packages: curl | wget | lynx libidn2-0:mipsel libcupsfilters1 dbus libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs fonts-droid-fallback krb5-locales libgpm2 libltdl-dev libmail-sendmail-perl lmodern tex-gyre tipa libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz fontconfig-config fonts-dejavu-core fonts-lmodern gcc-8-base:mipsel gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mipsel libavahi-client3 libavahi-common-data libavahi-common3 libbrotli1 libbsd0 libc6:mipsel libc6-dev:mipsel libcairo2 libcroco3 libcups2 libcupsimage2 libdbus-1-3 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgcc-8-dev:mipsel libgcc1:mipsel libglib2.0-0 libgomp1:mipsel libgraphite2-3 libgs9 libgs9-common libgssapi-krb5-2 libharfbuzz-icu0 libharfbuzz0b libice6 libidn11 libijs-0.35 libjbig0 libjbig2dec0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5support0 liblcms2-2 libncurses6 libopenjp2-7 libpaper-utils libpaper1 libpipeline1 libpixman-1-0 libpng16-16 libpotrace0 libptexenc1 libsigsegv2 libsm6 libssl1.1 libstdc++-8-dev:mipsel libstdc++6:mipsel libsynctex2 libteckit0 libtexlua52 libtexlua53 libtexluajit2 libtiff5 libtool libuchardet0 libwebp6 libwoff1 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxmu6 libxpm4 libxrender1 libxt6 libxxhash0 libzzip-0-13 linux-libc-dev:mipsel lsb-base m4 man-db po-debconf poppler-data sbuild-build-depends-mummer-dummy:mipsel t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-recommended x11-common xdg-utils 0 upgraded, 114 newly installed, 0 to remove and 0 not upgraded. Need to get 98.2 MB of archives. After this operation, 334 MB of additional disk space will be used. Get:1 copy:/<>/resolver-BBk4Tb/apt_archive ./ sbuild-build-depends-mummer-dummy 0.invalid.0 [904 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.9.1-2 [99.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 poppler-data all 0.4.9-2 [1473 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 tex-common all 6.11 [53.1 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-10 [547 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1 [160 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.12-3 [78.0 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.58.3-1 [1258 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20181013-2 [102 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.1.1 [1016 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 fonts-dejavu-core all 2.37-1 [1068 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 fontconfig-config all 2.13.1-2 [280 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 fonts-lmodern all 2.004.5-6 [4539 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main mipsel gcc-8-base mipsel 8.3.0-4 [190 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main mipsel libgcc1 mipsel 1:8.3.0-4 [45.9 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main mipsel libc6 mipsel 2.28-8 [2424 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main mipsel libatomic1 mipsel 8.3.0-4 [6708 B] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libavahi-common-data amd64 0.7-4+b1 [122 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libavahi-common3 amd64 0.7-4+b1 [54.6 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libdbus-1-3 amd64 1.12.12-1 [212 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libavahi-client3 amd64 0.7-4+b1 [58.1 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libbrotli1 amd64 1.0.7-2 [270 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main mipsel linux-libc-dev mipsel 4.19.28-2 [1152 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main mipsel libc6-dev mipsel 2.28-8 [2322 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.2.6-1 [105 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libpng16-16 amd64 1.6.36-5 [292 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libfreetype6 amd64 2.9.1-3 [379 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libfontconfig1 amd64 2.13.1-2 [346 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libpixman-1-0 amd64 0.36.0-1 [537 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libxau6 amd64 1:1.0.8-1+b2 [19.9 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libxcb1 amd64 1.13.1-2 [137 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libx11-data all 2:1.6.7-1 [298 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libx11-6 amd64 2:1.6.7-1 [754 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libxcb-render0 amd64 1.13.1-2 [109 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libxcb-shm0 amd64 1.13.1-2 [99.2 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libxext6 amd64 2:1.3.3-1+b2 [52.5 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libcairo2 amd64 1.16.0-4 [689 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libkeyutils1 amd64 1.6-6 [15.0 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5support0 amd64 1.17-2 [65.6 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libk5crypto3 amd64 1.17-2 [121 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1b-1 [1531 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5-3 amd64 1.17-2 [368 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.17-2 [158 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libcups2 amd64 2.2.10-5 [324 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libcupsimage2 amd64 2.2.10-5 [132 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main mipsel libgomp1 mipsel 8.3.0-4 [70.9 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main mipsel libgcc-8-dev mipsel 8.3.0-4 [210 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libgraphite2-3 amd64 1.3.13-7 [80.7 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libgs9-common all 9.26a~dfsg-2 [5136 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libidn11 amd64 1.33-2.2 [116 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libijs-0.35 amd64 0.35-13 [18.5 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libjbig2dec0 amd64 0.15-2 [61.7 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libjpeg62-turbo amd64 1:1.5.2-2+b1 [134 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 liblcms2-2 amd64 2.9-3 [145 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libopenjp2-7 amd64 2.3.0-2 [158 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libpaper1 amd64 1.1.26 [20.8 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libwebp6 amd64 0.6.1-2 [263 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libtiff5 amd64 4.0.10-4 [257 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libgs9 amd64 9.26a~dfsg-2 [2198 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libharfbuzz0b amd64 2.3.1-1 [1187 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libharfbuzz-icu0 amd64 2.3.1-1 [834 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 lsb-base all 10.2019031300 [28.3 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 x11-common all 1:7.7+19 [251 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libice6 amd64 2:1.0.9-2 [58.7 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libkpathsea6 amd64 2018.20181218.49446-2 [167 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libpaper-utils amd64 1.1.26 [17.9 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libpotrace0 amd64 1.15-1 [26.3 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libptexenc1 amd64 2018.20181218.49446-2 [61.2 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main mipsel libstdc++6 mipsel 8.3.0-4 [349 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main mipsel libstdc++-8-dev mipsel 8.3.0-4 [1552 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 libsynctex2 amd64 2018.20181218.49446-2 [80.7 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 libteckit0 amd64 2.5.8+ds2-5 [318 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 libtexlua52 amd64 2018.20181218.49446-2 [113 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 libtexlua53 amd64 2018.20181218.49446-2 [126 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 libtexluajit2 amd64 2018.20181218.49446-2 [256 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 libwoff1 amd64 1.0.2-1 [43.2 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 libxt6 amd64 1:1.1.5-1+b3 [190 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main amd64 libxmu6 amd64 2:1.1.2-2+b3 [60.8 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main amd64 libxpm4 amd64 1:3.5.12-1 [49.1 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main amd64 libxaw7 amd64 2:1.0.13-1+b2 [201 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main amd64 libxi6 amd64 2:1.7.9-1 [82.6 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main amd64 libxxhash0 amd64 0.6.5-3 [7188 B] Get:107 http://debian.oregonstate.edu/debian unstable/main amd64 libzzip-0-13 amd64 0.13.62-3.2 [55.4 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main amd64 texlive-binaries amd64 2018.20181218.49446-2 [11.4 MB] Get:110 http://debian.oregonstate.edu/debian unstable/main amd64 xdg-utils all 1.1.3-1 [73.3 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main amd64 texlive-base all 2018.20190227-2 [19.7 MB] Get:112 http://debian.oregonstate.edu/debian unstable/main amd64 texlive-fonts-recommended all 2018.20190227-2 [5228 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main amd64 texlive-latex-base all 2018.20190227-2 [984 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main amd64 texlive-latex-recommended all 2018.20190227-2 [15.2 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 98.2 MB in 1s (68.4 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 15107 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.9.1-2_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../001-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../002-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../003-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../004-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../005-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package poppler-data. 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Preparing to unpack .../113-sbuild-build-depends-mummer-dummy_0.invalid.0_mipsel.deb ... Unpacking sbuild-build-depends-mummer-dummy:mipsel (0.invalid.0) ... Setting up libgs9-common (9.26a~dfsg-2) ... Setting up libexpat1:amd64 (2.2.6-1) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up libgraphite2-3:amd64 (1.3.13-7) ... Setting up liblcms2-2:amd64 (2.9-3) ... Setting up libpixman-1-0:amd64 (0.36.0-1) ... Setting up libpaper1:amd64 (1.1.26) ... Creating config file /etc/papersize with new version Setting up lsb-base (10.2019031300) ... Setting up libxau6:amd64 (1:1.0.8-1+b2) ... Setting up libkeyutils1:amd64 (1.6-6) ... Setting up libtexlua52:amd64 (2018.20181218.49446-2) ... Setting up libtexlua53:amd64 (2018.20181218.49446-2) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:amd64 (2.58.3-1) ... No schema files found: doing nothing. Setting up libssl1.1:amd64 (1.1.1b-1) ... Setting up libijs-0.35:amd64 (0.35-13) ... Setting up libtexluajit2:amd64 (2018.20181218.49446-2) ... Setting up libbrotli1:amd64 (1.0.7-2) ... Setting up x11-common (1:7.7+19) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Setting up linux-libc-dev:mipsel (4.19.28-2) ... Setting up gettext-base (0.19.8.1-9) ... Setting up libzzip-0-13:amd64 (0.13.62-3.2) ... Setting up libpaper-utils (1.1.26) ... Setting up libjbig0:amd64 (2.1-3.1+b2) ... Setting up poppler-data (0.4.9-2) ... Setting up libkrb5support0:amd64 (1.17-2) ... Setting up tex-common (6.11) ... update-language: texlive-base not installed and configured, doing nothing! Setting up autotools-dev (20180224.1) ... Setting up libjpeg62-turbo:amd64 (1:1.5.2-2+b1) ... Setting up libx11-data (2:1.6.7-1) ... Setting up libjbig2dec0:amd64 (0.15-2) ... Setting up libidn11:amd64 (1.33-2.2) ... Setting up libteckit0:amd64 (2.5.8+ds2-5) ... Setting up libavahi-common-data:amd64 (0.7-4+b1) ... Setting up libncurses6:amd64 (6.1+20181013-2) ... Setting up libdbus-1-3:amd64 (1.12.12-1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up t1utils (1.41-3) ... Setting up libpng16-16:amd64 (1.6.36-5) ... Setting up gcc-8-base:mipsel (8.3.0-4) ... Setting up autopoint (0.19.8.1-9) ... Setting up libwebp6:amd64 (0.6.1-2) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up libk5crypto3:amd64 (1.17-2) ... Setting up libkpathsea6:amd64 (2018.20181218.49446-2) ... Setting up libxxhash0:amd64 (0.6.5-3) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up fonts-lmodern (2.004.5-6) ... Setting up libopenjp2-7:amd64 (2.3.0-2) ... Setting up libkrb5-3:amd64 (1.17-2) ... Setting up libtiff5:amd64 (4.0.10-4) ... Setting up libbsd0:amd64 (0.9.1-2) ... Setting up libelf1:amd64 (0.176-1) ... Setting up xdg-utils (1.1.3-1) ... Setting up libsynctex2:amd64 (2018.20181218.49446-2) ... Setting up libpotrace0:amd64 (1.15-1) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libice6:amd64 (2:1.0.9-2) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libxcb1:amd64 (1.13.1-2) ... Setting up gettext (0.19.8.1-9) ... Setting up libwoff1:amd64 (1.0.2-1) ... Setting up libtool (2.4.6-10) ... Setting up libxcb-render0:amd64 (1.13.1-2) ... Setting up fontconfig-config (2.13.1-2) ... Setting up libavahi-common3:amd64 (0.7-4+b1) ... Setting up m4 (1.4.18-2) ... Setting up libxcb-shm0:amd64 (1.13.1-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libptexenc1:amd64 (2018.20181218.49446-2) ... Setting up libfreetype6:amd64 (2.9.1-3) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:amd64 (1.17-2) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up libx11-6:amd64 (2:1.6.7-1) ... Setting up libharfbuzz0b:amd64 (2.3.1-1) ... Setting up libfontconfig1:amd64 (2.13.1-2) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up libavahi-client3:amd64 (0.7-4+b1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libharfbuzz-icu0:amd64 (2.3.1-1) ... Setting up libxpm4:amd64 (1:3.5.12-1) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up po-debconf (1.0.21) ... Setting up libxext6:amd64 (2:1.3.3-1+b2) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:amd64 (1.16.0-4) ... Setting up libxt6:amd64 (1:1.1.5-1+b3) ... Setting up libcups2:amd64 (2.2.10-5) ... Setting up libxmu6:amd64 (2:1.1.2-2+b3) ... Setting up libxi6:amd64 (2:1.7.9-1) ... Setting up libxaw7:amd64 (2:1.0.13-1+b2) ... Setting up libcupsimage2:amd64 (2.2.10-5) ... Setting up libgs9:amd64 (9.26a~dfsg-2) ... Setting up texlive-binaries (2018.20181218.49446-2) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up texlive-base (2018.20190227-2) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex tl-paper: setting paper size for dvipdfmx to letter: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for dvips to letter: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for pdftex to letter: /var/lib/texmf/tex/generic/config/pdftexconfig.tex tl-paper: setting paper size for xdvi to letter: /var/lib/texmf/xdvi/XDvi-paper Setting up texlive-latex-base (2018.20190227-2) ... Setting up texlive-latex-recommended (2018.20190227-2) ... Setting up texlive-fonts-recommended (2018.20190227-2) ... Setting up dh-autoreconf (19) ... Setting up libc6:mipsel (2.28-8) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up libc6-dev:mipsel (2.28-8) ... Setting up libgcc1:mipsel (1:8.3.0-4) ... Setting up debhelper (12.1.1) ... Setting up libgomp1:mipsel (8.3.0-4) ... Setting up libatomic1:mipsel (8.3.0-4) ... Setting up libgcc-8-dev:mipsel (8.3.0-4) ... Setting up libstdc++6:mipsel (8.3.0-4) ... Setting up libstdc++-8-dev:mipsel (8.3.0-4) ... Setting up sbuild-build-depends-mummer-dummy:mipsel (0.invalid.0) ... Processing triggers for libc-bin (2.28-8) ... Processing triggers for tex-common (6.11) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.31.1-16 dpkg-dev_1.19.6 g++-8_8.3.0-4 gcc-8_8.3.0-4 libc6-dev_2.28-8 libstdc++-8-dev_8.3.0-4 libstdc++-8-dev-mipsel-cross_8.3.0-4cross1 libstdc++6_8.3.0-4 libstdc++6-mipsel-cross_8.3.0-4cross1 linux-libc-dev_4.19.28-2 Package versions: adduser_3.118 apt_1.8.0 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1 base-passwd_3.5.46 bash_5.0-2 binutils_2.31.1-16 binutils-common_2.31.1-16 binutils-mipsel-linux-gnu_2.31.1-16 binutils-x86-64-linux-gnu_2.31.1-16 bsdmainutils_11.1.2+b1 bsdutils_1:2.33.1-0.1 build-essential_12.6 bzip2_1.0.6-9 coreutils_8.30-3 cpp_4:8.3.0-1 cpp-8_8.3.0-4 cpp-8-mipsel-linux-gnu_8.3.0-4cross1 cpp-mipsel-linux-gnu_4:8.3.0-1 cross-config_2.6.15-2 crossbuild-essential-mipsel_12.6 dash_0.5.10.2-5 debconf_1.5.71 debhelper_12.1.1 debian-archive-keyring_2018.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-strip-nondeterminism_1.1.2-1 diffutils_1:3.7-2 dpkg_1.19.6 dpkg-cross_2.6.15-2 dpkg-dev_1.19.6 dwz_0.12-3 e2fsprogs_1.45.0-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-4 findutils_4.6.0+git+20190209-2 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 fonts-lmodern_2.004.5-6 g++_4:8.3.0-1 g++-8_8.3.0-4 g++-8-mipsel-linux-gnu_8.3.0-4cross1 g++-mipsel-linux-gnu_4:8.3.0-1 gcc_4:8.3.0-1 gcc-8_8.3.0-4 gcc-8-base_8.3.0-4 gcc-8-cross-base_8.3.0-4cross1 gcc-8-mipsel-linux-gnu_8.3.0-4cross1 gcc-8-mipsel-linux-gnu-base_8.3.0-4cross1 gcc-mipsel-linux-gnu_4:8.3.0-1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.13-1 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 hostname_3.21 init-system-helpers_1.56+nmu1 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-4 libapt-pkg5.0_1.8.0 libarchive-zip-perl_1.64-1 libasan5_8.3.0-4 libatomic1_8.3.0-4 libatomic1-mipsel-cross_8.3.0-4cross1 libattr1_1:2.4.48-4 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2 libavahi-client3_0.7-4+b1 libavahi-common-data_0.7-4+b1 libavahi-common3_0.7-4+b1 libbinutils_2.31.1-16 libblkid1_2.33.1-0.1 libbrotli1_1.0.7-2 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9 libc-bin_2.28-8 libc-dev-bin_2.28-8 libc6_2.28-8 libc6-dev_2.28-8 libc6-dev-mipsel-cross_2.28-7cross1 libc6-mipsel-cross_2.28-7cross1 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2 libcc1-0_8.3.0-4 libcom-err2_1.45.0-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.12-3 libcups2_2.2.10-5 libcupsimage2_2.2.10-5 libdb5.3_5.3.28+dfsg1-0.6 libdbus-1-3_1.12.12-1 libdebconfclient0_0.249 libdebian-dpkgcross-perl_2.6.15-2 libdpkg-perl_1.19.6 libelf1_0.176-1 libexpat1_2.2.6-1 libext2fs2_1.45.0-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.1.2-1 libfile-which-perl_1.23-1 libfontconfig1_2.13.1-2 libfreetype6_2.9.1-3 libgcc-8-dev_8.3.0-4 libgcc-8-dev-mipsel-cross_8.3.0-4cross1 libgcc1_1:8.3.0-4 libgcc1-mipsel-cross_1:8.3.0-4cross1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-4 libgdbm6_1.18.1-4 libglib2.0-0_2.58.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.7-2 libgomp1_8.3.0-4 libgomp1-mipsel-cross_8.3.0-4cross1 libgpg-error0_1.35-1 libgraphite2-3_1.3.13-7 libgs9_9.26a~dfsg-2 libgs9-common_9.26a~dfsg-2 libgssapi-krb5-2_1.17-2 libharfbuzz-icu0_2.3.1-1 libharfbuzz0b_2.3.1-1 libhogweed4_3.4.1-1 libice6_2:1.0.9-2 libicu63_63.1-6 libidn11_1.33-2.2 libidn2-0_2.0.5-1 libijs-0.35_0.35-13 libio-string-perl_1.08-3 libisl19_0.20-2 libitm1_8.3.0-4 libjbig0_2.1-3.1+b2 libjbig2dec0_0.15-2 libjpeg62-turbo_1:1.5.2-2+b1 libk5crypto3_1.17-2 libkeyutils1_1.6-6 libkpathsea6_2018.20181218.49446-2 libkrb5-3_1.17-2 libkrb5support0_1.17-2 liblcms2-2_2.9-3 liblocale-gettext-perl_1.07-3+b4 liblsan0_8.3.0-4 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-4 libmagic1_1:5.35-4 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-4 libncurses6_6.1+20181013-2 libncursesw6_6.1+20181013-2 libnettle6_3.4.1-1 libopenjp2-7_2.3.0-2 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpaper-utils_1.1.26 libpaper1_1.1.26 libpcre3_2:8.39-12 libperl5.28_5.28.1-5 libpipeline1_1.5.1-2 libpixman-1-0_0.36.0-1 libpng16-16_1.6.36-5 libpotrace0_1.15-1 libptexenc1_2018.20181218.49446-2 libquadmath0_8.3.0-4 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.33.1-0.1 libss2_1.45.0-1 libssl1.1_1.1.1b-1 libstdc++-8-dev_8.3.0-4 libstdc++-8-dev-mipsel-cross_8.3.0-4cross1 libstdc++6_8.3.0-4 libstdc++6-mipsel-cross_8.3.0-4cross1 libsynctex2_2018.20181218.49446-2 libsystemd0_241-2 libtasn1-6_4.13-3 libteckit0_2.5.8+ds2-5 libtexlua52_2018.20181218.49446-2 libtexlua53_2018.20181218.49446-2 libtexluajit2_2018.20181218.49446-2 libtiff5_4.0.10-4 libtinfo6_6.1+20181013-2 libtool_2.4.6-10 libtsan0_8.3.0-4 libubsan1_8.3.0-4 libuchardet0_0.0.6-3 libudev1_241-2 libunistring2_0.9.10-1 libuuid1_2.33.1-0.1 libwebp6_0.6.1-2 libwoff1_1.0.2-1 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1+b2 libxcb-render0_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb1_1.13.1-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxi6_2:1.7.9-1 libxml-libxml-perl_2.0134+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.00+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libxmu6_2:1.1.2-2+b3 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1+b3 libxxhash0_0.6.5-3 libyaml-perl_1.27-1 libzstd1_1.3.8+dfsg-3 libzzip-0-13_0.13.62-3.2 linux-libc-dev_4.19.28-2 linux-libc-dev-mipsel-cross_4.19.20-1cross1 login_1:4.5-1.1 lsb-base_10.2019031300 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17+b3 mount_2.33.1-0.1 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-5 perl-base_5.28.1-5 perl-modules-5.28_5.28.1-5 po-debconf_1.0.21 poppler-data_0.4.9-2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-essential-dummy_0.invalid.0 sbuild-build-depends-mummer-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-8 t1utils_1.41-3 tar_1.30+dfsg-5 tex-common_6.11 texlive-base_2018.20190227-2 texlive-binaries_2018.20181218.49446-2 texlive-fonts-recommended_2018.20190227-2 texlive-latex-base_2018.20190227-2 texlive-latex-recommended_2018.20190227-2 tzdata_2019a-1 ucf_3.0038+nmu1 util-linux_2.33.1-0.1 x11-common_1:7.7+19 xdg-utils_1.1.3-1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Mon Jun 11 07:02:30 2018 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./mummer_3.23+dfsg-4.dsc dpkg-source: info: extracting mummer in /<>/mummer-3.23+dfsg dpkg-source: info: unpacking mummer_3.23+dfsg.orig.tar.xz dpkg-source: info: unpacking mummer_3.23+dfsg-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 10_install_dirs.patch dpkg-source: info: applying 02at_docs_web.diff dpkg-source: info: applying enable_building_with_tetex.patch dpkg-source: info: applying fix_sf_privacy_breach_issue.patch dpkg-source: info: applying hardening.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying addition_from_mugsy.patch dpkg-source: info: applying 0009-improve-performance-of-delta2maf.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mipsel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-3c287097-1882-4ddc-a4d4-a593489d42de SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package mummer dpkg-buildpackage: info: source version 3.23+dfsg-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type mipsel-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mipsel fakeroot debian/rules clean dh clean dh_auto_clean make -j1 clean make[1]: Entering directory '/<>/mummer-3.23+dfsg' csh: not found rm -f *~ core* cd /<>/mummer-3.23+dfsg/src/kurtz; make clean make[2]: Entering directory '/<>/mummer-3.23+dfsg/src/kurtz' rm -f *~ cd libbasedir; make clean make[3]: Entering directory '/<>/mummer-3.23+dfsg/src/kurtz/libbasedir' rm -f *.splint rm -f *.[oa] *.dbg.o *.inc *.aux *.dvi *.log *~ make[3]: Leaving directory '/<>/mummer-3.23+dfsg/src/kurtz/libbasedir' cd streesrc; make clean make[3]: Entering directory '/<>/mummer-3.23+dfsg/src/kurtz/streesrc' rm -f *.splint rm -f *.[aox] *~ make[3]: Leaving directory '/<>/mummer-3.23+dfsg/src/kurtz/streesrc' cd mm3src; make clean make[3]: Entering directory '/<>/mummer-3.23+dfsg/src/kurtz/mm3src' rm -f *.splint rm -f *.[ox] shit[123] *~ cd /<>/mummer-3.23+dfsg; rm -f maxmat3.x maxmat3.dbg.x mummer make[3]: Leaving directory '/<>/mummer-3.23+dfsg/src/kurtz/mm3src' make[2]: Leaving directory '/<>/mummer-3.23+dfsg/src/kurtz' cd /<>/mummer-3.23+dfsg/src/tigr; make clean make[2]: Entering directory '/<>/mummer-3.23+dfsg/src/tigr' rm -f *.o *~ cd /<>/mummer-3.23+dfsg; rm -f annotate combineMUMs delta-filter gaps mgaps postnuc postpro prenuc prepro repeat-match show-aligns show-coords show-tiling show-snps show-diff delta2blocks delta2maf cd /<>/mummer-3.23+dfsg/aux_bin; rm -f annotate combineMUMs delta-filter gaps mgaps postnuc postpro prenuc prepro repeat-match show-aligns show-coords show-tiling show-snps show-diff delta2blocks delta2maf make[2]: Leaving directory '/<>/mummer-3.23+dfsg/src/tigr' cd /<>/mummer-3.23+dfsg/scripts; make clean make[2]: Entering directory '/<>/mummer-3.23+dfsg/scripts' csh: not found rm -f *~ cd /<>/mummer-3.23+dfsg; rm -f exact-tandems mapview mummerplot nucmer promer run-mummer1 run-mummer3 nucmer2xfig dnadiff make[2]: Leaving directory '/<>/mummer-3.23+dfsg/scripts' cd /<>/mummer-3.23+dfsg/docs; make clean make[2]: Entering directory '/<>/mummer-3.23+dfsg/docs' rm -f *.dvi *.aux *.log *.out *~ maxmat3man.pdf make[2]: Leaving directory '/<>/mummer-3.23+dfsg/docs' make[1]: Leaving directory '/<>/mummer-3.23+dfsg' dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>/mummer-3.23+dfsg' [ -d /<>/mummer-3.23+dfsg/debian/tmp/usr/bin ] || mkdir -p /<>/mummer-3.23+dfsg/debian/tmp/usr/bin [ -d /<>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer ] || mkdir -p /<>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer dh_auto_build -- BIN_DIR=/<>/mummer-3.23+dfsg/debian/tmp/usr/bin AUX_BIN_DIR=/<>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer \ FINAL_BIN_DIR=/usr/bin FINAL_AUX_BIN_DIR=/usr/lib/mummer \ FINAL_SCRIPT_DIR=/usr/share/perl5/ \ CFLAGS="-g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc" CXXFLAGS="-g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=mipsel-linux-gnu-pkg-config CXX=mipsel-linux-gnu-g\+\+ CC=mipsel-linux-gnu-gcc BIN_DIR=/<>/mummer-3.23\+dfsg/debian/tmp/usr/bin AUX_BIN_DIR=/<>/mummer-3.23\+dfsg/debian/tmp/usr/lib/mummer FINAL_BIN_DIR=/usr/bin FINAL_AUX_BIN_DIR=/usr/lib/mummer FINAL_SCRIPT_DIR=/usr/share/perl5/ "CFLAGS=-g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc" "CXXFLAGS=-g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security" "LDFLAGS=-Wl,-z,relro -Wl,-z,now" make[2]: Entering directory '/<>/mummer-3.23+dfsg' csh: not found cd /<>/mummer-3.23+dfsg/src/kurtz; make mummer make[3]: Entering directory '/<>/mummer-3.23+dfsg/src/kurtz' cd libbasedir; make libbase.a make[4]: Entering directory '/<>/mummer-3.23+dfsg/src/kurtz/libbasedir' mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cleanMUMcand.o cleanMUMcand.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o clock.o clock.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mapfile.o mapfile.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multiseq.o multiseq.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o procopt.o procopt.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o safescpy.o safescpy.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o seterror.o seterror.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o space.o space.c ar sruv libbase.a cleanMUMcand.o clock.o mapfile.o multiseq.o procopt.o safescpy.o seterror.o space.o ar: `u' modifier ignored since `D' is the default (see `U') ar: creating libbase.a a - cleanMUMcand.o a - clock.o a - mapfile.o a - multiseq.o a - procopt.o a - safescpy.o a - seterror.o a - space.o make[4]: Leaving directory '/<>/mummer-3.23+dfsg/src/kurtz/libbasedir' cd streesrc; make libstree.a make[4]: Entering directory '/<>/mummer-3.23+dfsg/src/kurtz/streesrc' mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o construct.o construct.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o access.o access.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o scanpref.o scanpref.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o linkloc.o linkloc.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o depthtab.o depthtab.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ex2leav.o ex2leav.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dfs.o dfs.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o overmax.o overmax.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o oversucc.o oversucc.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o addleafcount.o addleafcount.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -DSTREEHUGE -Wdate-time -D_FORTIFY_SOURCE=2 -c -o iterator.o iterator.c ar sruv libstree.a construct.o access.o scanpref.o linkloc.o depthtab.o ex2leav.o dfs.o overmax.o oversucc.o addleafcount.o iterator.o ar: `u' modifier ignored since `D' is the default (see `U') ar: creating libstree.a a - construct.o a - access.o a - scanpref.o a - linkloc.o a - depthtab.o a - ex2leav.o a - dfs.o a - overmax.o a - oversucc.o a - addleafcount.o a - iterator.o make[4]: Leaving directory '/<>/mummer-3.23+dfsg/src/kurtz/streesrc' cd mm3src; make mummer make[4]: Entering directory '/<>/mummer-3.23+dfsg/src/kurtz/mm3src' mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -I../streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maxmat3.o maxmat3.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -I../streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maxmatopt.o maxmatopt.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -I../streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maxmatinp.o maxmatinp.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -I../streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o findmumcand.o findmumcand.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -I../streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o findmaxmat.o findmaxmat.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc -I../libbasedir -I../streesrc -Wdate-time -D_FORTIFY_SOURCE=2 -c -o procmaxmat.o procmaxmat.c mipsel-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now maxmat3.o maxmatopt.o maxmatinp.o findmumcand.o findmaxmat.o procmaxmat.o ../streesrc/libstree.a ../libbasedir/libbase.a \ -o /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/mummer; chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/mummer make[4]: Leaving directory '/<>/mummer-3.23+dfsg/src/kurtz/mm3src' make[3]: Leaving directory '/<>/mummer-3.23+dfsg/src/kurtz' cd /<>/mummer-3.23+dfsg/src/tigr; make CFLAGS="-g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSTREEHUGE -I/<>/mummer-3.23+dfsg/src/kurtz/libbasedir -I/<>/mummer-3.23+dfsg/src/kurtz/streesrc" CXXFLAGS="-g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" all make[3]: Entering directory '/<>/mummer-3.23+dfsg/src/tigr' mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security tigrinc.cc -c -o tigrinc.o mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now annotate.cc tigrinc.o -o /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/annotate; chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/annotate mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now combineMUMs.cc tigrinc.o -o /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/combineMUMs; chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/combineMUMs combineMUMs.cc:26:38: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] #define DEFAULT_ERROR_FILE_NAME "witherrors.gaps" ^~~~~~~~~~~~~~~~~ combineMUMs.cc:109:27: note: in expansion of macro 'DEFAULT_ERROR_FILE_NAME' char * Error_File_Name = DEFAULT_ERROR_FILE_NAME; ^~~~~~~~~~~~~~~~~~~~~~~ combineMUMs.cc:135:24: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] char * Query_Suffix = "Query"; ^~~~~~~ combineMUMs.cc:145:22: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] char * Ref_Suffix = "Ref"; ^~~~~ mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security delta.cc -c -o delta.o mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now delta-filter.cc tigrinc.o delta.o -o /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/delta-filter; chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/delta-filter mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now gaps.cc tigrinc.o -o /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/gaps; chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/gaps mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now mgaps.cc tigrinc.o -o /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/mgaps; chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/mgaps mgaps.cc: In function 'int Process_Cluster(Match_t*, int, char*)': mgaps.cc:533:20: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] label = "#\n"; ^~~~~ mgaps.cc: In function 'void Process_Matches(Match_t*, int, char*)': mgaps.cc:620:19: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] label = "#\n"; ^~~~~ mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security sw_align.cc -c -o sw_align.o mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now postnuc.cc tigrinc.o sw_align.o -o /<>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer/postnuc; chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer/postnuc mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security translate.cc -c -o translate.o mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now postpro.cc tigrinc.o sw_align.o translate.o -o /<>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer/postpro; chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer/postpro mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now prenuc.cc tigrinc.o -o /<>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer/prenuc; chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer/prenuc mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now prepro.cc tigrinc.o translate.o -o /<>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer/prepro; chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/lib/mummer/prepro mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now repeat-match.cc tigrinc.o -o /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/repeat-match; chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/repeat-match mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now show-aligns.cc tigrinc.o translate.o delta.o -o /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-aligns; chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-aligns mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now show-coords.cc tigrinc.o delta.o -o /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-coords; chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-coords show-coords.cc: In function 'void printBtab(std::vector)': show-coords.cc:799:12: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] type = "NUCMER"; ^~~~~~~~ show-coords.cc:801:12: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] type = "PROMER"; ^~~~~~~~ show-coords.cc:803:12: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] type = "NULL"; ^~~~~~ mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now show-tiling.cc tigrinc.o delta.o -o /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-tiling; chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-tiling mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now show-snps.cc tigrinc.o translate.o delta.o -o /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-snps; chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-snps mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now show-diff.cc tigrinc.o delta.o -o /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-diff; chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/show-diff mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now delta2blocks.cc tigrinc.o translate.o delta.o -o /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/delta2blocks; chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/delta2blocks delta2blocks.cc: In function 'void printAlignments(std::vector, char*, char*, char*, char*)': delta2blocks.cc:408:15: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] printf ("%s %s %d %d %d %d ",IdR,IdQ, Ap->sR,Ap->eR,Ap->sQ,Ap->eQ); ^~~~~~~~~~~~~~~~~~~~ ~~~~~~ delta2blocks.cc:408:15: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long int' [-Wformat=] delta2blocks.cc:408:15: warning: format '%d' expects argument of type 'int', but argument 6 has type 'long int' [-Wformat=] delta2blocks.cc:408:15: warning: format '%d' expects argument of type 'int', but argument 7 has type 'long int' [-Wformat=] mipsel-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/mummer-3.23+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now delta2maf.cc tigrinc.o translate.o delta.o -o /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/delta2maf; chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/delta2maf delta2maf.cc: In function 'void printAlignments(std::vector, char*, char*, std::map, char*>&)': delta2maf.cc:547:14: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long int' [-Wformat=] printf("a score=%d\n",abs(Ap->eR - Ap->sR)); ^~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~~~~~~ delta2maf.cc:587:13: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] printf("s %s %d %d %s %d ", IdQ, sQ-1, eQ-sQ+1, "-",SeqLenQ); ^~~~~~~~~~~~~~~~~~~ ~~~~ delta2maf.cc:587:13: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] delta2maf.cc:587:13: warning: format '%d' expects argument of type 'int', but argument 6 has type 'long int' [-Wformat=] delta2maf.cc:590:13: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] printf("s %s %d %d %s %d ", IdQ, sQ-1, eQ-sQ+1, "+",SeqLenQ); ^~~~~~~~~~~~~~~~~~~ ~~~~ delta2maf.cc:590:13: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] delta2maf.cc:590:13: warning: format '%d' expects argument of type 'int', but argument 6 has type 'long int' [-Wformat=] delta2maf.cc:597:13: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] printf("s %s %d %d %s %d ", IdR, sR-1, eR-sR+1, "-",SeqLenR); ^~~~~~~~~~~~~~~~~~~ ~~~~ delta2maf.cc:597:13: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] delta2maf.cc:597:13: warning: format '%d' expects argument of type 'int', but argument 6 has type 'long int' [-Wformat=] delta2maf.cc:600:13: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] printf("s %s %d %d %s %d ", IdR, sR-1, eR-sR+1, "+",SeqLenR); ^~~~~~~~~~~~~~~~~~~ ~~~~ delta2maf.cc:600:13: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] delta2maf.cc:600:13: warning: format '%d' expects argument of type 'int', but argument 6 has type 'long int' [-Wformat=] delta2maf.cc:633:11: warning: format '%s' expects argument of type 'char*', but argument 2 has type 'char (*)[(Screen_Width + 1)]' [-Wformat=] printf("%s", &Buff2); ^~~~ ~~~~~~ delta2maf.cc:637:11: warning: format '%s' expects argument of type 'char*', but argument 2 has type 'char (*)[(Screen_Width + 1)]' [-Wformat=] printf("%s", &Buff1); ^~~~ ~~~~~~ delta2maf.cc:659:12: warning: format '%s' expects argument of type 'char*', but argument 2 has type 'char (*)[(Screen_Width + 1)]' [-Wformat=] printf("%s", &Buff2); ^~~~ ~~~~~~ delta2maf.cc:663:12: warning: format '%s' expects argument of type 'char*', but argument 2 has type 'char (*)[(Screen_Width + 1)]' [-Wformat=] printf("%s", &Buff1); ^~~~ ~~~~~~ delta2maf.cc:710:14: warning: format '%s' expects argument of type 'char*', but argument 2 has type 'char (*)[(Screen_Width + 1)]' [-Wformat=] printf("%s", &Buff2); ^~~~ ~~~~~~ delta2maf.cc:714:14: warning: format '%s' expects argument of type 'char*', but argument 2 has type 'char (*)[(Screen_Width + 1)]' [-Wformat=] printf("%s", &Buff1); ^~~~ ~~~~~~ delta2maf.cc:732:15: warning: format '%s' expects argument of type 'char*', but argument 2 has type 'char (*)[(Screen_Width + 1)]' [-Wformat=] printf("%s", &Buff2); ^~~~ ~~~~~~ delta2maf.cc:736:15: warning: format '%s' expects argument of type 'char*', but argument 2 has type 'char (*)[(Screen_Width + 1)]' [-Wformat=] printf("%s", &Buff1); ^~~~ ~~~~~~ make[3]: Leaving directory '/<>/mummer-3.23+dfsg/src/tigr' cd /<>/mummer-3.23+dfsg/scripts; make all make[3]: Entering directory '/<>/mummer-3.23+dfsg/scripts' csh: not found cp -a ../debian/sh-replacement-scripts/exact-tandems /<>/mummer-3.23+dfsg/debian/tmp/usr/bin chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/exact-tandems /bin/sed -e 's?__PERL_PATH?/usr/bin/perl?g' \ -e 's?__SCRIPT_DIR?/usr/share/perl5/?g' \ mapview.pl > /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/mapview chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/mapview /bin/sed -e 's?__PERL_PATH?/usr/bin/perl?g' \ -e 's?__SCRIPT_DIR?/usr/share/perl5/?g' \ -e 's?__BIN_DIR?/usr/bin?g' \ mummerplot.pl > /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/mummerplot chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/mummerplot /bin/sed -e 's?__PERL_PATH?/usr/bin/perl?g' \ -e 's?__SCRIPT_DIR?/usr/share/perl5/?g' \ -e 's?__AUX_BIN_DIR?/usr/lib/mummer?g' \ -e 's?__BIN_DIR?/usr/bin?g' \ nucmer.pl > /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/nucmer chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/nucmer /bin/sed -e 's?__PERL_PATH?/usr/bin/perl?g' \ -e 's?__SCRIPT_DIR?/usr/share/perl5/?g' \ -e 's?__AUX_BIN_DIR?/usr/lib/mummer?g' \ -e 's?__BIN_DIR?/usr/bin?g' \ promer.pl > /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/promer chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/promer cp -a ../debian/sh-replacement-scripts/run-mummer1 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/run-mummer1 cp -a ../debian/sh-replacement-scripts/run-mummer3 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/run-mummer3 /bin/sed -e 's?__PERL_PATH?/usr/bin/perl?g' \ nucmer2xfig.pl > /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/nucmer2xfig chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/nucmer2xfig /bin/sed -e 's?__PERL_PATH?/usr/bin/perl?g' \ -e 's?__SCRIPT_DIR?/usr/share/perl5/?g' \ -e 's?__BIN_DIR?/usr/bin?g' \ dnadiff.pl > /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/dnadiff chmod 755 /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/dnadiff make[3]: Leaving directory '/<>/mummer-3.23+dfsg/scripts' make[2]: Leaving directory '/<>/mummer-3.23+dfsg' /usr/bin/make -C docs make[2]: Entering directory '/<>/mummer-3.23+dfsg/docs' pdflatex maxmat3man This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./maxmat3man.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size12.clo)) (/usr/share/texlive/texmf-dist/tex/latex/ntgclass/a4.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) (./skaff.sty) (./optionman.sty) No file maxmat3man.aux. (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/omsptm.fd) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) LaTeX Warning: Reference `SecBasicNotions' on page 1 undefined on input line 34 . Overfull \hbox (4.79204pt too wide) in paragraph at lines 58--59 \OT1/ptm/m/n/12 Compute \OT1/ptm/m/it/12 MUM\OT1/ptm/m/n/12 -candidates, i.e. m atches that are unique in the reference-sequence [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] LaTeX Warning: Reference `SecBasicNotions' on page 2 undefined on input line 10 2. [2] [3] Overfull \hbox (8.54073pt too wide) in paragraph at lines 223--223 []\OT1/pcr/m/n/10.95 # ........................................................ ......[] [4] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALL2_BOVIN|ALLERGEN 139 1 155 7[] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALG3_YEAST|PUTATIVE 425 2 904 7[] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALF_TRYBB|FRUCTOSE-BISPHOSPHATE 177 4 794 7[] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALGB_YEAST|ALG11 114 12 599 7[] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALR_SYNY3|ALANINE 354 33 261 7[] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALGB_PSEAE|ALGINATE 212 40 991 7[] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALGB_PSEAE|ALGINATE 314 41 093 7[] [5] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALGB_PSEAE|ALGINATE 360 41 138 7[] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALR_SYNY3|ALANINE 79 44 186 7[] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALP_CEPAC|ALKALINE 366 45 304 7[] [6] [7] (./maxmat3man.aux) LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc} Output written on maxmat3man.pdf (7 pages, 133958 bytes). Transcript written on maxmat3man.log. pdflatex maxmat3man This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./maxmat3man.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size12.clo)) (/usr/share/texlive/texmf-dist/tex/latex/ntgclass/a4.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) (./skaff.sty) (./optionman.sty) (./maxmat3man.aux) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/omsptm.fd) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) Overfull \hbox (4.79204pt too wide) in paragraph at lines 58--59 \OT1/ptm/m/n/12 Compute \OT1/ptm/m/it/12 MUM\OT1/ptm/m/n/12 -candidates, i.e. m atches that are unique in the reference-sequence [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [3] Overfull \hbox (8.54073pt too wide) in paragraph at lines 223--223 []\OT1/pcr/m/n/10.95 # ........................................................ ......[] [4] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALL2_BOVIN|ALLERGEN 139 1 155 7[] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALG3_YEAST|PUTATIVE 425 2 904 7[] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALF_TRYBB|FRUCTOSE-BISPHOSPHATE 177 4 794 7[] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALGB_YEAST|ALG11 114 12 599 7[] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALR_SYNY3|ALANINE 354 33 261 7[] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALGB_PSEAE|ALGINATE 212 40 991 7[] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALGB_PSEAE|ALGINATE 314 41 093 7[] [5] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALGB_PSEAE|ALGINATE 360 41 138 7[] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALR_SYNY3|ALANINE 79 44 186 7[] Overfull \hbox (15.11072pt too wide) in paragraph at lines 296--296 [] \OT1/pcr/m/n/10.95 sp|ALP_CEPAC|ALKALINE 366 45 304 7[] [6] [7] (./maxmat3man.aux) ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc} Output written on maxmat3man.pdf (7 pages, 133284 bytes). Transcript written on maxmat3man.log. make[2]: Leaving directory '/<>/mummer-3.23+dfsg/docs' make[1]: Leaving directory '/<>/mummer-3.23+dfsg' debian/rules override_dh_auto_test make[1]: Entering directory '/<>/mummer-3.23+dfsg' /usr/bin/make check make[2]: Entering directory '/<>/mummer-3.23+dfsg' csh: not found ERROR: 'csh' C-shell not found check complete make[2]: Leaving directory '/<>/mummer-3.23+dfsg' make[1]: Leaving directory '/<>/mummer-3.23+dfsg' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a debian/rules override_dh_prep make[1]: Entering directory '/<>/mummer-3.23+dfsg' dh_prep -X debian/tmp make[1]: Leaving directory '/<>/mummer-3.23+dfsg' debian/rules override_dh_auto_install make[1]: Entering directory '/<>/mummer-3.23+dfsg' mv /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/annotate /<>/mummer-3.23+dfsg/debian/tmp/usr/bin/mummer-annotate make[1]: Leaving directory '/<>/mummer-3.23+dfsg' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a debian/rules override_dh_compress make[1]: Entering directory '/<>/mummer-3.23+dfsg' dh_compress -Xpdf make[1]: Leaving directory '/<>/mummer-3.23+dfsg' dh_fixperms -a dh_missing -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'mummer' in '../mummer_3.23+dfsg-4_mipsel.deb'. dpkg-deb: building package 'mummer-dbgsym' in '../mummer-dbgsym_3.23+dfsg-4_mipsel.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../mummer_3.23+dfsg-4_mipsel.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-03-29T19:37:11Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/resolver-BBk4Tb/apt_archive/sbuild-build-depends-lintian-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-lintian-dummy sbuild-build-depends-mummer-dummy dpkg-scanpackages: info: Wrote 4 entries to output Packages file. Ign:1 copy:/<>/resolver-BBk4Tb/apt_archive ./ InRelease Get:2 copy:/<>/resolver-BBk4Tb/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-BBk4Tb/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-BBk4Tb/apt_archive ./ Sources [780 B] Get:5 copy:/<>/resolver-BBk4Tb/apt_archive ./ Packages [862 B] Fetched 2605 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common Suggested packages: libdata-dump-perl ca-certificates libhtml-template-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libunicode-utf8-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:mipsel 0 upgraded, 46 newly installed, 0 to remove and 0 not upgraded. Need to get 6182 kB of archives. After this operation, 16.3 MB of additional disk space will be used. Get:1 copy:/<>/resolver-BBk4Tb/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 5.6 [19.4 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 7.0-5 [70.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.62-1 [33.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.2-1 [49.4 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.13-1 [512 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.27.2-2 [640 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.13-1 [867 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.34+b1 [71.2 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.40-1 [222 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.21-1+b3 [13.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.41-1+b1 [14.6 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 3 [6782 B] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.85-2+b1 [308 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.060-3 [207 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.18-1 [88.5 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.19-1 [372 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.39-1 [74.5 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.72-1 [262 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b5 [33.7 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-1 [101 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b4 [64.2 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libparse-debianchangelog-perl all 1.2.0-13 [59.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.76+repack-1 [33.1 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2 [90.4 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.11.0 [1187 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 6182 kB in 0s (31.4 MB/s) Selecting previously unselected package netbase. (Reading database ... 28745 files and directories currently installed.) Preparing to unpack .../00-netbase_5.6_all.deb ... Unpacking netbase (5.6) ... Selecting previously unselected package readline-common. Preparing to unpack .../01-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.62-1_amd64.deb ... Unpacking diffstat (1.62-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.2-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.2-1) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../04-libreadline7_7.0-5_amd64.deb ... Unpacking libreadline7:amd64 (7.0-5) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.13-1_amd64.deb ... Unpacking gpgconf (2.2.13-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../06-libsqlite3-0_3.27.2-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.27.2-2) ... Selecting previously unselected package gpg. Preparing to unpack .../07-gpg_2.2.13-1_amd64.deb ... Unpacking gpg (2.2.13-1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../08-libapt-pkg-perl_0.1.34+b1_amd64.deb ... Unpacking libapt-pkg-perl (0.1.34+b1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../09-libcapture-tiny-perl_0.48-1_all.deb ... Unpacking libcapture-tiny-perl (0.48-1) ... Selecting previously unselected package libhtml-tagset-perl. Preparing to unpack .../10-libhtml-tagset-perl_3.20-3_all.deb ... Unpacking libhtml-tagset-perl (3.20-3) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../11-liburi-perl_1.76-1_all.deb ... Unpacking liburi-perl (1.76-1) ... Selecting previously unselected package libhtml-parser-perl. Preparing to unpack .../12-libhtml-parser-perl_3.72-3+b3_amd64.deb ... Unpacking libhtml-parser-perl (3.72-3+b3) ... Selecting previously unselected package libcgi-pm-perl. Preparing to unpack .../13-libcgi-pm-perl_4.40-1_all.deb ... Unpacking libcgi-pm-perl (4.40-1) ... Selecting previously unselected package libsub-name-perl. Preparing to unpack .../14-libsub-name-perl_0.21-1+b3_amd64.deb ... Unpacking libsub-name-perl (0.21-1+b3) ... Selecting previously unselected package libclass-accessor-perl. Preparing to unpack .../15-libclass-accessor-perl_0.51-1_all.deb ... Unpacking libclass-accessor-perl (0.51-1) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../16-libclone-perl_0.41-1+b1_amd64.deb ... Unpacking libclone-perl (0.41-1+b1) ... Selecting previously unselected package libdigest-hmac-perl. Preparing to unpack .../17-libdigest-hmac-perl_1.03+dfsg-2_all.deb ... Unpacking libdigest-hmac-perl (1.03+dfsg-2) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../18-libtimedate-perl_2.3000-2_all.deb ... Unpacking libtimedate-perl (2.3000-2) ... Selecting previously unselected package perl-openssl-defaults:amd64. Preparing to unpack .../19-perl-openssl-defaults_3_amd64.deb ... Unpacking perl-openssl-defaults:amd64 (3) ... Selecting previously unselected package libnet-ssleay-perl. Preparing to unpack .../20-libnet-ssleay-perl_1.85-2+b1_amd64.deb ... Unpacking libnet-ssleay-perl (1.85-2+b1) ... Selecting previously unselected package libio-socket-ssl-perl. Preparing to unpack .../21-libio-socket-ssl-perl_2.060-3_all.deb ... Unpacking libio-socket-ssl-perl (2.060-3) ... Selecting previously unselected package libnet-smtp-ssl-perl. Preparing to unpack .../22-libnet-smtp-ssl-perl_1.04-1_all.deb ... Unpacking libnet-smtp-ssl-perl (1.04-1) ... Selecting previously unselected package libmailtools-perl. Preparing to unpack .../23-libmailtools-perl_2.18-1_all.deb ... Unpacking libmailtools-perl (2.18-1) ... Selecting previously unselected package libnet-ip-perl. Preparing to unpack .../24-libnet-ip-perl_1.26-2_all.deb ... Unpacking libnet-ip-perl (1.26-2) ... Selecting previously unselected package libnet-dns-perl. Preparing to unpack .../25-libnet-dns-perl_1.19-1_all.deb ... Unpacking libnet-dns-perl (1.19-1) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../26-libnet-domain-tld-perl_1.75-1_all.deb ... Unpacking libnet-domain-tld-perl (1.75-1) ... Selecting previously unselected package libemail-valid-perl. Preparing to unpack .../27-libemail-valid-perl_1.202-1_all.deb ... Unpacking libemail-valid-perl (1.202-1) ... Selecting previously unselected package libexporter-tiny-perl. Preparing to unpack .../28-libexporter-tiny-perl_1.002001-1_all.deb ... Unpacking libexporter-tiny-perl (1.002001-1) ... Selecting previously unselected package libipc-system-simple-perl. Preparing to unpack .../29-libipc-system-simple-perl_1.25-4_all.deb ... Unpacking libipc-system-simple-perl (1.25-4) ... Selecting previously unselected package libfile-basedir-perl. Preparing to unpack .../30-libfile-basedir-perl_0.08-1_all.deb ... Unpacking libfile-basedir-perl (0.08-1) ... Selecting previously unselected package libfuture-perl. Preparing to unpack .../31-libfuture-perl_0.39-1_all.deb ... Unpacking libfuture-perl (0.39-1) ... Selecting previously unselected package libstruct-dumb-perl. Preparing to unpack .../32-libstruct-dumb-perl_0.09-1_all.deb ... Unpacking libstruct-dumb-perl (0.09-1) ... Selecting previously unselected package libio-async-perl. Preparing to unpack .../33-libio-async-perl_0.72-1_all.deb ... Unpacking libio-async-perl (0.72-1) ... Selecting previously unselected package libio-pty-perl. Preparing to unpack .../34-libio-pty-perl_1%3a1.08-1.1+b5_amd64.deb ... Unpacking libio-pty-perl (1:1.08-1.1+b5) ... Selecting previously unselected package libipc-run-perl. Preparing to unpack .../35-libipc-run-perl_20180523.0-1_all.deb ... Unpacking libipc-run-perl (20180523.0-1) ... Selecting previously unselected package liblist-moreutils-perl. Preparing to unpack .../36-liblist-moreutils-perl_0.416-1+b4_amd64.deb ... Unpacking liblist-moreutils-perl (0.416-1+b4) ... Selecting previously unselected package libparse-debianchangelog-perl. Preparing to unpack .../37-libparse-debianchangelog-perl_1.2.0-13_all.deb ... Unpacking libparse-debianchangelog-perl (1.2.0-13) ... Selecting previously unselected package libpath-tiny-perl. Preparing to unpack .../38-libpath-tiny-perl_0.108-1_all.deb ... Unpacking libpath-tiny-perl (0.108-1) ... Selecting previously unselected package libtext-levenshtein-perl. Preparing to unpack .../39-libtext-levenshtein-perl_0.13-1_all.deb ... Unpacking libtext-levenshtein-perl (0.13-1) ... Selecting previously unselected package libtry-tiny-perl. 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Setting up libapt-pkg-perl (0.1.34+b1) ... Setting up libstruct-dumb-perl (0.09-1) ... Setting up libio-pty-perl (1:1.08-1.1+b5) ... Setting up libclone-perl (0.41-1+b1) ... Setting up libyaml-0-2:amd64 (0.2.1-1) ... Setting up libhtml-tagset-perl (3.20-3) ... Setting up libsqlite3-0:amd64 (3.27.2-2) ... Setting up libfuture-perl (0.39-1) ... Setting up libyaml-libyaml-perl (0.76+repack-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up perl-openssl-defaults:amd64 (3) ... Setting up libtext-levenshtein-perl (0.13-1) ... Setting up libassuan0:amd64 (2.5.2-1) ... Setting up libio-async-perl (0.72-1) ... Setting up patchutils (0.3.4-2) ... Setting up libdigest-hmac-perl (1.03+dfsg-2) ... Setting up libipc-system-simple-perl (1.25-4) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up diffstat (1.62-1) ... Setting up libipc-run-perl (20180523.0-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libsub-name-perl (0.21-1+b3) ... Setting up libpath-tiny-perl (0.108-1) ... Setting up netbase (5.6) ... Setting up libexporter-tiny-perl (1.002001-1) ... Setting up libclass-accessor-perl (0.51-1) ... Setting up libnet-ip-perl (1.26-2) ... Setting up readline-common (7.0-5) ... Setting up liburi-perl (1.76-1) ... Setting up libreadline7:amd64 (7.0-5) ... Setting up libnet-ssleay-perl (1.85-2+b1) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b4) ... Setting up libnet-dns-perl (1.19-1) ... Setting up libhtml-parser-perl (3.72-3+b3) ... Setting up gpgconf (2.2.13-1) ... Setting up libio-socket-ssl-perl (2.060-3) ... Setting up gpg (2.2.13-1) ... Setting up libcgi-pm-perl (4.40-1) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmailtools-perl (2.18-1) ... Setting up libparse-debianchangelog-perl (1.2.0-13) ... Setting up libemail-valid-perl (1.202-1) ... Setting up lintian (2.11.0) ... Setting up sbuild-build-depends-lintian-dummy:mipsel (0.invalid.0) ... Processing triggers for man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.28-8) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ mummer_3.23+dfsg-4_mipsel.changes: ---------------------------------- Format: 1.8 Date: Mon, 11 Jun 2018 08:38:49 +0200 Source: mummer Binary: mummer mummer-dbgsym Built-For-Profiles: cross nocheck Architecture: mipsel Version: 3.23+dfsg-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: mummer - Efficient sequence alignment of full genomes Closes: 901261 Changes: mummer (3.23+dfsg-4) unstable; urgency=medium . [ Helmut Grohne ] * Fix FTCBFS: Let dh_auto_build pass cross tools to make. (Closes: #901261) . [ Andreas Tille ] * Standards-Version: 4.1.4 * Point Vcs-fields to Salsa * debhelper 11 * doc-base: debhelper 11 moves docs to /usr/share/doc/mummer - adapt path Checksums-Sha1: 642ad17c4e436b0213a08c06418ef7ae979ddacf 4201416 mummer-dbgsym_3.23+dfsg-4_mipsel.deb 21a8cbd3a02b163c4eaad9536e393eee2c026e50 6897 mummer_3.23+dfsg-4_mipsel.buildinfo 734ed5e5213348c10b8bf47791efdc54d871703a 811308 mummer_3.23+dfsg-4_mipsel.deb Checksums-Sha256: 85b0c1105ee57ff56d4b5f3d68d14b7492215eef44712af3325dfa96087f0c55 4201416 mummer-dbgsym_3.23+dfsg-4_mipsel.deb 48c8a39be56cfd1b8b2a38729b06537dbe6eec49402d3f92b4a61082f50829cc 6897 mummer_3.23+dfsg-4_mipsel.buildinfo 65ca3189b1ce2141f08cd6d805058a785a41343fa5339178040111c8d09069cb 811308 mummer_3.23+dfsg-4_mipsel.deb Files: 738bc530c366be88d307b116655ca501 4201416 debug optional mummer-dbgsym_3.23+dfsg-4_mipsel.deb 17082d4128278380217f2fa536bae351 6897 science optional mummer_3.23+dfsg-4_mipsel.buildinfo cae0fa1fb0255dfcbc2b319ebb8ac034 811308 science optional mummer_3.23+dfsg-4_mipsel.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: mummer Binary: mummer mummer-doc Architecture: mipsel Version: 3.23+dfsg-4 Checksums-Md5: 738bc530c366be88d307b116655ca501 4201416 mummer-dbgsym_3.23+dfsg-4_mipsel.deb cae0fa1fb0255dfcbc2b319ebb8ac034 811308 mummer_3.23+dfsg-4_mipsel.deb Checksums-Sha1: 642ad17c4e436b0213a08c06418ef7ae979ddacf 4201416 mummer-dbgsym_3.23+dfsg-4_mipsel.deb 734ed5e5213348c10b8bf47791efdc54d871703a 811308 mummer_3.23+dfsg-4_mipsel.deb Checksums-Sha256: 85b0c1105ee57ff56d4b5f3d68d14b7492215eef44712af3325dfa96087f0c55 4201416 mummer-dbgsym_3.23+dfsg-4_mipsel.deb 65ca3189b1ce2141f08cd6d805058a785a41343fa5339178040111c8d09069cb 811308 mummer_3.23+dfsg-4_mipsel.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Fri, 29 Mar 2019 19:37:11 +0000 Build-Path: /<>/mummer-3.23+dfsg Installed-Build-Depends: autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 10.1), base-passwd (= 3.5.46), bash (= 5.0-2), binutils (= 2.31.1-16), binutils-common (= 2.31.1-16), binutils-x86-64-linux-gnu (= 2.31.1-16), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.33.1-0.1), build-essential (= 12.6), bzip2 (= 1.0.6-9), coreutils (= 8.30-3), cpp (= 4:8.3.0-1), cpp-8 (= 8.3.0-4), dash (= 0.5.10.2-5), debconf (= 1.5.71), debhelper (= 12.1.1), debianutils (= 4.8.6.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.1.2-1), diffutils (= 1:3.7-2), dpkg (= 1.19.6), dpkg-dev (= 1.19.6), dwz (= 0.12-3), fdisk (= 2.33.1-0.1), file (= 1:5.35-4), findutils (= 4.6.0+git+20190209-2), fontconfig-config (= 2.13.1-2), fonts-dejavu-core (= 2.37-1), fonts-lmodern (= 2.004.5-6), g++ (= 4:8.3.0-1), g++-8 (= 8.3.0-4), gcc (= 4:8.3.0-1), gcc-8 (= 8.3.0-4), gcc-8-base (= 8.3.0-4), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), grep (= 3.3-1), groff-base (= 1.22.4-3), gzip (= 1.9-3), hostname (= 3.21), init-system-helpers (= 1.56+nmu1), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-4), libarchive-zip-perl (= 1.64-1), libasan5 (= 8.3.0-4), libatomic1 (= 8.3.0-4), libattr1 (= 1:2.4.48-4), libaudit-common (= 1:2.8.4-2), libaudit1 (= 1:2.8.4-2), libavahi-client3 (= 0.7-4+b1), libavahi-common-data (= 0.7-4+b1), libavahi-common3 (= 0.7-4+b1), libbinutils (= 2.31.1-16), libblkid1 (= 2.33.1-0.1), libbrotli1 (= 1.0.7-2), libbsd0 (= 0.9.1-2), libbz2-1.0 (= 1.0.6-9), libc-bin (= 2.28-8), libc-dev-bin (= 2.28-8), libc6 (= 2.28-8), libc6-dev (= 2.28-8), libcairo2 (= 1.16.0-4), libcap-ng0 (= 0.7.9-2), libcc1-0 (= 8.3.0-4), libcom-err2 (= 1.45.0-1), libcroco3 (= 0.6.12-3), libcups2 (= 2.2.10-5), libcupsimage2 (= 2.2.10-5), libdb5.3 (= 5.3.28+dfsg1-0.6), libdbus-1-3 (= 1.12.12-1), libdebconfclient0 (= 0.249), libdpkg-perl (= 1.19.6), libelf1 (= 0.176-1), libexpat1 (= 2.2.6-1), libfdisk1 (= 2.33.1-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.1.2-1), libfontconfig1 (= 2.13.1-2), libfreetype6 (= 2.9.1-3), libgcc-8-dev (= 8.3.0-4), libgcc1 (= 1:8.3.0-4), libgcrypt20 (= 1.8.4-5), libgdbm-compat4 (= 1.18.1-4), libgdbm6 (= 1.18.1-4), libglib2.0-0 (= 2.58.3-1), libgmp10 (= 2:6.1.2+dfsg-4), libgnutls30 (= 3.6.7-2), libgomp1 (= 8.3.0-4), libgpg-error0 (= 1.35-1), libgraphite2-3 (= 1.3.13-7), libgs9 (= 9.26a~dfsg-2), libgs9-common (= 9.26a~dfsg-2), libgssapi-krb5-2 (= 1.17-2), libharfbuzz-icu0 (= 2.3.1-1), libharfbuzz0b (= 2.3.1-1), libhogweed4 (= 3.4.1-1), libice6 (= 2:1.0.9-2), libicu63 (= 63.1-6), libidn11 (= 1.33-2.2), libidn2-0 (= 2.0.5-1), libijs-0.35 (= 0.35-13), libisl19 (= 0.20-2), libitm1 (= 8.3.0-4), libjbig0 (= 2.1-3.1+b2), libjbig2dec0 (= 0.15-2), libjpeg62-turbo (= 1:1.5.2-2+b1), libk5crypto3 (= 1.17-2), libkeyutils1 (= 1.6-6), libkpathsea6 (= 2018.20181218.49446-2), libkrb5-3 (= 1.17-2), libkrb5support0 (= 1.17-2), liblcms2-2 (= 2.9-3), liblsan0 (= 8.3.0-4), liblz4-1 (= 1.8.3-1), liblzma5 (= 5.2.4-1), libmagic-mgc (= 1:5.35-4), libmagic1 (= 1:5.35-4), libmount1 (= 2.33.1-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-4), libncurses6 (= 6.1+20181013-2), libncursesw6 (= 6.1+20181013-2), libnettle6 (= 3.4.1-1), libopenjp2-7 (= 2.3.0-2), libp11-kit0 (= 0.23.15-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpaper-utils (= 1.1.26), libpaper1 (= 1.1.26), libpcre3 (= 2:8.39-12), libperl5.28 (= 5.28.1-5), libpipeline1 (= 1.5.1-2), libpixman-1-0 (= 0.36.0-1), libpng16-16 (= 1.6.36-5), libpotrace0 (= 1.15-1), libptexenc1 (= 2018.20181218.49446-2), libquadmath0 (= 8.3.0-4), libseccomp2 (= 2.3.3-4), libselinux1 (= 2.8-1+b1), libsigsegv2 (= 2.12-2), libsm6 (= 2:1.2.3-1), libsmartcols1 (= 2.33.1-0.1), libssl1.1 (= 1.1.1b-1), libstdc++-8-dev (= 8.3.0-4), libstdc++6 (= 8.3.0-4), libsynctex2 (= 2018.20181218.49446-2), libsystemd0 (= 241-2), libtasn1-6 (= 4.13-3), libteckit0 (= 2.5.8+ds2-5), libtexlua52 (= 2018.20181218.49446-2), libtexlua53 (= 2018.20181218.49446-2), libtexluajit2 (= 2018.20181218.49446-2), libtiff5 (= 4.0.10-4), libtinfo6 (= 6.1+20181013-2), libtool (= 2.4.6-10), libtsan0 (= 8.3.0-4), libubsan1 (= 8.3.0-4), libuchardet0 (= 0.0.6-3), libudev1 (= 241-2), libunistring2 (= 0.9.10-1), libuuid1 (= 2.33.1-0.1), libwebp6 (= 0.6.1-2), libwoff1 (= 1.0.2-1), libx11-6 (= 2:1.6.7-1), libx11-data (= 2:1.6.7-1), libxau6 (= 1:1.0.8-1+b2), libxaw7 (= 2:1.0.13-1+b2), libxcb-render0 (= 1.13.1-2), libxcb-shm0 (= 1.13.1-2), libxcb1 (= 1.13.1-2), libxdmcp6 (= 1:1.1.2-3), libxext6 (= 2:1.3.3-1+b2), libxi6 (= 2:1.7.9-1), libxml2 (= 2.9.4+dfsg1-7+b3), libxmu6 (= 2:1.1.2-2+b3), libxpm4 (= 1:3.5.12-1), libxrender1 (= 1:0.9.10-1), libxt6 (= 1:1.1.5-1+b3), libxxhash0 (= 0.6.5-3), libzstd1 (= 1.3.8+dfsg-3), libzzip-0-13 (= 0.13.62-3.2), linux-libc-dev (= 4.19.28-2), login (= 1:4.5-1.1), lsb-base (= 10.2019031300), m4 (= 1.4.18-2), make (= 4.2.1-1.2), man-db (= 2.8.5-2), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20181013-2), ncurses-bin (= 6.1+20181013-2), patch (= 2.7.6-3), perl (= 5.28.1-5), perl-base (= 5.28.1-5), perl-modules-5.28 (= 5.28.1-5), po-debconf (= 1.0.21), poppler-data (= 0.4.9-2), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.93-8), t1utils (= 1.41-3), tar (= 1.30+dfsg-5), tex-common (= 6.11), texlive-base (= 2018.20190227-2), texlive-binaries (= 2018.20181218.49446-2), texlive-fonts-recommended (= 2018.20190227-2), texlive-latex-base (= 2018.20190227-2), texlive-latex-recommended (= 2018.20190227-2), ucf (= 3.0038+nmu1), util-linux (= 2.33.1-0.1), x11-common (= 1:7.7+19), xdg-utils (= 1.1.3-1), xz-utils (= 5.2.4-1), zlib1g (= 1:1.2.11.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="POSIX" SOURCE_DATE_EPOCH="1528699129" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ mummer-dbgsym_3.23+dfsg-4_mipsel.deb ------------------------------------ new Debian package, version 2.0. size 4201416 bytes: control archive=1376 bytes. 1073 bytes, 12 lines control 1908 bytes, 18 lines md5sums Package: mummer-dbgsym Source: mummer Version: 3.23+dfsg-4 Auto-Built-Package: debug-symbols Architecture: mipsel Maintainer: Debian Med Packaging Team Installed-Size: 4403 Depends: mummer (= 3.23+dfsg-4) Section: debug Priority: optional Description: debug symbols for mummer Build-Ids: 01b57d43cc79c049ab438de3cf26c131d0e8a4ed 07ed06cd63bb4faa8943a7506b216898562e7fc7 0a4f8bb071685cc7815489fa15eb4f623de9f882 0ce03eea2eb1f06adb2a23e1b2093741385fac89 1e4b59b08e6787ed9ae0c1bdb40853b2386da1c0 1fb06ff524ace85032d4b3a34975d603db47f7d9 24ea39e8a4df46018a592926486d2cfae628550d 2bb73294c3b042354c085d39601990a8075a1734 4fe6441371e7ac6ef739ac304608f262ee394b93 68863cc4e90411d1fc7acfb804e98aeb1f1b638d 8e99c2e1122a552d6b45372fcf51e8fe97ed3879 9279a8564a5f62aef45bf85c3cfa74535e8c3e0e 9ea79d5b3b6328061be1154c155f91a94a1e71e3 b75a1dd724a692acae6a7ae802b889fd91a9cb41 c7fbf7caf64713d664bbc5f6476e0bd757d59875 cec7e7acf48288458a23a1f9e0b31b7470b0185b e6cd430d12d9e784b5dae08b9a2079dc0f4d832b e7e5ba33e6a2161eb09adb4508e6182c9ee38f0d drwxr-xr-x root/root 0 2018-06-11 06:38 ./ drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/ drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/lib/ drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/lib/debug/ drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/lib/debug/.build-id/01/ -rw-r--r-- root/root 609020 2018-06-11 06:38 ./usr/lib/debug/.build-id/01/b57d43cc79c049ab438de3cf26c131d0e8a4ed.debug drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/lib/debug/.build-id/07/ -rw-r--r-- root/root 91136 2018-06-11 06:38 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for rapidly aligning entire genomes, whether in complete or draft form. For example, MUMmer 3.0 can find all 20-basepair or longer exact matches between a pair of 5-megabase genomes in 13.7 seconds, using 78 MB of memory, on a 2.4 GHz Linux desktop computer. MUMmer can also align incomplete genomes; it handles the 100s or 1000s of contigs from a shotgun sequencing project with ease, and will align them to another set of contigs or a genome using the NUCmer program included with the system. If the species are too divergent for DNA sequence alignment to detect similarity, then the PROmer program can generate alignments based upon the six-frame translations of both input sequences. drwxr-xr-x root/root 0 2018-06-11 06:38 ./ drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/ drwxr-xr-x root/root 0 2018-06-11 06:38 ./usr/bin/ -rwxr-xr-x root/root 52852 2018-06-11 06:38 ./usr/bin/combineMUMs -rwxr-xr-x root/root 74360 2018-06-11 06:38 ./usr/bin/delta-filter -rwxr-xr-x root/root 91276 2018-06-11 06:38 ./usr/bin/delta2blocks -rwxr-xr-x root/root 124160 2018-06-11 06:38 ./usr/bin/delta2maf -rwxr-xr-x root/root 26821 2018-06-11 06:38 ./usr/bin/dnadiff -rwxr-xr-x root/root 766 2018-06-11 06:38 ./usr/bin/exact-tandems -rwxr-xr-x root/root 18976 2018-06-11 06:38 ./usr/bin/gaps -rwxr-xr-x root/root 29757 2018-06-11 06:38 ./usr/bin/mapview -rwxr-xr-x root/root 23196 2018-06-11 06:38 ./usr/bin/mgaps -rwxr-xr-x root/root 62332 2018-06-11 06:38 ./usr/bin/mummer -rwxr-xr-x root/root 23320 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root/root 54266 2011-12-17 02:49 ./usr/share/perl5/Foundation.pm +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 36240 Build-Time: 56 Distribution: unstable Foreign Architectures: mipsel Host Architecture: mipsel Install-Time: 40 Job: mummer_3.23+dfsg-4 Lintian: pass Machine Architecture: amd64 Package: mummer Package-Time: 107 Source-Version: 3.23+dfsg-4 Space: 36240 Status: successful Version: 3.23+dfsg-4 -------------------------------------------------------------------------------- Finished at 2019-03-29T19:37:11Z Build needed 00:01:47, 36240k disk space