sbuild (Debian sbuild) 0.81.2+deb11u1 (31 August 2022) on debian-ci-siliconvalley +==============================================================================+ | muscle 1:5.1-1 (armel) Tue, 27 Dec 2022 14:28:15 +0000 | +==============================================================================+ Package: muscle Version: 1:5.1-1 Source Version: 1:5.1-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: armel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-7fc1050b-d7c9-423f-8417-2b9d94898f21' with '<>' I: NOTICE: Log filtering will replace 'build/muscle-G0KSsh/resolver-6SnsLE' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [161 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2022-12-27-0815.45-F-2022-12-27-0214.56.pdiff [21.8 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2022-12-27-0815.45-F-2022-12-27-0214.56.pdiff [21.8 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2022-12-27-0815.45-F-2022-12-27-0214.56.pdiff [91.5 kB] Get:6 http://localhost:3142/debian sid/main armel Packages [8970 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2022-12-27-0815.45-F-2022-12-27-0214.56.pdiff [91.5 kB] Fetched 9372 kB in 3s (3559 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: bash cpp-12 g++-12 gcc-12 gcc-12-base libasan8 libatomic1 libcc1-0 libgcc-12-dev libgcc-s1 libgomp1 libitm1 liblsan0 libquadmath0 libstdc++-12-dev libstdc++6 libtsan2 libubsan1 18 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 53.0 MB of archives. After this operation, 1024 B of additional disk space will be used. Get:1 http://localhost:3142/debian sid/main amd64 bash amd64 5.2-2+b2 [1490 kB] Get:2 http://localhost:3142/debian sid/main amd64 libubsan1 amd64 12.2.0-11 [883 kB] Get:3 http://localhost:3142/debian sid/main amd64 libgomp1 amd64 12.2.0-11 [116 kB] Get:4 http://localhost:3142/debian sid/main amd64 libitm1 amd64 12.2.0-11 [26.1 kB] Get:5 http://localhost:3142/debian sid/main amd64 libatomic1 amd64 12.2.0-11 [9316 B] Get:6 http://localhost:3142/debian sid/main amd64 libasan8 amd64 12.2.0-11 [2193 kB] Get:7 http://localhost:3142/debian sid/main amd64 liblsan0 amd64 12.2.0-11 [969 kB] Get:8 http://localhost:3142/debian sid/main amd64 libquadmath0 amd64 12.2.0-11 [145 kB] Get:9 http://localhost:3142/debian sid/main amd64 gcc-12-base amd64 12.2.0-11 [37.3 kB] Get:10 http://localhost:3142/debian sid/main amd64 libstdc++6 amd64 12.2.0-11 [614 kB] Get:11 http://localhost:3142/debian sid/main amd64 cpp-12 amd64 12.2.0-11 [9766 kB] Get:12 http://localhost:3142/debian sid/main amd64 libcc1-0 amd64 12.2.0-11 [41.8 kB] Get:13 http://localhost:3142/debian sid/main amd64 gcc-12 amd64 12.2.0-11 [19.3 MB] Get:14 http://localhost:3142/debian sid/main amd64 g++-12 amd64 12.2.0-11 [10.7 MB] Get:15 http://localhost:3142/debian sid/main amd64 libstdc++-12-dev amd64 12.2.0-11 [2047 kB] Get:16 http://localhost:3142/debian sid/main amd64 libgcc-12-dev amd64 12.2.0-11 [2436 kB] Get:17 http://localhost:3142/debian sid/main amd64 libtsan2 amd64 12.2.0-11 [2197 kB] Get:18 http://localhost:3142/debian sid/main amd64 libgcc-s1 amd64 12.2.0-11 [49.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 53.0 MB in 0s (196 MB/s) (Reading database ... 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Setting up libitm1:amd64 (12.2.0-11) ... Setting up libgcc-12-dev:amd64 (12.2.0-11) ... Setting up libstdc++-12-dev:amd64 (12.2.0-11) ... Setting up gcc-12 (12.2.0-11) ... Setting up g++-12 (12.2.0-11) ... Processing triggers for debianutils (5.7-0.4) ... Processing triggers for libc-bin (2.36-7) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'muscle' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/muscle.git Please use: git clone https://salsa.debian.org/med-team/muscle.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 195 kB of source archives. Get:1 http://localhost:3142/debian sid/main muscle 1:5.1-1 (dsc) [2006 B] Get:2 http://localhost:3142/debian sid/main muscle 1:5.1-1 (tar) [184 kB] Get:3 http://localhost:3142/debian sid/main muscle 1:5.1-1 (diff) [8712 B] Fetched 195 kB in 0s (0 B/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/muscle-G0KSsh/muscle-5.1' with '<>' I: NOTICE: Log filtering will replace 'build/muscle-G0KSsh' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), debhelper, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel Filtered Build-Depends: debhelper-compat (= 13), debhelper, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [405 B] Get:5 copy:/<>/apt_archive ./ Packages [494 B] Fetched 1856 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdextrautils cpp-12-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-12-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-11-base:armel gcc-12-arm-linux-gnueabi gcc-12-arm-linux-gnueabi-base gcc-12-base:armel gcc-12-cross-base gcc-arm-linux-gnueabi gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:armel libasan8-armel-cross libatomic1:armel libatomic1-armel-cross libc6:armel libc6-armel-cross libc6-dev:armel libc6-dev-armel-cross libcom-err2:armel libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:armel libcrypt1:armel libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:armel libgcc-12-dev-armel-cross libgcc-s1:armel libgcc-s1-armel-cross libgomp1:armel libgomp1-armel-cross libgssapi-krb5-2:armel libicu72 libio-string-perl libk5crypto3:armel libkeyutils1:armel libkrb5-3:armel libkrb5support0:armel liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:armel libnsl2:armel libpipeline1 libssl3:armel libstdc++-11-dev:armel libstdc++-12-dev-armel-cross libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtirpc-dev:armel libtirpc3:armel libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db po-debconf sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-12-locales cpp-12-doc cpp-doc dh-make binutils-multiarch gcc-12-doc manpages-dev flex bison gdb-arm-linux-gnueabi gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armel libc-l10n:armel locales:armel libnss-nis:armel libnss-nisplus:armel manpages-dev:armel krb5-doc:armel krb5-user:armel libstdc++-11-doc:armel libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:armel libarchive-cpio-perl krb5-locales:armel libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdextrautils cpp-12-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-12-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-11-base:armel gcc-12-arm-linux-gnueabi gcc-12-arm-linux-gnueabi-base gcc-12-base:armel gcc-12-cross-base gcc-arm-linux-gnueabi gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:armel libasan8-armel-cross libatomic1:armel libatomic1-armel-cross libc6:armel libc6-armel-cross libc6-dev:armel libc6-dev-armel-cross libcom-err2:armel libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:armel libcrypt1:armel libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:armel libgcc-12-dev-armel-cross libgcc-s1:armel libgcc-s1-armel-cross libgomp1:armel libgomp1-armel-cross libgssapi-krb5-2:armel libicu72 libio-string-perl libk5crypto3:armel libkeyutils1:armel libkrb5-3:armel libkrb5support0:armel liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:armel libnsl2:armel libpipeline1 libssl3:armel libstdc++-11-dev:armel libstdc++-12-dev-armel-cross libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtirpc-dev:armel libtirpc3:armel libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:armel sensible-utils ucf 0 upgraded, 94 newly installed, 0 to remove and 0 not upgraded. Need to get 82.7 MB of archives. After this operation, 335 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [920 B] Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-5 [15.4 kB] Get:3 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:4 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.41-4 [295 kB] Get:5 http://localhost:3142/debian sid/main amd64 libmagic1 amd64 1:5.41-4 [129 kB] Get:6 http://localhost:3142/debian sid/main amd64 file amd64 1:5.41-4 [67.0 kB] Get:7 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-10 [160 kB] Get:8 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:9 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.22.4-9 [916 kB] Get:10 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.38.1-4 [86.2 kB] Get:11 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get:12 http://localhost:3142/debian sid/main amd64 man-db amd64 2.11.1-1 [1384 kB] Get:13 http://localhost:3142/debian sid/main amd64 ucf all 3.0043 [74.0 kB] Get:14 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-1 [291 kB] Get:15 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-2 [343 kB] Get:16 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:17 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:18 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-10 [495 kB] Get:19 http://localhost:3142/debian sid/main amd64 binutils-arm-linux-gnueabi amd64 2.39.50.20221224-1 [3232 kB] Get:20 http://localhost:3142/debian sid/main amd64 gcc-12-arm-linux-gnueabi-base amd64 12.2.0-9cross2 [37.3 kB] Get:21 http://localhost:3142/debian sid/main amd64 cpp-12-arm-linux-gnueabi amd64 12.2.0-9cross2 [8663 kB] Get:22 http://localhost:3142/debian sid/main amd64 cpp-arm-linux-gnueabi amd64 4:12.2.0-1 [17.2 kB] Get:23 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.20 [16.3 kB] Get:24 http://localhost:3142/debian sid/main amd64 gcc-12-cross-base all 12.2.0-9cross2 [32.8 kB] Get:25 http://localhost:3142/debian sid/main amd64 libc6-armel-cross all 2.36-3cross1 [885 kB] Get:26 http://localhost:3142/debian sid/main amd64 libgcc-s1-armel-cross all 12.2.0-9cross2 [38.4 kB] Get:27 http://localhost:3142/debian sid/main amd64 libgomp1-armel-cross all 12.2.0-9cross2 [96.8 kB] Get:28 http://localhost:3142/debian sid/main amd64 libatomic1-armel-cross all 12.2.0-9cross2 [8912 B] Get:29 http://localhost:3142/debian sid/main amd64 libasan8-armel-cross all 12.2.0-9cross2 [2092 kB] Get:30 http://localhost:3142/debian sid/main amd64 libstdc++6-armel-cross all 12.2.0-9cross2 [464 kB] Get:31 http://localhost:3142/debian sid/main amd64 libubsan1-armel-cross all 12.2.0-9cross2 [862 kB] Get:32 http://localhost:3142/debian sid/main amd64 libgcc-12-dev-armel-cross all 12.2.0-9cross2 [732 kB] Get:33 http://localhost:3142/debian sid/main amd64 gcc-12-arm-linux-gnueabi amd64 12.2.0-9cross2 [17.0 MB] Get:34 http://localhost:3142/debian sid/main amd64 gcc-arm-linux-gnueabi amd64 4:12.2.0-1 [1452 B] Get:35 http://localhost:3142/debian sid/main amd64 linux-libc-dev-armel-cross all 6.0.6-2cross1 [1763 kB] Get:36 http://localhost:3142/debian sid/main amd64 libc6-dev-armel-cross all 2.36-3cross1 [1284 kB] Get:37 http://localhost:3142/debian sid/main amd64 libstdc++-12-dev-armel-cross all 12.2.0-9cross2 [2033 kB] Get:38 http://localhost:3142/debian sid/main amd64 g++-12-arm-linux-gnueabi amd64 12.2.0-9cross2 [9594 kB] Get:39 http://localhost:3142/debian sid/main amd64 g++-arm-linux-gnueabi amd64 4:12.2.0-1 [1176 B] Get:40 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:41 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:42 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get:43 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1.1+b2 [687 kB] Get:44 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:45 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:46 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:47 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b1 [322 kB] Get:48 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:49 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.30-2 [63.4 kB] Get:50 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:51 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:52 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:53 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:54 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.20 [25.8 kB] Get:55 http://localhost:3142/debian sid/main amd64 crossbuild-essential-armel all 12.9 [6704 B] Get:56 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.11.3 [81.1 kB] Get:57 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-5 [517 kB] Get:58 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:59 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:60 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get:61 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.0-2 [19.4 kB] Get:62 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.0-2 [8556 B] Get:63 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.188-2 [173 kB] Get:64 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1 [109 kB] Get:65 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-10 [1300 kB] Get:66 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:67 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:68 http://localhost:3142/debian sid/main amd64 debhelper all 13.11.3 [942 kB] Get:69 http://localhost:3142/debian sid/main armel gcc-11-base armel 11.3.0-8 [209 kB] Get:70 http://localhost:3142/debian sid/main armel gcc-12-base armel 12.2.0-11 [37.3 kB] Get:71 http://localhost:3142/debian sid/main armel libgcc-s1 armel 12.2.0-11 [38.4 kB] Get:72 http://localhost:3142/debian sid/main armel libc6 armel 2.36-7 [2188 kB] Get:73 http://localhost:3142/debian sid/main armel libasan6 armel 11.3.0-8 [1945 kB] Get:74 http://localhost:3142/debian sid/main armel libatomic1 armel 12.2.0-11 [9156 B] Get:75 http://localhost:3142/debian sid/main armel linux-libc-dev armel 6.0.12-1 [1657 kB] Get:76 http://localhost:3142/debian sid/main armel libcrypt1 armel 1:4.4.33-1 [96.0 kB] Get:77 http://localhost:3142/debian sid/main armel libcrypt-dev armel 1:4.4.33-1 [125 kB] Get:78 http://localhost:3142/debian sid/main armel libcom-err2 armel 1.46.6~rc1-1+b1 [14.2 kB] Get:79 http://localhost:3142/debian sid/main armel libkrb5support0 armel 1.20.1-1 [29.2 kB] Get:80 http://localhost:3142/debian sid/main armel libk5crypto3 armel 1.20.1-1 [74.0 kB] Get:81 http://localhost:3142/debian sid/main armel libkeyutils1 armel 1.6.3-2 [7864 B] Get:82 http://localhost:3142/debian sid/main armel libssl3 armel 3.0.7-1 [1621 kB] Get:83 http://localhost:3142/debian sid/main armel libkrb5-3 armel 1.20.1-1 [284 kB] Get:84 http://localhost:3142/debian sid/main armel libgssapi-krb5-2 armel 1.20.1-1 [110 kB] Get:85 http://localhost:3142/debian sid/main armel libtirpc3 armel 1.3.3+ds-1 [72.0 kB] Get:86 http://localhost:3142/debian sid/main armel libnsl2 armel 1.3.0-2 [33.0 kB] Get:87 http://localhost:3142/debian sid/main armel libtirpc-dev armel 1.3.3+ds-1 [182 kB] Get:88 http://localhost:3142/debian sid/main armel libnsl-dev armel 1.3.0-2 [61.7 kB] Get:89 http://localhost:3142/debian sid/main armel libc6-dev armel 2.36-7 [1288 kB] Get:90 http://localhost:3142/debian sid/main armel libgomp1 armel 12.2.0-11 [99.1 kB] Get:91 http://localhost:3142/debian sid/main armel libstdc++6 armel 12.2.0-11 [506 kB] Get:92 http://localhost:3142/debian sid/main armel libubsan1 armel 12.2.0-11 [862 kB] Get:93 http://localhost:3142/debian sid/main armel libgcc-11-dev armel 11.3.0-8 [702 kB] Get:94 http://localhost:3142/debian sid/main armel libstdc++-11-dev armel 11.3.0-8 [1974 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 82.7 MB in 0s (179 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 15711 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-5_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.17_all.deb ... Unpacking sensible-utils (0.0.17) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.41-4_amd64.deb ... Unpacking libmagic-mgc (1:5.41-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.41-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.41-4) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.41-4_amd64.deb ... Unpacking file (1:5.41-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.21-10_amd64.deb ... Unpacking gettext-base (0.21-10) ... 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Selecting previously unselected package libtirpc-dev:armel. Preparing to unpack .../85-libtirpc-dev_1.3.3+ds-1_armel.deb ... Unpacking libtirpc-dev:armel (1.3.3+ds-1) ... Selecting previously unselected package libnsl-dev:armel. Preparing to unpack .../86-libnsl-dev_1.3.0-2_armel.deb ... Unpacking libnsl-dev:armel (1.3.0-2) ... Selecting previously unselected package libc6-dev:armel. Preparing to unpack .../87-libc6-dev_2.36-7_armel.deb ... Unpacking libc6-dev:armel (2.36-7) ... Selecting previously unselected package libgomp1:armel. Preparing to unpack .../88-libgomp1_12.2.0-11_armel.deb ... Unpacking libgomp1:armel (12.2.0-11) ... Selecting previously unselected package libstdc++6:armel. Preparing to unpack .../89-libstdc++6_12.2.0-11_armel.deb ... Unpacking libstdc++6:armel (12.2.0-11) ... Selecting previously unselected package libubsan1:armel. Preparing to unpack .../90-libubsan1_12.2.0-11_armel.deb ... Unpacking libubsan1:armel (12.2.0-11) ... Selecting previously unselected package libgcc-11-dev:armel. Preparing to unpack .../91-libgcc-11-dev_11.3.0-8_armel.deb ... Unpacking libgcc-11-dev:armel (11.3.0-8) ... Selecting previously unselected package libstdc++-11-dev:armel. Preparing to unpack .../92-libstdc++-11-dev_11.3.0-8_armel.deb ... Unpacking libstdc++-11-dev:armel (11.3.0-8) ... Selecting previously unselected package sbuild-build-depends-main-dummy:armel. Preparing to unpack .../93-sbuild-build-depends-main-dummy_0.invalid.0_armel.deb ... Unpacking sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-2) ... Setting up libpipeline1:amd64 (1.5.7-1) ... Setting up gcc-11-base:armel (11.3.0-8) ... Setting up libfile-which-perl (1.27-2) ... Setting up binutils-arm-linux-gnueabi (2.39.50.20221224-1) ... Setting up libicu72:amd64 (72.1-3) ... Setting up gcc-12-cross-base (12.2.0-9cross2) ... Setting up bsdextrautils (2.38.1-4) ... Setting up libmagic-mgc (1:5.41-4) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.11.3) ... Setting up libmagic1:amd64 (1:5.41-4) ... Setting up linux-libc-dev:armel (6.0.12-1) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-10) ... Setting up m4 (1.4.19-1) ... Setting up file (1:5.41-4) ... Setting up libyaml-perl (1.30-2) ... Setting up linux-libc-dev-armel-cross (6.0.6-2cross1) ... Setting up gcc-12-base:armel (12.2.0-11) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-3.1) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.20) ... Setting up autopoint (0.21-10) ... Setting up autoconf (2.71-2) ... Setting up libc6-armel-cross (2.36-3cross1) ... Setting up sensible-utils (0.0.17) ... Setting up gcc-12-arm-linux-gnueabi-base:amd64 (12.2.0-9cross2) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libc6-dev-armel-cross (2.36-3cross1) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up libelf1:amd64 (0.188-2) ... Setting up cpp-12-arm-linux-gnueabi (12.2.0-9cross2) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.1+b2) ... Setting up liblocale-gettext-perl (1.07-5) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.0-2) ... Setting up gettext (0.21-10) ... Setting up libgomp1-armel-cross (12.2.0-9cross2) ... Setting up libtool (2.4.7-5) ... Setting up libgcc-s1-armel-cross (12.2.0-9cross2) ... Setting up libstdc++6-armel-cross (12.2.0-9cross2) ... Setting up libatomic1-armel-cross (12.2.0-9cross2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up cpp-arm-linux-gnueabi (4:12.2.0-1) ... Setting up libubsan1-armel-cross (12.2.0-9cross2) ... Setting up ucf (3.0043) ... Setting up dh-strip-nondeterminism (1.13.0-2) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-9) ... Setting up libasan8-armel-cross (12.2.0-9cross2) ... Setting up libgcc-12-dev-armel-cross (12.2.0-9cross2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.11.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-12-arm-linux-gnueabi (12.2.0-9cross2) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-arm-linux-gnueabi (4:12.2.0-1) ... Setting up libstdc++-12-dev-armel-cross (12.2.0-9cross2) ... Setting up debhelper (13.11.3) ... Setting up libxml-simple-perl (2.25-2) ... Setting up g++-12-arm-linux-gnueabi (12.2.0-9cross2) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up g++-arm-linux-gnueabi (4:12.2.0-1) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-armel (12.9) ... Setting up libgcc-s1:armel (12.2.0-11) ... Setting up libc6:armel (2.36-7) ... Setting up libstdc++6:armel (12.2.0-11) ... Setting up libkeyutils1:armel (1.6.3-2) ... Setting up libcrypt1:armel (1:4.4.33-1) ... Setting up libcom-err2:armel (1.46.6~rc1-1+b1) ... Setting up libgomp1:armel (12.2.0-11) ... Setting up libasan6:armel (11.3.0-8) ... Setting up libkrb5support0:armel (1.20.1-1) ... Setting up libatomic1:armel (12.2.0-11) ... Setting up libk5crypto3:armel (1.20.1-1) ... Setting up libubsan1:armel (12.2.0-11) ... Setting up libgcc-11-dev:armel (11.3.0-8) ... Setting up libcrypt-dev:armel (1:4.4.33-1) ... Setting up libssl3:armel (3.0.7-1) ... Setting up libkrb5-3:armel (1.20.1-1) ... Setting up libgssapi-krb5-2:armel (1.20.1-1) ... Setting up libtirpc3:armel (1.3.3+ds-1) ... Setting up libtirpc-dev:armel (1.3.3+ds-1) ... Setting up libnsl2:armel (1.3.0-2) ... Setting up libnsl-dev:armel (1.3.0-2) ... Setting up libc6-dev:armel (2.36-7) ... Setting up libstdc++-11-dev:armel (11.3.0-8) ... Setting up sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Processing triggers for libc-bin (2.36-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armel included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.10.0-19-amd64 #1 SMP Debian 5.10.149-2 (2022-10-21) amd64 (x86_64) Toolchain package versions: binutils_2.39.50.20221224-1 dpkg-dev_1.21.13 g++-11_11.3.0-8 g++-12_12.2.0-11 gcc-11_11.3.0-8 gcc-12_12.2.0-11 libc6-dev_2.36-7 libstdc++-11-dev_11.3.0-8 libstdc++-12-dev_12.2.0-11 libstdc++-12-dev-armel-cross_12.2.0-9cross2 libstdc++6_12.2.0-11 libstdc++6-armel-cross_12.2.0-9cross2 linux-libc-dev_6.0.12-1 Package versions: adduser_3.130 apt_2.5.4 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-10 autotools-dev_20220109.1 base-files_12.3 base-passwd_3.6.1 bash_5.2-2+b2 binutils_2.39.50.20221224-1 binutils-arm-linux-gnueabi_2.39.50.20221224-1 binutils-common_2.39.50.20221224-1 binutils-x86-64-linux-gnu_2.39.50.20221224-1 bsdextrautils_2.38.1-4 bsdutils_1:2.38.1-4 build-essential_12.9 bzip2_1.0.8-5+b1 coreutils_9.1-1 cpp_4:12.2.0-1 cpp-11_11.3.0-8 cpp-12_12.2.0-11 cpp-12-arm-linux-gnueabi_12.2.0-9cross2 cpp-arm-linux-gnueabi_4:12.2.0-1 cross-config_2.6.20 crossbuild-essential-armel_12.9 dash_0.5.11+git20210903+057cd650a4ed-9 debconf_1.5.80 debhelper_13.11.3 debian-archive-keyring_2021.1.1 debianutils_5.7-0.4 dh-autoreconf_20 dh-strip-nondeterminism_1.13.0-2 diffutils_1:3.8-3 dpkg_1.21.13 dpkg-cross_2.6.20 dpkg-dev_1.21.13 dwz_0.15-1 e2fsprogs_1.46.6~rc1-1+b1 fakeroot_1.30.1-1 file_1:5.41-4 findutils_4.9.0-3 g++_4:12.2.0-1 g++-11_11.3.0-8 g++-12_12.2.0-11 g++-12-arm-linux-gnueabi_12.2.0-9cross2 g++-arm-linux-gnueabi_4:12.2.0-1 gcc_4:12.2.0-1 gcc-11_11.3.0-8 gcc-11-base_11.3.0-8 gcc-12_12.2.0-11 gcc-12-arm-linux-gnueabi_12.2.0-9cross2 gcc-12-arm-linux-gnueabi-base_12.2.0-9cross2 gcc-12-base_12.2.0-11 gcc-12-cross-base_12.2.0-9cross2 gcc-9-base_9.5.0-2+b2 gcc-arm-linux-gnueabi_4:12.2.0-1 gettext_0.21-10 gettext-base_0.21-10 gpgv_2.2.40-1 grep_3.8-3 groff-base_1.22.4-9 gzip_1.12-1 hostname_3.23 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-2 libapt-pkg6.0_2.5.4 libarchive-zip-perl_1.68-1 libasan6_11.3.0-8 libasan8_12.2.0-11 libasan8-armel-cross_12.2.0-9cross2 libatomic1_12.2.0-11 libatomic1-armel-cross_12.2.0-9cross2 libattr1_1:2.5.1-3 libaudit-common_1:3.0.7-1.1 libaudit1_1:3.0.7-1.1+b2 libbinutils_2.39.50.20221224-1 libblkid1_2.38.1-4 libbz2-1.0_1.0.8-5+b1 libc-bin_2.36-7 libc-dev-bin_2.36-7 libc6_2.36-7 libc6-armel-cross_2.36-3cross1 libc6-dev_2.36-7 libc6-dev-armel-cross_2.36-3cross1 libcap-ng0_0.8.3-1+b2 libcap2_1:2.66-3 libcc1-0_12.2.0-11 libcom-err2_1.46.6~rc1-1+b1 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-2 libcrypt-dev_1:4.4.33-1 libcrypt1_1:4.4.33-1 libctf-nobfd0_2.39.50.20221224-1 libctf0_2.39.50.20221224-1 libdb5.3_5.3.28+dfsg1-0.10 libdebconfclient0_0.265 libdebhelper-perl_13.11.3 libdebian-dpkgcross-perl_2.6.20 libdpkg-perl_1.21.13 libelf1_0.188-2 libext2fs2_1.46.6~rc1-1+b1 libfakeroot_1.30.1-1 libffi8_3.4.4-1 libfile-find-rule-perl_0.34-3 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.13.0-2 libfile-which-perl_1.27-2 libgcc-11-dev_11.3.0-8 libgcc-12-dev_12.2.0-11 libgcc-12-dev-armel-cross_12.2.0-9cross2 libgcc-s1_12.2.0-11 libgcc-s1-armel-cross_12.2.0-9cross2 libgcrypt20_1.10.1-3 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgmp10_2:6.2.1+dfsg1-1.1 libgnutls30_3.7.8-4 libgomp1_12.2.0-11 libgomp1-armel-cross_12.2.0-9cross2 libgpg-error0_1.46-1 libgprofng0_2.39.50.20221224-1 libgssapi-krb5-2_1.20.1-1 libhogweed6_3.8.1-2 libicu72_72.1-3 libidn2-0_2.3.3-1+b1 libio-string-perl_1.08-3.1 libisl23_0.25-1 libitm1_12.2.0-11 libjansson4_2.14-2 libk5crypto3_1.20.1-1 libkeyutils1_1.6.3-2 libkrb5-3_1.20.1-1 libkrb5support0_1.20.1-1 liblocale-gettext-perl_1.07-5 liblsan0_12.2.0-11 liblz4-1_1.9.4-1 liblzma5_5.4.0-0.1 libmagic-mgc_1:5.41-4 libmagic1_1:5.41-4 libmd0_1.0.4-2 libmount1_2.38.1-4 libmpc3_1.3.1-1 libmpfr6_4.1.1-1 libnettle8_3.8.1-2 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnumber-compare-perl_0.03-3 libp11-kit0_0.24.1-1 libpam-modules_1.5.2-5 libpam-modules-bin_1.5.2-5 libpam-runtime_1.5.2-5 libpam0g_1.5.2-5 libpcre2-8-0_10.40-3 libpcre3_2:8.39-15 libperl5.34_5.34.0-5 libperl5.36_5.36.0-6 libpipeline1_1.5.7-1 libquadmath0_12.2.0-11 libseccomp2_2.5.4-1+b2 libselinux1_3.4-1+b4 libsemanage-common_3.4-1 libsemanage2_3.4-1+b4 libsepol2_3.4-2 libsmartcols1_2.38.1-4 libss2_1.46.6~rc1-1+b1 libssl3_3.0.7-1 libstdc++-11-dev_11.3.0-8 libstdc++-12-dev_12.2.0-11 libstdc++-12-dev-armel-cross_12.2.0-9cross2 libstdc++6_12.2.0-11 libstdc++6-armel-cross_12.2.0-9cross2 libsub-override-perl_0.09-4 libsystemd0_252.4-1 libtasn1-6_4.19.0-2 libtext-glob-perl_0.11-3 libtinfo6_6.3+20220423-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-5 libtsan0_11.3.0-8 libtsan2_12.2.0-11 libubsan1_12.2.0-11 libubsan1-armel-cross_12.2.0-9cross2 libuchardet0_0.0.7-1 libudev1_252.4-1 libunistring2_1.0-2 libuuid1_2.38.1-4 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b1 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-2 libxml2_2.9.14+dfsg-1.1+b2 libxxhash0_0.8.1-1 libyaml-perl_1.30-2 libzstd1_1.5.2+dfsg-1 linux-libc-dev_6.0.12-1 linux-libc-dev-armel-cross_6.0.6-2cross1 login_1:4.13+dfsg1-1 logsave_1.46.6~rc1-1+b1 m4_1.4.19-1 make_4.3-4.1 man-db_2.11.1-1 mawk_1.3.4.20200120-3.1 mount_2.38.1-4 ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 passwd_1:4.13+dfsg1-1 patch_2.7.6-7 perl_5.36.0-6 perl-base_5.36.0-6 perl-modules-5.34_5.34.0-5 perl-modules-5.36_5.36.0-6 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.06-2 tar_1.34+dfsg-1.1 tzdata_2022f-1 ucf_3.0043 usrmerge_35 util-linux_2.38.1-4 util-linux-extra_2.38.1-4 xz-utils_5.4.0-0.1 zlib1g_1:1.2.13.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: muscle Binary: muscle Architecture: any Version: 1:5.1-1 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Charles Plessy , Andreas Tille Homepage: https://www.drive5.com/muscle/ Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/muscle Vcs-Git: https://salsa.debian.org/med-team/muscle.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), debhelper Package-List: muscle deb science optional arch=any Checksums-Sha1: ed05f00fd212743dec7772588013c51a37b407ae 183891 muscle_5.1.orig.tar.gz 6753d6d72dcc2fad30c594610d05510d7b8eea3d 8712 muscle_5.1-1.debian.tar.xz Checksums-Sha256: 091d9f8733b92ff106c2a8eb274d1e5a57960d397a2068d8638d6002e8880dab 183891 muscle_5.1.orig.tar.gz 54254e9cc4cd446788c10bdf45bc1e5abf34ac0da283a832bea3074db005ae44 8712 muscle_5.1-1.debian.tar.xz Files: 99b5ef38a119994e7a8f0ea7a12b5987 183891 muscle_5.1.orig.tar.gz 09c5026e0dcb85b75d4b0d4c1fe8d5a9 8712 muscle_5.1-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmHlehYRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEc+xAAhwGtcs7UjxBy6LVy12n8FcuDThPp3G4a 3fGsEB7moYwfy974FnpeYNtfj48HbE5O/AbB7A7kWYmgq77yBrONAdaI0/rVAq+s x0kDweIAcDsozTiONsj74ry7d4FES7pfMIW4zx5rdB3oaWJ57fPnXEUcM3GD22mE Mofgz/6N3enoJOVHw+8+wkPWOuD2+/b8FArOdfmyzL0WX8UVVjvKpHUxJEf+395l 0ETJuTdCg7PGebyvi+3tLx8cCn7Zzf7BrNYwCXeQTqLmSBq+PeEzwlxxOIbrultV ykydFbI0fnHFnnvpmTZHysPOmIzhAGnmgTo7r+W/IwzitjQ0gIHkSBp7ltWLbH+X bP07lJizF4cTqh2udIGKBVvJ07LVxt+UMHmNH+1FOUvSqERlRqcsF2O+cGd+Tiwp abzpJVTe6PVkUQgcklgeuDh2yFvb+Bc1G13WvLNt1lcJnFW9QuKZPvA3VzP/LrXI 4BQbc17ADJiIboShYoBiOqCY0Pjgvk05Uo5bMMQV0Nq+mQbW0rg90iRhJzYg+Gsz YQkuvrW7rmDFY2dRNEjVjvDe0wMHOw98Pkd/RaPlb0RbP2eWkOJ9yk8eZePHnwrO NTjQv1taEdyXzasRdpICFgAra26rtE40/c0T6KBxQNRdW2KRTQ0/14hHuHp+IBmL 5cn4XENbxGk= =8MXi -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-gpg-verify.UutrTrQ8/trustedkeys.kbx': General error gpgv: Signature made Mon Jan 17 14:15:50 2022 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./muscle_5.1-1.dsc: no acceptable signature found dpkg-source: info: extracting muscle in /<> dpkg-source: info: unpacking muscle_5.1.orig.tar.gz dpkg-source: info: unpacking muscle_5.1-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying makefile.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-7fc1050b-d7c9-423f-8417-2b9d94898f21 SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aarmel -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package muscle dpkg-buildpackage: info: source version 1:5.1-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabi does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armel debian/rules clean dh clean --sourcedirectory=src dh_auto_clean -O--sourcedirectory=src cd src && make -j1 clean make[1]: Entering directory '/<>/src' rm -rf gitver.txt Linux/ make[1]: Leaving directory '/<>/src' dh_autoreconf_clean -O--sourcedirectory=src dh_clean -O--sourcedirectory=src debian/rules binary-arch dh binary-arch --sourcedirectory=src dh_update_autotools_config -a -O--sourcedirectory=src dh_autoreconf -a -O--sourcedirectory=src dh_auto_configure -a -O--sourcedirectory=src debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build -- 'GPP=$(CXX)' cd src && make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabi-pkg-config CXX=arm-linux-gnueabi-g\+\+ CC=arm-linux-gnueabi-gcc GPP=\$\(CXX\) make[2]: Entering directory '/<>/src' bash ./gitver.bash ./gitver.bash: line 5: git: command not found "" mkdir -p Linux/ arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/addconfseq.o addconfseq.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/align.o align.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/alignpairflat.o alignpairflat.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/allocflat.o allocflat.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/alnalnsflat.o alnalnsflat.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/alnmsasflat.o alnmsasflat.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/alnmsasflat3.o alnmsasflat3.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/alpha.o alpha.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/alpha3.o alpha3.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/assertsameseqs.o assertsameseqs.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/buildposterior3flat.o buildposterior3flat.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/buildpostflat.o buildpostflat.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/bwdflat3.o bwdflat3.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/calcalnflat.o calcalnflat.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/calcalnscoreflat.o calcalnscoreflat.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/calcalnscoresparse.o calcalnscoresparse.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/calcposteriorflat.o calcposteriorflat.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/colscoreefa.o colscoreefa.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/consflat.o consflat.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/conspairflat.o conspairflat.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/defaulthmmparams.o defaulthmmparams.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/derep.o derep.cpp derep.cpp: In member function ‘uint Derep::CalcHash(const Sequence*) const’: derep.cpp:15:19: warning: conversion from ‘long long unsigned int’ to ‘uint64’ {aka ‘long unsigned int’} changes value from ‘14695981039346656037’ to ‘2216829733’ [-Woverflow] 15 | uint64 hash = 0xcbf29ce484222325uL; | ^~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/diagbox.o diagbox.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/disperse.o disperse.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/dividetree.o dividetree.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/eacluster.o eacluster.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/eadistmx.o eadistmx.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/eadistmxmsas.o eadistmxmsas.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/eesort.o eesort.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/efabestcols.o efabestcols.cpp In file included from /usr/arm-linux-gnueabi/include/c++/12/vector:70, from myutils.h:25, from muscle.h:21, from efabestcols.cpp:1: /usr/arm-linux-gnueabi/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 439 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/vector:64: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void cmd_efa_bestcols()’ at efabestcols.cpp:46:18: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/efabestconf.o efabestconf.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/efaexplode.o efaexplode.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/efastats.o efastats.cpp In file included from /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:60, from /usr/arm-linux-gnueabi/include/c++/12/algorithm:61, from myutils.h:32, from muscle.h:21, from efastats.cpp:1: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1802 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1908 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/vector:70, from myutils.h:25: /usr/arm-linux-gnueabi/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 439 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/vector:64: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void CmpRef(const Ensemble&, const MSA&, double, std::vector&, std::vector&)’ at efastats.cpp:21:15, inlined from ‘void cmd_efastats()’ at efastats.cpp:41:9: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void CmpRef(const Ensemble&, const MSA&, double, std::vector&, std::vector&)’ at efastats.cpp:22:16, inlined from ‘void cmd_efastats()’ at efastats.cpp:41:9: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void cmd_efastats()’ at efastats.cpp:70:16: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:4820:18, inlined from ‘void cmd_efastats()’ at efastats.cpp:78:6: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1937 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1938 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1939 | __comp); | ~~~~~~~ In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1940:31, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:4820:18, inlined from ‘void cmd_efastats()’ at efastats.cpp:78:6: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1854 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:4820:18, inlined from ‘void cmd_efastats()’ at efastats.cpp:87:7: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1937 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1938 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1939 | __comp); | ~~~~~~~ In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1940:31, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:4820:18, inlined from ‘void cmd_efastats()’ at efastats.cpp:87:7: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1854 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:4820:18, inlined from ‘void cmd_efastats()’ at efastats.cpp:88:7: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1937 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1938 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1939 | __comp); | ~~~~~~~ In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1940:31, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:4820:18, inlined from ‘void cmd_efastats()’ at efastats.cpp:88:7: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1854 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/ensemble.o ensemble.cpp In file included from /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:60, from /usr/arm-linux-gnueabi/include/c++/12/algorithm:61, from myutils.h:32, from muscle.h:21, from ensemble.cpp:1: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1802 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1908 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/vector:70, from myutils.h:25: /usr/arm-linux-gnueabi/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 439 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/vector:64: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void Ensemble::GetTestUniqueIxs(uint, const std::set >&, std::vector&, std::vector&) const’ at ensemble.cpp:915:19: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void Ensemble::GetDispersion(double, double&, double&) const’ at ensemble.cpp:776:16: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void Ensemble::GetDispersion(double, double&, double&) const’ at ensemble.cpp:777:17: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:4820:18, inlined from ‘void Ensemble::GetDispersion(double, double&, double&) const’ at ensemble.cpp:780:6: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1937 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1938 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1939 | __comp); | ~~~~~~~ In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1940:31, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:4820:18, inlined from ‘void Ensemble::GetDispersion(double, double&, double&) const’ at ensemble.cpp:780:6: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1854 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:4820:18, inlined from ‘void Ensemble::GetDispersion(double, double&, double&) const’ at ensemble.cpp:781:6: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1937 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1938 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1939 | __comp); | ~~~~~~~ In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1940:31, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:4820:18, inlined from ‘void Ensemble::GetDispersion(double, double&, double&) const’ at ensemble.cpp:781:6: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1854 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘double Ensemble::GetMedianConf(uint) const’ at ensemble.cpp:672:18: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:4820:18, inlined from ‘double Ensemble::GetMedianConf(uint) const’ at ensemble.cpp:674:6: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1937 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1938 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1939 | __comp); | ~~~~~~~ In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1940:31, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:4820:18, inlined from ‘double Ensemble::GetMedianConf(uint) const’ at ensemble.cpp:674:6: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1854 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/fa2efa.o fa2efa.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/fasta.o fasta.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/fasta2.o fasta2.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/fwdflat3.o fwdflat3.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/getconsseq.o getconsseq.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/getpairs.o getpairs.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/getpostpairsalignedflat.o getpostpairsalignedflat.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/globalinputms.o globalinputms.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/guidetreejoinorder.o guidetreejoinorder.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/heatmapcolors.o heatmapcolors.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/help.o help.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/hmmdump.o hmmdump.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/hmmparams.o hmmparams.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/jalview.o jalview.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/jointrees.o jointrees.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/letterconf.o letterconf.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/letterconfhtml.o letterconfhtml.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/logaln.o logaln.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/logdistmx.o logdistmx.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/logmx.o logmx.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/main.o main.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/make_a2m.o make_a2m.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/maxcc.o maxcc.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/mpcflat.o mpcflat.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/msa.o msa.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/msa2.o msa2.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/msastats.o msastats.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/multisequence.o multisequence.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/mysparsemx.o mysparsemx.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/myutils.o myutils.cpp myutils.cpp:1626:31: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 1626 | Log(" built %s %s\n", __DATE__, __TIME__); | ^~~~~~~~ myutils.cpp:1626:41: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 1626 | Log(" built %s %s\n", __DATE__, __TIME__); | ^~~~~~~~ myutils.cpp:2091:37: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2091 | fprintf(f, "Built %s %s\n", __DATE__, __TIME__); | ^~~~~~~~ myutils.cpp:2091:47: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2091 | fprintf(f, "Built %s %s\n", __DATE__, __TIME__); | ^~~~~~~~ myutils.cpp:2114:37: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2114 | fprintf(f, "Built %s %s\n", __DATE__, __TIME__); | ^~~~~~~~ myutils.cpp:2114:47: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2114 | fprintf(f, "Built %s %s\n", __DATE__, __TIME__); | ^~~~~~~~ myutils.cpp: In function ‘void IncrementRand()’: myutils.cpp:2267:32: warning: right shift count >= width of type [-Wshift-count-overflow] 2267 | g_X[4] = (uint32) (Sum >> 32); | ~~~~^~~~~ arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/pairhmm.o pairhmm.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/permutetree.o permutetree.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/perturbhmm.o perturbhmm.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/pprog.o pprog.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/pprog2.o pprog2.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/pprogt.o pprogt.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/probcons.o probcons.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/progalnflat.o progalnflat.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/project.o project.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/qscore.o qscore.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/qscore2.o qscore2.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/qscoreefa.o qscoreefa.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/qscorer.o qscorer.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/quarts.o quarts.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/randomchaintree.o randomchaintree.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/refineflat.o refineflat.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/relabel.o relabel.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/relaxflat.o relaxflat.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/resample.o resample.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/seb8.o seb8.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/seq.o seq.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/sequence.o sequence.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/setprobconsparams.o setprobconsparams.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/stripgappycols.o stripgappycols.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/stripgappyrows.o stripgappyrows.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/super4.o super4.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/super5.o super5.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/testfb.o testfb.cpp arm-linux-gnueabi-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fopenmp -ffast-math -c -o Linux/testlog.o testlog.cpp In file included from testlog.cpp:2: In function ‘uint64_t GetClockTicks()’, inlined from ‘void cmd_testlog()’ at testlog.cpp:71:26: timing.h:26:9: error: impossible constraint in ‘asm’ 26 | __asm__ __volatile__ ("rdtsc" : "=a" (lo), "=d" (hi)); | ^~~~~~~ In function ‘uint64_t GetClockTicks()’, inlined from ‘void cmd_testlog()’ at testlog.cpp:83:26: timing.h:26:9: error: impossible constraint in ‘asm’ 26 | __asm__ __volatile__ ("rdtsc" : "=a" (lo), "=d" (hi)); | ^~~~~~~ In function ‘uint64_t GetClockTicks()’, inlined from ‘void cmd_testlog()’ at testlog.cpp:87:26: timing.h:26:9: error: impossible constraint in ‘asm’ 26 | __asm__ __volatile__ ("rdtsc" : "=a" (lo), "=d" (hi)); | ^~~~~~~ In function ‘uint64_t GetClockTicks()’, inlined from ‘void cmd_testlog()’ at testlog.cpp:99:26: timing.h:26:9: error: impossible constraint in ‘asm’ 26 | __asm__ __volatile__ ("rdtsc" : "=a" (lo), "=d" (hi)); | ^~~~~~~ In function ‘uint64_t GetClockTicks()’, inlined from ‘void cmd_testlog()’ at testlog.cpp:103:26: timing.h:26:9: error: impossible constraint in ‘asm’ 26 | __asm__ __volatile__ ("rdtsc" : "=a" (lo), "=d" (hi)); | ^~~~~~~ In function ‘uint64_t GetClockTicks()’, inlined from ‘void cmd_testlog()’ at testlog.cpp:116:26: timing.h:26:9: error: impossible constraint in ‘asm’ 26 | __asm__ __volatile__ ("rdtsc" : "=a" (lo), "=d" (hi)); | ^~~~~~~ In function ‘uint64_t GetClockTicks()’, inlined from ‘void cmd_testlog()’ at testlog.cpp:119:26: timing.h:26:9: error: impossible constraint in ‘asm’ 26 | __asm__ __volatile__ ("rdtsc" : "=a" (lo), "=d" (hi)); | ^~~~~~~ In function ‘uint64_t GetClockTicks()’, inlined from ‘void cmd_testlog()’ at testlog.cpp:132:26: timing.h:26:9: error: impossible constraint in ‘asm’ 26 | __asm__ __volatile__ ("rdtsc" : "=a" (lo), "=d" (hi)); | ^~~~~~~ In function ‘uint64_t GetClockTicks()’, inlined from ‘void cmd_testlog()’ at testlog.cpp:135:26: timing.h:26:9: error: impossible constraint in ‘asm’ 26 | __asm__ __volatile__ ("rdtsc" : "=a" (lo), "=d" (hi)); | ^~~~~~~ In function ‘uint64_t GetClockTicks()’, inlined from ‘void cmd_testlog()’ at testlog.cpp:148:27: timing.h:26:9: error: impossible constraint in ‘asm’ 26 | __asm__ __volatile__ ("rdtsc" : "=a" (lo), "=d" (hi)); | ^~~~~~~ make[2]: *** [Makefile:53: Linux/testlog.o] Error 1 make[2]: Leaving directory '/<>/src' dh_auto_build: error: cd src && make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabi-pkg-config CXX=arm-linux-gnueabi-g\+\+ CC=arm-linux-gnueabi-gcc GPP=\$\(CXX\) returned exit code 2 make[1]: *** [debian/rules:9: override_dh_auto_build] Error 25 make[1]: Leaving directory '/<>' make: *** [debian/rules:6: binary-arch] Error 2 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2022-12-27T14:30:21Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 36164 Build-Time: 102 Distribution: unstable Fail-Stage: build Foreign Architectures: armel Host Architecture: armel Install-Time: 9 Job: muscle_1:5.1-1 Machine Architecture: amd64 Package: muscle Package-Time: 126 Source-Version: 1:5.1-1 Space: 36164 Status: attempted Version: 1:5.1-1 -------------------------------------------------------------------------------- Finished at 2022-12-27T14:30:21Z Build needed 00:02:06, 36164k disk space