sbuild (Debian sbuild) 0.85.0 (04 January 2023) on mjolnir.einval.org +==============================================================================+ | ncbi-blast+ 2.16.0+ds-7 (amd64) Sat, 17 May 2025 20:25:08 +0000 | +==============================================================================+ Package: ncbi-blast+ Version: 2.16.0+ds-7 Source Version: 2.16.0+ds-7 Distribution: unstable Machine Architecture: arm64 Host Architecture: amd64 Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Unpacking /home/helmut/.cache/sbuild/unstable-arm64-sbuild.tar.zst to /tmp/tmp.sbuild.NGqLhPA7h0... I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<>' I: NOTICE: Log filtering will replace 'build/ncbi-blast+-zISc9i/resolver-jA54eX' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://mirror.einval.org/debian unstable InRelease [208 kB] Get:2 http://mirror.einval.org/debian unstable/main Sources [10.9 MB] Get:3 http://mirror.einval.org/debian unstable/main arm64 Packages [10.0 MB] Get:4 http://mirror.einval.org/debian unstable/main amd64 Packages [10.1 MB] Fetched 31.3 MB in 7s (4379 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: base-files 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 73.1 kB of archives. After this operation, 0 B of additional disk space will be used. Get:1 http://mirror.einval.org/debian unstable/main arm64 base-files arm64 13.8 [73.1 kB] Fetched 73.1 kB in 0s (2608 kB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12033 files and directories currently installed.) Preparing to unpack .../base-files_13.8_arm64.deb ... Unpacking base-files (13.8) over (13.7) ... Setting up base-files (13.8) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'ncbi-blast+' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/ncbi-blastplus.git Please use: git clone https://salsa.debian.org/med-team/ncbi-blastplus.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 18.5 MB of source archives. Get:1 http://mirror.einval.org/debian unstable/main ncbi-blast+ 2.16.0+ds-7 (dsc) [2533 B] Get:2 http://mirror.einval.org/debian unstable/main ncbi-blast+ 2.16.0+ds-7 (tar) [18.4 MB] Get:3 http://mirror.einval.org/debian unstable/main ncbi-blast+ 2.16.0+ds-7 (diff) [43.2 kB] Fetched 18.5 MB in 0s (62.7 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/ncbi-blast+-zISc9i/ncbi-blast+-2.16.0+ds' with '<>' I: NOTICE: Log filtering will replace 'build/ncbi-blast+-zISc9i' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), autoconf2.69, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-amd64:arm64, libc-dev:amd64, libstdc++-dev:amd64, libboost-test-dev, libbz2-dev, libc-dev-bin, libgnutls28-dev, liblmdb-dev, libmbedtls-dev, libncbi-vdb-dev, libnghttp2-dev, libpcre2-dev, libsqlite3-dev, libuv1-dev, time, zlib1g-dev, procps Filtered Build-Depends: debhelper-compat (= 13), autoconf2.69, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-amd64:arm64, libc-dev:amd64, libstdc++-dev:amd64, libboost-test-dev, libbz2-dev, libc-dev-bin, libgnutls28-dev, liblmdb-dev, libmbedtls-dev, libncbi-vdb-dev, libnghttp2-dev, libpcre2-dev, libsqlite3-dev, libuv1-dev, time, zlib1g-dev, procps dpkg-deb: warning: root directory /<>/sbuild-build-depends-main-dummy has unusual owner or group 998:999 dpkg-deb: hint: you might need to pass --root-owner-group, see for further details dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [957 B] Get:5 copy:/<>/apt_archive ./ Packages [964 B] Fetched 2530 B in 0s (93.2 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf autoconf2.69 automake autopoint autotools-dev binutils-x86-64-linux-gnu bsdextrautils cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu crossbuild-essential-amd64 debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-14-base:amd64 gcc-14-cross-base gcc-14-x86-64-linux-gnu gcc-14-x86-64-linux-gnu-base gcc-x86-64-linux-gnu gettext gettext-base groff-base intltool-debian libaec-dev:amd64 libaec0:amd64 libarchive-zip-perl libasan8:amd64 libasan8-amd64-cross libatomic1:amd64 libatomic1-amd64-cross libboost-test-dev:amd64 libboost-test1.83-dev:amd64 libboost-test1.83.0:amd64 libboost1.83-dev:amd64 libbz2-1.0:amd64 libbz2-dev:amd64 libc6:amd64 libc6-amd64-cross libc6-dev:amd64 libc6-dev-amd64-cross libcrypt-dev:amd64 libcrypt1:amd64 libdebhelper-perl libelf1t64 libevent-2.1-7t64:amd64 libfakeroot libffi8:amd64 libfile-stripnondeterminism-perl libgcc-14-dev:amd64 libgcc-14-dev-amd64-cross libgcc-s1:amd64 libgcc-s1-amd64-cross libgmp-dev:amd64 libgmp10:amd64 libgmpxx4ldbl:amd64 libgnutls-dane0t64:amd64 libgnutls-openssl27t64:amd64 libgnutls28-dev:amd64 libgnutls30t64:amd64 libgomp1:amd64 libgomp1-amd64-cross libhogweed6t64:amd64 libhwasan0:amd64 libhwasan0-amd64-cross libidn2-0:amd64 libidn2-dev:amd64 libitm1:amd64 libitm1-amd64-cross liblmdb-dev:amd64 liblmdb0:amd64 liblsan0:amd64 liblsan0-amd64-cross libmagic-mgc libmagic1t64 libmbedcrypto16:amd64 libmbedtls-dev:amd64 libmbedtls21:amd64 libmbedx509-7:amd64 libncbi-vdb-dev:amd64 libncbi-vdb3:amd64 libncbi-wvdb-dev:amd64 libncbi-wvdb3:amd64 libncursesw6 libnettle8t64:amd64 libnghttp2-14:amd64 libnghttp2-dev:amd64 libp11-kit-dev:amd64 libp11-kit0:amd64 libpcre2-16-0:amd64 libpcre2-32-0:amd64 libpcre2-8-0:amd64 libpcre2-dev:amd64 libpcre2-posix3:amd64 libpipeline1 libpkgconf3 libproc2-0 libquadmath0:amd64 libquadmath0-amd64-cross libsqlite3-0:amd64 libsqlite3-dev:amd64 libssl3t64:amd64 libstdc++-14-dev:amd64 libstdc++-14-dev-amd64-cross libstdc++6:amd64 libstdc++6-amd64-cross libsz2:amd64 libtasn1-6:amd64 libtasn1-6-dev:amd64 libtool libtsan2:amd64 libtsan2-amd64-cross libubsan1:amd64 libubsan1-amd64-cross libuchardet0 libunbound8:amd64 libunistring5 libunistring5:amd64 libuv1-dev:amd64 libuv1t64:amd64 libxml2 libzstd-dev:amd64 libzstd1:amd64 linux-libc-dev-amd64-cross m4 man-db ncbi-vdb-data nettle-dev:amd64 pkgconf:amd64 pkgconf-bin po-debconf procps sensible-utils time zlib1g:amd64 zlib1g-dev:amd64 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-14-locales cpp-14-doc cpp-doc dh-make gcc-14-doc manpages-dev flex bison gdb-x86-64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev gnulib-l10n groff libboost1.83-doc:amd64 libboost-atomic1.83-dev:amd64 libboost-chrono1.83-dev:amd64 libboost-container1.83-dev:amd64 libboost-context1.83-dev:amd64 libboost-contract1.83-dev:amd64 libboost-coroutine1.83-dev:amd64 libboost-date-time1.83-dev:amd64 libboost-exception1.83-dev:amd64 libboost-fiber1.83-dev:amd64 libboost-filesystem1.83-dev:amd64 libboost-graph-parallel1.83-dev:amd64 libboost-graph1.83-dev:amd64 libboost-iostreams1.83-dev:amd64 libboost-json1.83-dev:amd64 libboost-locale1.83-dev:amd64 libboost-log1.83-dev:amd64 libboost-math1.83-dev:amd64 libboost-mpi-python1.83-dev:amd64 libboost-mpi1.83-dev:amd64 libboost-nowide1.83-dev:amd64 libboost-numpy1.83-dev:amd64 libboost-program-options1.83-dev:amd64 libboost-python1.83-dev:amd64 libboost-random1.83-dev:amd64 libboost-regex1.83-dev:amd64 libboost-serialization1.83-dev:amd64 libboost-stacktrace1.83-dev:amd64 libboost-system1.83-dev:amd64 libboost-thread1.83-dev:amd64 libboost-timer1.83-dev:amd64 libboost-type-erasure1.83-dev:amd64 libboost-url1.83-dev:amd64 libboost-wave1.83-dev:amd64 libboost1.83-tools-dev:amd64 libmpfrc++-dev:amd64 libntl-dev:amd64 glibc-doc:amd64 libc-l10n:amd64 locales:amd64 libnss-nis:amd64 libnss-nisplus:amd64 manpages-dev:amd64 gmp-doc:amd64 libgmp10-doc:amd64 libmpfr-dev:amd64 dns-root-data:amd64 gnutls-bin:amd64 gnutls-doc:amd64 libmbedtls-doc:amd64 libnghttp2-doc:amd64 p11-kit-doc:amd64 sqlite3-doc:amd64 libstdc++-14-doc:amd64 libtool-doc gfortran | fortran95-compiler gcj-jdk libuv1-doc:amd64 m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx bzip2-doc:amd64 libarchive-cpio-perl lmdb-doc:amd64 libgpm2 libtasn1-doc:amd64 libltdl-dev python3:any libmail-sendmail-perl psmisc linux-sysctl-defaults The following NEW packages will be installed: autoconf autoconf2.69 automake autopoint autotools-dev binutils-x86-64-linux-gnu bsdextrautils cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu crossbuild-essential-amd64 debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-14-base:amd64 gcc-14-cross-base gcc-14-x86-64-linux-gnu gcc-14-x86-64-linux-gnu-base gcc-x86-64-linux-gnu gettext gettext-base groff-base intltool-debian libaec-dev:amd64 libaec0:amd64 libarchive-zip-perl libasan8:amd64 libasan8-amd64-cross libatomic1:amd64 libatomic1-amd64-cross libboost-test-dev:amd64 libboost-test1.83-dev:amd64 libboost-test1.83.0:amd64 libboost1.83-dev:amd64 libbz2-1.0:amd64 libbz2-dev:amd64 libc6:amd64 libc6-amd64-cross libc6-dev:amd64 libc6-dev-amd64-cross libcrypt-dev:amd64 libcrypt1:amd64 libdebhelper-perl libelf1t64 libevent-2.1-7t64:amd64 libfakeroot libffi8:amd64 libfile-stripnondeterminism-perl libgcc-14-dev:amd64 libgcc-14-dev-amd64-cross libgcc-s1:amd64 libgcc-s1-amd64-cross libgmp-dev:amd64 libgmp10:amd64 libgmpxx4ldbl:amd64 libgnutls-dane0t64:amd64 libgnutls-openssl27t64:amd64 libgnutls28-dev:amd64 libgnutls30t64:amd64 libgomp1:amd64 libgomp1-amd64-cross libhogweed6t64:amd64 libhwasan0:amd64 libhwasan0-amd64-cross libidn2-0:amd64 libidn2-dev:amd64 libitm1:amd64 libitm1-amd64-cross liblmdb-dev:amd64 liblmdb0:amd64 liblsan0:amd64 liblsan0-amd64-cross libmagic-mgc libmagic1t64 libmbedcrypto16:amd64 libmbedtls-dev:amd64 libmbedtls21:amd64 libmbedx509-7:amd64 libncbi-vdb-dev:amd64 libncbi-vdb3:amd64 libncbi-wvdb-dev:amd64 libncbi-wvdb3:amd64 libncursesw6 libnettle8t64:amd64 libnghttp2-14:amd64 libnghttp2-dev:amd64 libp11-kit-dev:amd64 libp11-kit0:amd64 libpcre2-16-0:amd64 libpcre2-32-0:amd64 libpcre2-8-0:amd64 libpcre2-dev:amd64 libpcre2-posix3:amd64 libpipeline1 libpkgconf3 libproc2-0 libquadmath0:amd64 libquadmath0-amd64-cross libsqlite3-0:amd64 libsqlite3-dev:amd64 libssl3t64:amd64 libstdc++-14-dev:amd64 libstdc++-14-dev-amd64-cross libstdc++6:amd64 libstdc++6-amd64-cross libsz2:amd64 libtasn1-6:amd64 libtasn1-6-dev:amd64 libtool libtsan2:amd64 libtsan2-amd64-cross libubsan1:amd64 libubsan1-amd64-cross libuchardet0 libunbound8:amd64 libunistring5 libunistring5:amd64 libuv1-dev:amd64 libuv1t64:amd64 libxml2 libzstd-dev:amd64 libzstd1:amd64 linux-libc-dev-amd64-cross m4 man-db ncbi-vdb-data nettle-dev:amd64 pkgconf:amd64 pkgconf-bin po-debconf procps sbuild-build-depends-main-dummy:amd64 sensible-utils time zlib1g:amd64 zlib1g-dev:amd64 0 upgraded, 140 newly installed, 0 to remove and 0 not upgraded. Need to get 134 MB of archives. After this operation, 654 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1012 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 libncursesw6 arm64 6.5+20250216-2 [124 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-8 [63.0 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 procps arm64 2:4.0.4-8 [873 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 sensible-utils all 0.0.25 [25.0 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 file arm64 1:5.46-5 [43.7 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 gettext-base arm64 0.23.1-2 [241 kB] Get:10 http://mirror.einval.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get:11 http://mirror.einval.org/debian unstable/main arm64 groff-base arm64 1.23.0-8 [1131 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 bsdextrautils arm64 2.41-5 [93.8 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 m4 arm64 1.4.19-8 [285 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 autoconf all 2.72-3.1 [494 kB] Get:17 http://mirror.einval.org/debian unstable/main arm64 autoconf2.69 all 2.69-3.1 [291 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 automake all 1:1.17-4 [862 kB] Get:20 http://mirror.einval.org/debian unstable/main arm64 autopoint all 0.23.1-2 [770 kB] Get:21 http://mirror.einval.org/debian unstable/main arm64 gcc-14-x86-64-linux-gnu-base arm64 14.2.0-19cross1 [49.6 kB] Get:22 http://mirror.einval.org/debian unstable/main arm64 cpp-14-x86-64-linux-gnu arm64 14.2.0-19cross1 [10.4 MB] Get:23 http://mirror.einval.org/debian unstable/main arm64 cpp-x86-64-linux-gnu arm64 4:14.2.0-1 [4852 B] Get:24 http://mirror.einval.org/debian unstable/main arm64 binutils-x86-64-linux-gnu arm64 2.44-3 [1483 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 gcc-14-cross-base all 14.2.0-19cross1 [44.9 kB] Get:26 http://mirror.einval.org/debian unstable/main arm64 libgcc-s1-amd64-cross all 14.2.0-19cross1 [72.8 kB] Get:27 http://mirror.einval.org/debian unstable/main arm64 libgomp1-amd64-cross all 14.2.0-19cross1 [129 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 libitm1-amd64-cross all 14.2.0-19cross1 [25.4 kB] Get:29 http://mirror.einval.org/debian unstable/main arm64 libatomic1-amd64-cross all 14.2.0-19cross1 [8972 B] Get:30 http://mirror.einval.org/debian unstable/main arm64 libasan8-amd64-cross all 14.2.0-19cross1 [2713 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 liblsan0-amd64-cross all 14.2.0-19cross1 [1203 kB] Get:32 http://mirror.einval.org/debian unstable/main arm64 libtsan2-amd64-cross all 14.2.0-19cross1 [2448 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 libc6-amd64-cross all 2.41-6cross2 [1558 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 libstdc++6-amd64-cross all 14.2.0-19cross1 [665 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 libubsan1-amd64-cross all 14.2.0-19cross1 [1073 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 libhwasan0-amd64-cross all 14.2.0-19cross1 [1484 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libquadmath0-amd64-cross all 14.2.0-19cross1 [145 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 libgcc-14-dev-amd64-cross all 14.2.0-19cross1 [2665 kB] Get:39 http://mirror.einval.org/debian unstable/main arm64 gcc-14-x86-64-linux-gnu arm64 14.2.0-19cross1 [20.0 MB] Get:40 http://mirror.einval.org/debian unstable/main arm64 gcc-x86-64-linux-gnu arm64 4:14.2.0-1 [1448 B] Get:41 http://mirror.einval.org/debian unstable/main arm64 linux-libc-dev-amd64-cross all 6.12.17-1cross2 [2369 kB] Get:42 http://mirror.einval.org/debian unstable/main arm64 libc6-dev-amd64-cross all 2.41-6cross2 [1987 kB] Get:43 http://mirror.einval.org/debian unstable/main arm64 libstdc++-14-dev-amd64-cross all 14.2.0-19cross1 [2354 kB] Get:44 http://mirror.einval.org/debian unstable/main arm64 g++-14-x86-64-linux-gnu arm64 14.2.0-19cross1 [11.2 MB] Get:45 http://mirror.einval.org/debian unstable/main arm64 g++-x86-64-linux-gnu arm64 4:14.2.0-1 [1204 B] Get:46 http://mirror.einval.org/debian unstable/main arm64 crossbuild-essential-amd64 all 12.12 [3552 B] Get:47 http://mirror.einval.org/debian unstable/main arm64 libdebhelper-perl all 13.24.2 [90.9 kB] Get:48 http://mirror.einval.org/debian unstable/main arm64 libtool all 2.5.4-4 [539 kB] Get:49 http://mirror.einval.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get:50 http://mirror.einval.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get:51 http://mirror.einval.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get:53 http://mirror.einval.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get:54 http://mirror.einval.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-1 [629 kB] Get:57 http://mirror.einval.org/debian unstable/main arm64 gettext arm64 0.23.1-2 [1611 kB] Get:58 http://mirror.einval.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 debhelper all 13.24.2 [919 kB] Get:61 http://mirror.einval.org/debian unstable/main arm64 libfakeroot arm64 1.37.1.2-1 [29.7 kB] Get:62 http://mirror.einval.org/debian unstable/main arm64 fakeroot arm64 1.37.1.2-1 [75.4 kB] Get:63 http://mirror.einval.org/debian unstable/main amd64 gcc-14-base amd64 14.2.0-19 [49.4 kB] Get:64 http://mirror.einval.org/debian unstable/main amd64 libgcc-s1 amd64 14.2.0-19 [72.8 kB] Get:65 http://mirror.einval.org/debian unstable/main amd64 libc6 amd64 2.41-7 [2847 kB] Get:66 http://mirror.einval.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB] Get:67 http://mirror.einval.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B] Get:68 http://mirror.einval.org/debian unstable/main amd64 libaec-dev amd64 1.1.3-1+b1 [21.5 kB] Get:69 http://mirror.einval.org/debian unstable/main amd64 libasan8 amd64 14.2.0-19 [2725 kB] Get:70 http://mirror.einval.org/debian unstable/main amd64 libatomic1 amd64 14.2.0-19 [9308 B] Get:71 http://mirror.einval.org/debian unstable/main amd64 libgomp1 amd64 14.2.0-19 [137 kB] Get:72 http://mirror.einval.org/debian unstable/main amd64 libitm1 amd64 14.2.0-19 [26.0 kB] Get:73 http://mirror.einval.org/debian unstable/main amd64 liblsan0 amd64 14.2.0-19 [1204 kB] Get:74 http://mirror.einval.org/debian unstable/main amd64 libtsan2 amd64 14.2.0-19 [2460 kB] Get:75 http://mirror.einval.org/debian unstable/main amd64 libstdc++6 amd64 14.2.0-19 [714 kB] Get:76 http://mirror.einval.org/debian unstable/main amd64 libubsan1 amd64 14.2.0-19 [1074 kB] Get:77 http://mirror.einval.org/debian unstable/main amd64 libhwasan0 amd64 14.2.0-19 [1488 kB] Get:78 http://mirror.einval.org/debian unstable/main amd64 libquadmath0 amd64 14.2.0-19 [145 kB] Get:79 http://mirror.einval.org/debian unstable/main amd64 libgcc-14-dev amd64 14.2.0-19 [2672 kB] Get:80 http://mirror.einval.org/debian unstable/main amd64 libcrypt1 amd64 1:4.4.38-1 [90.1 kB] Get:81 http://mirror.einval.org/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.38-1 [119 kB] Get:82 http://mirror.einval.org/debian unstable/main amd64 libc6-dev amd64 2.41-7 [1992 kB] Get:83 http://mirror.einval.org/debian unstable/main amd64 libstdc++-14-dev amd64 14.2.0-19 [2376 kB] Get:84 http://mirror.einval.org/debian unstable/main amd64 libboost1.83-dev amd64 1.83.0-4.2 [10.6 MB] Get:85 http://mirror.einval.org/debian unstable/main amd64 libboost-test1.83.0 amd64 1.83.0-4.2 [471 kB] Get:86 http://mirror.einval.org/debian unstable/main amd64 libboost-test1.83-dev amd64 1.83.0-4.2 [541 kB] Get:87 http://mirror.einval.org/debian unstable/main amd64 libboost-test-dev amd64 1.83.0.2+b2 [3628 B] Get:88 http://mirror.einval.org/debian unstable/main amd64 libbz2-1.0 amd64 1.0.8-6 [37.9 kB] Get:89 http://mirror.einval.org/debian unstable/main amd64 libbz2-dev amd64 1.0.8-6 [31.4 kB] Get:90 http://mirror.einval.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10+b1 [182 kB] Get:91 http://mirror.einval.org/debian unstable/main amd64 libffi8 amd64 3.4.8-2 [24.1 kB] Get:92 http://mirror.einval.org/debian unstable/main amd64 libgmp10 amd64 2:6.3.0+dfsg-3 [560 kB] Get:93 http://mirror.einval.org/debian unstable/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-3 [329 kB] Get:94 http://mirror.einval.org/debian unstable/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-3 [642 kB] Get:95 http://mirror.einval.org/debian unstable/main amd64 libnettle8t64 amd64 3.10.1-1 [305 kB] Get:96 http://mirror.einval.org/debian unstable/main amd64 libhogweed6t64 amd64 3.10.1-1 [335 kB] Get:97 http://mirror.einval.org/debian unstable/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get:98 http://mirror.einval.org/debian unstable/main amd64 libidn2-0 amd64 2.3.8-2 [109 kB] Get:99 http://mirror.einval.org/debian unstable/main amd64 libp11-kit0 amd64 0.25.5-3 [425 kB] Get:100 http://mirror.einval.org/debian unstable/main amd64 libtasn1-6 amd64 4.20.0-2 [49.9 kB] Get:101 http://mirror.einval.org/debian unstable/main amd64 libgnutls30t64 amd64 3.8.9-2 [1464 kB] Get:102 http://mirror.einval.org/debian unstable/main amd64 libzstd1 amd64 1.5.7+dfsg-1 [304 kB] Get:103 http://mirror.einval.org/debian unstable/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.1-1+b1 [88.9 kB] Get:104 http://mirror.einval.org/debian unstable/main amd64 libssl3t64 amd64 3.5.0-1 [2432 kB] Get:105 http://mirror.einval.org/debian unstable/main amd64 libunbound8 amd64 1.22.0-1+b1 [598 kB] Get:106 http://mirror.einval.org/debian unstable/main amd64 libgnutls-dane0t64 amd64 3.8.9-2 [455 kB] Get:107 http://mirror.einval.org/debian unstable/main amd64 libgnutls-openssl27t64 amd64 3.8.9-2 [455 kB] Get:108 http://mirror.einval.org/debian unstable/main amd64 libidn2-dev amd64 2.3.8-2 [103 kB] Get:109 http://mirror.einval.org/debian unstable/main amd64 libp11-kit-dev amd64 0.25.5-3 [208 kB] Get:110 http://mirror.einval.org/debian unstable/main amd64 libtasn1-6-dev amd64 4.20.0-2 [99.2 kB] Get:111 http://mirror.einval.org/debian unstable/main amd64 nettle-dev amd64 3.10.1-1 [1318 kB] Get:112 http://mirror.einval.org/debian unstable/main amd64 libgnutls28-dev amd64 3.8.9-2 [1401 kB] Get:113 http://mirror.einval.org/debian unstable/main amd64 liblmdb0 amd64 0.9.31-1+b2 [45.2 kB] Get:114 http://mirror.einval.org/debian unstable/main amd64 liblmdb-dev amd64 0.9.31-1+b2 [61.5 kB] Get:115 http://mirror.einval.org/debian unstable/main amd64 libmbedcrypto16 amd64 3.6.3-1 [357 kB] Get:116 http://mirror.einval.org/debian unstable/main amd64 libmbedx509-7 amd64 3.6.3-1 [149 kB] Get:117 http://mirror.einval.org/debian unstable/main amd64 libmbedtls21 amd64 3.6.3-1 [236 kB] Get:118 http://mirror.einval.org/debian unstable/main amd64 libmbedtls-dev amd64 3.6.3-1 [827 kB] Get:119 http://mirror.einval.org/debian unstable/main amd64 libzstd-dev amd64 1.5.7+dfsg-1 [371 kB] Get:120 http://mirror.einval.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get:121 http://mirror.einval.org/debian unstable/main arm64 ncbi-vdb-data all 3.2.1+dfsg-2 [88.5 kB] Get:122 http://mirror.einval.org/debian unstable/main amd64 libncbi-vdb3 amd64 3.2.1+dfsg-2 [1164 kB] Get:123 http://mirror.einval.org/debian unstable/main amd64 libncbi-wvdb3 amd64 3.2.1+dfsg-2 [1167 kB] Get:124 http://mirror.einval.org/debian unstable/main amd64 libncbi-wvdb-dev amd64 3.2.1+dfsg-2 [1286 kB] Get:125 http://mirror.einval.org/debian unstable/main amd64 libncbi-vdb-dev amd64 3.2.1+dfsg-2 [1588 kB] Get:126 http://mirror.einval.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1.1 [76.0 kB] Get:127 http://mirror.einval.org/debian unstable/main arm64 libpkgconf3 arm64 1.8.1-4 [35.3 kB] Get:128 http://mirror.einval.org/debian unstable/main arm64 pkgconf-bin arm64 1.8.1-4 [29.6 kB] Get:129 http://mirror.einval.org/debian unstable/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] Get:130 http://mirror.einval.org/debian unstable/main amd64 libnghttp2-dev amd64 1.64.0-1.1 [116 kB] Get:131 http://mirror.einval.org/debian unstable/main amd64 libpcre2-16-0 amd64 10.45-1 [281 kB] Get:132 http://mirror.einval.org/debian unstable/main amd64 libpcre2-32-0 amd64 10.45-1 [268 kB] Get:133 http://mirror.einval.org/debian unstable/main amd64 libpcre2-8-0 amd64 10.45-1 [298 kB] Get:134 http://mirror.einval.org/debian unstable/main amd64 libpcre2-posix3 amd64 10.45-1 [63.5 kB] Get:135 http://mirror.einval.org/debian unstable/main amd64 libpcre2-dev amd64 10.45-1 [853 kB] Get:136 http://mirror.einval.org/debian unstable/main amd64 libsqlite3-0 amd64 3.46.1-4 [913 kB] Get:137 http://mirror.einval.org/debian unstable/main amd64 libsqlite3-dev amd64 3.46.1-4 [1107 kB] Get:138 http://mirror.einval.org/debian unstable/main amd64 libuv1t64 amd64 1.50.0-2 [154 kB] Get:139 http://mirror.einval.org/debian unstable/main amd64 libuv1-dev amd64 1.50.0-2 [189 kB] Get:140 http://mirror.einval.org/debian unstable/main arm64 time arm64 1.9-0.2+b1 [48.1 kB] Preconfiguring packages ... Fetched 134 MB in 1s (91.2 MB/s) Selecting previously unselected package libncursesw6:arm64. (Reading database ... 12033 files and directories currently installed.) Preparing to unpack .../000-libncursesw6_6.5+20250216-2_arm64.deb ... Unpacking libncursesw6:arm64 (6.5+20250216-2) ... Selecting previously unselected package libproc2-0:arm64. Preparing to unpack .../001-libproc2-0_2%3a4.0.4-8_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.4-8) ... Selecting previously unselected package procps. Preparing to unpack .../002-procps_2%3a4.0.4-8_arm64.deb ... Unpacking procps (2:4.0.4-8) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../003-sensible-utils_0.0.25_all.deb ... Unpacking sensible-utils (0.0.25) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.46-5_arm64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:arm64. 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Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../012-man-db_2.13.1-1_arm64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../013-m4_1.4.19-8_arm64.deb ... Unpacking m4 (1.4.19-8) ... Selecting previously unselected package autoconf. Preparing to unpack .../014-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autoconf2.69. Preparing to unpack .../015-autoconf2.69_2.69-3.1_all.deb ... Unpacking autoconf2.69 (2.69-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../016-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../017-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../018-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package gcc-14-x86-64-linux-gnu-base:arm64. Preparing to unpack .../019-gcc-14-x86-64-linux-gnu-base_14.2.0-19cross1_arm64.deb ... Unpacking gcc-14-x86-64-linux-gnu-base:arm64 (14.2.0-19cross1) ... Selecting previously unselected package cpp-14-x86-64-linux-gnu. Preparing to unpack .../020-cpp-14-x86-64-linux-gnu_14.2.0-19cross1_arm64.deb ... Unpacking cpp-14-x86-64-linux-gnu (14.2.0-19cross1) ... Selecting previously unselected package cpp-x86-64-linux-gnu. Preparing to unpack .../021-cpp-x86-64-linux-gnu_4%3a14.2.0-1_arm64.deb ... Unpacking cpp-x86-64-linux-gnu (4:14.2.0-1) ... Selecting previously unselected package binutils-x86-64-linux-gnu. Preparing to unpack .../022-binutils-x86-64-linux-gnu_2.44-3_arm64.deb ... Unpacking binutils-x86-64-linux-gnu (2.44-3) ... Selecting previously unselected package gcc-14-cross-base. Preparing to unpack .../023-gcc-14-cross-base_14.2.0-19cross1_all.deb ... Unpacking gcc-14-cross-base (14.2.0-19cross1) ... Selecting previously unselected package libgcc-s1-amd64-cross. Preparing to unpack .../024-libgcc-s1-amd64-cross_14.2.0-19cross1_all.deb ... Unpacking libgcc-s1-amd64-cross (14.2.0-19cross1) ... Selecting previously unselected package libgomp1-amd64-cross. Preparing to unpack .../025-libgomp1-amd64-cross_14.2.0-19cross1_all.deb ... Unpacking libgomp1-amd64-cross (14.2.0-19cross1) ... Selecting previously unselected package libitm1-amd64-cross. Preparing to unpack .../026-libitm1-amd64-cross_14.2.0-19cross1_all.deb ... Unpacking libitm1-amd64-cross (14.2.0-19cross1) ... Selecting previously unselected package libatomic1-amd64-cross. Preparing to unpack .../027-libatomic1-amd64-cross_14.2.0-19cross1_all.deb ... Unpacking libatomic1-amd64-cross (14.2.0-19cross1) ... Selecting previously unselected package libasan8-amd64-cross. Preparing to unpack .../028-libasan8-amd64-cross_14.2.0-19cross1_all.deb ... Unpacking libasan8-amd64-cross (14.2.0-19cross1) ... Selecting previously unselected package liblsan0-amd64-cross. Preparing to unpack .../029-liblsan0-amd64-cross_14.2.0-19cross1_all.deb ... Unpacking liblsan0-amd64-cross (14.2.0-19cross1) ... Selecting previously unselected package libtsan2-amd64-cross. Preparing to unpack .../030-libtsan2-amd64-cross_14.2.0-19cross1_all.deb ... Unpacking libtsan2-amd64-cross (14.2.0-19cross1) ... Selecting previously unselected package libc6-amd64-cross. Preparing to unpack .../031-libc6-amd64-cross_2.41-6cross2_all.deb ... Unpacking libc6-amd64-cross (2.41-6cross2) ... Selecting previously unselected package libstdc++6-amd64-cross. Preparing to unpack .../032-libstdc++6-amd64-cross_14.2.0-19cross1_all.deb ... Unpacking libstdc++6-amd64-cross (14.2.0-19cross1) ... Selecting previously unselected package libubsan1-amd64-cross. Preparing to unpack .../033-libubsan1-amd64-cross_14.2.0-19cross1_all.deb ... Unpacking libubsan1-amd64-cross (14.2.0-19cross1) ... Selecting previously unselected package libhwasan0-amd64-cross. Preparing to unpack .../034-libhwasan0-amd64-cross_14.2.0-19cross1_all.deb ... Unpacking libhwasan0-amd64-cross (14.2.0-19cross1) ... Selecting previously unselected package libquadmath0-amd64-cross. Preparing to unpack .../035-libquadmath0-amd64-cross_14.2.0-19cross1_all.deb ... Unpacking libquadmath0-amd64-cross (14.2.0-19cross1) ... Selecting previously unselected package libgcc-14-dev-amd64-cross. Preparing to unpack .../036-libgcc-14-dev-amd64-cross_14.2.0-19cross1_all.deb ... Unpacking libgcc-14-dev-amd64-cross (14.2.0-19cross1) ... Selecting previously unselected package gcc-14-x86-64-linux-gnu. Preparing to unpack .../037-gcc-14-x86-64-linux-gnu_14.2.0-19cross1_arm64.deb ... Unpacking gcc-14-x86-64-linux-gnu (14.2.0-19cross1) ... Selecting previously unselected package gcc-x86-64-linux-gnu. Preparing to unpack .../038-gcc-x86-64-linux-gnu_4%3a14.2.0-1_arm64.deb ... Unpacking gcc-x86-64-linux-gnu (4:14.2.0-1) ... Selecting previously unselected package linux-libc-dev-amd64-cross. Preparing to unpack .../039-linux-libc-dev-amd64-cross_6.12.17-1cross2_all.deb ... Unpacking linux-libc-dev-amd64-cross (6.12.17-1cross2) ... Selecting previously unselected package libc6-dev-amd64-cross. Preparing to unpack .../040-libc6-dev-amd64-cross_2.41-6cross2_all.deb ... Unpacking libc6-dev-amd64-cross (2.41-6cross2) ... Selecting previously unselected package libstdc++-14-dev-amd64-cross. Preparing to unpack .../041-libstdc++-14-dev-amd64-cross_14.2.0-19cross1_all.deb ... Unpacking libstdc++-14-dev-amd64-cross (14.2.0-19cross1) ... Selecting previously unselected package g++-14-x86-64-linux-gnu. Preparing to unpack .../042-g++-14-x86-64-linux-gnu_14.2.0-19cross1_arm64.deb ... Unpacking g++-14-x86-64-linux-gnu (14.2.0-19cross1) ... Selecting previously unselected package g++-x86-64-linux-gnu. Preparing to unpack .../043-g++-x86-64-linux-gnu_4%3a14.2.0-1_arm64.deb ... Unpacking g++-x86-64-linux-gnu (4:14.2.0-1) ... Selecting previously unselected package crossbuild-essential-amd64. Preparing to unpack .../044-crossbuild-essential-amd64_12.12_all.deb ... Unpacking crossbuild-essential-amd64 (12.12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../045-libdebhelper-perl_13.24.2_all.deb ... Unpacking libdebhelper-perl (13.24.2) ... Selecting previously unselected package libtool. Preparing to unpack .../046-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../047-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../048-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../049-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../050-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../051-libelf1t64_0.192-4_arm64.deb ... Unpacking libelf1t64:arm64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../052-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../053-libunistring5_1.3-2_arm64.deb ... Unpacking libunistring5:arm64 (1.3-2) ... 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Setting up libstdc++-14-dev-amd64-cross (14.2.0-19cross1) ... Setting up gcc-x86-64-linux-gnu (4:14.2.0-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up g++-14-x86-64-linux-gnu (14.2.0-19cross1) ... Setting up g++-x86-64-linux-gnu (4:14.2.0-1) ... Setting up debhelper (13.24.2) ... Setting up crossbuild-essential-amd64 (12.12) ... Setting up libgcc-s1:amd64 (14.2.0-19) ... Setting up libc6:amd64 (2.41-7) ... Setting up libffi8:amd64 (3.4.8-2) ... Setting up libhwasan0:amd64 (14.2.0-19) ... Setting up libasan8:amd64 (14.2.0-19) ... Setting up libtasn1-6:amd64 (4.20.0-2) ... Setting up libmbedcrypto16:amd64 (3.6.3-1) ... Setting up libtsan2:amd64 (14.2.0-19) ... Setting up libbz2-1.0:amd64 (1.0.8-6) ... Setting up libtasn1-6-dev:amd64 (4.20.0-2) ... Setting up libstdc++6:amd64 (14.2.0-19) ... Setting up liblsan0:amd64 (14.2.0-19) ... Setting up libitm1:amd64 (14.2.0-19) ... 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Setting up liblmdb-dev:amd64 (0.9.31-1+b2) ... Setting up libboost-test1.83.0:amd64 (1.83.0-4.2) ... Setting up libmbedtls21:amd64 (3.6.3-1) ... Setting up libubsan1:amd64 (14.2.0-19) ... Setting up libpcre2-posix3:amd64 (10.45-1) ... Setting up libhogweed6t64:amd64 (3.10.1-1) ... Setting up libcrypt-dev:amd64 (1:4.4.38-1) ... Setting up libc6-dev:amd64 (2.41-7) ... Setting up libgcc-14-dev:amd64 (14.2.0-19) ... Setting up libstdc++-14-dev:amd64 (14.2.0-19) ... Setting up libp11-kit-dev:amd64 (0.25.5-3) ... Setting up libsz2:amd64 (1.1.3-1+b1) ... Setting up libbz2-dev:amd64 (1.0.8-6) ... Setting up libuv1-dev:amd64 (1.50.0-2) ... Setting up libnghttp2-dev:amd64 (1.64.0-1.1) ... Setting up libboost1.83-dev:amd64 (1.83.0-4.2) ... Setting up libpcre2-dev:amd64 (10.45-1) ... Setting up libssl3t64:amd64 (3.5.0-1) ... Setting up libaec-dev:amd64 (1.1.3-1+b1) ... Setting up libncbi-vdb3:amd64 (3.2.1+dfsg-2) ... Setting up libboost-test1.83-dev:amd64 (1.83.0-4.2) ... Setting up libidn2-0:amd64 (2.3.8-2) ... Setting up libmbedtls-dev:amd64 (3.6.3-1) ... Setting up libboost-test-dev:amd64 (1.83.0.2+b2) ... Setting up libunbound8:amd64 (1.22.0-1+b1) ... Setting up libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-3) ... Setting up libsqlite3-dev:amd64 (3.46.1-4) ... Setting up libncbi-wvdb3:amd64 (3.2.1+dfsg-2) ... Setting up libidn2-dev:amd64 (2.3.8-2) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libncbi-wvdb-dev:amd64 (3.2.1+dfsg-2) ... Setting up libgnutls30t64:amd64 (3.8.9-2) ... Setting up libgnutls-openssl27t64:amd64 (3.8.9-2) ... Setting up libgmp-dev:amd64 (2:6.3.0+dfsg-3) ... Setting up nettle-dev:amd64 (3.10.1-1) ... Setting up libgnutls-dane0t64:amd64 (3.8.9-2) ... Setting up libncbi-vdb-dev:amd64 (3.2.1+dfsg-2) ... Setting up libgnutls28-dev:amd64 (3.8.9-2) ... Setting up sbuild-build-depends-main-dummy:amd64 (0.invalid.0) ... Processing triggers for base-files (13.8) ... Processing triggers for libc-bin (2.41-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-28-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) arm64 (aarch64) Toolchain package versions: binutils_2.44-3 dpkg-dev_1.22.18 g++-14_14.2.0-19 gcc-14_14.2.0-19 libc6-dev_2.41-7 libstdc++-14-dev_14.2.0-19 libstdc++-14-dev-amd64-cross_14.2.0-19cross1 libstdc++6_14.2.0-19 libstdc++6-amd64-cross_14.2.0-19cross1 linux-libc-dev_6.12.27-1 Package versions: apt_3.0.1 apt-utils_3.0.1 autoconf_2.72-3.1 autoconf2.69_2.69-3.1 automake_1:1.17-4 autopoint_0.23.1-2 autotools-dev_20240727.1 base-files_13.8 base-passwd_3.6.7 bash_5.2.37-2+b1 binutils_2.44-3 binutils-aarch64-linux-gnu_2.44-3 binutils-common_2.44-3 binutils-x86-64-linux-gnu_2.44-3 bsdextrautils_2.41-5 bsdutils_1:2.41-5 build-essential_12.12 bzip2_1.0.8-6 coreutils_9.7-2 cpp_4:14.2.0-1 cpp-14_14.2.0-19 cpp-14-aarch64-linux-gnu_14.2.0-19 cpp-14-x86-64-linux-gnu_14.2.0-19cross1 cpp-aarch64-linux-gnu_4:14.2.0-1 cpp-x86-64-linux-gnu_4:14.2.0-1 crossbuild-essential-amd64_12.12 dash_0.5.12-12 debconf_1.5.91 debhelper_13.24.2 debian-archive-keyring_2025.1 debianutils_5.22 dh-autoreconf_20 dh-strip-nondeterminism_1.14.1-2 diffutils_1:3.10-4 dpkg_1.22.18 dpkg-dev_1.22.18 dwz_0.15-1+b1 fakeroot_1.37.1.2-1 file_1:5.46-5 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.2.0-19 g++-14-aarch64-linux-gnu_14.2.0-19 g++-14-x86-64-linux-gnu_14.2.0-19cross1 g++-aarch64-linux-gnu_4:14.2.0-1 g++-x86-64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-19 gcc-14-aarch64-linux-gnu_14.2.0-19 gcc-14-base_14.2.0-19 gcc-14-cross-base_14.2.0-19cross1 gcc-14-x86-64-linux-gnu_14.2.0-19cross1 gcc-14-x86-64-linux-gnu-base_14.2.0-19cross1 gcc-aarch64-linux-gnu_4:14.2.0-1 gcc-x86-64-linux-gnu_4:14.2.0-1 gettext_0.23.1-2 gettext-base_0.23.1-2 grep_3.11-4+b1 groff-base_1.23.0-8 gzip_1.13-1 hostname_3.25 init-system-helpers_1.68 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2+b1 libaec-dev_1.1.3-1+b1 libaec0_1.1.3-1+b1 libapt-pkg7.0_3.0.1 libarchive-zip-perl_1.68-1 libasan8_14.2.0-19 libasan8-amd64-cross_14.2.0-19cross1 libatomic1_14.2.0-19 libatomic1-amd64-cross_14.2.0-19cross1 libattr1_1:2.5.2-3 libaudit-common_1:4.0.2-2 libaudit1_1:4.0.2-2+b2 libbinutils_2.44-3 libblkid1_2.41-5 libboost-test-dev_1.83.0.2+b2 libboost-test1.83-dev_1.83.0-4.2 libboost-test1.83.0_1.83.0-4.2 libboost1.83-dev_1.83.0-4.2 libbz2-1.0_1.0.8-6 libbz2-dev_1.0.8-6 libc-bin_2.41-7 libc-dev-bin_2.41-7 libc6_2.41-7 libc6-amd64-cross_2.41-6cross2 libc6-dev_2.41-7 libc6-dev-amd64-cross_2.41-6cross2 libcap-ng0_0.8.5-4+b1 libcap2_1:2.75-7 libcc1-0_14.2.0-19 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.44-3 libctf0_2.44-3 libdb5.3t64_5.3.28+dfsg2-9 libdebconfclient0_0.278 libdebhelper-perl_13.24.2 libdpkg-perl_1.22.18 libelf1t64_0.192-4 libevent-2.1-7t64_2.1.12-stable-10+b1 libfakeroot_1.37.1.2-1 libffi8_3.4.8-2 libfile-stripnondeterminism-perl_1.14.1-2 libgcc-14-dev_14.2.0-19 libgcc-14-dev-amd64-cross_14.2.0-19cross1 libgcc-s1_14.2.0-19 libgcc-s1-amd64-cross_14.2.0-19cross1 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgmp-dev_2:6.3.0+dfsg-3 libgmp10_2:6.3.0+dfsg-3 libgmpxx4ldbl_2:6.3.0+dfsg-3 libgnutls-dane0t64_3.8.9-2 libgnutls-openssl27t64_3.8.9-2 libgnutls28-dev_3.8.9-2 libgnutls30t64_3.8.9-2 libgomp1_14.2.0-19 libgomp1-amd64-cross_14.2.0-19cross1 libgprofng0_2.44-3 libhogweed6t64_3.10.1-1 libhwasan0_14.2.0-19 libhwasan0-amd64-cross_14.2.0-19cross1 libidn2-0_2.3.8-2 libidn2-dev_2.3.8-2 libisl23_0.27-1 libitm1_14.2.0-19 libitm1-amd64-cross_14.2.0-19cross1 libjansson4_2.14-2+b3 liblastlog2-2_2.41-5 liblmdb-dev_0.9.31-1+b2 liblmdb0_0.9.31-1+b2 liblsan0_14.2.0-19 liblsan0-amd64-cross_14.2.0-19cross1 liblz4-1_1.10.0-4 liblzma5_5.8.1-1 libmagic-mgc_1:5.46-5 libmagic1t64_1:5.46-5 libmbedcrypto16_3.6.3-1 libmbedtls-dev_3.6.3-1 libmbedtls21_3.6.3-1 libmbedx509-7_3.6.3-1 libmd0_1.1.0-2+b1 libmount1_2.41-5 libmpc3_1.3.1-1+b3 libmpfr6_4.2.2-1 libncbi-vdb-dev_3.2.1+dfsg-2 libncbi-vdb3_3.2.1+dfsg-2 libncbi-wvdb-dev_3.2.1+dfsg-2 libncbi-wvdb3_3.2.1+dfsg-2 libncursesw6_6.5+20250216-2 libnettle8t64_3.10.1-1 libnghttp2-14_1.64.0-1.1 libnghttp2-dev_1.64.0-1.1 libp11-kit-dev_0.25.5-3 libp11-kit0_0.25.5-3 libpam-modules_1.7.0-3 libpam-modules-bin_1.7.0-3 libpam-runtime_1.7.0-3 libpam0g_1.7.0-3 libpcre2-16-0_10.45-1 libpcre2-32-0_10.45-1 libpcre2-8-0_10.45-1 libpcre2-dev_10.45-1 libpcre2-posix3_10.45-1 libperl5.40_5.40.1-3 libpipeline1_1.5.8-1 libpkgconf3_1.8.1-4 libproc2-0_2:4.0.4-8 libquadmath0_14.2.0-19 libquadmath0-amd64-cross_14.2.0-19cross1 libseccomp2_2.6.0-2 libselinux1_3.8.1-1 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openssl-provider-legacy_3.5.0-1 patch_2.8-1 perl_5.40.1-3 perl-base_5.40.1-3 perl-modules-5.40_5.40.1-3 pkgconf_1.8.1-4 pkgconf-bin_1.8.1-4 po-debconf_1.0.21+nmu1 procps_2:4.0.4-8 rpcsvc-proto_1.4.3-1+b1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2+b1 sensible-utils_0.0.25 sqv_1.3.0-2 sysvinit-utils_3.14-4 tar_1.35+dfsg-3.1 time_1.9-0.2+b1 util-linux_2.41-5 xz-utils_5.8.1-1 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: ncbi-blast+ Binary: ncbi-blast+, ncbi-blast+-legacy Architecture: any all Version: 2.16.0+ds-7 Maintainer: Debian Med Packaging Team Uploaders: Olivier Sallou , Andreas Tille , Aaron M. Ucko Homepage: https://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/ Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/ncbi-blastplus Vcs-Git: https://salsa.debian.org/med-team/ncbi-blastplus.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), autoconf2.69 Build-Depends-Arch: libboost-test-dev, libbz2-dev, libc-dev-bin, libgnutls28-dev, liblmdb-dev, libmbedtls-dev, libncbi-vdb-dev [amd64 arm64 x32], libnghttp2-dev, libpcre2-dev, libsqlite3-dev, libuv1-dev, time, zlib1g-dev, procps Package-List: ncbi-blast+ deb science optional arch=any ncbi-blast+-legacy deb science optional arch=all Checksums-Sha1: 1dfe116e602e0eafe0cfbc68c164549c6420c8f7 18407664 ncbi-blast+_2.16.0+ds.orig.tar.xz 1701d240abc5ebc0c45d1f4f1a58abfdcca4e9e7 43184 ncbi-blast+_2.16.0+ds-7.debian.tar.xz Checksums-Sha256: b98c86118edd2c4a048303caaed70b6debb11dd4372e83795b397cd193fcaf42 18407664 ncbi-blast+_2.16.0+ds.orig.tar.xz d11f5d3eed04386009f6fd7880ee99e7fb95f7f7afdc78f5bfaacf76be27b468 43184 ncbi-blast+_2.16.0+ds-7.debian.tar.xz Files: e00a1576df10271e9ac076d7de108462 18407664 ncbi-blast+_2.16.0+ds.orig.tar.xz dfbf38247edac622a8521148a4ec1136 43184 ncbi-blast+_2.16.0+ds-7.debian.tar.xz Dgit: 8fb9387a371f80c3577b3562b6ce2f51306e2add debian archive/debian/2.16.0+ds-7 https://git.dgit.debian.org/ncbi-blast+ -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEfDq5z9IwvTDdAJxZHnCRsfFKZKIFAmgW5DgACgkQHnCRsfFK ZKIEBA//Tg28kUkTpf3shGgodsmHyTAMS6JUbriUE0f+OjVsPIs2pj3YmE1CJBhS LaecQr2TZSiTMLrmID/8O2EEioTGJqYNHKTPLw7RSKXhilWD8aa7lMxv3AjvRvgh ZY8/oaXu2HzOneVEKhgdoNBedmtYu81C7cbEndL4D9fSJQXJwfN9FjSgBtKRGoj9 TLt5DQKx57BFLpE4KLMvyjUMuzZatQVpUwUhs7mn2N9rgEZBcZ/K9R/SLCmhUgLs Ev4G3E2MWxS+vq+CL2fv4Qh2YOK1P7x2IBqkxNIGH4eql33D1iZVHqQMwmM0dJYX KwMbF+FuTJob2qrvXkF90vOAhdlJsGCWYL6ZNMjoiLH4/JlBlgJo+Nxo4wD+22B3 7LddWxdi/AstiUZs1nJeFv2D44Y3COu2b3haSLvj8uQxArKGPmFknsCM6FrFp/Sf 5K8T0TpLFOdb4jGaZdB0WW1j41AURNNtCMCnWM0s0o9usn1kU7Sv9o7JoxDAQynn C8tlpQckAhIolrVpJV4tcGNYAQcMxOs/lWWc8rHv93fD/FaExEg5MHk/OAMjB4EU pShrJFV2VThXXL46pznwBx67l9oxoY0KRGlQFxloqIbd6O4nzYNxelpL1w7G8r6r KmPVEWeIQLOWo9ldkiijiXDqVT8TcwHe9tMfntfjxs3e7sUA4b4= =gJo8 -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./ncbi-blast+_2.16.0+ds-7.dsc: unsupported subcommand dpkg-source: info: extracting ncbi-blast+ in /<> dpkg-source: info: unpacking ncbi-blast+_2.16.0+ds.orig.tar.xz dpkg-source: info: unpacking ncbi-blast+_2.16.0+ds-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying system_mbedtls_only dpkg-source: info: applying support_mbedtls3 dpkg-source: info: applying allow_pcre2 dpkg-source: info: applying optin_usage_report dpkg-source: info: applying enable_clean_after_failed_compile dpkg-source: info: applying hurd_fixes dpkg-source: info: applying legacy_rename_rpsblast dpkg-source: info: applying fix_lib_deps dpkg-source: info: applying no_multiarch_rpath dpkg-source: info: applying use_pie_for_apps dpkg-source: info: applying skip_services_unit_test dpkg-source: info: applying fix_configure dpkg-source: info: applying support_x32 dpkg-source: info: applying suppress_tls_version_checks dpkg-source: info: applying optionally_keep_sequence dpkg-source: info: applying fix_unit_tests dpkg-source: info: applying spelling dpkg-source: info: applying support_gcc10 dpkg-source: info: applying run_perl_directly dpkg-source: info: applying tune_lmdb_defaults dpkg-source: info: applying 2to3 dpkg-source: info: applying big_endian_workaround dpkg-source: info: applying fix_bm_for_gcc15 Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.amd64 DEB_BUILD_OPTIONS=nocheck HOME=/var/lib/sbuild LANG=en_GB.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut OLDPWD=/ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/<> SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aamd64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package ncbi-blast+ dpkg-buildpackage: info: source version 2.16.0+ds-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Aaron M. Ucko dpkg-architecture: warning: specified GNU system type x86_64-linux-gnu does not match CC system type aarch64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from ncbi-blast+-2.16.0+ds/debian/source/options: --extend-diff-ignore=(^|/)config.(sub|guess)$ debian/rules clean dh clean --sourcedirectory=c++ --with-autoreconf dh_auto_clean -O--sourcedirectory=c\+\+ -O--with-autoreconf dh_autoreconf_clean -O--sourcedirectory=c\+\+ -O--with-autoreconf debian/rules override_dh_clean make[1]: Entering directory '/<>' cp c++/src/util/lmdb/Makefile.orig c++/src/util/lmdb/Makefile.orig.save cp c++/src/util/lmdbxx/Makefile.orig c++/src/util/lmdbxx/Makefile.orig.save cp c++/src/util/lmdbxx/lmdb++.h.orig c++/src/util/lmdbxx/lmdb++.h.orig.save cp c++/configure.orig configure.orig.save dh_clean #Tricky - for each module directory there may be several module files #or there may be none but then there is still a module named after the #directory. Clean everything! for x in c++/src/objects/* ; do \ (cd "$x" && ( \ mods="`echo *.module`" ; \ [ "${mods#*\*}" = "$mods" ] || mods="`basename $x`" ; \ for mod in $mods ; do \ /<>/c++/BUILD.native/build/new_module.sh $mod purge_sources ; \ done ) ; \ ) ; \ done /bin/sh: 2: cd: can't cd to c++/src/objects/CMakeLists.txt /bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.in /bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.sources /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.cmd /bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.sh /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found make[1]: [debian/rules:188: override_dh_clean] Error 127 (ignored) for x in c++/src/objtools/eutils/* ; do \ (cd "$x" && ( \ mods="`echo *.module`" ; \ [ "${mods#*\*}" = "$mods" ] || mods="`basename $x`" ; \ for mod in $mods ; do \ /<>/c++/BUILD.native/build/new_module.sh --dtd $mod purge_sources ; \ done ) ; \ ) ; \ done /bin/sh: 2: cd: can't cd to c++/src/objtools/eutils/CMakeLists.txt /bin/sh: 2: cd: can't cd to c++/src/objtools/eutils/Makefile.in /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found /bin/sh: 6: /<>/c++/BUILD.native/build/new_module.sh: not found make[1]: [debian/rules:189: override_dh_clean] Error 127 (ignored) cd c++/src/objtools/eutils/efetch && \ /<>/c++/BUILD.native/build/new_module.sh --xsd efetch purge_sources /bin/sh: 2: /<>/c++/BUILD.native/build/new_module.sh: not found make[1]: [debian/rules:190: override_dh_clean] Error 127 (ignored) rm -rf c++/compilers/dll c++/config.log c++/Makefile rm -f c++/configure.lineno c++/src/objects/blastxml/blastxml.module rm -f c++/include/common/ncbi_revision.h find -name check_exec.pid -delete rm -rf c++/BUILD c++/BUILD.native fakehome mv configure.orig.save c++/configure.orig mv c++/src/util/lmdb/Makefile.orig.save c++/src/util/lmdb/Makefile.orig mv c++/src/util/lmdbxx/Makefile.orig.save c++/src/util/lmdbxx/Makefile.orig mv c++/src/util/lmdbxx/lmdb++.h.orig.save c++/src/util/lmdbxx/lmdb++.h.orig make[1]: Leaving directory '/<>' debian/rules binary-arch dh binary-arch --sourcedirectory=c++ --with-autoreconf dh_update_autotools_config -a -O--sourcedirectory=c\+\+ -O--with-autoreconf debian/rules override_dh_autoreconf make[1]: Entering directory '/<>' cd c++ && \ autoheader2.69 -Isrc/build-system src/build-system/configure.ac \ && cd src/build-system && autoconf2.69 src/build-system/configure.ac:10350: warning: *** Please don't forget to update .../src/build-system/NEWS if appropriate! *** configure.ac:10350: warning: *** Please don't forget to update .../src/build-system/NEWS if appropriate! *** make[1]: Leaving directory '/<>' debian/rules override_dh_auto_configure-arch make[1]: Entering directory '/<>' cd c++ && PREBUILT_PTB_EXE=bootstrap \ ./configure --without-autodep --without-makefile-auto-update --with-flat-makefile --without-caution --without-dbapi --without-lzo --without-debug --without-sse42 --with-vdb=/usr VDB_INCLUDE="-I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/x86_64 -I/usr/include/ncbi-vdb/cc/gcc" CFLAGS_FOR_BUILD="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fPIE" LDFLAGS_FOR_BUILD="-specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now" --without-objects \ --without-algo --without-app --with-build-root=BUILD.native || \ (tail -v -n +0 config.log BUILD.native/status/config.log; exit 1) configure: WARNING: unrecognized options: --without-dbapi, --without-objects, --without-algo configure: creating cache config.cache configure: WARNING: --with(out)-objects is deprecated configure: WARNING: please simply pass an appropriate project list configure: WARNING: --with(out)-dbapi is deprecated configure: WARNING: please simply pass an appropriate project list configure: WARNING: --with(out)-algo is deprecated configure: WARNING: please simply pass an appropriate project list checking TeamCity build number... none checking VCS revision... unknown checking NCBI stable components' version... unknown checking build system type... aarch64-unknown-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking for gcc... gcc checking whether the C compiler works... no configure: error: in `/<>/c++': configure: error: C compiler cannot create executables See `config.log' for more details ==> config.log <== This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by ncbi-tools++ configure 0.0, which was generated by GNU Autoconf 2.69. Invocation command line was $ /<>/c++/src/build-system/configure --srcdir=/<>/c++ --without-debug --with-strip --with-openmp --with-mt --without-vdb --without-gnutls --without-gcrypt --with-build-root=./ReleaseMT --with-experimental=Int8GI --without-autodep --without-makefile-auto-update --with-flat-makefile --without-caution --without-dbapi --without-lzo --without-debug --without-sse42 --with-vdb=/usr VDB_INCLUDE=-I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/x86_64 -I/usr/include/ncbi-vdb/cc/gcc CFLAGS_FOR_BUILD=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fPIE LDFLAGS_FOR_BUILD=-specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now --without-objects --without-algo --without-app --with-build-root=BUILD.native ## --------- ## ## Platform. ## ## --------- ## hostname = sbuild uname -m = aarch64 uname -r = 6.1.0-28-arm64 uname -s = Linux uname -v = #1 SMP Debian 6.1.119-1 (2024-11-22) /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = aarch64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /usr/local/sbin PATH: /usr/local/bin PATH: /usr/sbin PATH: /usr/bin PATH: /sbin PATH: /bin PATH: /usr/games ## ----------- ## ## Core tests. ## ## ----------- ## configure:4406: creating cache config.cache configure:6318: WARNING: --with(out)-objects is deprecated configure:6320: WARNING: please simply pass an appropriate project list configure:6324: WARNING: --with(out)-dbapi is deprecated configure:6326: WARNING: please simply pass an appropriate project list configure:6330: WARNING: --with(out)-algo is deprecated configure:6332: WARNING: please simply pass an appropriate project list configure:6462: checking TeamCity build number configure:6473: result: none configure:6478: checking VCS revision configure:6500: result: unknown configure:6512: checking NCBI stable components' version configure:6524: result: unknown configure:6567: checking build system type configure:6581: result: aarch64-unknown-linux-gnu configure:6601: checking host system type configure:6614: result: aarch64-unknown-linux-gnu configure:6671: checking for a BSD-compatible install configure:6739: result: /usr/bin/install -c configure:6938: checking for gcc configure:6954: found /usr/bin/gcc configure:6965: result: gcc configure:7194: checking for C compiler version configure:7203: gcc --version >&5 gcc (Debian 14.2.0-19) 14.2.0 Copyright (C) 2024 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:7214: $? = 0 configure:7203: gcc -v >&5 Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/aarch64-linux-gnu/14/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none OFFLOAD_TARGET_DEFAULT=1 Target: aarch64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 14.2.0-19' --with-bugurl=file:///usr/share/doc/gcc-14/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2,rust --prefix=/usr --with-gcc-major-version-only --program-suffix=-14 --program-prefix=aarch64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/libexec --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-libstdcxx-backtrace --enable-gnu-unique-object --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --enable-fix-cortex-a53-843419 --disable-werror --enable-offload-targets=nvptx-none=/build/reproducible-path/gcc-14-14.2.0/debian/tmp-nvptx/usr --enable-offload-defaulted --without-cuda-driver --enable-checking=release --build=aarch64-linux-gnu --host=aarch64-linux-gnu --target=aarch64-linux-gnu --with-build-config=bootstrap-lto-lean --enable-link-serialization=2 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 14.2.0 (Debian 14.2.0-19) ... rest of stderr output deleted ... configure:7214: $? = 0 configure:7203: gcc -V >&5 gcc: error: unrecognized command-line option '-V' gcc: fatal error: no input files compilation terminated. configure:7214: $? = 1 configure:7203: gcc -qversion >&5 gcc: error: unrecognized command-line option '-qversion'; did you mean '--version'? gcc: fatal error: no input files compilation terminated. configure:7214: $? = 1 configure:7234: checking whether the C compiler works configure:7256: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -D_FORTIFY_SOURCE=2 -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now conftest.c >&5 cc1: error: '-fcf-protection=full' is not supported for this target configure:7260: $? = 1 configure:7298: result: no configure: failed program was: | /* confdefs.h */ | #define NCBI_INT8_GI 1 | #define NCBI_CXX_TOOLKIT 1 | #define HAVE_COMMON_NCBI_BUILD_VER_H 1 | #define HOST "aarch64-unknown-linux-gnu" | #define HOST_CPU "aarch64" | #define HOST_VENDOR "unknown" | #define HOST_OS "linux-gnu" | /* end confdefs.h. */ | | int | main () | { | | ; | return 0; | } configure:7303: error: in `/<>/c++': configure:7305: error: C compiler cannot create executables See `config.log' for more details ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=aarch64-unknown-linux-gnu ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set=set ac_cv_env_CFLAGS_value='-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic' ac_cv_env_CPPFLAGS_set=set ac_cv_env_CPPFLAGS_value=-D_FORTIFY_SOURCE=2 ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set=set ac_cv_env_CXXFLAGS_value='-g -O2 -ffile-prefix-map=/<>=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection' ac_cv_env_CXX_set= ac_cv_env_CXX_value= ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value='-specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now' ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_XMKMF_set= ac_cv_env_XMKMF_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_host=aarch64-unknown-linux-gnu ac_cv_path_install='/usr/bin/install -c' ac_cv_prog_ac_ct_CC=gcc ## ----------------- ## ## Output variables. ## ## ----------------- ## AES_FLAG='' ALLOW_UNDEF='' AMQ='' APACHE_ARROW_INCLUDE='' APACHE_ARROW_LIBS='' APACHE_ARROW_STATIC_LIBS='' APP_LDFLAGS='' APP_LIBS_SETTING='' APP_LIB_SETTING='' APP_NOCOPY='' APP_OR_NULL='' AR='' AR_FILTER='' AR_WRAPPER='' AS_NEEDED='' AVROGENCPP='' AVRO_INCLUDE='' AVRO_LIBS='' AVRO_STATIC_LIBS='' AWK='' AWS_SDK_INCLUDE='' AWS_SDK_LIBS='' AWS_SDK_STATIC_LIBS='' BACKWARD_CPP_INCLUDE='' BACKWARD_CPP_LIBS='' BASENAME='' BDB_CACHE_LIB='' BDB_LIB='' BERKELEYDB_CXX_LIBS='' BERKELEYDB_CXX_STATIC_LIBS='' BERKELEYDB_INCLUDE='' BERKELEYDB_LIBS='' BERKELEYDB_STATIC_LIBS='' BINCOPY='' BOOST_CHRONO_LIBS='' BOOST_CHRONO_STATIC_LIBS='' BOOST_FILESYSTEM_LIBS='' BOOST_FILESYSTEM_STATIC_LIBS='' BOOST_INCLUDE='' BOOST_IOSTREAMS_LIBS='' BOOST_IOSTREAMS_STATIC_LIBS='' BOOST_LIBPATH='' BOOST_PROGRAM_OPTIONS_LIBS='' BOOST_PROGRAM_OPTIONS_STATIC_LIBS='' BOOST_REGEX_LIBS='' BOOST_REGEX_STATIC_LIBS='' BOOST_SERIALIZATION_LIBS='' BOOST_SERIALIZATION_STATIC_LIBS='' BOOST_STATIC_TAG='' BOOST_SYSTEM_LIBS='' BOOST_SYSTEM_STATIC_LIBS='' BOOST_TAG='' BOOST_TEST_PEM_LIBS='' BOOST_TEST_PEM_STATIC_LIBS='' BOOST_TEST_TEM_LIBS='' BOOST_TEST_TEM_STATIC_LIBS='' BOOST_TEST_UTF_LIBS='' BOOST_TEST_UTF_STATIC_LIBS='' BOOST_THREAD_LIBS='' BOOST_THREAD_STATIC_LIBS='' BUILD_EXEEXT='' BUILD_OBJEXT='' BZ2_INCLUDE='' BZ2_LIB='' BZ2_LIBS='' CASSANDRA_INCLUDE='' CASSANDRA_LIBS='' CASSANDRA_STATIC_LIBS='' CC='gcc' CCACHE='' CC_FILTER='' CC_FOR_BUILD='' CC_WRAPPER='' CD_REPORTER='' CEREAL_INCLUDE='' CFLAGS='-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic' CFLAGS_DLL='' CFLAGS_FOR_BUILD='-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fPIE' CHECK_ARG='' CHECK_OS_NAME='' CHECK_TIMEOUT_MULT='' CHECK_TOOLS='' COLOR_DIAGNOSTICS='' COMPILER='' CONNEXT='' CPP='' CPPFLAGS='-D_FORTIFY_SOURCE=2' CPPFLAGS_FOR_BUILD='' CPPKAFKA_INCLUDE='' CPPKAFKA_LIBS='' CPPKAFKA_STATIC_LIBS='' CPP_FOR_BUILD='' CRC32C_INCLUDE='' CRC32C_LIBS='' CRC32C_STATIC_LIBS='' CRYPT_LIBS='' CURL_CONFIG='' CURL_INCLUDE='' CURL_LIBS='' CURL_STATIC_LIBS='' CXX='' CXXCPP='' CXXFLAGS='-g -O2 -ffile-prefix-map=/<>=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection' CXXFLAGS_DLL='' CXX_FILTER='' CXX_WRAPPER='' C_LIBS='' C_LINK='' DBAPI_CTLIB='' DBAPI_DRIVER='' DBAPI_FTDS100='' DBAPI_FTDS='' DBAPI_MYSQL='' DBAPI_ODBC='' DEBUG_SFX='' DEFS='' DEMANGLE_LIBS='' DEPFLAGS='' DEPFLAGS_POST='' DISTCC='' DLL='' DLL_LDFLAGS='' DLL_LIB_SETTING='' DL_LIBS='' DPKG_ARCHITECTURE='' DRMAA2_INCLUDE='' DRMAA2_LIBS='' D_SFX='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='' EGREP_Q='' EXEEXT='' EXPAT_INCLUDE='' EXPAT_LIBS='' EXPAT_STATIC_LIBS='' FASTCGIPP_INCLUDE='' FASTCGIPP_LIBS='' FASTCGI_INCLUDE='' FASTCGI_LIBS='' FASTCGI_OBJS='' FAST_CFLAGS='' FAST_CXXFLAGS='' FAST_LDFLAGS='' FEATURES='' FORBID_UNDEF='' FORCE_STATIC_LIB='' FOUNDATION_LIBS='' FREETYPE_INCLUDE='' FREETYPE_LIBS='' FTDS100_CTLIB_INCLUDE='' FTDS100_CTLIB_LIB='' FTDS100_CTLIB_LIBS='' FTDS100_INCLUDE='' FTDS100_LIB='' FTDS100_LIBS='' FTDS_INCLUDE='' FTDS_LIB='' FTDS_LIBS='' FTGL_INCLUDE='' FTGL_LIBS='' GCCPCH='' GCRYPT_INCLUDE='' GCRYPT_LIBS='' GIF_INCLUDE='' GIF_LIBS='' GL2PS_INCLUDE='' GL2PS_LIBS='' GL2PS_STATIC_LIBS='' GLEW_INCLUDE='' GLEW_LIBS='' GLEW_STATIC_LIBS='' GLUT_INCLUDE='' GLUT_LIBS='' GMOCK_INCLUDE='' GMOCK_LIBS='' GMOCK_STATIC_LIBS='' GMP_INCLUDE='' GMP_LIBS='' GNUTLS_INCLUDE='' GNUTLS_LIBS='' GOOGLE_CLOUD_INCLUDE='' GOOGLE_CLOUD_LIBS='' GREP='' GRPC_BIN='' GRPC_CPP_PLUGIN='' GRPC_INCLUDE='' GRPC_LIBS='' GRPC_REFLECTION_LIBS='' GRPC_UNSECURE_LIBS='' GSOAP_INCLUDE='' GSOAP_LIBS='' GSOAP_PATH='' GSOAP_SOAPCPP2='' GSOAP_WSDL2H='' H2O_INCLUDE='' H2O_LIBS='' H2O_STATIC_LIBS='' HDF5_INCLUDE='' HDF5_LIBS='' HIREDIS_INCLUDE='' HIREDIS_LIBS='' HIREDIS_STATIC_LIBS='' ICONV_LIBS='' ICU_CONFIG='' ICU_INCLUDE='' ICU_LIBS='' ICU_STATIC_LIBS='' IF_DEACTIVATING='' IF_REBUILDING_CONDITIONALLY='' IF_REBUILDING_LIBS='' IF_WITH_DLL='' INFLUXDB_INCLUDE='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' JAEGER_INCLUDE='' JAEGER_LIBS='' JAEGER_STATIC_LIBS='' JDK_INCLUDE='' JDK_PATH='' JPEG_INCLUDE='' JPEG_LIBS='' KRB5_CONFIG='' KRB5_INCLUDE='' KRB5_LIBS='' KSTAT_LIBS='' KeepStateTarget='' LAPACK_INCLUDE='' LAPACK_LIBS='' LDD='' LDD_R='' LDFLAGS='-specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now' LDFLAGS_FOR_BUILD='-specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now' LEVELDB_INCLUDE='' LEVELDB_LIBS='' LIBDW_INCLUDE='' LIBDW_LIBS='' LIBEXSLT_INCLUDE='' LIBEXSLT_LIBS='' LIBEXSLT_STATIC_LIBS='' LIBGCRYPT_CONFIG='' LIBGNUTLS_CONFIG='' LIBIMR='' LIBOB='' LIBOBJS='' LIBRDKAFKA_INCLUDE='' LIBRDKAFKA_LIBS='' LIBRDKAFKA_STATIC_LIBS='' LIBS='' LIBSSH2_INCLUDE='' LIBSSH2_LIBS='' LIBSSH2_STATIC_LIBS='' LIBSSSDB='' LIBSSSUTILS='' LIBUNWIND_INCLUDE='' LIBUNWIND_LIBS='' LIBURING_INCLUDE='' LIBURING_LIBS='' LIBUV_INCLUDE='' LIBUV_LIBS='' LIBUV_STATIC_LIBS='' LIBXLSXWRITER_INCLUDE='' LIBXLSXWRITER_LIBS='' LIBXLSXWRITER_STATIC_LIBS='' LIBXML_INCLUDE='' LIBXML_LIBS='' LIBXML_STATIC_LIBS='' LIBXSLT_INCLUDE='' LIBXSLT_LIBS='' LIBXSLT_STATIC_LIBS='' LIB_OR_DLL='' LINK='' LINK_DLL='' LINK_FILTER='' LINK_LOADABLE='' LINK_WRAPPER='' LMDB_INCLUDE='' LMDB_LIB='' LMDB_LIBS='' LMDB_STATIC_LIBS='' LN_S='' LTLIBOBJS='' LZO_INCLUDE='' LZO_LIBS='' MAGIC_INCLUDE='' MAGIC_LIBS='' MAKE='/usr/bin/make' MATH_LIBS='' MBEDTLS_INCLUDE='' MBEDTLS_LIBS='' MIMETIC_INCLUDE='' MIMETIC_LIBS='' MONGODB3_INCLUDE='' MONGODB3_LIBS='' MONGODB3_STATIC_LIBS='' MONGODB_INCLUDE='' MONGODB_LIBS='' MONGODB_STATIC_LIBS='' MSGSL_INCLUDE='' MT_SFX='' MUPARSER_INCLUDE='' MUPARSER_LIBS='' MYSQL_INCLUDE='' MYSQL_LIBS='' NCBIATOMIC_LIB='' NCBICRYPT_INCLUDE='' NCBICRYPT_LIBS='' NCBI_C_INCLUDE='' NCBI_C_LIBPATH='' NCBI_C_ncbi='' NCBI_PLATFORM_BITS='' NCBI_REVISION='' NCBI_SC_VERSION='0' NCBI_SSS_INCLUDE='' NCBI_SSS_LIBPATH='' NCBI_SUBVERSION_REVISION='0' NCBI_TEAMCITY_BUILDCONF_NAME='' NCBI_TEAMCITY_BUILD_ID='' NCBI_TEAMCITY_BUILD_NUMBER='0' NCBI_TEAMCITY_PROJECT_NAME='' NETTLE_INCLUDE='' NETTLE_LIBS='' NETWORK_LIBS='' NETWORK_PURE_LIBS='' NGHTTP2_INCLUDE='' NGHTTP2_LIBS='' NGHTTP2_STATIC_LIBS='' NGS_INCLUDE='' NGS_LIBS='' NGS_STATIC_LIBS='' NLOHMANN_JSON_INCLUDE='' NO_AS_NEEDED='' NO_STRICT_ALIASING='' NO_WHOLE_ARCHIVE='' OBJCXX_CXXFLAGS='' OBJCXX_LIBS='' OBJEXT='' ODBC_INCLUDE='' ODBC_LIBS='' OECHEM_INCLUDE='' OECHEM_LIBS='' OPENGL_INCLUDE='' OPENGL_LIBS='' OPENGL_STATIC_LIBS='' OPENMP_FLAGS='' OPENSSL_INCLUDE='' OPENSSL_LIBS='' OPENSSL_STATIC_LIBS='' OPENTRACING_INCLUDE='' OPENTRACING_LIBS='' OPENTRACING_STATIC_LIBS='' OPT_GROUPS='' ORBACUS_INCLUDE='' ORBACUS_LIBPATH='' OSMESA_INCLUDE='' OSMESA_LIBS='' OSMESA_STATIC_LIBS='' OSTYPE='linux-gnu' PACKAGE_BUGREPORT='cpp-core@ncbi.nlm.nih.gov' PACKAGE_NAME='ncbi-tools++' PACKAGE_STRING='ncbi-tools++ 0.0' PACKAGE_TARNAME='ncbi-tools--' PACKAGE_URL='' PACKAGE_VERSION='0.0' PATH_SEPARATOR=':' PCRE2_INCLUDE='' PCRE2_LIBS='' PCREPOSIX_LIBS='' PCRE_INCLUDE='' PCRE_LEGACY_LIBS='' PCRE_LIB='' PCRE_LIBS='' PERL='' PERL_INCLUDE='' PERL_LIBS='' PNG_INCLUDE='' PNG_LIBS='' PROJECTS='' PROTOBUF_BIN='' PROTOBUF_INCLUDE='' PROTOBUF_LIBS='' PROTOC='' PYTHON25='' PYTHON25_INCLUDE='' PYTHON25_LIBS='' PYTHON26='' PYTHON26_INCLUDE='' PYTHON26_LIBS='' PYTHON27='' PYTHON27_INCLUDE='' PYTHON27_LIBS='' PYTHON3='' PYTHON3_INCLUDE='' PYTHON3_LIBS='' PYTHON='' PYTHON_INCLUDE='' PYTHON_LIBS='' RANLIB='' RESOLVER_LIBS='' ROCKSDB_INCLUDE='' ROCKSDB_LIBS='' RPCSVC_LIBS='' RT_LIBS='' RUNPATH_ORIGIN='' Rules='' SABLOT_INCLUDE='' SABLOT_LIBS='' SABLOT_STATIC_LIBS='' SASL2_INCLUDE='' SASL2_LIBS='' SED='' SGE_INCLUDE='' SGE_LIBS='' SHELL='/bin/bash' SP_INCLUDE='' SP_LIBS='' SQLITE3_INCLUDE='' SQLITE3_LIBS='' SQLITE3_STATIC_LIBS='' SQLITE3_WRAPPER='' SSE4_1_FLAG='' STATIC='' STRIP='' SYBASE_DBLIBS='' SYBASE_DLLS='' SYBASE_INCLUDE='' SYBASE_LCL_PATH='' SYBASE_LIBS='' SYBASE_PATH='' TAIL='' TAIL_N='' TCHECK_CL='' THREAD_LIBS='' THRIFT_INCLUDE='' THRIFT_LIBS='' THRIFT_STATIC_LIBS='' TIFF_INCLUDE='' TIFF_LIBS='' TOUCH='' UNGIF_INCLUDE='' UNGIF_LIBS='' UNIX_SRC='' UNIX_USR_PROJ='' UNLESS_PUBSEQOS='' UNLESS_WITH_DLL='' UNSAFE_MATH_FLAG='' USUAL_AND_DLL='' USUAL_AND_LIB='' UUIDGEN='' UUID_LIBS='' VALGRIND_PATH='' VDB_INCLUDE='-I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/x86_64 -I/usr/include/ncbi-vdb/cc/gcc' VDB_LIBS='' VDB_POST_LINK='' VDB_REQ='' VDB_STATIC_LIBS='' WHOLE_ARCHIVE='' WXWIDGETS_GL_LIBS='' WXWIDGETS_GL_STATIC_LIBS='' WXWIDGETS_INCLUDE='' WXWIDGETS_LIBS='' WXWIDGETS_POST_LINK='' WXWIDGETS_STATIC_LIBS='' XALAN_INCLUDE='' XALAN_LIBS='' XALAN_STATIC_LIBS='' XCONNEXT='' XERCES_INCLUDE='' XERCES_LIBS='' XERCES_STATIC_LIBS='' XMKMF='' XPM_INCLUDE='' XPM_LIBS='' XSLTPROC='' X_CFLAGS='' X_EXTRA_LIBS='' X_LIBS='' X_PRE_LIBS='' YAML_CPP_INCLUDE='' YAML_CPP_LIBS='' YAML_CPP_STATIC_LIBS='' ZORBA_INCLUDE='' ZORBA_LIBS='' ZORBA_STATIC_LIBS='' ZSTD_INCLUDE='' ZSTD_LIBS='' ZSTD_STATIC_LIBS='' Z_INCLUDE='' Z_LIB='' Z_LIBS='' _ACJNI_JAVAC='' ac_ct_CC='gcc' ac_ct_CC_FOR_BUILD='' ac_ct_CXX='' algo='' app='' bamread='' bdb='' bindir='${exec_prefix}/bin' build='aarch64-unknown-linux-gnu' build_alias='' build_cpu='aarch64' build_os='linux-gnu' build_root='' build_vendor='unknown' builddir='' c_ncbi_runpath='' check='' compiler='' compiler_root='' compiler_version='' configurables_mfname='' datadir='${datarootdir}' datarootdir='${prefix}/share' dbapi='' dll_ext='' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exe_ext='' exec_prefix='NONE' f_compile='' f_libpath='' f_outexe='' f_outlib='' f_outobj='' f_runpath='' freetds='' freetype_config='' gui='' has_dll_loadable='' host='aarch64-unknown-linux-gnu' host_alias='' host_cpu='aarch64' host_os='linux-gnu' host_vendor='unknown' htmldir='${docdir}' ifGNUmake='' includedir='${prefix}/include' infodir='${datarootdir}/info' internal='' lib_ext='' lib_l_ext='' lib_l_pre='' lib_pre='' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' loadable_ext='' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' make_shell='' mandir='${datarootdir}/man' mysql_config='' ncbi_id2proc_snp='' ncbi_id2proc_wgs='' ncbi_java='' ncbi_runpath='' ncbi_xloader_bam='' ncbi_xloader_csra='' ncbi_xloader_snp='' ncbi_xloader_sra='' ncbi_xloader_vdbgraph='' ncbi_xloader_wgs='' ncbi_xreader_pubseqos2='' ncbi_xreader_pubseqos='' ncbicntr='' obj_ext='' objects='' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='NONE' program_transform_name='s,x,x,' psdir='${docdir}' runpath='' sbindir='${exec_prefix}/sbin' script_shell='' serial='' serial_ws50_rtti_kludge='' sharedstatedir='${prefix}/com' signature='' sraread='' srcdir='.' sssutils='' status_dir='' sysconfdir='${prefix}/etc' target_alias='' top_srcdir='' wxconf='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define NCBI_INT8_GI 1 #define NCBI_CXX_TOOLKIT 1 #define HAVE_COMMON_NCBI_BUILD_VER_H 1 #define HOST "aarch64-unknown-linux-gnu" #define HOST_CPU "aarch64" #define HOST_VENDOR "unknown" #define HOST_OS "linux-gnu" configure: exit 77 tail: cannot open 'BUILD.native/status/config.log' for reading: No such file or directory make[1]: *** [debian/rules:91: /<>/c++/BUILD.native/bin/datatool] Error 1 make[1]: Leaving directory '/<>' make: *** [debian/rules:220: binary-arch] Error 2 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2025-05-17T20:27:05Z +------------------------------------------------------------------------------+ | Finished Timed Build Commands | +------------------------------------------------------------------------------+ rm -Rf /<>/ ------------------------------------------------------- I: Finished running 'rm -Rf /<>/'. Finished processing commands. -------------------------------------------------------------------------------- Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Build-Space: n/a Build-Time: 20 Distribution: unstable Fail-Stage: build Foreign Architectures: amd64 Host Architecture: amd64 Install-Time: 57 Job: ncbi-blast+_2.16.0+ds-7 Machine Architecture: arm64 Package: ncbi-blast+ Package-Time: 117 Source-Version: 2.16.0+ds-7 Space: n/a Status: attempted Version: 2.16.0+ds-7 -------------------------------------------------------------------------------- Finished at 2025-05-17T20:27:05Z Build needed 00:01:57, no disk space