sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | ncbi-tools6 6.1.20170106+dfsg2-3 (armel) Sun, 11 Aug 2024 09:54:17 +0000 | +==============================================================================+ Package: ncbi-tools6 Version: 6.1.20170106+dfsg2-3 Source Version: 6.1.20170106+dfsg2-3 Distribution: unstable Machine Architecture: amd64 Host Architecture: armel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-fbf25181-3b81-4cea-82be-e60820c7cbbd' with '<>' I: NOTICE: Log filtering will replace 'build/ncbi-tools6-mjOmZd/resolver-M6qCYw' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [198 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2024-08-11-0808.59-F-2024-08-11-0209.14.pdiff [30.4 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2024-08-11-0808.59-F-2024-08-11-0209.14.pdiff [66.4 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2024-08-11-0808.59-F-2024-08-11-0209.14.pdiff [30.4 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2024-08-11-0808.59-F-2024-08-11-0209.14.pdiff [66.4 kB] Get:6 http://localhost:3142/debian sid/main armel Packages [9449 kB] Fetched 9871 kB in 4s (2630 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: cpp-14 cpp-14-x86-64-linux-gnu g++-14 g++-14-x86-64-linux-gnu gcc-14 gcc-14-base gcc-14-x86-64-linux-gnu libasan8 libatomic1 libcc1-0 libgcc-14-dev libgcc-s1 libgomp1 libhwasan0 libitm1 liblsan0 libquadmath0 libstdc++-14-dev libstdc++6 libtsan2 libubsan1 21 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 60.3 MB of archives. After this operation, 3072 B of additional disk space will be used. Get:1 http://localhost:3142/debian sid/main amd64 libcc1-0 amd64 14.2.0-2 [42.9 kB] Get:2 http://localhost:3142/debian sid/main amd64 libgomp1 amd64 14.2.0-2 [137 kB] Get:3 http://localhost:3142/debian sid/main amd64 libitm1 amd64 14.2.0-2 [25.9 kB] Get:4 http://localhost:3142/debian sid/main amd64 libatomic1 amd64 14.2.0-2 [9288 B] Get:5 http://localhost:3142/debian sid/main amd64 libasan8 amd64 14.2.0-2 [2724 kB] Get:6 http://localhost:3142/debian sid/main amd64 liblsan0 amd64 14.2.0-2 [1205 kB] Get:7 http://localhost:3142/debian sid/main amd64 libtsan2 amd64 14.2.0-2 [2461 kB] Get:8 http://localhost:3142/debian sid/main amd64 libubsan1 amd64 14.2.0-2 [1075 kB] Get:9 http://localhost:3142/debian sid/main amd64 libhwasan0 amd64 14.2.0-2 [1489 kB] Get:10 http://localhost:3142/debian sid/main amd64 libquadmath0 amd64 14.2.0-2 [145 kB] Get:11 http://localhost:3142/debian sid/main amd64 gcc-14-base amd64 14.2.0-2 [46.0 kB] Get:12 http://localhost:3142/debian sid/main amd64 libstdc++6 amd64 14.2.0-2 [714 kB] Get:13 http://localhost:3142/debian sid/main amd64 gcc-14 amd64 14.2.0-2 [521 kB] Get:14 http://localhost:3142/debian sid/main amd64 g++-14 amd64 14.2.0-2 [19.0 kB] Get:15 http://localhost:3142/debian sid/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-2 [12.1 MB] Get:16 http://localhost:3142/debian sid/main amd64 libstdc++-14-dev amd64 14.2.0-2 [2343 kB] Get:17 http://localhost:3142/debian sid/main amd64 libgcc-14-dev amd64 14.2.0-2 [2672 kB] Get:18 http://localhost:3142/debian sid/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-2 [21.4 MB] Get:19 http://localhost:3142/debian sid/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-2 [11.1 MB] Get:20 http://localhost:3142/debian sid/main amd64 cpp-14 amd64 14.2.0-2 [1272 B] Get:21 http://localhost:3142/debian sid/main amd64 libgcc-s1 amd64 14.2.0-2 [72.8 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 60.3 MB in 0s (197 MB/s) (Reading database ... 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Setting up cpp-14 (14.2.0-2) ... Setting up libubsan1:amd64 (14.2.0-2) ... Setting up libhwasan0:amd64 (14.2.0-2) ... Setting up libasan8:amd64 (14.2.0-2) ... Setting up libtsan2:amd64 (14.2.0-2) ... Setting up libcc1-0:amd64 (14.2.0-2) ... Setting up liblsan0:amd64 (14.2.0-2) ... Setting up libitm1:amd64 (14.2.0-2) ... Setting up libgcc-14-dev:amd64 (14.2.0-2) ... Setting up libstdc++-14-dev:amd64 (14.2.0-2) ... Setting up gcc-14-x86-64-linux-gnu (14.2.0-2) ... Setting up gcc-14 (14.2.0-2) ... Setting up g++-14-x86-64-linux-gnu (14.2.0-2) ... Setting up g++-14 (14.2.0-2) ... Processing triggers for libc-bin (2.39-6) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'ncbi-tools6' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/ncbi-tools6.git Please use: git clone https://salsa.debian.org/med-team/ncbi-tools6.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 67.2 MB of source archives. Get:1 http://localhost:3142/debian sid/main ncbi-tools6 6.1.20170106+dfsg2-3 (dsc) [2919 B] Get:2 http://localhost:3142/debian sid/main ncbi-tools6 6.1.20170106+dfsg2-3 (tar) [65.7 MB] Get:3 http://localhost:3142/debian sid/main ncbi-tools6 6.1.20170106+dfsg2-3 (diff) [1515 kB] Fetched 67.2 MB in 0s (198 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/ncbi-tools6-mjOmZd/ncbi-tools6-6.1.20170106+dfsg2' with '<>' I: NOTICE: Log filtering will replace 'build/ncbi-tools6-mjOmZd' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel, csh | c-shell, libglu1-mesa-dev | libglu-dev, libgnutls28-dev | gnutls-dev, libmotif-dev, libpcre3-dev, libpng-dev, libxmu-dev Filtered Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel, csh, libglu1-mesa-dev, libgnutls28-dev, libmotif-dev, libpcre3-dev, libpng-dev, libxmu-dev dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [883 B] Get:5 copy:/<>/apt_archive ./ Packages [871 B] Fetched 2363 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following packages were automatically installed and are no longer required: login mount tzdata Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdextrautils cpp-14-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel csh debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file fontconfig-config fonts-dejavu-core fonts-dejavu-mono g++-14-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-14-arm-linux-gnueabi gcc-14-arm-linux-gnueabi-base gcc-14-base:armel gcc-14-cross-base-ports gcc-arm-linux-gnueabi gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan8:armel libasan8-armel-cross libatomic1:armel libatomic1-armel-cross libbrotli-dev:armel libbrotli1 libbrotli1:armel libbsd0:armel libbz2-1.0:armel libbz2-dev:armel libc6:armel libc6-armel-cross libc6-dev:armel libc6-dev-armel-cross libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:armel libcrypt1:armel libdebhelper-perl libdebian-dpkgcross-perl libdrm-amdgpu1:armel libdrm-common libdrm-radeon1:armel libdrm2:armel libedit2:armel libelf1t64 libelf1t64:armel libevent-2.1-7t64:armel libexpat1 libexpat1:armel libexpat1-dev:armel libfakeroot libffi8:armel libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfontconfig-dev:armel libfontconfig1 libfontconfig1:armel libfontconfig1-dev:armel libfreetype-dev:armel libfreetype6 libfreetype6:armel libgcc-14-dev:armel libgcc-14-dev-armel-cross libgcc-s1:armel libgcc-s1-armel-cross libgl-dev:armel libgl1:armel libgl1-mesa-dri:armel libglapi-mesa:armel libglu1-mesa:armel libglu1-mesa-dev:armel libglvnd0:armel libglx-dev:armel libglx-mesa0:armel libglx0:armel libgmp-dev:armel libgmp10:armel libgmpxx4ldbl:armel libgnutls-dane0t64:armel libgnutls-openssl27t64:armel libgnutls28-dev:armel libgnutls30t64:armel libgomp1:armel libgomp1-armel-cross libhogweed6t64:armel libice-dev:armel libice6 libice6:armel libicu72 libicu72:armel libidn2-0:armel libidn2-dev:armel libio-string-perl libjpeg62-turbo libjpeg62-turbo:armel libllvm17t64:armel liblocale-gettext-perl liblzma5:armel libmagic-mgc libmagic1t64 libmd0:armel libmotif-common libmotif-dev:armel libmrm4 libmrm4:armel libnettle8t64:armel libopengl-dev:armel libopengl0:armel libp11-kit-dev:armel libp11-kit0:armel libpcre16-3:armel libpcre3:armel libpcre3-dev:armel libpcre32-3:armel libpcrecpp0v5:armel libpipeline1 libpkgconf3 libpng-dev:armel libpng16-16t64 libpng16-16t64:armel libsensors-config libsensors5:armel libsm-dev:armel libsm6 libsm6:armel libssl3t64:armel libstdc++-14-dev:armel libstdc++-14-dev-armel-cross libstdc++6:armel libstdc++6-armel-cross libtasn1-6:armel libtasn1-6-dev:armel libtinfo6:armel libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libuil4 libuil4:armel libunbound8:armel libunistring5:armel libuuid1:armel libvulkan1:armel libx11-6 libx11-6:armel libx11-data libx11-dev libx11-dev:armel libx11-xcb1:armel libxau-dev libxau-dev:armel libxau6 libxau6:armel libxcb-dri2-0:armel libxcb-dri3-0:armel libxcb-glx0:armel libxcb-present0:armel libxcb-randr0:armel libxcb-shm0:armel libxcb-sync1:armel libxcb-xfixes0:armel libxcb1 libxcb1:armel libxcb1-dev libxcb1-dev:armel libxdmcp-dev libxdmcp-dev:armel libxdmcp6 libxdmcp6:armel libxext-dev:armel libxext6 libxext6:armel libxfixes3:armel libxft-dev:armel libxft2 libxft2:armel libxm4 libxm4:armel libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxml2:armel libxmu-dev:armel libxmu-headers libxmu6 libxmu6:armel libxrender-dev:armel libxrender1 libxrender1:armel libxshmfence1:armel libxt-dev:armel libxt6t64 libxt6t64:armel libxxf86vm1:armel libyaml-perl libz3-4:armel libzstd1:armel m4 man-db nettle-dev:armel pkgconf:armel pkgconf-bin po-debconf sensible-utils ucf uil uuid-dev:armel x11-common x11proto-dev xorg-sgml-doctools xtrans-dev zlib1g:armel zlib1g-dev:armel Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-14-locales cpp-14-doc cpp-doc dh-make binutils-multiarch gcc-14-doc manpages-dev flex bison gdb-arm-linux-gnueabi gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armel libc-l10n:armel locales:armel libnss-nis:armel libnss-nisplus:armel manpages-dev:armel freetype2-doc:armel gmp-doc:armel libgmp10-doc:armel libmpfr-dev:armel dns-root-data:armel gnutls-bin:armel gnutls-doc:armel libice-doc:armel p11-kit-doc:armel lm-sensors lm-sensors:armel libsm-doc:armel libstdc++-14-doc:armel libtool-doc gfortran | fortran95-compiler gcj-jdk uuid-runtime:armel libx11-doc libx11-doc:armel libxcb-doc libxcb-doc:armel libxext-doc:armel libxt-doc:armel libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx bzip2-doc:armel libarchive-cpio-perl libpng-tools:armel libtasn1-doc:armel libltdl-dev mesa-vulkan-drivers:armel | vulkan-icd:armel libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdextrautils cpp-14-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel csh debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file fontconfig-config fonts-dejavu-core fonts-dejavu-mono g++-14-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-14-arm-linux-gnueabi gcc-14-arm-linux-gnueabi-base gcc-14-base:armel gcc-14-cross-base-ports gcc-arm-linux-gnueabi gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan8:armel libasan8-armel-cross libatomic1:armel libatomic1-armel-cross libbrotli-dev:armel libbrotli1 libbrotli1:armel libbsd0:armel libbz2-1.0:armel libbz2-dev:armel libc6:armel libc6-armel-cross libc6-dev:armel libc6-dev-armel-cross libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:armel libcrypt1:armel libdebhelper-perl libdebian-dpkgcross-perl libdrm-amdgpu1:armel libdrm-common libdrm-radeon1:armel libdrm2:armel libedit2:armel libelf1t64 libelf1t64:armel libevent-2.1-7t64:armel libexpat1 libexpat1:armel libexpat1-dev:armel libfakeroot libffi8:armel libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfontconfig-dev:armel libfontconfig1 libfontconfig1:armel libfontconfig1-dev:armel libfreetype-dev:armel libfreetype6 libfreetype6:armel libgcc-14-dev:armel libgcc-14-dev-armel-cross libgcc-s1:armel libgcc-s1-armel-cross libgl-dev:armel libgl1:armel libgl1-mesa-dri:armel libglapi-mesa:armel libglu1-mesa:armel libglu1-mesa-dev:armel libglvnd0:armel libglx-dev:armel libglx-mesa0:armel libglx0:armel libgmp-dev:armel libgmp10:armel libgmpxx4ldbl:armel libgnutls-dane0t64:armel libgnutls-openssl27t64:armel libgnutls28-dev:armel libgnutls30t64:armel libgomp1:armel libgomp1-armel-cross libhogweed6t64:armel libice-dev:armel libice6 libice6:armel libicu72 libicu72:armel libidn2-0:armel libidn2-dev:armel libio-string-perl libjpeg62-turbo libjpeg62-turbo:armel libllvm17t64:armel liblocale-gettext-perl liblzma5:armel libmagic-mgc libmagic1t64 libmd0:armel libmotif-common libmotif-dev:armel libmrm4 libmrm4:armel libnettle8t64:armel libopengl-dev:armel libopengl0:armel libp11-kit-dev:armel libp11-kit0:armel libpcre16-3:armel libpcre3:armel libpcre3-dev:armel libpcre32-3:armel libpcrecpp0v5:armel libpipeline1 libpkgconf3 libpng-dev:armel libpng16-16t64 libpng16-16t64:armel libsensors-config libsensors5:armel libsm-dev:armel libsm6 libsm6:armel libssl3t64:armel libstdc++-14-dev:armel libstdc++-14-dev-armel-cross libstdc++6:armel libstdc++6-armel-cross libtasn1-6:armel libtasn1-6-dev:armel libtinfo6:armel libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libuil4 libuil4:armel libunbound8:armel libunistring5:armel libuuid1:armel libvulkan1:armel libx11-6 libx11-6:armel libx11-data libx11-dev libx11-dev:armel libx11-xcb1:armel libxau-dev libxau-dev:armel libxau6 libxau6:armel libxcb-dri2-0:armel libxcb-dri3-0:armel libxcb-glx0:armel libxcb-present0:armel libxcb-randr0:armel libxcb-shm0:armel libxcb-sync1:armel libxcb-xfixes0:armel libxcb1 libxcb1:armel libxcb1-dev libxcb1-dev:armel libxdmcp-dev libxdmcp-dev:armel libxdmcp6 libxdmcp6:armel libxext-dev:armel libxext6 libxext6:armel libxfixes3:armel libxft-dev:armel libxft2 libxft2:armel libxm4 libxm4:armel libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxml2:armel libxmu-dev:armel libxmu-headers libxmu6 libxmu6:armel libxrender-dev:armel libxrender1 libxrender1:armel libxshmfence1:armel libxt-dev:armel libxt6t64 libxt6t64:armel libxxf86vm1:armel libyaml-perl libz3-4:armel libzstd1:armel m4 man-db nettle-dev:armel pkgconf:armel pkgconf-bin po-debconf sbuild-build-depends-main-dummy:armel sensible-utils ucf uil uuid-dev:armel x11-common x11proto-dev xorg-sgml-doctools xtrans-dev zlib1g:armel zlib1g-dev:armel 0 upgraded, 232 newly installed, 0 to remove and 0 not upgraded. Need to get 165 MB of archives. After this operation, 630 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [968 B] Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-7 [15.0 kB] Get:3 http://localhost:3142/debian sid/main amd64 x11-common all 1:7.7+23.1 [216 kB] Get:4 http://localhost:3142/debian sid/main amd64 libmotif-common all 2.3.8-3.1 [34.6 kB] Get:5 http://localhost:3142/debian sid/main amd64 libxau6 amd64 1:1.0.9-1+b1 [18.1 kB] Get:6 http://localhost:3142/debian sid/main amd64 libxdmcp6 amd64 1:1.1.2-3+b1 [24.3 kB] Get:7 http://localhost:3142/debian sid/main amd64 libxcb1 amd64 1.17.0-2 [144 kB] Get:8 http://localhost:3142/debian sid/main amd64 libx11-data all 2:1.8.7-1 [328 kB] Get:9 http://localhost:3142/debian sid/main amd64 libx11-6 amd64 2:1.8.7-1+b1 [799 kB] Get:10 http://localhost:3142/debian sid/main amd64 libexpat1 amd64 2.6.2-1 [103 kB] Get:11 http://localhost:3142/debian sid/main amd64 libbrotli1 amd64 1.1.0-2+b4 [300 kB] Get:12 http://localhost:3142/debian sid/main amd64 libpng16-16t64 amd64 1.6.43-5 [278 kB] Get:13 http://localhost:3142/debian sid/main amd64 libfreetype6 amd64 2.13.2+dfsg-1+b4 [439 kB] Get:14 http://localhost:3142/debian sid/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get:15 http://localhost:3142/debian sid/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get:16 http://localhost:3142/debian sid/main amd64 fontconfig-config amd64 2.15.0-1.1 [317 kB] Get:17 http://localhost:3142/debian sid/main amd64 libfontconfig1 amd64 2.15.0-1.1 [388 kB] Get:18 http://localhost:3142/debian sid/main amd64 libjpeg62-turbo amd64 1:2.1.5-3 [167 kB] Get:19 http://localhost:3142/debian sid/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get:20 http://localhost:3142/debian sid/main amd64 libxrender1 amd64 1:0.9.10-1.1+b1 [27.9 kB] Get:21 http://localhost:3142/debian sid/main amd64 libxft2 amd64 2.3.6-1+b1 [54.2 kB] Get:22 http://localhost:3142/debian sid/main amd64 libice6 amd64 2:1.0.10-1+b1 [56.7 kB] Get:23 http://localhost:3142/debian sid/main amd64 libsm6 amd64 2:1.2.3-1+b1 [33.6 kB] Get:24 http://localhost:3142/debian sid/main amd64 libxt6t64 amd64 1:1.2.1-1.2 [187 kB] Get:25 http://localhost:3142/debian sid/main amd64 libxmu6 amd64 2:1.1.3-3+b2 [58.7 kB] Get:26 http://localhost:3142/debian sid/main amd64 libxm4 amd64 2.3.8-3.1 [1054 kB] Get:27 http://localhost:3142/debian sid/main amd64 libmrm4 amd64 2.3.8-3.1 [83.6 kB] Get:28 http://localhost:3142/debian sid/main armel gcc-14-base armel 14.2.0-2 [46.0 kB] Get:29 http://localhost:3142/debian sid/main armel libgcc-s1 armel 14.2.0-2 [38.8 kB] Get:30 http://localhost:3142/debian sid/main armel libc6 armel 2.39-6 [2162 kB] Get:31 http://localhost:3142/debian sid/main armel libxau6 armel 1:1.0.9-1+b1 [17.5 kB] Get:32 http://localhost:3142/debian sid/main armel libmd0 armel 1.1.0-2 [32.2 kB] Get:33 http://localhost:3142/debian sid/main armel libbsd0 armel 0.12.2-1 [127 kB] Get:34 http://localhost:3142/debian sid/main armel libxdmcp6 armel 1:1.1.2-3+b1 [23.1 kB] Get:35 http://localhost:3142/debian sid/main armel libxcb1 armel 1.17.0-2 [140 kB] Get:36 http://localhost:3142/debian sid/main armel libx11-6 armel 2:1.8.7-1+b1 [735 kB] Get:37 http://localhost:3142/debian sid/main armel libexpat1 armel 2.6.2-1 [81.7 kB] Get:38 http://localhost:3142/debian sid/main armel libbrotli1 armel 1.1.0-2+b4 [294 kB] Get:39 http://localhost:3142/debian sid/main armel libbz2-1.0 armel 1.0.8-5.1 [35.9 kB] Get:40 http://localhost:3142/debian sid/main armel zlib1g armel 1:1.3.dfsg+really1.3.1-1 [74.6 kB] Get:41 http://localhost:3142/debian sid/main armel libpng16-16t64 armel 1.6.43-5 [263 kB] Get:42 http://localhost:3142/debian sid/main armel libfreetype6 armel 2.13.2+dfsg-1+b4 [373 kB] Get:43 http://localhost:3142/debian sid/main armel libfontconfig1 armel 2.15.0-1.1 [371 kB] Get:44 http://localhost:3142/debian sid/main armel libjpeg62-turbo armel 1:2.1.5-3 [145 kB] Get:45 http://localhost:3142/debian sid/main armel libxext6 armel 2:1.3.4-1+b1 [47.8 kB] Get:46 http://localhost:3142/debian sid/main armel libxrender1 armel 1:0.9.10-1.1+b1 [26.3 kB] Get:47 http://localhost:3142/debian sid/main armel libxft2 armel 2.3.6-1+b1 [47.8 kB] Get:48 http://localhost:3142/debian sid/main armel libice6 armel 2:1.0.10-1+b1 [49.7 kB] Get:49 http://localhost:3142/debian sid/main armel libuuid1 armel 2.40.2-6 [34.1 kB] Get:50 http://localhost:3142/debian sid/main armel libsm6 armel 2:1.2.3-1+b1 [31.9 kB] Get:51 http://localhost:3142/debian sid/main armel libxt6t64 armel 1:1.2.1-1.2 [157 kB] Get:52 http://localhost:3142/debian sid/main armel libxmu6 armel 2:1.1.3-3+b2 [51.6 kB] Get:53 http://localhost:3142/debian sid/main armel libxm4 armel 2.3.8-3.1 [852 kB] Get:54 http://localhost:3142/debian sid/main armel libmrm4 armel 2.3.8-3.1 [76.9 kB] Get:55 http://localhost:3142/debian sid/main amd64 libuil4 amd64 2.3.8-3.1 [153 kB] Get:56 http://localhost:3142/debian sid/main armel libuil4 armel 2.3.8-3.1 [133 kB] Get:57 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:58 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get:59 http://localhost:3142/debian sid/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get:60 http://localhost:3142/debian sid/main amd64 file amd64 1:5.45-3 [42.9 kB] Get:61 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get:62 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get:63 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get:64 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.40.2-6 [96.7 kB] Get:65 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get:66 http://localhost:3142/debian sid/main amd64 man-db amd64 2.12.1-3 [1414 kB] Get:67 http://localhost:3142/debian sid/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:68 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-4 [287 kB] Get:69 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-3 [332 kB] Get:70 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:71 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:72 http://localhost:3142/debian sid/main amd64 autopoint all 0.22.5-2 [723 kB] Get:73 http://localhost:3142/debian sid/main amd64 binutils-arm-linux-gnueabi amd64 2.43-2 [3305 kB] Get:74 http://localhost:3142/debian sid/main amd64 gcc-14-arm-linux-gnueabi-base amd64 14.2.0-1cross1 [45.9 kB] Get:75 http://localhost:3142/debian sid/main amd64 cpp-14-arm-linux-gnueabi amd64 14.2.0-1cross1 [10.4 MB] Get:76 http://localhost:3142/debian sid/main amd64 cpp-arm-linux-gnueabi amd64 4:14.1.0-1+b1 [4344 B] Get:77 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.20 [16.3 kB] Get:78 http://localhost:3142/debian sid/main amd64 gcc-14-cross-base-ports all 14.2.0-1cross1 [41.2 kB] Get:79 http://localhost:3142/debian sid/main amd64 libc6-armel-cross all 2.39-4cross1 [897 kB] Get:80 http://localhost:3142/debian sid/main amd64 libgcc-s1-armel-cross all 14.2.0-1cross1 [38.9 kB] Get:81 http://localhost:3142/debian sid/main amd64 libgomp1-armel-cross all 14.2.0-1cross1 [110 kB] Get:82 http://localhost:3142/debian sid/main amd64 libatomic1-armel-cross all 14.2.0-1cross1 [9264 B] Get:83 http://localhost:3142/debian sid/main amd64 libasan8-armel-cross all 14.2.0-1cross1 [2537 kB] Get:84 http://localhost:3142/debian sid/main amd64 libstdc++6-armel-cross all 14.2.0-1cross1 [546 kB] Get:85 http://localhost:3142/debian sid/main amd64 libubsan1-armel-cross all 14.2.0-1cross1 [1034 kB] Get:86 http://localhost:3142/debian sid/main amd64 libgcc-14-dev-armel-cross all 14.2.0-1cross1 [757 kB] Get:87 http://localhost:3142/debian sid/main amd64 gcc-14-arm-linux-gnueabi amd64 14.2.0-1cross1 [19.8 MB] Get:88 http://localhost:3142/debian sid/main amd64 gcc-arm-linux-gnueabi amd64 4:14.1.0-1+b1 [1452 B] Get:89 http://localhost:3142/debian sid/main amd64 libc6-dev-armel-cross all 2.39-4cross1 [1305 kB] Get:90 http://localhost:3142/debian sid/main amd64 libstdc++-14-dev-armel-cross all 14.2.0-1cross1 [2332 kB] Get:91 http://localhost:3142/debian sid/main amd64 g++-14-arm-linux-gnueabi amd64 14.2.0-1cross1 [11.4 MB] Get:92 http://localhost:3142/debian sid/main amd64 g++-arm-linux-gnueabi amd64 4:14.1.0-1+b1 [1208 B] Get:93 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-3 [44.8 kB] Get:94 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:95 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-5 [9396 kB] Get:96 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.12.7+dfsg-3+b1 [671 kB] Get:97 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:98 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:99 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:100 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-4 [313 kB] Get:101 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:102 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.31-1 [64.8 kB] Get:103 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:104 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:105 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:106 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:107 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.20 [25.8 kB] Get:108 http://localhost:3142/debian sid/main amd64 crossbuild-essential-armel all 12.10 [3484 B] Get:109 http://localhost:3142/debian sid/main amd64 csh amd64 20240808-1 [240 kB] Get:110 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.16 [88.6 kB] Get:111 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-7 [517 kB] Get:112 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:113 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:114 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get:115 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get:116 http://localhost:3142/debian sid/main amd64 libelf1t64 amd64 0.191-2 [188 kB] Get:117 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:118 http://localhost:3142/debian sid/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get:119 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:120 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:121 http://localhost:3142/debian sid/main amd64 debhelper all 13.16 [891 kB] Get:122 http://localhost:3142/debian sid/main amd64 libfakeroot amd64 1.35.1-1 [28.6 kB] Get:123 http://localhost:3142/debian sid/main amd64 fakeroot amd64 1.35.1-1 [74.5 kB] Get:124 http://localhost:3142/debian sid/main armel libasan8 armel 14.2.0-2 [2547 kB] Get:125 http://localhost:3142/debian sid/main armel libatomic1 armel 14.2.0-2 [9508 B] Get:126 http://localhost:3142/debian sid/main armel libbrotli-dev armel 1.1.0-2+b4 [302 kB] Get:127 http://localhost:3142/debian sid/main armel libcrypt1 armel 1:4.4.36-4 [96.9 kB] Get:128 http://localhost:3142/debian sid/main armel libcrypt-dev armel 1:4.4.36-4 [126 kB] Get:129 http://localhost:3142/debian sid/main armel libc6-dev armel 2.39-6 [1310 kB] Get:130 http://localhost:3142/debian sid/main armel libbz2-dev armel 1.0.8-5.1 [27.8 kB] Get:131 http://localhost:3142/debian sid/main amd64 libdrm-common all 2.4.122-1 [7992 B] Get:132 http://localhost:3142/debian sid/main armel libdrm2 armel 2.4.122-1 [35.0 kB] Get:133 http://localhost:3142/debian sid/main armel libdrm-amdgpu1 armel 2.4.122-1 [20.9 kB] Get:134 http://localhost:3142/debian sid/main armel libdrm-radeon1 armel 2.4.122-1 [20.2 kB] Get:135 http://localhost:3142/debian sid/main armel libtinfo6 armel 6.5-2 [329 kB] Get:136 http://localhost:3142/debian sid/main armel libedit2 armel 3.1-20240517-1 [76.4 kB] Get:137 http://localhost:3142/debian sid/main armel libzstd1 armel 1.5.6+dfsg-1 [260 kB] Get:138 http://localhost:3142/debian sid/main armel libelf1t64 armel 0.191-2 [184 kB] Get:139 http://localhost:3142/debian sid/main armel libevent-2.1-7t64 armel 2.1.12-stable-10 [164 kB] Get:140 http://localhost:3142/debian sid/main armel libexpat1-dev armel 2.6.2-1 [136 kB] Get:141 http://localhost:3142/debian sid/main armel libffi8 armel 3.4.6-1 [19.8 kB] Get:142 http://localhost:3142/debian sid/main armel zlib1g-dev armel 1:1.3.dfsg+really1.3.1-1 [905 kB] Get:143 http://localhost:3142/debian sid/main armel libpng-dev armel 1.6.43-5 [346 kB] Get:144 http://localhost:3142/debian sid/main armel libfreetype-dev armel 2.13.2+dfsg-1+b4 [549 kB] Get:145 http://localhost:3142/debian sid/main armel uuid-dev armel 2.40.2-6 [45.5 kB] Get:146 http://localhost:3142/debian sid/main amd64 libpkgconf3 amd64 1.8.1-3 [36.2 kB] Get:147 http://localhost:3142/debian sid/main amd64 pkgconf-bin amd64 1.8.1-3 [29.9 kB] Get:148 http://localhost:3142/debian sid/main armel pkgconf armel 1.8.1-3 [26.0 kB] Get:149 http://localhost:3142/debian sid/main armel libfontconfig-dev armel 2.15.0-1.1 [396 kB] Get:150 http://localhost:3142/debian sid/main armel libfontconfig1-dev armel 2.15.0-1.1 [269 kB] Get:151 http://localhost:3142/debian sid/main armel libgomp1 armel 14.2.0-2 [112 kB] Get:152 http://localhost:3142/debian sid/main armel libstdc++6 armel 14.2.0-2 [593 kB] Get:153 http://localhost:3142/debian sid/main armel libubsan1 armel 14.2.0-2 [1035 kB] Get:154 http://localhost:3142/debian sid/main armel libgcc-14-dev armel 14.2.0-2 [762 kB] Get:155 http://localhost:3142/debian sid/main armel libglvnd0 armel 1.7.0-1+b1 [54.1 kB] Get:156 http://localhost:3142/debian sid/main armel libglapi-mesa armel 24.1.5-3 [45.3 kB] Get:157 http://localhost:3142/debian sid/main armel libx11-xcb1 armel 2:1.8.7-1+b1 [232 kB] Get:158 http://localhost:3142/debian sid/main armel libxcb-dri2-0 armel 1.17.0-2 [106 kB] Get:159 http://localhost:3142/debian sid/main armel libxcb-dri3-0 armel 1.17.0-2 [106 kB] Get:160 http://localhost:3142/debian sid/main armel libxcb-glx0 armel 1.17.0-2 [120 kB] Get:161 http://localhost:3142/debian sid/main armel libxcb-present0 armel 1.17.0-2 [105 kB] Get:162 http://localhost:3142/debian sid/main armel libxcb-randr0 armel 1.17.0-2 [115 kB] Get:163 http://localhost:3142/debian sid/main armel libxcb-shm0 armel 1.17.0-2 [105 kB] Get:164 http://localhost:3142/debian sid/main armel libxcb-sync1 armel 1.17.0-2 [108 kB] Get:165 http://localhost:3142/debian sid/main armel libxcb-xfixes0 armel 1.17.0-2 [109 kB] Get:166 http://localhost:3142/debian sid/main armel libxfixes3 armel 1:6.0.0-2+b1 [18.7 kB] Get:167 http://localhost:3142/debian sid/main armel libxshmfence1 armel 1.3-1+b1 [9236 B] Get:168 http://localhost:3142/debian sid/main armel libxxf86vm1 armel 1:1.1.4-1+b2 [22.2 kB] Get:169 http://localhost:3142/debian sid/main armel libvulkan1 armel 1.3.283.0-1 [109 kB] Get:170 http://localhost:3142/debian sid/main armel libicu72 armel 72.1-5 [9037 kB] Get:171 http://localhost:3142/debian sid/main armel liblzma5 armel 5.6.2-2 [244 kB] Get:172 http://localhost:3142/debian sid/main armel libxml2 armel 2.12.7+dfsg-3+b1 [565 kB] Get:173 http://localhost:3142/debian sid/main armel libz3-4 armel 4.8.12-3.1+b2 [6068 kB] Get:174 http://localhost:3142/debian sid/main armel libllvm17t64 armel 1:17.0.6-15 [21.4 MB] Get:175 http://localhost:3142/debian sid/main amd64 libsensors-config all 1:3.6.0-10 [14.6 kB] Get:176 http://localhost:3142/debian sid/main armel libsensors5 armel 1:3.6.0-10 [33.5 kB] Get:177 http://localhost:3142/debian sid/main armel libgl1-mesa-dri armel 24.1.5-3 [5646 kB] Get:178 http://localhost:3142/debian sid/main armel libglx-mesa0 armel 24.1.5-3 [139 kB] Get:179 http://localhost:3142/debian sid/main armel libglx0 armel 1.7.0-1+b1 [26.2 kB] Get:180 http://localhost:3142/debian sid/main armel libgl1 armel 1.7.0-1+b1 [104 kB] Get:181 http://localhost:3142/debian sid/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get:182 http://localhost:3142/debian sid/main amd64 x11proto-dev all 2024.1-1 [603 kB] Get:183 http://localhost:3142/debian sid/main armel libxau-dev armel 1:1.0.9-1+b1 [20.9 kB] Get:184 http://localhost:3142/debian sid/main armel libxdmcp-dev armel 1:1.1.2-3+b1 [39.6 kB] Get:185 http://localhost:3142/debian sid/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB] Get:186 http://localhost:3142/debian sid/main armel libxcb1-dev armel 1.17.0-2 [179 kB] Get:187 http://localhost:3142/debian sid/main armel libx11-dev armel 2:1.8.7-1+b1 [816 kB] Get:188 http://localhost:3142/debian sid/main armel libglx-dev armel 1.7.0-1+b1 [15.8 kB] Get:189 http://localhost:3142/debian sid/main armel libgl-dev armel 1.7.0-1+b1 [101 kB] Get:190 http://localhost:3142/debian sid/main armel libopengl0 armel 1.7.0-1+b1 [37.7 kB] Get:191 http://localhost:3142/debian sid/main armel libglu1-mesa armel 9.0.2-1.1+b1 [152 kB] Get:192 http://localhost:3142/debian sid/main armel libopengl-dev armel 1.7.0-1+b1 [5376 B] Get:193 http://localhost:3142/debian sid/main armel libglu1-mesa-dev armel 9.0.2-1.1+b1 [195 kB] Get:194 http://localhost:3142/debian sid/main armel libgmp10 armel 2:6.3.0+dfsg-2+b1 [507 kB] Get:195 http://localhost:3142/debian sid/main armel libgmpxx4ldbl armel 2:6.3.0+dfsg-2+b1 [328 kB] Get:196 http://localhost:3142/debian sid/main armel libgmp-dev armel 2:6.3.0+dfsg-2+b1 [588 kB] Get:197 http://localhost:3142/debian sid/main armel libnettle8t64 armel 3.10-1 [309 kB] Get:198 http://localhost:3142/debian sid/main armel libhogweed6t64 armel 3.10-1 [321 kB] Get:199 http://localhost:3142/debian sid/main armel libunistring5 armel 1.2-1 [400 kB] Get:200 http://localhost:3142/debian sid/main armel libidn2-0 armel 2.3.7-2 [124 kB] Get:201 http://localhost:3142/debian sid/main armel libp11-kit0 armel 0.25.5-2 [407 kB] Get:202 http://localhost:3142/debian sid/main armel libtasn1-6 armel 4.19.0-3+b2 [43.2 kB] Get:203 http://localhost:3142/debian sid/main armel libgnutls30t64 armel 3.8.6-2 [1353 kB] Get:204 http://localhost:3142/debian sid/main armel libssl3t64 armel 3.3.1-2 [1826 kB] Get:205 http://localhost:3142/debian sid/main armel libunbound8 armel 1.20.0-1+b1 [520 kB] Get:206 http://localhost:3142/debian sid/main armel libgnutls-dane0t64 armel 3.8.6-2 [434 kB] Get:207 http://localhost:3142/debian sid/main armel libgnutls-openssl27t64 armel 3.8.6-2 [434 kB] Get:208 http://localhost:3142/debian sid/main armel libidn2-dev armel 2.3.7-2 [118 kB] Get:209 http://localhost:3142/debian sid/main armel libp11-kit-dev armel 0.25.5-2 [208 kB] Get:210 http://localhost:3142/debian sid/main armel libtasn1-6-dev armel 4.19.0-3+b2 [92.9 kB] Get:211 http://localhost:3142/debian sid/main armel nettle-dev armel 3.10-1 [1312 kB] Get:212 http://localhost:3142/debian sid/main armel libgnutls28-dev armel 3.8.6-2 [1312 kB] Get:213 http://localhost:3142/debian sid/main armel libice-dev armel 2:1.0.10-1+b1 [60.1 kB] Get:214 http://localhost:3142/debian sid/main armel libxrender-dev armel 1:0.9.10-1.1+b1 [33.3 kB] Get:215 http://localhost:3142/debian sid/main armel libxft-dev armel 2.3.6-1+b1 [66.4 kB] Get:216 http://localhost:3142/debian sid/main armel libsm-dev armel 2:1.2.3-1+b1 [35.1 kB] Get:217 http://localhost:3142/debian sid/main armel libxt-dev armel 1:1.2.1-1.2 [384 kB] Get:218 http://localhost:3142/debian sid/main amd64 uil amd64 2.3.8-3.1 [32.8 kB] Get:219 http://localhost:3142/debian sid/main armel libmotif-dev armel 2.3.8-3.1 [2325 kB] Get:220 http://localhost:3142/debian sid/main armel libpcre16-3 armel 2:8.39-15+b1 [235 kB] Get:221 http://localhost:3142/debian sid/main armel libpcre3 armel 2:8.39-15+b1 [315 kB] Get:222 http://localhost:3142/debian sid/main armel libpcre32-3 armel 2:8.39-15+b1 [225 kB] Get:223 http://localhost:3142/debian sid/main armel libpcrecpp0v5 armel 2:8.39-15+b1 [141 kB] Get:224 http://localhost:3142/debian sid/main armel libpcre3-dev armel 2:8.39-15+b1 [586 kB] Get:225 http://localhost:3142/debian sid/main armel libstdc++-14-dev armel 14.2.0-2 [2334 kB] Get:226 http://localhost:3142/debian sid/main amd64 libxau-dev amd64 1:1.0.9-1+b1 [21.3 kB] Get:227 http://localhost:3142/debian sid/main amd64 libxdmcp-dev amd64 1:1.1.2-3+b1 [40.8 kB] Get:228 http://localhost:3142/debian sid/main amd64 libxcb1-dev amd64 1.17.0-2 [181 kB] Get:229 http://localhost:3142/debian sid/main amd64 libx11-dev amd64 2:1.8.7-1+b1 [875 kB] Get:230 http://localhost:3142/debian sid/main armel libxext-dev armel 2:1.3.4-1+b1 [103 kB] Get:231 http://localhost:3142/debian sid/main amd64 libxmu-headers all 2:1.1.3-3 [68.5 kB] Get:232 http://localhost:3142/debian sid/main armel libxmu-dev armel 2:1.1.3-3+b2 [57.5 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 165 MB in 9s (17.7 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 12813 files and directories currently installed.) Preparing to unpack .../liblocale-gettext-perl_1.07-7_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-7) ... Selecting previously unselected package x11-common. Preparing to unpack .../x11-common_1%3a7.7+23.1_all.deb ... Unpacking x11-common (1:7.7+23.1) ... Setting up x11-common (1:7.7+23.1) ... invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Selecting previously unselected package libmotif-common. (Reading database ... 12860 files and directories currently installed.) Preparing to unpack .../000-libmotif-common_2.3.8-3.1_all.deb ... Unpacking libmotif-common (2.3.8-3.1) ... Selecting previously unselected package gcc-14-base:armel. Preparing to unpack .../001-gcc-14-base_14.2.0-2_armel.deb ... Unpacking gcc-14-base:armel (14.2.0-2) ... Selecting previously unselected package libgcc-s1:armel. Preparing to unpack .../002-libgcc-s1_14.2.0-2_armel.deb ... Unpacking libgcc-s1:armel (14.2.0-2) ... Selecting previously unselected package libc6:armel. Preparing to unpack .../003-libc6_2.39-6_armel.deb ... Unpacking libc6:armel (2.39-6) ... Selecting previously unselected package libxau6:armel. Preparing to unpack .../004-libxau6_1%3a1.0.9-1+b1_armel.deb ... Unpacking libxau6:armel (1:1.0.9-1+b1) ... Selecting previously unselected package libmd0:armel. Preparing to unpack .../005-libmd0_1.1.0-2_armel.deb ... Unpacking libmd0:armel (1.1.0-2) ... Selecting previously unselected package libbsd0:armel. Preparing to unpack .../006-libbsd0_0.12.2-1_armel.deb ... Unpacking libbsd0:armel (0.12.2-1) ... Selecting previously unselected package libxdmcp6:armel. Preparing to unpack .../007-libxdmcp6_1%3a1.1.2-3+b1_armel.deb ... Unpacking libxdmcp6:armel (1:1.1.2-3+b1) ... Selecting previously unselected package libxcb1:armel. Preparing to unpack .../008-libxcb1_1.17.0-2_armel.deb ... Unpacking libxcb1:armel (1.17.0-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../009-libx11-data_2%3a1.8.7-1_all.deb ... Unpacking libx11-data (2:1.8.7-1) ... Selecting previously unselected package libx11-6:armel. Preparing to unpack .../010-libx11-6_2%3a1.8.7-1+b1_armel.deb ... Unpacking libx11-6:armel (2:1.8.7-1+b1) ... Selecting previously unselected package libexpat1:armel. Preparing to unpack .../011-libexpat1_2.6.2-1_armel.deb ... Unpacking libexpat1:armel (2.6.2-1) ... Selecting previously unselected package libbrotli1:armel. Preparing to unpack .../012-libbrotli1_1.1.0-2+b4_armel.deb ... Unpacking libbrotli1:armel (1.1.0-2+b4) ... Selecting previously unselected package libbz2-1.0:armel. Preparing to unpack .../013-libbz2-1.0_1.0.8-5.1_armel.deb ... Unpacking libbz2-1.0:armel (1.0.8-5.1) ... Selecting previously unselected package zlib1g:armel. Preparing to unpack .../014-zlib1g_1%3a1.3.dfsg+really1.3.1-1_armel.deb ... Unpacking zlib1g:armel (1:1.3.dfsg+really1.3.1-1) ... Selecting previously unselected package libpng16-16t64:armel. Preparing to unpack .../015-libpng16-16t64_1.6.43-5_armel.deb ... Unpacking libpng16-16t64:armel (1.6.43-5) ... Selecting previously unselected package libfreetype6:armel. Preparing to unpack .../016-libfreetype6_2.13.2+dfsg-1+b4_armel.deb ... Unpacking libfreetype6:armel (2.13.2+dfsg-1+b4) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../017-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../018-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../019-fontconfig-config_2.15.0-1.1_amd64.deb ... Unpacking fontconfig-config (2.15.0-1.1) ... Selecting previously unselected package libfontconfig1:armel. Preparing to unpack .../020-libfontconfig1_2.15.0-1.1_armel.deb ... Unpacking libfontconfig1:armel (2.15.0-1.1) ... Selecting previously unselected package libjpeg62-turbo:armel. Preparing to unpack .../021-libjpeg62-turbo_1%3a2.1.5-3_armel.deb ... Unpacking libjpeg62-turbo:armel (1:2.1.5-3) ... Selecting previously unselected package libxext6:armel. Preparing to unpack .../022-libxext6_2%3a1.3.4-1+b1_armel.deb ... Unpacking libxext6:armel (2:1.3.4-1+b1) ... Selecting previously unselected package libxrender1:armel. Preparing to unpack .../023-libxrender1_1%3a0.9.10-1.1+b1_armel.deb ... Unpacking libxrender1:armel (1:0.9.10-1.1+b1) ... Selecting previously unselected package libxft2:armel. Preparing to unpack .../024-libxft2_2.3.6-1+b1_armel.deb ... Unpacking libxft2:armel (2.3.6-1+b1) ... Selecting previously unselected package libice6:armel. Preparing to unpack .../025-libice6_2%3a1.0.10-1+b1_armel.deb ... Unpacking libice6:armel (2:1.0.10-1+b1) ... Selecting previously unselected package libuuid1:armel. Preparing to unpack .../026-libuuid1_2.40.2-6_armel.deb ... Unpacking libuuid1:armel (2.40.2-6) ... Selecting previously unselected package libsm6:armel. Preparing to unpack .../027-libsm6_2%3a1.2.3-1+b1_armel.deb ... Unpacking libsm6:armel (2:1.2.3-1+b1) ... Selecting previously unselected package libxt6t64:armel. Preparing to unpack .../028-libxt6t64_1%3a1.2.1-1.2_armel.deb ... Unpacking libxt6t64:armel (1:1.2.1-1.2) ... Selecting previously unselected package libxmu6:armel. Preparing to unpack .../029-libxmu6_2%3a1.1.3-3+b2_armel.deb ... Unpacking libxmu6:armel (2:1.1.3-3+b2) ... Selecting previously unselected package libxm4:armel. Preparing to unpack .../030-libxm4_2.3.8-3.1_armel.deb ... Unpacking libxm4:armel (2.3.8-3.1) ... Selecting previously unselected package libmrm4:armel. Preparing to unpack .../031-libmrm4_2.3.8-3.1_armel.deb ... Unpacking libmrm4:armel (2.3.8-3.1) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../032-libxau6_1%3a1.0.9-1+b1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.9-1+b1) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../033-libxdmcp6_1%3a1.1.2-3+b1_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3+b1) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../034-libxcb1_1.17.0-2_amd64.deb ... Unpacking libxcb1:amd64 (1.17.0-2) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../035-libx11-6_2%3a1.8.7-1+b1_amd64.deb ... Unpacking libx11-6:amd64 (2:1.8.7-1+b1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../036-libexpat1_2.6.2-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.2-1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../037-libbrotli1_1.1.0-2+b4_amd64.deb ... Unpacking libbrotli1:amd64 (1.1.0-2+b4) ... Selecting previously unselected package libpng16-16t64:amd64. Preparing to unpack .../038-libpng16-16t64_1.6.43-5_amd64.deb ... Unpacking libpng16-16t64:amd64 (1.6.43-5) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../039-libfreetype6_2.13.2+dfsg-1+b4_amd64.deb ... Unpacking libfreetype6:amd64 (2.13.2+dfsg-1+b4) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../040-libfontconfig1_2.15.0-1.1_amd64.deb ... Unpacking libfontconfig1:amd64 (2.15.0-1.1) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../041-libjpeg62-turbo_1%3a2.1.5-3_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:2.1.5-3) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../042-libxext6_2%3a1.3.4-1+b1_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.4-1+b1) ... Selecting previously unselected package libxrender1:amd64. Preparing to unpack .../043-libxrender1_1%3a0.9.10-1.1+b1_amd64.deb ... Unpacking libxrender1:amd64 (1:0.9.10-1.1+b1) ... Selecting previously unselected package libxft2:amd64. Preparing to unpack .../044-libxft2_2.3.6-1+b1_amd64.deb ... Unpacking libxft2:amd64 (2.3.6-1+b1) ... Selecting previously unselected package libice6:amd64. Preparing to unpack .../045-libice6_2%3a1.0.10-1+b1_amd64.deb ... Unpacking libice6:amd64 (2:1.0.10-1+b1) ... Selecting previously unselected package libsm6:amd64. Preparing to unpack .../046-libsm6_2%3a1.2.3-1+b1_amd64.deb ... Unpacking libsm6:amd64 (2:1.2.3-1+b1) ... Selecting previously unselected package libxt6t64:amd64. Preparing to unpack .../047-libxt6t64_1%3a1.2.1-1.2_amd64.deb ... Unpacking libxt6t64:amd64 (1:1.2.1-1.2) ... Selecting previously unselected package libxmu6:amd64. Preparing to unpack .../048-libxmu6_2%3a1.1.3-3+b2_amd64.deb ... Unpacking libxmu6:amd64 (2:1.1.3-3+b2) ... Selecting previously unselected package libxm4:amd64. Preparing to unpack .../049-libxm4_2.3.8-3.1_amd64.deb ... Unpacking libxm4:amd64 (2.3.8-3.1) ... Selecting previously unselected package libmrm4:amd64. Preparing to unpack .../050-libmrm4_2.3.8-3.1_amd64.deb ... Unpacking libmrm4:amd64 (2.3.8-3.1) ... Selecting previously unselected package libuil4:amd64. Preparing to unpack .../051-libuil4_2.3.8-3.1_amd64.deb ... Unpacking libuil4:amd64 (2.3.8-3.1) ... Selecting previously unselected package libuil4:armel. Preparing to unpack .../052-libuil4_2.3.8-3.1_armel.deb ... Unpacking libuil4:armel (2.3.8-3.1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../053-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../054-libmagic-mgc_1%3a5.45-3_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../055-libmagic1t64_1%3a5.45-3_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../056-file_1%3a5.45-3_amd64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../057-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../058-libuchardet0_0.0.8-1+b1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../059-groff-base_1.23.0-5_amd64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../060-bsdextrautils_2.40.2-6_amd64.deb ... Unpacking bsdextrautils (2.40.2-6) ... Selecting previously unselected package libpipeline1:amd64. 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Unpacking libp11-kit0:armel (0.25.5-2) ... Selecting previously unselected package libtasn1-6:armel. Preparing to unpack .../198-libtasn1-6_4.19.0-3+b2_armel.deb ... Unpacking libtasn1-6:armel (4.19.0-3+b2) ... Selecting previously unselected package libgnutls30t64:armel. Preparing to unpack .../199-libgnutls30t64_3.8.6-2_armel.deb ... Unpacking libgnutls30t64:armel (3.8.6-2) ... Selecting previously unselected package libssl3t64:armel. Preparing to unpack .../200-libssl3t64_3.3.1-2_armel.deb ... Unpacking libssl3t64:armel (3.3.1-2) ... Selecting previously unselected package libunbound8:armel. Preparing to unpack .../201-libunbound8_1.20.0-1+b1_armel.deb ... Unpacking libunbound8:armel (1.20.0-1+b1) ... Selecting previously unselected package libgnutls-dane0t64:armel. Preparing to unpack .../202-libgnutls-dane0t64_3.8.6-2_armel.deb ... Unpacking libgnutls-dane0t64:armel (3.8.6-2) ... Selecting previously unselected package libgnutls-openssl27t64:armel. 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Setting up libx11-6:amd64 (2:1.8.7-1+b1) ... Setting up xorg-sgml-doctools (1:1.11-1.1) ... Setting up libc6-dev-armel-cross (2.39-4cross1) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up libdrm-common (2.4.122-1) ... Setting up libsm6:amd64 (2:1.2.3-1+b1) ... Setting up libxml2:amd64 (2.12.7+dfsg-3+b1) ... Setting up liblocale-gettext-perl (1.07-7) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up x11proto-dev (2024.1-1) ... Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libxau-dev:amd64 (1:1.0.9-1+b1) ... Setting up libgomp1-armel-cross (14.2.0-1cross1) ... Setting up libxrender1:amd64 (1:0.9.10-1.1+b1) ... Setting up libtool (2.4.7-7) ... Setting up fontconfig-config (2.15.0-1.1) ... Setting up cpp-14-arm-linux-gnueabi (14.2.0-1cross1) ... Setting up libgcc-s1-armel-cross (14.2.0-1cross1) ... 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Setting up man-db (2.12.1-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-4) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxm4:amd64 (2.3.8-3.1) ... Setting up libgcc-14-dev-armel-cross (14.2.0-1cross1) ... Setting up libxmu-headers (2:1.1.3-3) ... Setting up debhelper (13.16) ... 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Setting up libevent-2.1-7t64:armel (2.1.12-stable-10) ... Setting up zlib1g:armel (1:1.3.dfsg+really1.3.1-1) ... Setting up libcrypt1:armel (1:4.4.36-4) ... Setting up libxcb-shm0:armel (1.17.0-2) ... Setting up libgomp1:armel (14.2.0-2) ... Setting up libopengl0:armel (1.7.0-1+b1) ... Setting up libelf1t64:armel (0.191-2) ... Setting up libxcb-present0:armel (1.17.0-2) ... Setting up libxdmcp-dev:armel (1:1.1.2-3+b1) ... Setting up libpcre3:armel (2:8.39-15+b1) ... Setting up libnettle8t64:armel (3.10-1) ... Setting up libz3-4:armel (4.8.12-3.1+b2) ... Setting up libjpeg62-turbo:armel (1:2.1.5-3) ... Setting up libxcb-sync1:armel (1.17.0-2) ... Setting up libgmp10:armel (2:6.3.0+dfsg-2+b1) ... Setting up libp11-kit0:armel (0.25.5-2) ... Setting up libunistring5:armel (1.2-1) ... Setting up libpng16-16t64:armel (1.6.43-5) ... Setting up libpcre32-3:armel (2:8.39-15+b1) ... Setting up libatomic1:armel (14.2.0-2) ... Setting up libuuid1:armel (2.40.2-6) ... Setting up libsensors5:armel (1:3.6.0-10) ... Setting up libglapi-mesa:armel (24.1.5-3) ... Setting up libvulkan1:armel (1.3.283.0-1) ... Setting up libubsan1:armel (14.2.0-2) ... Setting up libxcb-dri2-0:armel (1.17.0-2) ... Setting up libhogweed6t64:armel (3.10-1) ... Setting up libcrypt-dev:armel (1:4.4.36-4) ... Setting up libxcb-randr0:armel (1.17.0-2) ... Setting up libc6-dev:armel (2.39-6) ... Setting up libx11-6:armel (2:1.8.7-1+b1) ... Setting up libglu1-mesa:armel (9.0.2-1.1+b1) ... Setting up libopengl-dev:armel (1.7.0-1+b1) ... Setting up libgcc-14-dev:armel (14.2.0-2) ... Setting up libstdc++-14-dev:armel (14.2.0-2) ... Setting up libsm6:armel (2:1.2.3-1+b1) ... Setting up libxml2:armel (2.12.7+dfsg-3+b1) ... Setting up libbrotli-dev:armel (1.1.0-2+b4) ... Setting up libp11-kit-dev:armel (0.25.5-2) ... Setting up libbz2-dev:armel (1.0.8-5.1) ... Setting up libpcrecpp0v5:armel (2:8.39-15+b1) ... Setting up libxcb-dri3-0:armel (1.17.0-2) ... Setting up libx11-xcb1:armel (2:1.8.7-1+b1) ... Setting up libxcb1-dev:armel (1.17.0-2) ... Setting up libxrender1:armel (1:0.9.10-1.1+b1) ... Setting up libsm-dev:armel (2:1.2.3-1+b1) ... Setting up libpcre3-dev:armel (2:8.39-15+b1) ... Setting up libssl3t64:armel (3.3.1-2) ... Setting up libx11-dev:armel (2:1.8.7-1+b1) ... Setting up libxext6:armel (2:1.3.4-1+b1) ... Setting up libidn2-0:armel (2.3.7-2) ... Setting up libxxf86vm1:armel (1:1.1.4-1+b2) ... Setting up libunbound8:armel (1.20.0-1+b1) ... Setting up libgmpxx4ldbl:armel (2:6.3.0+dfsg-2+b1) ... Setting up libllvm17t64:armel (1:17.0.6-15) ... Setting up libexpat1-dev:armel (2.6.2-1) ... Setting up libfreetype6:armel (2.13.2+dfsg-1+b4) ... Setting up libxfixes3:armel (1:6.0.0-2+b1) ... Setting up uuid-dev:armel (2.40.2-6) ... Setting up libxt6t64:armel (1:1.2.1-1.2) ... Setting up libidn2-dev:armel (2.3.7-2) ... Setting up libxext-dev:armel (2:1.3.4-1+b1) ... Setting up zlib1g-dev:armel (1:1.3.dfsg+really1.3.1-1) ... Setting up libfontconfig1:armel (2.15.0-1.1) ... Setting up libxrender-dev:armel (1:0.9.10-1.1+b1) ... Setting up libgnutls30t64:armel (3.8.6-2) ... Setting up libgnutls-openssl27t64:armel (3.8.6-2) ... Setting up libxft2:armel (2.3.6-1+b1) ... Setting up libxmu6:armel (2:1.1.3-3+b2) ... Setting up libgmp-dev:armel (2:6.3.0+dfsg-2+b1) ... Setting up nettle-dev:armel (3.10-1) ... Setting up libgl1-mesa-dri:armel (24.1.5-3) ... Setting up libpng-dev:armel (1.6.43-5) ... Setting up libfreetype-dev:armel (2.13.2+dfsg-1+b4) ... Setting up libgnutls-dane0t64:armel (3.8.6-2) ... Setting up libxt-dev:armel (1:1.2.1-1.2) ... Setting up libxm4:armel (2.3.8-3.1) ... Setting up libgnutls28-dev:armel (3.8.6-2) ... Setting up libglx-mesa0:armel (24.1.5-3) ... Setting up libglx0:armel (1.7.0-1+b1) ... Setting up libfontconfig-dev:armel (2.15.0-1.1) ... Setting up libxmu-dev:armel (2:1.1.3-3+b2) ... Setting up libgl1:armel (1.7.0-1+b1) ... Setting up libmrm4:armel (2.3.8-3.1) ... Setting up libuil4:armel (2.3.8-3.1) ... Setting up libglx-dev:armel (1.7.0-1+b1) ... Setting up libgl-dev:armel (1.7.0-1+b1) ... Setting up libxft-dev:armel (2.3.6-1+b1) ... Setting up libfontconfig1-dev:armel (2.15.0-1.1) ... Setting up libglu1-mesa-dev:armel (9.0.2-1.1+b1) ... Setting up libmotif-dev:armel (2.3.8-3.1) ... Setting up sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Processing triggers for libc-bin (2.39-6) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armel included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-23-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.99-1 (2024-07-15) amd64 (x86_64) Toolchain package versions: binutils_2.43-2 dpkg-dev_1.22.11 g++-14_14.2.0-2 gcc-14_14.2.0-2 libc6-dev_2.39-6 libstdc++-14-dev_14.2.0-2 libstdc++-14-dev-armel-cross_14.2.0-1cross1 libstdc++6_14.2.0-2 libstdc++6-armel-cross_14.2.0-1cross1 linux-libc-dev_6.10.3-1 Package versions: adduser_3.137 apt_2.9.7 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 autotools-dev_20220109.1 base-files_13.5 base-passwd_3.6.4 bash_5.2.21-2.1 binutils_2.43-2 binutils-arm-linux-gnueabi_2.43-2 binutils-common_2.43-2 binutils-x86-64-linux-gnu_2.43-2 bsdextrautils_2.40.2-6 bsdutils_1:2.40.2-6 build-essential_12.10 bzip2_1.0.8-5.1 coreutils_9.4-3.1 cpp_4:14.1.0-2 cpp-14_14.2.0-2 cpp-14-arm-linux-gnueabi_14.2.0-1cross1 cpp-14-x86-64-linux-gnu_14.2.0-2 cpp-arm-linux-gnueabi_4:14.1.0-1+b1 cpp-x86-64-linux-gnu_4:14.1.0-2 cross-config_2.6.20 crossbuild-essential-armel_12.10 csh_20240808-1 dash_0.5.12-9 debconf_1.5.87 debhelper_13.16 debian-archive-keyring_2023.4 debianutils_5.20 dh-autoreconf_20 dh-strip-nondeterminism_1.14.0-1 diffutils_1:3.10-1 dpkg_1.22.11 dpkg-cross_2.6.20 dpkg-dev_1.22.11 dwz_0.15-1+b1 fakeroot_1.35.1-1 file_1:5.45-3 findutils_4.10.0-3 fontconfig-config_2.15.0-1.1 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 g++_4:14.1.0-2 g++-14_14.2.0-2 g++-14-arm-linux-gnueabi_14.2.0-1cross1 g++-14-x86-64-linux-gnu_14.2.0-2 g++-arm-linux-gnueabi_4:14.1.0-1+b1 g++-x86-64-linux-gnu_4:14.1.0-2 gcc_4:14.1.0-2 gcc-14_14.2.0-2 gcc-14-arm-linux-gnueabi_14.2.0-1cross1 gcc-14-arm-linux-gnueabi-base_14.2.0-1cross1 gcc-14-base_14.2.0-2 gcc-14-cross-base-ports_14.2.0-1cross1 gcc-14-x86-64-linux-gnu_14.2.0-2 gcc-arm-linux-gnueabi_4:14.1.0-1+b1 gcc-x86-64-linux-gnu_4:14.1.0-2 gettext_0.22.5-2 gettext-base_0.22.5-2 gpgv_2.2.43-8 grep_3.11-4 groff-base_1.23.0-5 gzip_1.12-1.1 hostname_3.23+nmu2 init-system-helpers_1.66 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2 libapt-pkg6.0t64_2.9.7 libarchive-zip-perl_1.68-1 libasan8_14.2.0-2 libasan8-armel-cross_14.2.0-1cross1 libatomic1_14.2.0-2 libatomic1-armel-cross_14.2.0-1cross1 libattr1_1:2.5.2-1 libaudit-common_1:4.0.1-1 libaudit1_1:4.0.1-1 libbinutils_2.43-2 libblkid1_2.40.2-6 libbrotli-dev_1.1.0-2+b4 libbrotli1_1.1.0-2+b4 libbsd0_0.12.2-1 libbz2-1.0_1.0.8-5.1 libbz2-dev_1.0.8-5.1 libc-bin_2.39-6 libc-dev-bin_2.39-6 libc6_2.39-6 libc6-armel-cross_2.39-4cross1 libc6-dev_2.39-6 libc6-dev-armel-cross_2.39-4cross1 libcap-ng0_0.8.5-1+b1 libcap2_1:2.66-5 libcc1-0_14.2.0-2 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-3 libcrypt-dev_1:4.4.36-4 libcrypt1_1:4.4.36-4 libctf-nobfd0_2.43-2 libctf0_2.43-2 libdb5.3t64_5.3.28+dfsg2-7 libdebconfclient0_0.272 libdebhelper-perl_13.16 libdebian-dpkgcross-perl_2.6.20 libdpkg-perl_1.22.11 libdrm-amdgpu1_2.4.122-1 libdrm-common_2.4.122-1 libdrm-radeon1_2.4.122-1 libdrm2_2.4.122-1 libedit2_3.1-20240517-1 libelf1t64_0.191-2 libevent-2.1-7t64_2.1.12-stable-10 libexpat1_2.6.2-1 libexpat1-dev_2.6.2-1 libfakeroot_1.35.1-1 libffi8_3.4.6-1 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.14.0-1 libfile-which-perl_1.27-2 libfontconfig-dev_2.15.0-1.1 libfontconfig1_2.15.0-1.1 libfontconfig1-dev_2.15.0-1.1 libfreetype-dev_2.13.2+dfsg-1+b4 libfreetype6_2.13.2+dfsg-1+b4 libgcc-14-dev_14.2.0-2 libgcc-14-dev-armel-cross_14.2.0-1cross1 libgcc-s1_14.2.0-2 libgcc-s1-armel-cross_14.2.0-1cross1 libgcrypt20_1.11.0-6 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgl-dev_1.7.0-1+b1 libgl1_1.7.0-1+b1 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libxmu6_2:1.1.3-3+b2 libxrender-dev_1:0.9.10-1.1+b1 libxrender1_1:0.9.10-1.1+b1 libxshmfence1_1.3-1+b1 libxt-dev_1:1.2.1-1.2 libxt6t64_1:1.2.1-1.2 libxxf86vm1_1:1.1.4-1+b2 libxxhash0_0.8.2-2+b1 libyaml-perl_1.31-1 libz3-4_4.8.12-3.1+b2 libzstd1_1.5.6+dfsg-1 linux-libc-dev_6.10.3-1 login_1:4.16.0-2+really2.40.2-6 login.defs_1:4.16.0-4 m4_1.4.19-4 make_4.3-4.1 man-db_2.12.1-3 mawk_1.3.4.20240622-2 mount_2.40.2-6 ncurses-base_6.5-2 ncurses-bin_6.5-2 nettle-dev_3.10-1 passwd_1:4.16.0-4 patch_2.7.6-7 perl_5.38.2-5 perl-base_5.38.2-5 perl-modules-5.38_5.38.2-5 pkgconf_1.8.1-3 pkgconf-bin_1.8.1-3 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.24 sysvinit-utils_3.10-1 tar_1.35+dfsg-3 tzdata_2024a-4 ucf_3.0043+nmu1 uil_2.3.8-3.1 usr-is-merged_39 util-linux_2.40.2-6 uuid-dev_2.40.2-6 x11-common_1:7.7+23.1 x11proto-dev_2024.1-1 xorg-sgml-doctools_1:1.11-1.1 xtrans-dev_1.4.0-1 xz-utils_5.6.2-2 zlib1g_1:1.3.dfsg+really1.3.1-1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: ncbi-tools6 Binary: libncbi6t64, libncbi6-dev, ncbi-data, ncbi-rrna-data, ncbi-tools-bin, ncbi-tools-x11, ncbi-cn3d, libvibrant6t64, libvibrant6-dev Architecture: any all Version: 6.1.20170106+dfsg2-3 Maintainer: Debian Med Packaging Team Uploaders: Aaron M. Ucko Homepage: https://www.ncbi.nlm.nih.gov/IEB/ToolBox/ Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/ncbi-tools6 Vcs-Git: https://salsa.debian.org/med-team/ncbi-tools6.git Testsuite: autopkgtest Testsuite-Triggers: netcat Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13) Build-Depends-Arch: csh | c-shell, libglu1-mesa-dev | libglu-dev, libgnutls28-dev | gnutls-dev, libmotif-dev, libpcre3-dev, libpng-dev, libxmu-dev Build-Depends-Indep: icoutils, imagemagick Package-List: libncbi6-dev deb libdevel optional arch=any libncbi6t64 deb libs optional arch=any libvibrant6-dev deb libdevel optional arch=any libvibrant6t64 deb libs optional arch=any ncbi-cn3d deb science optional arch=any ncbi-data deb libs optional arch=all ncbi-rrna-data deb science optional arch=all ncbi-tools-bin deb science optional arch=any ncbi-tools-x11 deb science optional arch=any Checksums-Sha1: 91f3ccb97e8bf8d1451905b5e921cc457ffb9a26 65651864 ncbi-tools6_6.1.20170106+dfsg2.orig.tar.xz 50da4c067e584698e2d93e5f5a64384a1050f99a 1515436 ncbi-tools6_6.1.20170106+dfsg2-3.debian.tar.xz Checksums-Sha256: 45969f833173cb5547951b4b3837b052c5b146b39a0e90fc7c2a362d50e0f95c 65651864 ncbi-tools6_6.1.20170106+dfsg2.orig.tar.xz 461f65a681d66923a0d2f504e700996b21d9fb66975ddc1e9dda6634ff4bd6c3 1515436 ncbi-tools6_6.1.20170106+dfsg2-3.debian.tar.xz Files: b457563e22990fc471acf8ff8a171f71 65651864 ncbi-tools6_6.1.20170106+dfsg2.orig.tar.xz 70312c765babe3343d17de1c431650a9 1515436 ncbi-tools6_6.1.20170106+dfsg2-3.debian.tar.xz Dgit: 171835e81a1b7968bd3fe876d756711af0e0126d debian archive/debian/6.1.20170106+dfsg2-3 https://git.dgit.debian.org/ncbi-tools6 -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEfDq5z9IwvTDdAJxZHnCRsfFKZKIFAmahtQoACgkQHnCRsfFK ZKLWEg//ShefJDOeNDn8dr7TKJWimjn0muhXovBW36CfAiOraQr7q1icCcJSwEAj ZUVYHo0+StS8N+Vsu5/XNu9htVEI9SJxH2srs52//fecq6TpOD+9cFbqcDlL1LaQ 0xNVFSBCYyYne84tEnaCtDKGAwAAazjoBsRD4ugiBnFGnmjSNZGswm56hQVsLzal tDPfD8heDqHLJSTqOtmRL41MHzqOKRaPFV7zOwCOYe5ttvHI4iC/KnOBAZEzQRby qcCgyY6wIm/iRTeANbBd1Fo29h4Od6edf9Bu/mvWVxyEJA3M2JYlr1b+A/NHfLi1 Jp785IXY1d4ACLgMoeYmeHAmWVUCgjJTeXN9A04YwQYGL5o2bQCQw0LB+NI5tXq7 uLOmRFk93K99HsXqNdZa+ABt3uUcvZ+eGFIWcU04I0bXGnmuT9SwxFSCqvjrmY36 AMmfaUrZq9BWnarHkCF84q+Uy+3OwI8hfsWq9WfM75MGIJSVwZk3feiv09I2W5UZ 9cokcXvXzFCug0uaQFCMDqUVUyymvtYeZXcjydyfT+zhPvMKcPA7sXIsdrCzmrz4 dhadOwj1vlzbPjXS8q+ev/ukh7RsYVgQbfizVx8G2lLFf53GDvrVm46R3ZUS95Pw AbwVLtL4Q1COahNKL2ZT3cWUSANjOrT2B1FXQPd6i1YzZw8LBYY= =foDW -----END PGP SIGNATURE----- gpgv: Signature made Thu Jul 25 02:14:34 2024 UTC gpgv: using RSA key 7C3AB9CFD230BD30DD009C591E7091B1F14A64A2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./ncbi-tools6_6.1.20170106+dfsg2-3.dsc: no acceptable signature found dpkg-source: info: extracting ncbi-tools6 in /<> dpkg-source: info: unpacking ncbi-tools6_6.1.20170106+dfsg2.orig.tar.xz dpkg-source: info: unpacking ncbi-tools6_6.1.20170106+dfsg2-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying debian-changes Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.aFsPMLL2cq/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-fbf25181-3b81-4cea-82be-e60820c7cbbd SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa XDG_SESSION_CLASS=user dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aarmel -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package ncbi-tools6 dpkg-buildpackage: info: source version 6.1.20170106+dfsg2-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Aaron M. Ucko dpkg-architecture: warning: specified GNU system type arm-linux-gnueabi does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armel dpkg-source: info: using options from ncbi-tools6-6.1.20170106+dfsg2/debian/source/options: --single-debian-patch debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' rm -rf build/* bin/* include/* lib/* shlib mkdir -p build bin include lib rm -f debian/*.menu debian/asntool.xpm debian/ncbilogo.xpm chmod -x debian/makemenu debian/installman make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_build-arch make[1]: Entering directory '/<>' cd build && ln -s ../make/*.unx . ln -s ../make/ln-if-absent build mv build/makeall.unx build/makefile /usr/bin/make -C build all LCL=lnx CC="arm-linux-gnueabi-gcc" LDFLAGS1="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,-rpath-link,../shlib" RAN="ranlib" OTHERLIBS="-lm" VIBLIBS="-lXm -lXmu -lXt -lX11 " VIBFLAG="-DWIN_MOTIF" GNUTLS_INCLUDE=-DHAVE_LIBGNUTLS NCBI_LINKINGLIBDIR="../shlib" \ CFLAGS1="-c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG" \ LIB4=libvibrant.a LIB20=libncbidesk.a LIB28=libvibgif.a \ LIB30=libncbicn3d.a LIB45=libddvlib.a LIB400=libvibrantOGL.a LIB3000=libncbicn3dOGL.a make[2]: Entering directory '/<>/build' chmod -R ug+rw,o+r . ../include ./ln-if-absent ../corelib/tsprintf.h ../include ./ln-if-absent ../corelib/gifgen.h ../include ./ln-if-absent ../corelib/ncbi*.h ../include ./ln-if-absent ../corelib/tree*.h ../include ./ln-if-absent ../corelib/regex.h ../include ./ln-if-absent ../corelib/matrix.h ../include ./ln-if-absent ../corelib/binary.h ../include ./ln-if-absent ../corelib/morefile/*.h ../include ./ln-if-absent ../corelib/morefile/*.c . ./ln-if-absent ../link/macmet/MoreCarbonAccessors.h ../include ./ln-if-absent ../corelib/ncbilcl.lnx ../include/ncbilcl.h ./ln-if-absent ../corelib/*.c . ./ln-if-absent ../corelib/core*.h . ./ln-if-absent ../asnlib/*.h . rm -f ../include/asn.h mv asn.h ../include ./ln-if-absent ../asnlib/*.c . ./ln-if-absent ../connect/*.c . ./ln-if-absent ../connect/ncbi_ansi_ext.h . ./ln-if-absent ../connect/ncbi_assert.h . ./ln-if-absent ../connect/ncbi_priv.h . ./ln-if-absent ../connect/ncbi_comm.h . ./ln-if-absent ../connect/ncbi_config.h . ./ln-if-absent ../connect/ncbi_connssl.h . ./ln-if-absent ../connect/ncbi_lbos.h . ./ln-if-absent ../connect/ncbi_lbosp.h . ./ln-if-absent ../connect/parson.h . ./ln-if-absent ../connect/ncbi_lbsm.h . make[2]: [makefile:714: copy] Error 1 (ignored) ./ln-if-absent ../connect/ncbi_lbsm_ipc.h . make[2]: [makefile:715: copy] Error 1 (ignored) ./ln-if-absent ../connect/ncbi_host_infop.h . ./ln-if-absent ../connect/ncbi_server_infop.h . ./ln-if-absent ../connect/ncbi_servicep.h . ./ln-if-absent ../connect/ncbi_socketp.h . ./ln-if-absent ../connect/ncbi_dispd.h . ./ln-if-absent ../connect/ncbi_lbsmd.h . ./ln-if-absent ../connect/ncbi_local.h . ./ln-if-absent ../connect/ncbi_lb.h . ./ln-if-absent ../connect/ncbi_version.h . ./ln-if-absent ../connect/ncbi_base64.h . ./ln-if-absent ../connect/urlquery.h ../include mkdir ../include/connect chmod ug+rw,o+r ../include/connect cp -fp ../connect/ncbi_*.h ../connect/connect_export.h ../include/connect ./ln-if-absent ../util/tables/*.c . mkdir -p ../include/util/tables cp -fp ../util/tables/*.h ../include/util/tables ./ln-if-absent ../util/creaders/*.c . mkdir -p ../include/util/creaders cp -fp ../util/creaders/*.h ../include/util/creaders ./ln-if-absent ../ctools/*.c . ./ln-if-absent ../ctools/*.h . mkdir ../include/ctools chmod ug+rw,o+r ../include/ctools cp -fp ../ctools/*.h ../include/ctools ./ln-if-absent ../object/*.c . ./ln-if-absent ../object/*.h ../include ./ln-if-absent ../access/*.c . ./ln-if-absent ../access/*.h ../include ./ln-if-absent ../asnstat/*.h ../include ./ln-if-absent ../api/*.h ../include ./ln-if-absent ../api/*.c . ./ln-if-absent ../api/*.inc . ./ln-if-absent ../cdromlib/*.h ../include ./ln-if-absent ../cdromlib/*.c . ./ln-if-absent ../vibrant/*.h ../include ./ln-if-absent ../vibrant/*.c . ./ln-if-absent ../desktop/*.h ../include ./ln-if-absent ../desktop/*.c . ./ln-if-absent ../biostruc/*.h ../include ./ln-if-absent ../biostruc/*.c . ./ln-if-absent ../biostruc/cdd/*.h ../include ./ln-if-absent ../biostruc/cdd/*.c . ./ln-if-absent ../biostruc/cn3d/*.h ../include ./ln-if-absent ../biostruc/cn3d/*.c . ./ln-if-absent ../tools/*.h ../include ./ln-if-absent ../tools/*.c . ./ln-if-absent ../cn3d/*.h ../include ./ln-if-absent ../cn3d/*.c . ./ln-if-absent ../gif/*.c . ./ln-if-absent ../gif/*.h ../include ./ln-if-absent ../ddv/*.h ../include ./ln-if-absent ../ddv/*.c . ./ln-if-absent ../regexp/*.c . ./ln-if-absent ../regexp/*.h ../include ./ln-if-absent ../internal/compr/*.c . set: No match. make[2]: [makefile:771: copy] Error 1 (ignored) ./ln-if-absent ../internal/compr/*.h ../include set: No match. make[2]: [makefile:772: copy] Error 1 (ignored) ./ln-if-absent ../internal/libindx/*.c . set: No match. make[2]: [makefile:773: copy] Error 1 (ignored) ./ln-if-absent ../internal/libindx/*.h ../include set: No match. make[2]: [makefile:774: copy] Error 1 (ignored) ./ln-if-absent ../internal/libpars/*.c . set: No match. make[2]: [makefile:775: copy] Error 1 (ignored) ./ln-if-absent ../internal/libpars/*.h ../include set: No match. make[2]: [makefile:776: copy] Error 1 (ignored) ./ln-if-absent ../internal/ideogram/*.c . set: No match. make[2]: [makefile:777: copy] Error 1 (ignored) ./ln-if-absent ../internal/ideogram/*.dat . set: No match. make[2]: [makefile:778: copy] Error 1 (ignored) ./ln-if-absent ../internal/ideogram/ideochr*.h ../include set: No match. make[2]: [makefile:779: copy] Error 1 (ignored) ./ln-if-absent ../internal/ideogram/ideoorgs.h . make[2]: [makefile:780: copy] Error 1 (ignored) ./ln-if-absent ../internal/ccap/*.c . set: No match. make[2]: [makefile:781: copy] Error 1 (ignored) ./ln-if-absent ../internal/ccap/*.dat . set: No match. make[2]: [makefile:782: copy] Error 1 (ignored) ./ln-if-absent ../internal/ccap/*.h ../include set: No match. make[2]: [makefile:783: copy] Error 1 (ignored) ./ln-if-absent ncbidraw.c ncbidrwg.c ./ln-if-absent ncbithr.c ncbithrs.c ./ln-if-absent ../network/nsclilib/*.h ../include ./ln-if-absent ../network/blast3/client/*.h ../include ./ln-if-absent ../network/id1arch/*.h ../include ./ln-if-absent ../network/id2arch/*.h ../include mkdir -p ../include/algo/blast/core ./ln-if-absent ../algo/blast/core/*.c . ./ln-if-absent ../algo/blast/core/*.h . ./ln-if-absent ../algo/blast/core/*.inl . cp -fp ../algo/blast/core/*.h ../include/algo/blast/core mkdir -p ../include/algo/blast/composition_adjustment ./ln-if-absent ../algo/blast/composition_adjustment/*.c . cp -fp ../algo/blast/composition_adjustment/*.h \ ../include/algo/blast/composition_adjustment mkdir -p ../include/algo/blast/api ./ln-if-absent ../algo/blast/api/*.c . cp -fp ../algo/blast/api/*.h ../include/algo/blast/api chmod -R ug+rw,o+r . echo Waiting...go Waiting...go arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbithr.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbistd.h:61, from ncbithr.c:289: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ncbithr.c: In function ‘s_TlsDestroyAll’: ncbithr.c:2529:11: warning: variable ‘err_code’ set but not used [-Wunused-but-set-variable] 2529 | int err_code = 0; | ^~~~~~~~ cp -p ncbithr.o ../lib arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbimain.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ncbimain.c:56: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbibs.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ncbibs.c:55: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ncbibs.c: In function ‘Nlm_BSSeek’: ncbibs.c:448:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 448 | if (sp == bsp->seekptr) /* already in right position */ | ^~ ncbibs.c:451:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 451 | bsp->seekptr = sp; | ^~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF wwwutils.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/ncbiwww.h:106, from wwwutils.c:150: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbierr.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from corepriv.h:85, from ncbierr.c:235: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ncbierr.c: In function ‘Nlm_ErrGetLogfile’: ncbierr.c:1380:21: warning: the comparison will always evaluate as ‘true’ for the address of ‘logfile’ will never be NULL [-Waddress] 1380 | if (info->logfile != NULL && *info->logfile == '\0') | ^~ ncbierr.c:253:15: note: ‘logfile’ declared here 253 | char logfile[PATH_MAX]; | ^~~~~~~ In file included from /usr/arm-linux-gnueabi/include/string.h:548, from ../include/ncbilcl.h:156: In function ‘strncat’, inlined from ‘ErrMsgRoot_fopen’ at ncbierr.c:955:13: /usr/arm-linux-gnueabi/include/bits/string_fortified.h:138:10: warning: ‘__builtin___strncat_chk’ specified bound 4096 equals destination size [-Wstringop-overflow=] 138 | return __builtin___strncat_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbienv.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from corepriv.h:85, from ncbienv.c:310: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from ../include/ncbi.h:62: ncbienv.c: In function ‘Nlm_WorkGetAppParam’: ../include/ncbistr.h:281:25: warning: ‘__builtin_strncpy’ specified bound depends on the length of the source argument [-Wstringop-truncation] 281 | #define Nlm_StrNCpy strncpy | ^~~~~~~ ../include/ncbistr.h:307:18: note: in expansion of macro ‘Nlm_StrNCpy’ 307 | #define StrNCpy Nlm_StrNCpy | ^~~~~~~~~~~ ncbienv.c:466:11: note: in expansion of macro ‘StrNCpy’ 466 | StrNCpy(&buf[totlen], eip->name, bytesToAppend - 1); | ^~~~~~~ ../include/ncbistr.h:279:25: note: length computed here 279 | #define Nlm_StrLen strlen ../include/ncbistr.h:305:18: note: in expansion of macro ‘Nlm_StrLen’ 305 | #define StrLen Nlm_StrLen | ^~~~~~~~~~ ncbienv.c:464:36: note: in expansion of macro ‘StrLen’ 464 | Nlm_Int2 bytesToAppend = StrLen(eip->name) + 1; | ^~~~~~ ncbienv.c: In function ‘Nlm_TransientLookup.constprop’: ../include/ncbistr.h:281:25: warning: ‘__builtin_strncpy’ specified bound depends on the length of the source argument [-Wstringop-truncation] 281 | #define Nlm_StrNCpy strncpy | ^~~~~~~ ../include/ncbistr.h:307:18: note: in expansion of macro ‘Nlm_StrNCpy’ 307 | #define StrNCpy Nlm_StrNCpy | ^~~~~~~~~~~ ncbienv.c:1788:15: note: in expansion of macro ‘StrNCpy’ 1788 | StrNCpy(&buf[totlen], eip->name, bytesToAppend); | ^~~~~~~ ../include/ncbistr.h:279:25: note: length computed here 279 | #define Nlm_StrLen strlen ../include/ncbistr.h:305:18: note: in expansion of macro ‘Nlm_StrLen’ 305 | #define StrLen Nlm_StrLen | ^~~~~~~~~~ ncbienv.c:1786:31: note: in expansion of macro ‘StrLen’ 1786 | bytesToAppend = StrLen(eip->name) + 1; | ^~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbifile.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbifile.c:48: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbiprop.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from corepriv.h:85, from ncbiprop.c:104: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbimath.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/ncbimath.h:69, from ncbimath.c:90: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbimem.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ncbimem.c:46: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbimisc.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ncbimisc.c:45: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ncbimisc.c: In function ‘Nlm_MD5Final’: ncbimisc.c:2250:26: warning: argument to ‘sizeof’ in ‘memset’ call is the same expression as the destination; did you mean to dereference it? [-Wsizeof-pointer-memaccess] 2250 | memset(ctx, 0, sizeof(ctx)); /* In case it's sensitive */ | ^ ncbimisc.c: In function ‘XmlPathSuffixIs’: ncbimisc.c:2966:58: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 2966 | if (StringHasNoText (parentFilter) || parent != NULL && StringICmp (parent->name, parentFilter) == 0) { | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbimsg.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from corepriv.h:85, from ncbimsg.c:167: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbistr.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ncbistr.c:45: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbisgml.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ncbisgml.c:83: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ncbisgml.c: In function ‘Nlm_Sgml2Ascii’: ncbisgml.c:292:33: warning: ‘__builtin___strncat_chk’ specified bound 100 equals destination size [-Wstringop-truncation] 292 | strncat(bad,sgml,SGML_ERROR_MSG_LIM); | ^ ncbisgml.c:273:33: warning: ‘__builtin___strncat_chk’ specified bound 100 equals destination size [-Wstringop-truncation] 273 | strncat(bad,sgml,SGML_ERROR_MSG_LIM); | ^ In file included from /usr/arm-linux-gnueabi/include/string.h:548, from ../include/ncbilcl.h:156: In function ‘strncat’, inlined from ‘Nlm_Sgml2Ascii’ at ncbisgml.c:273:5: /usr/arm-linux-gnueabi/include/bits/string_fortified.h:138:10: warning: ‘__builtin___strncat_chk’ specified bound 100 equals destination size [-Wstringop-overflow=] 138 | return __builtin___strncat_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncat’, inlined from ‘Nlm_Sgml2Ascii’ at ncbisgml.c:292:5: /usr/arm-linux-gnueabi/include/bits/string_fortified.h:138:10: warning: ‘__builtin___strncat_chk’ specified bound 100 equals destination size [-Wstringop-overflow=] 138 | return __builtin___strncat_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ ncbisgml.c: In function ‘Nlm_Sgml2AsciiLen’: ncbisgml.c:362:33: warning: ‘__builtin___strncat_chk’ specified bound 100 equals destination size [-Wstringop-truncation] 362 | strncat(bad,sgml,SGML_ERROR_MSG_LIM); | ^ ncbisgml.c:348:33: warning: ‘__builtin___strncat_chk’ specified bound 100 equals destination size [-Wstringop-truncation] 348 | strncat(bad,sgml,SGML_ERROR_MSG_LIM); | ^ In function ‘strncat’, inlined from ‘Nlm_Sgml2AsciiLen’ at ncbisgml.c:348:5: /usr/arm-linux-gnueabi/include/bits/string_fortified.h:138:10: warning: ‘__builtin___strncat_chk’ specified bound 100 equals destination size [-Wstringop-overflow=] 138 | return __builtin___strncat_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncat’, inlined from ‘Nlm_Sgml2AsciiLen’ at ncbisgml.c:362:5: /usr/arm-linux-gnueabi/include/bits/string_fortified.h:138:10: warning: ‘__builtin___strncat_chk’ specified bound 100 equals destination size [-Wstringop-overflow=] 138 | return __builtin___strncat_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbitime.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ncbitime.c:77: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbilang.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ncbilang.c:57: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asnbufo.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from asnbufo.c:62: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asndebin.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from asnbuild.h:70, from asndebin.c:45: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ asndebin.c: In function ‘AsnBinReadVal’: asndebin.c:565:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 565 | else | ^~~~ asndebin.c:568:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 568 | if (atp == NULL) | ^~ asndebin.c:634:41: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 634 | else /* empty sequence written */ | ^~~~ asndebin.c:636:49: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 636 | while (atp2 != NULL) | ^~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asnenbin.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from asnbuild.h:70, from asnenbin.c:45: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asngen.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from asnbuild.h:70, from asngen.c:80: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ asngen.c: In function ‘AsnFindNthPieceOfObject’: asngen.c:540:16: warning: variable ‘aeop’ set but not used [-Wunused-but-set-variable] 540 | AsnExpOptPtr aeop; | ^~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asnio.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from asnbuild.h:70, from asnio.c:54: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ asnio.c: In function ‘AsnIoWriteBlock’: asnio.c:698:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 698 | else /* use alternative write function */ | ^~~~ asnio.c:701:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 701 | if (retval != bytes_to_write) | ^~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asnlex.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from asnbuild.h:70, from asnlex.c:52: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ asnlex.c: In function ‘AsnTxtReadId’: asnlex.c:198:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 198 | if ((token == END_STRUCT) && ((isa == SEQ_TYPE) || (isa == SET_TYPE))) | ^~ asnlex.c:201:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 201 | if (token != IDENT) | ^~ asnlex.c: In function ‘AsnTxtReadVal’: asnlex.c:345:41: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 345 | else /* empty sequence written */ | ^~~~ asnlex.c:347:49: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 347 | while (atp2 != NULL) | ^~~~~ asnlex.c: At top level: asnlex.c:1290:13: warning: ‘AsnLexWordUTF8’ defined but not used [-Wunused-function] 1290 | static Int2 AsnLexWordUTF8 (AsnIoPtr aip) | ^~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asnlext.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from asnbuild.h:70, from asnlext.c:57: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asnout.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from asnbuild.h:70, from asnout.c:79: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ asnout.c: In function ‘AsnOutput’: asnout.c:159:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 159 | else | ^~~~ asnout.c:162:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 162 | for (i = 0; i < 12; i++) | ^~~ asnout.c:213:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 213 | if (! loader) | ^~ asnout.c:216:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 216 | attvp = p.root_tmpvalue.next; | ^~~~~ asnout.c:270:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 270 | if (! loader) | ^~ asnout.c:273:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 273 | attp = p.root_tmptype.next; | ^~~~ asnout.c:450:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 450 | if (! loader) | ^~ asnout.c:453:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 453 | i = 1; | ^ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asnprint.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from asnbuild.h:70, from asnprint.c:53: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ asnprint.c: In function ‘GetXMLModuleName’: asnprint.c:102:9: warning: statement with no effect [-Wunused-value] 102 | for (currmod; currmod != NULL; currmod = currmod->next) | ^~~ asnprint.c: In function ‘AsnPrintCloseStruct’: asnprint.c:1774:14: warning: variable ‘isa’ set but not used [-Wunused-but-set-variable] 1774 | Int2 isa; | ^~~ asnprint.c: In function ‘AsnPrintModuleXMLInc’: asnprint.c:2095:17: warning: variable ‘ptr’ set but not used [-Wunused-but-set-variable] 2095 | CharPtr ptr; | ^~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asntypes.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from asnbuild.h:70, from asntypes.c:111: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ asntypes.c: In function ‘AsnEnumTypeStr’: asntypes.c:1383:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1383 | if ((atp->type->isa != ENUM_TYPE) && (atp->type->isa != INTEGER_TYPE)) | ^~ asntypes.c:1386:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1386 | avnp = (AsnValxNodePtr) atp->branch; | ^~~~ asntypes.c: In function ‘AsnTreeLoad’: asntypes.c:1274:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1274 | fscanf(fp, "%d %d %d", &numval, &numtype, &nummod); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ asntypes.c:1288:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1288 | fscanf(fp, "%d %s %ld %lf %d", &isa, name, &intvalue, &realvalue, &next); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ asntypes.c:1301:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1301 | fscanf(fp, "%d %s %d %d %d %d %d %d %d %d %d %d %d", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1302 | &isa, name, &tagclass, &tagnumber, bools, bools+1, bools+2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1303 | bools+3, bools+4, &defaultvalue, &type, &branch, &next); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ asntypes.c:1333:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1333 | fscanf(fp, "%s %s %d %d", name, fname, &type, &next); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asngenob.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from asngenob.c:72: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF gifgen.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from gifgen.c:137: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF togif.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from togif.c:111: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ togif.c: In function ‘gdImageCreateFromGif’: togif.c:961:12: warning: variable ‘AspectRatio’ set but not used [-Wunused-but-set-variable] 961 | int AspectRatio; | ^~~~~~~~~~~ togif.c:960:12: warning: variable ‘Background’ set but not used [-Wunused-but-set-variable] 960 | int Background; | ^~~~~~~~~~ togif.c:959:12: warning: variable ‘ColorResolution’ set but not used [-Wunused-but-set-variable] 959 | int ColorResolution; | ^~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -DNCBI_NOTHREADS_AVAIL -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbithrs.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbistd.h:61, from ncbithrs.c:289: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ncbithrs.c: In function ‘s_TlsDestroyAll’: ncbithrs.c:2529:11: warning: unused variable ‘err_code’ [-Wunused-variable] 2529 | int err_code = 0; | ^~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -DHAVE_STRING_H -DREGEX_MALLOC regex.c regex.c: In function ‘re_match_2’: regex.c:2368:11: warning: unused variable ‘destination’ [-Wunused-variable] 2368 | char *destination; \ | ^~~~~~~~~~~ regex.c:3768:19: note: in expansion of macro ‘PUSH_FAILURE_POINT’ 3768 | PUSH_FAILURE_POINT (p1 + mcnt, d, -2); | ^~~~~~~~~~~~~~~~~~ regex.c:2368:11: warning: unused variable ‘destination’ [-Wunused-variable] 2368 | char *destination; \ | ^~~~~~~~~~~ regex.c:3915:11: note: in expansion of macro ‘PUSH_FAILURE_POINT’ 3915 | PUSH_FAILURE_POINT (p + mcnt, NULL, -2); | ^~~~~~~~~~~~~~~~~~ regex.c:2368:11: warning: unused variable ‘destination’ [-Wunused-variable] 2368 | char *destination; \ | ^~~~~~~~~~~ regex.c:3968:11: note: in expansion of macro ‘PUSH_FAILURE_POINT’ 3968 | PUSH_FAILURE_POINT (p + mcnt, d, -2); | ^~~~~~~~~~~~~~~~~~ regex.c:4071:25: warning: variable ‘sdummy’ set but not used [-Wunused-but-set-variable] 4071 | const char *sdummy; | ^~~~~~ regex.c:4070:28: warning: variable ‘pdummy’ set but not used [-Wunused-but-set-variable] 4070 | unsigned char *pdummy; | ^~~~~~ regex.c:2368:11: warning: unused variable ‘destination’ [-Wunused-variable] 2368 | char *destination; \ | ^~~~~~~~~~~ regex.c:4107:11: note: in expansion of macro ‘PUSH_FAILURE_POINT’ 4107 | PUSH_FAILURE_POINT (0, 0, -2); | ^~~~~~~~~~~~~~~~~~ regex.c:2368:11: warning: unused variable ‘destination’ [-Wunused-variable] 2368 | char *destination; \ | ^~~~~~~~~~~ regex.c:4120:11: note: in expansion of macro ‘PUSH_FAILURE_POINT’ 4120 | PUSH_FAILURE_POINT (0, 0, -2); | ^~~~~~~~~~~~~~~~~~ regex.c: In function ‘regex_compile’: regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1221:15: note: in expansion of macro ‘BUF_PUSH’ 1221 | BUF_PUSH (begline); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1221:15: note: in expansion of macro ‘BUF_PUSH’ 1221 | BUF_PUSH (begline); | ^~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1221:15: note: in expansion of macro ‘BUF_PUSH’ 1221 | BUF_PUSH (begline); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1221:15: note: in expansion of macro ‘BUF_PUSH’ 1221 | BUF_PUSH (begline); | ^~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1221:15: note: in expansion of macro ‘BUF_PUSH’ 1221 | BUF_PUSH (begline); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1221:15: note: in expansion of macro ‘BUF_PUSH’ 1221 | BUF_PUSH (begline); | ^~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1221:15: note: in expansion of macro ‘BUF_PUSH’ 1221 | BUF_PUSH (begline); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1221:15: note: in expansion of macro ‘BUF_PUSH’ 1221 | BUF_PUSH (begline); | ^~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1236:16: note: in expansion of macro ‘BUF_PUSH’ 1236 | BUF_PUSH (endline); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1236:16: note: in expansion of macro ‘BUF_PUSH’ 1236 | BUF_PUSH (endline); | ^~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1236:16: note: in expansion of macro ‘BUF_PUSH’ 1236 | BUF_PUSH (endline); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1236:16: note: in expansion of macro ‘BUF_PUSH’ 1236 | BUF_PUSH (endline); | ^~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1236:16: note: in expansion of macro ‘BUF_PUSH’ 1236 | BUF_PUSH (endline); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1236:16: note: in expansion of macro ‘BUF_PUSH’ 1236 | BUF_PUSH (endline); | ^~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1236:16: note: in expansion of macro ‘BUF_PUSH’ 1236 | BUF_PUSH (endline); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1236:16: note: in expansion of macro ‘BUF_PUSH’ 1236 | BUF_PUSH (endline); | ^~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1329:17: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1329 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1329:17: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1329 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1329:17: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1329 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1329:17: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1329 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1329:17: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1329 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1329:17: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1329 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1329:17: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1329 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1329:17: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1329 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1354:13: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1354 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1354:13: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1354 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1354:13: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1354 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1354:13: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1354 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1354:13: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1354 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1354:13: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1354 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1354:13: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1354 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1354:13: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1354 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1368:17: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1368 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1368:17: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1368 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1368:17: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1368 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1368:17: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1368 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1368:17: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1368 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1368:17: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1368 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1378:11: note: in expansion of macro ‘BUF_PUSH’ 1378 | BUF_PUSH (anychar); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1378:11: note: in expansion of macro ‘BUF_PUSH’ 1378 | BUF_PUSH (anychar); | ^~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1378:11: note: in expansion of macro ‘BUF_PUSH’ 1378 | BUF_PUSH (anychar); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1378:11: note: in expansion of macro ‘BUF_PUSH’ 1378 | BUF_PUSH (anychar); | ^~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1378:11: note: in expansion of macro ‘BUF_PUSH’ 1378 | BUF_PUSH (anychar); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1378:11: note: in expansion of macro ‘BUF_PUSH’ 1378 | BUF_PUSH (anychar); | ^~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1378:11: note: in expansion of macro ‘BUF_PUSH’ 1378 | BUF_PUSH (anychar); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1378:11: note: in expansion of macro ‘BUF_PUSH’ 1378 | BUF_PUSH (anychar); | ^~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1390:13: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1390 | GET_BUFFER_SPACE (34); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1390:13: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1390 | GET_BUFFER_SPACE (34); | ^~~~~~~~~~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1390:13: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1390 | GET_BUFFER_SPACE (34); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1390:13: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1390 | GET_BUFFER_SPACE (34); | ^~~~~~~~~~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1390:13: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1390 | GET_BUFFER_SPACE (34); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1390:13: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1390 | GET_BUFFER_SPACE (34); | ^~~~~~~~~~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1396:13: note: in expansion of macro ‘BUF_PUSH’ 1396 | BUF_PUSH (*p == '^' ? charset_not : charset); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1396:13: note: in expansion of macro ‘BUF_PUSH’ 1396 | BUF_PUSH (*p == '^' ? charset_not : charset); | ^~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1396:13: note: in expansion of macro ‘BUF_PUSH’ 1396 | BUF_PUSH (*p == '^' ? charset_not : charset); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1396:13: note: in expansion of macro ‘BUF_PUSH’ 1396 | BUF_PUSH (*p == '^' ? charset_not : charset); | ^~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1396:13: note: in expansion of macro ‘BUF_PUSH’ 1396 | BUF_PUSH (*p == '^' ? charset_not : charset); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1396:13: note: in expansion of macro ‘BUF_PUSH’ 1396 | BUF_PUSH (*p == '^' ? charset_not : charset); | ^~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1396:13: note: in expansion of macro ‘BUF_PUSH’ 1396 | BUF_PUSH (*p == '^' ? charset_not : charset); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1396:13: note: in expansion of macro ‘BUF_PUSH’ 1396 | BUF_PUSH (*p == '^' ? charset_not : charset); | ^~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1404:13: note: in expansion of macro ‘BUF_PUSH’ 1404 | BUF_PUSH ((1 << BYTEWIDTH) / BYTEWIDTH); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1404:13: note: in expansion of macro ‘BUF_PUSH’ 1404 | BUF_PUSH ((1 << BYTEWIDTH) / BYTEWIDTH); | ^~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1404:13: note: in expansion of macro ‘BUF_PUSH’ 1404 | BUF_PUSH ((1 << BYTEWIDTH) / BYTEWIDTH); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1404:13: note: in expansion of macro ‘BUF_PUSH’ 1404 | BUF_PUSH ((1 << BYTEWIDTH) / BYTEWIDTH); | ^~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1404:13: note: in expansion of macro ‘BUF_PUSH’ 1404 | BUF_PUSH ((1 << BYTEWIDTH) / BYTEWIDTH); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1404:13: note: in expansion of macro ‘BUF_PUSH’ 1404 | BUF_PUSH ((1 << BYTEWIDTH) / BYTEWIDTH); | ^~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1404:13: note: in expansion of macro ‘BUF_PUSH’ 1404 | BUF_PUSH ((1 << BYTEWIDTH) / BYTEWIDTH); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1404:13: note: in expansion of macro ‘BUF_PUSH’ 1404 | BUF_PUSH ((1 << BYTEWIDTH) / BYTEWIDTH); | ^~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:930:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 930 | GET_BUFFER_SPACE (3); \ | ^~~~~~~~~~~~~~~~ regex.c:1640:19: note: in expansion of macro ‘BUF_PUSH_3’ 1640 | BUF_PUSH_3 (start_memory, regnum, 0); | ^~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:930:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 930 | GET_BUFFER_SPACE (3); \ | ^~~~~~~~~~~~~~~~ regex.c:1640:19: note: in expansion of macro ‘BUF_PUSH_3’ 1640 | BUF_PUSH_3 (start_memory, regnum, 0); | ^~~~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1672:19: note: in expansion of macro ‘BUF_PUSH’ 1672 | BUF_PUSH (push_dummy_failure); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1672:19: note: in expansion of macro ‘BUF_PUSH’ 1672 | BUF_PUSH (push_dummy_failure); | ^~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1672:19: note: in expansion of macro ‘BUF_PUSH’ 1672 | BUF_PUSH (push_dummy_failure); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1672:19: note: in expansion of macro ‘BUF_PUSH’ 1672 | BUF_PUSH (push_dummy_failure); | ^~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1672:19: note: in expansion of macro ‘BUF_PUSH’ 1672 | BUF_PUSH (push_dummy_failure); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1672:19: note: in expansion of macro ‘BUF_PUSH’ 1672 | BUF_PUSH (push_dummy_failure); | ^~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1672:19: note: in expansion of macro ‘BUF_PUSH’ 1672 | BUF_PUSH (push_dummy_failure); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1672:19: note: in expansion of macro ‘BUF_PUSH’ 1672 | BUF_PUSH (push_dummy_failure); | ^~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:930:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 930 | GET_BUFFER_SPACE (3); \ | ^~~~~~~~~~~~~~~~ regex.c:1718:21: note: in expansion of macro ‘BUF_PUSH_3’ 1718 | BUF_PUSH_3 (stop_memory, this_group_regnum, | ^~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:930:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 930 | GET_BUFFER_SPACE (3); \ | ^~~~~~~~~~~~~~~~ regex.c:1718:21: note: in expansion of macro ‘BUF_PUSH_3’ 1718 | BUF_PUSH_3 (stop_memory, this_group_regnum, | ^~~~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:930:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 930 | GET_BUFFER_SPACE (3); \ | ^~~~~~~~~~~~~~~~ regex.c:1718:21: note: in expansion of macro ‘BUF_PUSH_3’ 1718 | BUF_PUSH_3 (stop_memory, this_group_regnum, | ^~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:930:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 930 | GET_BUFFER_SPACE (3); \ | ^~~~~~~~~~~~~~~~ regex.c:1718:21: note: in expansion of macro ‘BUF_PUSH_3’ 1718 | BUF_PUSH_3 (stop_memory, this_group_regnum, | ^~~~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:930:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 930 | GET_BUFFER_SPACE (3); \ | ^~~~~~~~~~~~~~~~ regex.c:1718:21: note: in expansion of macro ‘BUF_PUSH_3’ 1718 | BUF_PUSH_3 (stop_memory, this_group_regnum, | ^~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:930:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 930 | GET_BUFFER_SPACE (3); \ | ^~~~~~~~~~~~~~~~ regex.c:1718:21: note: in expansion of macro ‘BUF_PUSH_3’ 1718 | BUF_PUSH_3 (stop_memory, this_group_regnum, | ^~~~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1734:15: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1734 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1734:15: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1734 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1734:15: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1734 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1734:15: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1734 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1734:15: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1734 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1734:15: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1734 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1734:15: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1734 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1734:15: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1734 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1762:15: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1762 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1762:15: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1762 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1762:15: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1762 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1762:15: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1762 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1849:22: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1849 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1849:22: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1849 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1849:22: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1849 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1849:22: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1849 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1849:22: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1849 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1849:22: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1849 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1849:22: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1849 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1849:22: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1849 | GET_BUFFER_SPACE (3); | ^~~~~~~~~~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1868:22: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1868 | GET_BUFFER_SPACE (nbytes); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1868:22: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1868 | GET_BUFFER_SPACE (nbytes); | ^~~~~~~~~~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1868:22: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1868 | GET_BUFFER_SPACE (nbytes); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1868:22: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1868 | GET_BUFFER_SPACE (nbytes); | ^~~~~~~~~~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1868:22: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1868 | GET_BUFFER_SPACE (nbytes); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1868:22: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1868 | GET_BUFFER_SPACE (nbytes); | ^~~~~~~~~~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1868:22: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1868 | GET_BUFFER_SPACE (nbytes); | ^~~~~~~~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:1868:22: note: in expansion of macro ‘GET_BUFFER_SPACE’ 1868 | GET_BUFFER_SPACE (nbytes); | ^~~~~~~~~~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1962:15: note: in expansion of macro ‘BUF_PUSH’ 1962 | BUF_PUSH (wordchar); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1962:15: note: in expansion of macro ‘BUF_PUSH’ 1962 | BUF_PUSH (wordchar); | ^~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1962:15: note: in expansion of macro ‘BUF_PUSH’ 1962 | BUF_PUSH (wordchar); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1962:15: note: in expansion of macro ‘BUF_PUSH’ 1962 | BUF_PUSH (wordchar); | ^~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1962:15: note: in expansion of macro ‘BUF_PUSH’ 1962 | BUF_PUSH (wordchar); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1962:15: note: in expansion of macro ‘BUF_PUSH’ 1962 | BUF_PUSH (wordchar); | ^~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1962:15: note: in expansion of macro ‘BUF_PUSH’ 1962 | BUF_PUSH (wordchar); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1962:15: note: in expansion of macro ‘BUF_PUSH’ 1962 | BUF_PUSH (wordchar); | ^~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1968:15: note: in expansion of macro ‘BUF_PUSH’ 1968 | BUF_PUSH (notwordchar); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1968:15: note: in expansion of macro ‘BUF_PUSH’ 1968 | BUF_PUSH (notwordchar); | ^~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1968:15: note: in expansion of macro ‘BUF_PUSH’ 1968 | BUF_PUSH (notwordchar); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1968:15: note: in expansion of macro ‘BUF_PUSH’ 1968 | BUF_PUSH (notwordchar); | ^~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1968:15: note: in expansion of macro ‘BUF_PUSH’ 1968 | BUF_PUSH (notwordchar); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1968:15: note: in expansion of macro ‘BUF_PUSH’ 1968 | BUF_PUSH (notwordchar); | ^~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1968:15: note: in expansion of macro ‘BUF_PUSH’ 1968 | BUF_PUSH (notwordchar); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1968:15: note: in expansion of macro ‘BUF_PUSH’ 1968 | BUF_PUSH (notwordchar); | ^~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1973:15: note: in expansion of macro ‘BUF_PUSH’ 1973 | BUF_PUSH (wordbeg); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1973:15: note: in expansion of macro ‘BUF_PUSH’ 1973 | BUF_PUSH (wordbeg); | ^~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1973:15: note: in expansion of macro ‘BUF_PUSH’ 1973 | BUF_PUSH (wordbeg); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1973:15: note: in expansion of macro ‘BUF_PUSH’ 1973 | BUF_PUSH (wordbeg); | ^~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1973:15: note: in expansion of macro ‘BUF_PUSH’ 1973 | BUF_PUSH (wordbeg); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1973:15: note: in expansion of macro ‘BUF_PUSH’ 1973 | BUF_PUSH (wordbeg); | ^~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1973:15: note: in expansion of macro ‘BUF_PUSH’ 1973 | BUF_PUSH (wordbeg); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1973:15: note: in expansion of macro ‘BUF_PUSH’ 1973 | BUF_PUSH (wordbeg); | ^~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1977:15: note: in expansion of macro ‘BUF_PUSH’ 1977 | BUF_PUSH (wordend); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1977:15: note: in expansion of macro ‘BUF_PUSH’ 1977 | BUF_PUSH (wordend); | ^~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1977:15: note: in expansion of macro ‘BUF_PUSH’ 1977 | BUF_PUSH (wordend); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1977:15: note: in expansion of macro ‘BUF_PUSH’ 1977 | BUF_PUSH (wordend); | ^~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1977:15: note: in expansion of macro ‘BUF_PUSH’ 1977 | BUF_PUSH (wordend); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1977:15: note: in expansion of macro ‘BUF_PUSH’ 1977 | BUF_PUSH (wordend); | ^~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1977:15: note: in expansion of macro ‘BUF_PUSH’ 1977 | BUF_PUSH (wordend); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1977:15: note: in expansion of macro ‘BUF_PUSH’ 1977 | BUF_PUSH (wordend); | ^~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1981:15: note: in expansion of macro ‘BUF_PUSH’ 1981 | BUF_PUSH (wordbound); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1981:15: note: in expansion of macro ‘BUF_PUSH’ 1981 | BUF_PUSH (wordbound); | ^~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1981:15: note: in expansion of macro ‘BUF_PUSH’ 1981 | BUF_PUSH (wordbound); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1981:15: note: in expansion of macro ‘BUF_PUSH’ 1981 | BUF_PUSH (wordbound); | ^~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1981:15: note: in expansion of macro ‘BUF_PUSH’ 1981 | BUF_PUSH (wordbound); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1981:15: note: in expansion of macro ‘BUF_PUSH’ 1981 | BUF_PUSH (wordbound); | ^~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1981:15: note: in expansion of macro ‘BUF_PUSH’ 1981 | BUF_PUSH (wordbound); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1981:15: note: in expansion of macro ‘BUF_PUSH’ 1981 | BUF_PUSH (wordbound); | ^~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1985:15: note: in expansion of macro ‘BUF_PUSH’ 1985 | BUF_PUSH (notwordbound); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1985:15: note: in expansion of macro ‘BUF_PUSH’ 1985 | BUF_PUSH (notwordbound); | ^~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1985:15: note: in expansion of macro ‘BUF_PUSH’ 1985 | BUF_PUSH (notwordbound); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1985:15: note: in expansion of macro ‘BUF_PUSH’ 1985 | BUF_PUSH (notwordbound); | ^~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1985:15: note: in expansion of macro ‘BUF_PUSH’ 1985 | BUF_PUSH (notwordbound); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1985:15: note: in expansion of macro ‘BUF_PUSH’ 1985 | BUF_PUSH (notwordbound); | ^~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1985:15: note: in expansion of macro ‘BUF_PUSH’ 1985 | BUF_PUSH (notwordbound); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1985:15: note: in expansion of macro ‘BUF_PUSH’ 1985 | BUF_PUSH (notwordbound); | ^~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1989:15: note: in expansion of macro ‘BUF_PUSH’ 1989 | BUF_PUSH (begbuf); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1989:15: note: in expansion of macro ‘BUF_PUSH’ 1989 | BUF_PUSH (begbuf); | ^~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1989:15: note: in expansion of macro ‘BUF_PUSH’ 1989 | BUF_PUSH (begbuf); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1989:15: note: in expansion of macro ‘BUF_PUSH’ 1989 | BUF_PUSH (begbuf); | ^~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1989:15: note: in expansion of macro ‘BUF_PUSH’ 1989 | BUF_PUSH (begbuf); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1989:15: note: in expansion of macro ‘BUF_PUSH’ 1989 | BUF_PUSH (begbuf); | ^~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1989:15: note: in expansion of macro ‘BUF_PUSH’ 1989 | BUF_PUSH (begbuf); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1989:15: note: in expansion of macro ‘BUF_PUSH’ 1989 | BUF_PUSH (begbuf); | ^~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1993:15: note: in expansion of macro ‘BUF_PUSH’ 1993 | BUF_PUSH (endbuf); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1993:15: note: in expansion of macro ‘BUF_PUSH’ 1993 | BUF_PUSH (endbuf); | ^~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1993:15: note: in expansion of macro ‘BUF_PUSH’ 1993 | BUF_PUSH (endbuf); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1993:15: note: in expansion of macro ‘BUF_PUSH’ 1993 | BUF_PUSH (endbuf); | ^~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1993:15: note: in expansion of macro ‘BUF_PUSH’ 1993 | BUF_PUSH (endbuf); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1993:15: note: in expansion of macro ‘BUF_PUSH’ 1993 | BUF_PUSH (endbuf); | ^~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1993:15: note: in expansion of macro ‘BUF_PUSH’ 1993 | BUF_PUSH (endbuf); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:1993:15: note: in expansion of macro ‘BUF_PUSH’ 1993 | BUF_PUSH (endbuf); | ^~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:921:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 921 | GET_BUFFER_SPACE (2); \ | ^~~~~~~~~~~~~~~~ regex.c:2011:15: note: in expansion of macro ‘BUF_PUSH_2’ 2011 | BUF_PUSH_2 (duplicate, c1); | ^~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:921:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 921 | GET_BUFFER_SPACE (2); \ | ^~~~~~~~~~~~~~~~ regex.c:2011:15: note: in expansion of macro ‘BUF_PUSH_2’ 2011 | BUF_PUSH_2 (duplicate, c1); | ^~~~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:921:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 921 | GET_BUFFER_SPACE (2); \ | ^~~~~~~~~~~~~~~~ regex.c:2011:15: note: in expansion of macro ‘BUF_PUSH_2’ 2011 | BUF_PUSH_2 (duplicate, c1); | ^~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:921:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 921 | GET_BUFFER_SPACE (2); \ | ^~~~~~~~~~~~~~~~ regex.c:2011:15: note: in expansion of macro ‘BUF_PUSH_2’ 2011 | BUF_PUSH_2 (duplicate, c1); | ^~~~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:921:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 921 | GET_BUFFER_SPACE (2); \ | ^~~~~~~~~~~~~~~~ regex.c:2011:15: note: in expansion of macro ‘BUF_PUSH_2’ 2011 | BUF_PUSH_2 (duplicate, c1); | ^~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:921:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 921 | GET_BUFFER_SPACE (2); \ | ^~~~~~~~~~~~~~~~ regex.c:2011:15: note: in expansion of macro ‘BUF_PUSH_2’ 2011 | BUF_PUSH_2 (duplicate, c1); | ^~~~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:921:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 921 | GET_BUFFER_SPACE (2); \ | ^~~~~~~~~~~~~~~~ regex.c:2011:15: note: in expansion of macro ‘BUF_PUSH_2’ 2011 | BUF_PUSH_2 (duplicate, c1); | ^~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:921:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 921 | GET_BUFFER_SPACE (2); \ | ^~~~~~~~~~~~~~~~ regex.c:2011:15: note: in expansion of macro ‘BUF_PUSH_2’ 2011 | BUF_PUSH_2 (duplicate, c1); | ^~~~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:921:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 921 | GET_BUFFER_SPACE (2); \ | ^~~~~~~~~~~~~~~~ regex.c:2059:15: note: in expansion of macro ‘BUF_PUSH_2’ 2059 | BUF_PUSH_2 (exactn, 0); | ^~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:921:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 921 | GET_BUFFER_SPACE (2); \ | ^~~~~~~~~~~~~~~~ regex.c:2059:15: note: in expansion of macro ‘BUF_PUSH_2’ 2059 | BUF_PUSH_2 (exactn, 0); | ^~~~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:921:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 921 | GET_BUFFER_SPACE (2); \ | ^~~~~~~~~~~~~~~~ regex.c:2059:15: note: in expansion of macro ‘BUF_PUSH_2’ 2059 | BUF_PUSH_2 (exactn, 0); | ^~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:921:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 921 | GET_BUFFER_SPACE (2); \ | ^~~~~~~~~~~~~~~~ regex.c:2059:15: note: in expansion of macro ‘BUF_PUSH_2’ 2059 | BUF_PUSH_2 (exactn, 0); | ^~~~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:921:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 921 | GET_BUFFER_SPACE (2); \ | ^~~~~~~~~~~~~~~~ regex.c:2059:15: note: in expansion of macro ‘BUF_PUSH_2’ 2059 | BUF_PUSH_2 (exactn, 0); | ^~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:921:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 921 | GET_BUFFER_SPACE (2); \ | ^~~~~~~~~~~~~~~~ regex.c:2059:15: note: in expansion of macro ‘BUF_PUSH_2’ 2059 | BUF_PUSH_2 (exactn, 0); | ^~~~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:921:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 921 | GET_BUFFER_SPACE (2); \ | ^~~~~~~~~~~~~~~~ regex.c:2059:15: note: in expansion of macro ‘BUF_PUSH_2’ 2059 | BUF_PUSH_2 (exactn, 0); | ^~~~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:921:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 921 | GET_BUFFER_SPACE (2); \ | ^~~~~~~~~~~~~~~~ regex.c:2059:15: note: in expansion of macro ‘BUF_PUSH_2’ 2059 | BUF_PUSH_2 (exactn, 0); | ^~~~~~~~~~ regex.c:986:42: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 986 | pending_exact = (pending_exact - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:2063:11: note: in expansion of macro ‘BUF_PUSH’ 2063 | BUF_PUSH (c); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:2063:11: note: in expansion of macro ‘BUF_PUSH’ 2063 | BUF_PUSH (c); | ^~~~~~~~ regex.c:984:34: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 984 | laststart = (laststart - old_buffer) + bufp->buffer; \ | ~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:2063:11: note: in expansion of macro ‘BUF_PUSH’ 2063 | BUF_PUSH (c); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:2063:11: note: in expansion of macro ‘BUF_PUSH’ 2063 | BUF_PUSH (c); | ^~~~~~~~ regex.c:982:44: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 982 | fixup_alt_jump = (fixup_alt_jump - old_buffer) + bufp->buffer;\ | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:2063:11: note: in expansion of macro ‘BUF_PUSH’ 2063 | BUF_PUSH (c); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:2063:11: note: in expansion of macro ‘BUF_PUSH’ 2063 | BUF_PUSH (c); | ^~~~~~~~ regex.c:980:26: warning: pointer may be used after ‘realloc’ [-Wuse-after-free] 980 | begalt = (begalt - old_buffer) + bufp->buffer; \ | ~~~~~~~~^~~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:2063:11: note: in expansion of macro ‘BUF_PUSH’ 2063 | BUF_PUSH (c); | ^~~~~~~~ regex.c:211:22: note: call to ‘realloc’ here 211 | #define ORIG_REALLOC realloc | ^ regex.c:973:38: note: in expansion of macro ‘ORIG_REALLOC’ 973 | bufp->buffer = (unsigned char *) ORIG_REALLOC (bufp->buffer, bufp->allocated);\ | ^~~~~~~~~~~~ regex.c:908:7: note: in expansion of macro ‘EXTEND_BUFFER’ 908 | EXTEND_BUFFER () | ^~~~~~~~~~~~~ regex.c:913:5: note: in expansion of macro ‘GET_BUFFER_SPACE’ 913 | GET_BUFFER_SPACE (1); \ | ^~~~~~~~~~~~~~~~ regex.c:2063:11: note: in expansion of macro ‘BUF_PUSH’ 2063 | BUF_PUSH (c); | ^~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF tsprintf.c arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbiargs.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ncbiargs.c:82: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF tree.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/treemgr.h:67, from tree.c:79: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF matrix.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/matrix.h:44, from matrix.c:41: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_socket.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_ansi_ext.h:37, from ncbi_socket.c:75: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ncbi_socket.c: In function ‘s_GetLocalPort’: ncbi_socket.c:440:50: warning: pointer targets in passing argument 3 of ‘getsockname’ differ in signedness [-Wpointer-sign] 440 | if (getsockname(fd, (struct sockaddr*) &sin, &sinlen) == 0 | ^~~~~~~ | | | TSOCK_socklen_t * {aka int *} In file included from ncbi_socketp.h:54, from ncbi_connssl.h:37, from ncbi_socket.c:76: /usr/arm-linux-gnueabi/include/sys/socket.h:117:47: note: expected ‘socklen_t * restrict’ {aka ‘unsigned int * restrict’} but argument is of type ‘TSOCK_socklen_t *’ {aka ‘int *’} 117 | socklen_t *__restrict __len) __THROW; | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ ncbi_socket.c: In function ‘s_IsConnected_’: ncbi_socket.c:2572:73: warning: pointer targets in passing argument 5 of ‘getsockopt’ differ in signedness [-Wpointer-sign] 2572 | if (getsockopt(sock->sock, SOL_SOCKET, SO_ERROR, (void*) error, &len) | ^~~~ | | | TSOCK_socklen_t * {aka int *} In file included from /usr/arm-linux-gnueabi/include/features.h:502: /usr/arm-linux-gnueabi/include/sys/socket.h:260:12: note: expected ‘socklen_t * restrict’ {aka ‘unsigned int * restrict’} but argument is of type ‘TSOCK_socklen_t *’ {aka ‘int *’} 260 | extern int __REDIRECT_NTH (getsockopt, | ^~~~~~~~~~~~~~ ncbi_socket.c: In function ‘s_CreateOnTop’: ncbi_socket.c:4435:35: warning: pointer targets in passing argument 3 of ‘getpeername’ differ in signedness [-Wpointer-sign] 4435 | if (getpeername(fd, &peer.sa, &peerlen) != 0) { | ^~~~~~~~ | | | TSOCK_socklen_t * {aka int *} /usr/arm-linux-gnueabi/include/sys/socket.h:131:47: note: expected ‘socklen_t * restrict’ {aka ‘unsigned int * restrict’} but argument is of type ‘TSOCK_socklen_t *’ {aka ‘int *’} 131 | socklen_t *__restrict __len) __THROW; | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ ncbi_socket.c:4471:43: warning: pointer targets in passing argument 3 of ‘getsockname’ differ in signedness [-Wpointer-sign] 4471 | if (getsockname(fd, &peer.sa, &peerlen) != 0) | ^~~~~~~~ | | | TSOCK_socklen_t * {aka int *} /usr/arm-linux-gnueabi/include/sys/socket.h:117:47: note: expected ‘socklen_t * restrict’ {aka ‘unsigned int * restrict’} but argument is of type ‘TSOCK_socklen_t *’ {aka ‘int *’} 117 | socklen_t *__restrict __len) __THROW; | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ ncbi_socket.c: In function ‘s_CreateListening’: ncbi_socket.c:4865:48: warning: pointer targets in passing argument 3 of ‘getsockname’ differ in signedness [-Wpointer-sign] 4865 | error = getsockname(x_lsock, &addr.sa, &addrlen) != 0 | ^~~~~~~~ | | | TSOCK_socklen_t * {aka int *} /usr/arm-linux-gnueabi/include/sys/socket.h:117:47: note: expected ‘socklen_t * restrict’ {aka ‘unsigned int * restrict’} but argument is of type ‘TSOCK_socklen_t *’ {aka ‘int *’} 117 | socklen_t *__restrict __len) __THROW; | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ ncbi_socket.c: In function ‘s_Accept’: ncbi_socket.c:5105:49: warning: pointer targets in passing argument 3 of ‘accept’ differ in signedness [-Wpointer-sign] 5105 | if ((x_sock = accept(lsock->sock, &addr.sa, &addrlen)) == SOCK_INVALID) { | ^~~~~~~~ | | | TSOCK_socklen_t * {aka int *} /usr/arm-linux-gnueabi/include/sys/socket.h:307:42: note: expected ‘socklen_t * restrict’ {aka ‘unsigned int * restrict’} but argument is of type ‘TSOCK_socklen_t *’ {aka ‘int *’} 307 | socklen_t *__restrict __addr_len); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ ncbi_socket.c: In function ‘s_RecvMsg’: ncbi_socket.c:5409:52: warning: pointer targets in passing argument 6 of ‘recvfrom’ differ in signedness [-Wpointer-sign] 5409 | (struct sockaddr*) &sin, &sinlen); | ^~~~~~~ | | | TSOCK_socklen_t * {aka int *} In file included from /usr/arm-linux-gnueabi/include/sys/socket.h:343: /usr/arm-linux-gnueabi/include/bits/socket2.h:62:56: note: expected ‘socklen_t * restrict’ {aka ‘unsigned int * restrict’} but argument is of type ‘TSOCK_socklen_t *’ {aka ‘int *’} 62 | __SOCKADDR_ARG __addr, socklen_t *__restrict __addr_len) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ ncbi_socket.c: In function ‘TRIGGER_Create’: ncbi_socket.c:5661:18: warning: unused variable ‘x_id’ [-Wunused-variable] 5661 | unsigned int x_id = ++s_ID_Counter; | ^~~~ ncbi_socket.c: In function ‘DSOCK_Bind’: ncbi_socket.c:7390:51: warning: pointer targets in passing argument 3 of ‘getsockname’ differ in signedness [-Wpointer-sign] 7390 | error = getsockname(sock->sock, &addr.sa, &addrlen) != 0 | ^~~~~~~~ | | | TSOCK_socklen_t * {aka int *} /usr/arm-linux-gnueabi/include/sys/socket.h:117:47: note: expected ‘socklen_t * restrict’ {aka ‘unsigned int * restrict’} but argument is of type ‘TSOCK_socklen_t *’ {aka ‘int *’} 117 | socklen_t *__restrict __len) __THROW; | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_buffer.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_assert.h:35, from ncbi_buffer.c:33: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_types.c arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_core.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_ansi_ext.h:37, from ncbi_core.c:33: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_core_c.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_ansi_ext.h:37, from ncbi_core_c.c:36: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_util.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_ansi_ext.h:37, from ncbi_util.c:33: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_priv.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_assert.h:35, from ncbi_priv.h:61, from ncbi_priv.c:33: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_ansi_ext.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_ansi_ext.h:37, from ncbi_ansi_ext.c:33: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_connection.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_assert.h:35, from ncbi_priv.h:61, from ncbi_connection.c:34: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_connector.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_assert.h:35, from ncbi_priv.h:61, from ncbi_connector.c:34: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_connutil.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_ansi_ext.h:37, from ncbi_connutil.c:34: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_file_connector.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_ansi_ext.h:37, from ncbi_file_connector.c:36: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_heapmgr.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_assert.h:35, from ncbi_priv.h:61, from ncbi_heapmgr.c:115: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_http_connector.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_ansi_ext.h:37, from ncbi_http_connector.c:36: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_memory_connector.c arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_lbsmd_stub.c arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_host_info.c arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_server_info.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_ansi_ext.h:37, from ncbi_server_info.c:33: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from /usr/arm-linux-gnueabi/include/string.h:548, from ../include/ncbilcl.h:156: In function ‘strcpy’, inlined from ‘SERV_CreateNcbidInfoEx’ at ncbi_server_info.c:716:9: /usr/arm-linux-gnueabi/include/bits/string_fortified.h:79:10: warning: ‘__builtin___strcpy_chk’ writing 1 or more bytes into a region of size 0 overflows the destination [-Wstringop-overflow=] 79 | return __builtin___strcpy_chk (__dest, __src, __glibc_objsize (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strcpy’, inlined from ‘SERV_CreateHttpInfoEx’ at ncbi_server_info.c:902:9: /usr/arm-linux-gnueabi/include/bits/string_fortified.h:79:10: warning: ‘__builtin___strcpy_chk’ writing 1 or more bytes into a region of size 0 overflows the destination [-Wstringop-overflow=] 79 | return __builtin___strcpy_chk (__dest, __src, __glibc_objsize (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_service.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_ansi_ext.h:37, from ncbi_service.c:33: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_version.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_version.h:37, from ncbi_version.c:33: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_service_connector.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_ansi_ext.h:37, from ncbi_service_connector.c:33: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_ftp_connector.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_ansi_ext.h:37, from ncbi_ftp_connector.c:49: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_dispd.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_ansi_ext.h:37, from ncbi_dispd.c:34: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_lb.c arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_local.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_ansi_ext.h:37, from ncbi_local.c:34: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_socket_connector.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_ansi_ext.h:37, from ncbi_socket_connector.c:36: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF urlquery.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from asnbuild.h:70, from urlquery.c:42: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF binary.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/binary.h:60, from binary.c:59: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_sendmail.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_ansi_ext.h:37, from ncbi_sendmail.c:33: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_base64.c arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asn_connection.c arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_lbos.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_ansi_ext.h:37, from ncbi_lbos.c:36: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ncbi_lbos.c: In function ‘s_LBOS_ReadLbosresolver’: ncbi_lbos.c:756:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 756 | if (s_LBOS_Lbosresolver == NULL) | ^~ ncbi_lbos.c:759:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 759 | s_LBOS_Lbosresolver = strdup(str + 7); | ^~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF parson.c parson.c: In function ‘remove_comments’: parson.c:281:13: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 281 | for (i = 0; i < (ptr - string) + end_token_len; i++) | ^~~ parson.c:283:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 283 | string = ptr + end_token_len - 1; | ^~~~~~ parson.c: In function ‘x_json_object_add’: parson.c:135:5: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 135 | strncpy(output_string, string, n); | ^ In function ‘parson_strdup’, inlined from ‘x_json_object_add’ at parson.c:318:28: parson.c:140:12: note: length computed here 140 | return parson_strndup(string, strlen(string)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ parson.c: In function ‘x_json_value_init_string’: parson.c:135:5: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 135 | strncpy(output_string, string, n); | ^ parson.c:1101:18: note: length computed here 1101 | string_len = strlen(string); | ^~~~~~~~~~~~~~ parson.c: In function ‘x_json_parse_string_with_comments’: parson.c:135:5: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 135 | strncpy(output_string, string, n); | ^ In function ‘parson_strdup’, inlined from ‘x_json_parse_string_with_comments’ at parson.c:913:27: parson.c:140:12: note: length computed here 140 | return parson_strndup(string, strlen(string)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ parson.c: In function ‘x_json_value_deep_copy’: parson.c:135:5: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 135 | strncpy(output_string, string, n); | ^ In function ‘parson_strdup’, inlined from ‘x_json_value_deep_copy’ at parson.c:1195:32: parson.c:140:12: note: length computed here 140 | return parson_strndup(string, strlen(string)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbi_ipv6.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_ansi_ext.h:37, from ncbi_ipv6.c:33: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF raw_scoremat.c arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF drwnflpt.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from drwnflpt.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF drwnfspc.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from drwnfspc.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF drwnmfls.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from drwnmfls.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ rm -f libncbi.a ar cru libncbi.a ncbimain.o ncbibs.o wwwutils.o ncbierr.o ncbienv.o ncbifile.o ncbiprop.o ncbimath.o ncbimem.o ncbimisc.o ncbimsg.o ncbistr.o ncbisgml.o ncbitime.o ncbilang.o asnbufo.o asndebin.o asnenbin.o asngen.o asnio.o asnlex.o asnlext.o asnout.o asnprint.o asntypes.o asngenob.o gifgen.o togif.o ncbithrs.o regex.o tsprintf.o ncbiargs.o tree.o matrix.o ncbi_socket.o ncbi_buffer.o ncbi_types.o ncbi_core.o ncbi_core_c.o ncbi_util.o ncbi_priv.o ncbi_ansi_ext.o ncbi_connection.o ncbi_connector.o ncbi_connutil.o ncbi_file_connector.o ncbi_heapmgr.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_lbsmd_stub.o ncbi_host_info.o ncbi_server_info.o ncbi_service.o ncbi_version.o ncbi_service_connector.o ncbi_ftp_connector.o ncbi_dispd.o ncbi_lb.o ncbi_local.o ncbi_socket_connector.o urlquery.o binary.o ncbi_sendmail.o ncbi_base64.o asn_connection.o ncbi_lbos.o parson.o ncbi_ipv6.o raw_scoremat.o drwnflpt.o drwnfspc.o drwnmfls.o ar: `u' modifier ignored since `D' is the default (see `U') cp -p libncbi.a ../lib ranlib ../lib/libncbi.a arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -DHAVE_LIBGNUTLS ncbi_gnutls.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ncbi_config.h:38, from ncbi_ansi_ext.h:37, from ncbi_gnutls.c:33: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ncbi_gnutls.c: In function ‘s_GnuTlsCreate’: ncbi_gnutls.c:293:5: warning: ‘gnutls_connection_end_t’ is deprecated [-Wdeprecated-declarations] 293 | gnutls_connection_end_t end = (side == eSOCK_Client | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from ncbi_gnutls.c:35: ncbi_gnutls.c: In function ‘s_GnuTlsInit’: ncbi_priv.h:217:33: warning: ‘version’ may be used uninitialized [-Wmaybe-uninitialized] 217 | _mess.message = NcbiMessagePlusError(&_mess.dynamic, \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 | (_message), \ | ~~~~~~~~~~~~~~~~~~~~ 219 | (_error), \ | ~~~~~~~~~~~~~~~~~~~~ 220 | (_descr)); \ | ~~~~~~~~~ ncbi_priv.h:238:5: note: in expansion of macro ‘DO_CORE_LOG_X’ 238 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ ncbi_priv.h:158:5: note: in expansion of macro ‘DO_CORE_LOG’ 158 | DO_CORE_LOG(0, 0, level, \ | ^~~~~~~~~~~ ncbi_gnutls.c:609:13: note: in expansion of macro ‘CORE_LOGF’ 609 | CORE_LOGF(eLOG_Note, ("GNUTLS V%s (Loglevel=%d)", | ^~~~~~~~~ ncbi_gnutls.c:582:17: note: ‘version’ was declared here 582 | const char* version; | ^~~~~~~ rm -f libconnssl.a ar cru libconnssl.a ncbi_gnutls.o ar: `u' modifier ignored since `D' is the default (see `U') cp -p libconnssl.a ../lib ranlib ../lib/libconnssl.a arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objacces.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/asnacces.h:9, from objacces.c:65: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objacces.c: In function ‘LinkSetAsnWrite’: objacces.c:140:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 140 | if (atp == NULL) | ^~ objacces.c:143:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 143 | if (lsp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objacces.c: In function ‘LinkSetAsnRead’: objacces.c:216:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 216 | if (atp == NULL) | ^~ objacces.c:219:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 219 | lsp = LinkSetNew(); | ^~~ objacces.c:220:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 220 | if (lsp == NULL) | ^~ objacces.c:223:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 223 | if (AsnReadVal(aip, atp, &av) <= 0) /* read the start struct */ | ^~ objacces.c:226:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 226 | if (atp == NULL) | ^~ objacces.c:228:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 228 | if (AsnReadVal(aip, atp, &av) <= 0) /* get the num */ | ^~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objalign.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objalign.h:103, from objalign.c:43: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objalign.c: In function ‘CommonSeqAlignLabelFunc’: objalign.c:135:34: warning: variable ‘tmp’ set but not used [-Wunused-but-set-variable] 135 | CharPtr curr, typelabel, tmp; | ^~~ objalign.c: In function ‘SeqAlignAsnRead’: objalign.c:597:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 597 | if (atp == NULL) | ^~ objalign.c:600:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 600 | sap = SeqAlignNew(); | ^~~ objalign.c:601:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 601 | if (sap == NULL) | ^~ objalign.c:604:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 604 | if (AsnReadVal(aip, atp, &av) <= 0) goto erret; /* read the start struct */ | ^~ objalign.c: In function ‘DenseDiagAsnWrite’: objalign.c:1020:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1020 | if (atp == NULL) | ^~ objalign.c:1023:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1023 | if (ddp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objalign.c: In function ‘DenseDiagAsnRead’: objalign.c:1112:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1112 | if (atp == NULL) | ^~ objalign.c:1115:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1115 | ddp = DenseDiagNew(); | ^~~ objalign.c:1116:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1116 | if (ddp == NULL) | ^~ objalign.c:1119:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1119 | if (AsnReadVal(aip, atp, &av) <= 0) goto erret; /* read the start struct */ | ^~ objalign.c: In function ‘DenseSegAsnWrite’: objalign.c:1268:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1268 | if (atp == NULL) | ^~ objalign.c:1271:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1271 | if (dsp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objalign.c: In function ‘DenseSegAsnRead’: objalign.c:1374:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1374 | if (atp == NULL) | ^~ objalign.c:1377:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1377 | dsp = DenseSegNew(); | ^~~ objalign.c:1378:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1378 | if (dsp == NULL) | ^~ objalign.c:1381:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1381 | if (AsnReadVal(aip, atp, &av) <= 0) goto erret; /* read the start struct */ | ^~ objalign.c: In function ‘StdSegAsnWrite’: objalign.c:1559:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1559 | if (atp == NULL) | ^~ objalign.c:1562:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1562 | if (ssp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objalign.c:1581:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1581 | if (! SeqLocSetAsnWrite(ssp->loc, aip, STD_SEG_loc, STD_SEG_loc_E)) | ^~ objalign.c:1584:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1584 | if (ssp->scores != NULL) | ^~ objalign.c: In function ‘StdSegAsnRead’: objalign.c:1626:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1626 | if (atp == NULL) | ^~ objalign.c:1629:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1629 | ssp = StdSegNew(); | ^~~ objalign.c:1630:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1630 | if (ssp == NULL) | ^~ objalign.c:1633:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1633 | if (AsnReadVal(aip, atp, &av) <= 0) goto erret; /* read the start struct */ | ^~ objalign.c: In function ‘SeqAlignSetAsnWrite’: objalign.c:1704:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1704 | if (atp == NULL) | ^~ objalign.c:1708:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1708 | oldsap = sap; | ^~~~~~ objalign.c: In function ‘PackSegAsnWrite’: objalign.c:1892:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1892 | if (atp == NULL) | ^~ objalign.c:1895:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1895 | if (psp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objalign.c:1926:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1926 | if (! AsnCloseStruct(aip, PACKED_SEG_starts, (Pointer)psp->starts)) | ^~ objalign.c:1929:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1929 | av.ptrvalue = psp->present; | ^~ objalign.c: In function ‘PackSegAsnRead’: objalign.c:1999:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1999 | if (atp == NULL) | ^~ objalign.c:2002:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2002 | psp = PackSegNew(); | ^~~ objalign.c:2003:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2003 | if (psp == NULL) | ^~ objalign.c:2006:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2006 | if (AsnReadVal(aip, atp, &av) <= 0) goto erret; /* read the start struct */ | ^~ objalign.c: In function ‘SplicedSegAsnRead’: objalign.c:2179:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2179 | AsnReadFunc func; | ^~~~ objalign.c: In function ‘SparseSegAsnRead’: objalign.c:2422:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2422 | AsnReadFunc func; | ^~~~ objalign.c: In function ‘SplicedExonAsnRead’: objalign.c:2614:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2614 | AsnReadFunc func; | ^~~~ objalign.c: In function ‘SplicedSegModifierFree’: objalign.c:2875:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 2875 | Pointer pnt; | ^~~ objalign.c: In function ‘ProductPosFree’: objalign.c:3050:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 3050 | Pointer pnt; | ^~~ objalign.c: In function ‘SplicedExonChunkFree’: objalign.c:3225:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 3225 | Pointer pnt; | ^~~ objalign.c: In function ‘SpliceSiteAsnRead’: objalign.c:3469:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 3469 | AsnReadFunc func; | ^~~~ objalign.c: In function ‘ProtPosAsnRead’: objalign.c:3626:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 3626 | AsnReadFunc func; | ^~~~ objalign.c: In function ‘SparseAlignAsnRead’: objalign.c:3798:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 3798 | AsnReadFunc func; | ^~~~ objalign.c: In function ‘SparseSegExtAsnRead’: objalign.c:4020:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 4020 | AsnReadFunc func; | ^~~~ objalign.c: In function ‘SplicedSegModifierAsnRead’: objalign.c:2955:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 2955 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objalign.c:2903:10: note: ‘choice’ was declared here 2903 | Uint1 choice; | ^~~~~~ objalign.c: In function ‘SplicedExonChunkAsnRead’: objalign.c:3326:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 3326 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objalign.c:3253:10: note: ‘choice’ was declared here 3253 | Uint1 choice; | ^~~~~~ objalign.c: In function ‘ProductPosAsnRead’: objalign.c:3130:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 3130 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objalign.c:3081:10: note: ‘choice’ was declared here 3081 | Uint1 choice; | ^~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objall.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objsset.h:48, from ../include/objall.h:64, from objall.c:63: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objbibli.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/asnbibli.h:9, from objbibli.c:113: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objbibli.c: In function ‘AffilAsnRead’: objbibli.c:208:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 208 | if (atp == NULL) | ^~ objbibli.c:211:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 211 | afp = AffilNew(); | ^~~ objbibli.c: In function ‘AffilAsnWrite’: objbibli.c:296:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 296 | if (atp == NULL) | ^~ objbibli.c:299:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 299 | if (afp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objbibli.c: In function ‘AuthListFree’: objbibli.c:458:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 458 | if (alp->affil != NULL) | ^~ objbibli.c:460:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 460 | return (AuthListPtr)MemFree(alp); | ^~~~~~ objbibli.c: In function ‘AuthListAsnRead’: objbibli.c:489:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 489 | if (atp == NULL) | ^~ objbibli.c:492:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 492 | alp = AuthListNew(); | ^~~ objbibli.c: In function ‘AuthListAsnWrite’: objbibli.c:583:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 583 | if (atp == NULL) | ^~ objbibli.c:586:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 586 | if (alp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objbibli.c:590:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 590 | if (! AsnOpenStruct(aip, atp, (Pointer)alp)) /* open AuthList SEQUENCE */ | ^~ objbibli.c:593:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 593 | av.ptrvalue = alp->names; | ^~ objbibli.c: In function ‘AuthorFree’: objbibli.c:677:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 677 | if (ap->affil != NULL) | ^~ objbibli.c:679:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 679 | return (AuthorPtr)MemFree(ap); | ^~~~~~ objbibli.c: In function ‘AuthorAsnRead’: objbibli.c:707:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 707 | if (atp == NULL) | ^~ objbibli.c:710:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 710 | ap = AuthorNew(); | ^~ objbibli.c: In function ‘AuthorAsnWrite’: objbibli.c:779:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 779 | if (atp == NULL) | ^~ objbibli.c:782:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 782 | if (ap == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objbibli.c: In function ‘CitArtAsnRead’: objbibli.c:925:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 925 | if (atp == NULL) | ^~ objbibli.c:928:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 928 | cap = CitArtNew(); | ^~~ objbibli.c: In function ‘CitArtAsnWrite’: objbibli.c:1027:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1027 | if (atp == NULL) | ^~ objbibli.c:1030:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1030 | if (cap == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objbibli.c:1034:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1034 | if (! AsnOpenStruct(aip, atp, (Pointer)cap)) /* open the SEQUENCE */ | ^~ objbibli.c:1037:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1037 | if (cap->title != NULL) | ^~ objbibli.c: In function ‘ImprintAsnRead’: objbibli.c:1152:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1152 | if (atp == NULL) | ^~ objbibli.c:1155:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1155 | ip = ImprintNew(); | ^~ objbibli.c: In function ‘ImprintAsnWrite’: objbibli.c:1251:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1251 | if (atp == NULL) | ^~ objbibli.c:1254:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1254 | if (ip == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objbibli.c: In function ‘CitRetractFree’: objbibli.c:1360:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1360 | if (crp == NULL) | ^~ In file included from ../include/ncbi.h:59: ../include/ncbimem.h:232:23: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 232 | #define MemFree Nlm_MemFree | ^~~~~~~~~~~ objbibli.c:1363:9: note: in expansion of macro ‘MemFree’ 1363 | MemFree(crp->exp); | ^~~~~~~ objbibli.c: In function ‘CitRetractAsnRead’: objbibli.c:1391:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1391 | if (atp == NULL) | ^~ objbibli.c:1394:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1394 | crp = CitRetractNew(); | ^~~ objbibli.c: In function ‘CitRetractAsnWrite’: objbibli.c:1445:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1445 | if (atp == NULL) | ^~ objbibli.c:1448:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1448 | if (crp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objbibli.c: In function ‘CitJourAsnRead’: objbibli.c:1524:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1524 | if (atp == NULL) | ^~ objbibli.c:1527:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1527 | cjp = CitJourNew(); | ^~~ objbibli.c: In function ‘CitJourAsnWrite’: objbibli.c:1576:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1576 | if (atp == NULL) | ^~ objbibli.c:1579:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1579 | if (cjp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objbibli.c:1585:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1585 | if (! ImprintAsnWrite(cjp->imp, aip, CIT_JOUR_imp)) | ^~ objbibli.c:1587:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1587 | if (! AsnCloseStruct(aip, atp, (Pointer)cjp)) /* end SEQUENCE */ | ^~ objbibli.c: In function ‘CitBookAsnRead’: objbibli.c:1676:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1676 | if (atp == NULL) | ^~ objbibli.c:1679:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1679 | cbp = CitBookNew(); | ^~~ objbibli.c: In function ‘CitBookAsnWrite’: objbibli.c:1744:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1744 | if (atp == NULL) | ^~ objbibli.c:1747:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1747 | if (cbp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objbibli.c:1760:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1760 | if (! ImprintAsnWrite(cbp->imp, aip, CIT_BOOK_imp)) | ^~ objbibli.c:1762:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1762 | if (! AsnCloseStruct(aip, atp, (Pointer)cbp)) /* end SEQUENCE */ | ^~ objbibli.c: In function ‘CitProcAsnWrite’: objbibli.c:1879:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1879 | if (atp == NULL) | ^~ objbibli.c:1882:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1882 | if (cpp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objbibli.c:1901:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1901 | if (! AsnCloseStruct(aip, CIT_PROC_meet, (Pointer)cpp->otherdata)) | ^~ objbibli.c:1903:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1903 | if (! AsnCloseStruct(aip, atp, (Pointer)cpp)) /* end SEQUENCE */ | ^~ objbibli.c: In function ‘CitLetAsnWrite’: objbibli.c:1995:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1995 | if (atp == NULL) | ^~ objbibli.c:1998:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1998 | if (clp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objbibli.c: In function ‘CitPatAsnRead’: objbibli.c:2091:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2091 | if (atp == NULL) | ^~ objbibli.c:2094:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2094 | cpp = CitPatNew(); | ^~~ objbibli.c: In function ‘CitPatAsnWrite’: objbibli.c:2213:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2213 | if (atp == NULL) | ^~ objbibli.c:2216:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2216 | if (cpp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objbibli.c: In function ‘IdPatAsnRead’: objbibli.c:2346:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2346 | if (atp == NULL) | ^~ objbibli.c:2349:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2349 | idp = IdPatNew(); | ^~~ objbibli.c: In function ‘IdPatAsnWrite’: objbibli.c:2412:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2412 | if (atp == NULL) | ^~ objbibli.c:2415:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2415 | if (idp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objbibli.c: In function ‘CitGenAsnRead’: objbibli.c:2546:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2546 | if (atp == NULL) | ^~ objbibli.c:2549:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2549 | cgp = CitGenNew(); | ^~~ objbibli.c: In function ‘CitGenAsnWrite’: objbibli.c:2627:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2627 | if (atp == NULL) | ^~ objbibli.c:2630:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2630 | if (cgp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objbibli.c: In function ‘TitleAsnWrite’: objbibli.c:2825:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2825 | if (atp == NULL) | ^~ objbibli.c:2828:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2828 | if (tp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objbibli.c: In function ‘CitSubFree’: objbibli.c:2909:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2909 | if (csp == NULL) | ^~ objbibli.c:2912:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2912 | AuthListFree(csp->authors); | ^~~~~~~~~~~~ objbibli.c: In function ‘CitSubAsnRead’: objbibli.c:2943:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2943 | if (atp == NULL) | ^~ objbibli.c:2946:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2946 | csp = CitSubNew(); | ^~~ objbibli.c:2958:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2958 | if (atp == NULL) | ^~ objbibli.c:2961:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2961 | if (atp == CIT_SUB_imp) | ^~ objbibli.c: In function ‘CitSubAsnWrite’: objbibli.c:3029:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 3029 | if (atp == NULL) | ^~ objbibli.c:3032:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 3032 | if (csp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objbibli.c:3038:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 3038 | if (! AuthListAsnWrite(csp->authors, aip, CIT_SUB_authors)) | ^~ objbibli.c:3041:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 3041 | if (csp->imp != NULL) | ^~ objbibli.c: In function ‘PatPrioritySetAsnRead’: objbibli.c:3694:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 3694 | if (ppp == NULL) | ^~ objbibli.c:3697:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 3697 | if (head == NULL) | ^~ objbibli.c:3715:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 3715 | if (atp == NULL) | ^~ objbibli.c:3717:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 3717 | ppp->date = DateAsnRead(aip, atp); | ^~~ objbibli.c: In function ‘PatPrioritySetAsnWrite’: objbibli.c:3755:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 3755 | if (! AsnOpenStruct(aip, set, (Pointer)ppp)) /* open the SEQUENCE OF */ | ^~ objbibli.c:3758:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 3758 | for (tmp = ppp; tmp != NULL; tmp = tmp->next) | ^~~ objbibli.c: In function ‘ArticleIdAsnRead’: objbibli.c:3849:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 3849 | if (atp == NULL) | ^~ objbibli.c:3852:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 3852 | aidp = ArticleIdNew(); | ^~~~ objbibli.c: In function ‘ArticleIdAsnWrite’: objbibli.c:3925:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 3925 | if (atp == NULL) | ^~ objbibli.c:3928:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 3928 | if (aidp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objbibli.c: In function ‘PubStatusDateAsnRead’: objbibli.c:4039:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 4039 | if (atp == NULL) | ^~ objbibli.c:4042:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 4042 | psdp = PubStatusDateNew(); | ^~~~ objbibli.c: In function ‘PubStatusDateAsnWrite’: objbibli.c:4091:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 4091 | if (atp == NULL) | ^~ objbibli.c:4094:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 4094 | if (psdp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objfeat.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objfeat.h:48, from objfeat.c:53: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objfeat.c: In function ‘ModelEvidenceSupportAsnRead’: objfeat.c:1500:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1500 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘ExperimentSupportAsnRead’: objfeat.c:1748:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1748 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘ProgramIdAsnRead’: objfeat.c:1933:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1933 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘EvidenceBasisAsnRead’: objfeat.c:2103:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2103 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘InferenceSupportAsnRead’: objfeat.c:2267:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2267 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘ModelEvidenceItemAsnRead’: objfeat.c:2483:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2483 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘SeqFeatSupportAsnRead’: objfeat.c:2688:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2688 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘RNAQualAsnRead’: objfeat.c:4244:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 4244 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘RNAQualSetAsnRead’: objfeat.c:4396:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 4396 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘RNAGenAsnRead’: objfeat.c:4524:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 4524 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘GeneNomenclatureAsnRead’: objfeat.c:4707:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 4707 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘OrgNameMatch’: objfeat.c:5957:28: warning: self-comparison always evaluates to false [-Wtautological-compare] 5957 | || onp2->mgcode != onp2->mgcode | ^~ objfeat.c: In function ‘TaxElementAsnWrite’: objfeat.c:7399:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 7399 | if (! AsnOpenStruct(aip, atp, (Pointer)tep)) | ^~ objfeat.c:7402:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 7402 | av.intvalue = (Int4)(tep->fixed_level); | ^~ objfeat.c: In function ‘PCRPrimerAsnRead’: objfeat.c:8276:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 8276 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘PCRPrimerSetAsnRead’: objfeat.c:8421:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 8421 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘PCRReactionAsnRead’: objfeat.c:8542:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 8542 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘PCRReactionSetAsnRead’: objfeat.c:8685:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 8685 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘CloneRefAsnRead’: objfeat.c:8812:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 8812 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘CloneSeqSetAsnRead’: objfeat.c:9005:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 9005 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘CloneSeqAsnRead’: objfeat.c:9135:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 9135 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘SomaticOriginAsnRead’: objfeat.c:9487:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 9487 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘SomaticOriginConditionAsnRead’: objfeat.c:9566:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 9566 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘VariationRefAsnRead’: objfeat.c:9645:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 9645 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘Consequence_loss_of_heterozygosityAsnRead’: objfeat.c:10687:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 10687 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘Consequence_frameshiftAsnRead’: objfeat.c:10765:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 10765 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘VarRefDataFree’: objfeat.c:10865:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 10865 | Pointer pnt; | ^~~ objfeat.c: In function ‘VarRefDataSetAsnRead’: objfeat.c:10918:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 10918 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘Consequence_elementFree’: objfeat.c:11112:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 11112 | Pointer pnt; | ^~~ objfeat.c: In function ‘VariationInstAsnRead’: objfeat.c:11241:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 11241 | AsnReadFunc func; | ^~~~ objfeat.c: At top level: objfeat.c:11393:1: warning: "/*" within comment [-Wcomment] 11393 | /************************************************** objfeat.c: In function ‘VariantPropertiesAsnRead’: objfeat.c:11422:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 11422 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘PhenotypeAsnRead’: objfeat.c:11746:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 11746 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘PopulationDataAsnRead’: objfeat.c:11945:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 11945 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘ExtLocAsnRead’: objfeat.c:12161:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 12161 | AsnReadFunc func; | ^~~~ objfeat.c: In function ‘Seq_seqFree’: objfeat.c:12327:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 12327 | Pointer pnt; | ^~~ objfeat.c: In function ‘DeltaItemAsnRead’: objfeat.c:12360:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 12360 | AsnReadFunc func; | ^~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objgen.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/asngen.h:9, from objgen.c:47: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objgen.c: In function ‘DateFree’: objgen.c:147:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 147 | if (dp == NULL) | ^~ In file included from ../include/ncbi.h:59: ../include/ncbimem.h:232:23: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 232 | #define MemFree Nlm_MemFree | ^~~~~~~~~~~ objgen.c:150:9: note: in expansion of macro ‘MemFree’ 150 | MemFree(dp->str); | ^~~~~~~ objgen.c: In function ‘DateClean’: objgen.c:161:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 161 | if (dp == NULL) | ^~ objgen.c:164:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 164 | memset(dp, 0, sizeof(NCBI_Date)); | ^~~~~~ objgen.c: In function ‘DateAsnWrite’: objgen.c:399:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 399 | if (atp == NULL) | ^~ objgen.c:402:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 402 | if (dp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objgen.c: In function ‘DateAsnRead’: objgen.c:494:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 494 | if (atp == NULL) | ^~ objgen.c:497:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 497 | dp = DateNew(); | ^~ objgen.c:498:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 498 | if (dp == NULL) | ^~ objgen.c:501:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 501 | if (AsnReadVal(aip, atp, &av) <= 0) goto erret; /* read the CHOICE value (nothing) */ | ^~ objgen.c: In function ‘DbtagFree’: objgen.c:752:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 752 | if (dbt == NULL) | ^~ objgen.c:755:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 755 | dbt->tag = ObjectIdFree(dbt->tag); | ^~~ objgen.c: In function ‘DbtagAsnRead’: objgen.c:784:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 784 | if (atp == NULL) | ^~ objgen.c:787:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 787 | dbt = DbtagNew(); | ^~~ objgen.c:788:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 788 | if (dbt == NULL) | ^~ objgen.c:791:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 791 | if (AsnReadVal(aip, atp, &av) <= 0) goto erret; /* read the START_STRUCT */ | ^~ objgen.c:799:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 799 | if (dbt->tag == NULL) | ^~ objgen.c:802:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 802 | atp = AsnReadId(aip, amp, atp); if (atp == NULL) goto erret; /* END_STRUCT */ | ^~~ objgen.c: In function ‘DbtagAsnWrite’: objgen.c:833:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 833 | if (atp == NULL) | ^~ objgen.c:836:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 836 | if (dbt == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objgen.c: In function ‘ObjectIdFree’: objgen.c:949:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 949 | if (oid == NULL) | ^~ ../include/ncbimem.h:232:23: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 232 | #define MemFree Nlm_MemFree | ^~~~~~~~~~~ objgen.c:952:9: note: in expansion of macro ‘MemFree’ 952 | MemFree(oid->str); | ^~~~~~~ objgen.c: In function ‘ObjectIdAsnRead’: objgen.c:980:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 980 | if (atp == NULL) | ^~ objgen.c:983:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 983 | if (AsnReadVal(aip, atp, &av) <= 0) goto erret; /* read the CHOICE value (nothing) */ | ^~ objgen.c:989:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 989 | if (oid == NULL) | ^~ objgen.c:991:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 991 | if (atp == OBJECT_ID_id) | ^~ objgen.c: In function ‘ObjectIdAsnWrite’: objgen.c:1024:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1024 | if (atp == NULL) | ^~ objgen.c:1027:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1027 | if (oid == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objgen.c: In function ‘NameStdFree’: objgen.c:1174:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1174 | if (nsp == NULL) | ^~ objgen.c:1177:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1177 | for (i = 0; i < 7; i++) | ^~~ objgen.c: In function ‘NameStdAsnRead’: objgen.c:1208:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1208 | if (atp == NULL) | ^~ objgen.c:1211:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1211 | nsp = NameStdNew(); | ^~~ objgen.c:1212:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1212 | if (nsp == NULL) | ^~ objgen.c:1215:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1215 | if (AsnReadVal(aip, atp, &av) <= 0) goto erret; /* read the START_STRUCT */ | ^~ objgen.c: In function ‘NameStdAsnWrite’: objgen.c:1271:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1271 | if (atp == NULL) | ^~ objgen.c:1274:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1274 | if (nsp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objgen.c: In function ‘PersonIdFree’: objgen.c:1368:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1368 | if (pid == NULL) | ^~ objgen.c:1371:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1371 | if (pid->choice == 1) /* Dbtag */ | ^~ objgen.c: In function ‘PersonIdAsnWrite’: objgen.c:1464:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1464 | if (atp == NULL) | ^~ objgen.c:1467:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1467 | if (pid == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objgen.c: In function ‘IntFuzzAsnRead’: objgen.c:1682:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1682 | if (atp == NULL) | ^~ objgen.c:1685:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1685 | ifp = IntFuzzNew(); | ^~~ objgen.c:1686:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1686 | if (ifp == NULL) | ^~ objgen.c:1689:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1689 | if (AsnReadVal(aip, atp, &av) <= 0) goto erret; /* read the CHOICE (nothing) */ | ^~ objgen.c: In function ‘UserFieldAsnRead’: objgen.c:1944:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1944 | if (atp == NULL) | ^~ objgen.c:1947:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1947 | ufp = UserFieldNew(); | ^~~ objgen.c: In function ‘UserObjectAsnRead’: objgen.c:2434:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2434 | if (atp == NULL) | ^~ objgen.c:2437:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2437 | uop = UserObjectNew(); | ^~~ objgen.c:2438:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2438 | if (uop == NULL) | ^~ objgen.c:2441:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2441 | if (AsnReadVal(aip, atp, &av) <= 0) goto erret; /* read the start struct */ | ^~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objloc.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objloc.h:88, from objloc.c:43: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objloc.c: In function ‘SeqIdAsnWrite’: objloc.c:313:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 313 | if (atp == NULL) | ^~ objloc.c:316:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 316 | if (anp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objloc.c: In function ‘SeqIdAsnRead’: objloc.c:443:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 443 | if (atp == NULL) | ^~ objloc.c:446:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 446 | anp = ValNodeNew(NULL); | ^~~ objloc.c: In function ‘SeqIdDup’: objloc.c:587:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 587 | if (oldid == NULL) | ^~ objloc.c:590:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 590 | newid = ValNodeNew(NULL); | ^~~~~ objloc.c: In function ‘SeqIdSetAsnRead’: objloc.c:752:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 752 | if (AsnReadVal(aip, atp, &av) <= 0) /* end struct */ | ^~ objloc.c:754:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 754 | if (first == NULL) | ^~ objloc.c: In function ‘SeqIdSetAsnWrite’: objloc.c:786:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 786 | if (atp2 == NULL) | ^~ objloc.c:789:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 789 | if (anp == NULL) { AsnNullValueMsg(aip, settype); goto erret; } | ^~ objloc.c: In function ‘TextSeqIdAsnWrite’: objloc.c:864:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 864 | if (atp == NULL) | ^~ objloc.c:867:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 867 | if (tsip == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objloc.c: In function ‘TextSeqIdAsnRead’: objloc.c:934:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 934 | if (atp == NULL) | ^~ objloc.c:937:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 937 | tsip = TextSeqIdNew(); | ^~~~ objloc.c:938:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 938 | if (tsip == NULL) | ^~ objloc.c:941:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 941 | if ((AsnReadVal(aip, oldtype, &av)) <= 0) /* read the START_STRUCT */ | ^~ objloc.c: In function ‘PatentSeqIdAsnWrite’: objloc.c:1018:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1018 | if (atp == NULL) | ^~ objloc.c:1021:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1021 | if (psip == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objloc.c: In function ‘PatentSeqIdAsnRead’: objloc.c:1068:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1068 | if (atp == NULL) | ^~ objloc.c:1071:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1071 | psip = PatentSeqIdNew(); | ^~~~ objloc.c:1072:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1072 | if (psip == NULL) | ^~ objloc.c:1075:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1075 | if (AsnReadVal(aip, atp, &av) <= 0) /* read the START_STRUCT */ | ^~ objloc.c: In function ‘GiimAsnWrite’: objloc.c:1151:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1151 | if (atp == NULL) | ^~ objloc.c:1154:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1154 | if (gip == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objloc.c: In function ‘GiimAsnRead’: objloc.c:1216:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1216 | if (gip == NULL) | ^~ objloc.c:1219:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1219 | if (AsnReadVal(aip, oldtype, &av) <= 0) /* read the START_STRUCT */ | ^~ objloc.c: In function ‘PDBSeqIdAsnWrite’: objloc.c:1305:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1305 | if (atp == NULL) | ^~ objloc.c:1308:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1308 | if (pdbsip == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objloc.c: In function ‘PDBSeqIdAsnRead’: objloc.c:1374:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1374 | if (atp == NULL) | ^~ objloc.c:1377:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1377 | pdbsip = PDBSeqIdNew(); | ^~~~~~ objloc.c:1378:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1378 | if (pdbsip == NULL) | ^~ objloc.c:1381:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1381 | if ((AsnReadVal(aip, oldtype, &av)) <= 0) /* read the START_STRUCT */ | ^~ objloc.c: In function ‘SeqLocAsnWrite’: objloc.c:1528:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1528 | if (atp == NULL) | ^~ objloc.c:1531:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1531 | if (anp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objloc.c: In function ‘SeqLocAsnRead’: objloc.c:1624:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1624 | if (atp == NULL) | ^~ objloc.c:1627:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1627 | anp = ValNodeNew(NULL); | ^~~ objloc.c:1628:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1628 | if (anp == NULL) | ^~ objloc.c:1631:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1631 | if (AsnReadVal(aip, atp, &av) <= 0) /* read the CHOICE value (nothing) */ | ^~ objloc.c: In function ‘SeqLocMixAsnWrite’: objloc.c:1738:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1738 | if (atp == NULL) | ^~ objloc.c:1741:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1741 | if (anp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objloc.c: In function ‘SeqLocEquivAsnWrite’: objloc.c:1805:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1805 | if (atp == NULL) | ^~ objloc.c:1808:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1808 | if (anp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objloc.c: In function ‘SeqLocSetAsnWrite’: objloc.c:1873:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1873 | if (atp2 == NULL) | ^~ objloc.c:1876:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1876 | if (anp == NULL) { AsnNullValueMsg(aip, set); goto erret; } | ^~ objloc.c: In function ‘SeqLocSetAsnRead’: objloc.c:1940:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1940 | if (AsnReadVal(aip, atp, &av) <= 0) /* read END_STRUCT */ | ^~ objloc.c:1942:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1942 | if (first == NULL) | ^~ objloc.c: In function ‘SeqIntAsnWrite’: objloc.c:2022:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2022 | if (atp == NULL) | ^~ objloc.c:2025:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2025 | if (sip == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objloc.c: In function ‘SeqIntAsnRead’: objloc.c:2095:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2095 | if (atp == NULL) | ^~ objloc.c:2098:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2098 | sip = SeqIntNew(); | ^~~ objloc.c:2099:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2099 | if (sip == NULL) | ^~ objloc.c:2102:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2102 | if (AsnReadVal(aip, oldtype, &av) <= 0) /* read the START_STRUCT */ | ^~ objloc.c: In function ‘PackSeqIntAsnWrite’: objloc.c:2179:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2179 | if (atp == NULL) | ^~ objloc.c:2181:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2181 | oldsip = sip; | ^~~~~~ objloc.c:2185:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2185 | if (! AsnOpenStruct(aip, atp, (Pointer)oldsip)) | ^~ objloc.c:2187:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2187 | for ( ;sip != NULL; sip = sip->next) | ^~~ objloc.c: In function ‘SeqPntAsnWrite’: objloc.c:2309:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2309 | if (atp == NULL) | ^~ objloc.c:2312:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2312 | if (spp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objloc.c: In function ‘SeqPntAsnRead’: objloc.c:2374:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2374 | if (atp == NULL) | ^~ objloc.c:2377:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2377 | spp = SeqPntNew(); | ^~~ objloc.c:2378:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2378 | if (spp == NULL) | ^~ objloc.c:2381:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2381 | if (AsnReadVal(aip, oldtype, &av) <= 0) /* read the START_STRUCT */ | ^~ objloc.c: In function ‘PackSeqPntAsnWrite’: objloc.c:2479:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2479 | if (atp == NULL) | ^~ objloc.c:2482:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2482 | if (pspp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objloc.c: In function ‘PackSeqPntAsnRead’: objloc.c:2553:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2553 | if (atp == NULL) | ^~ objloc.c:2556:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2556 | pspp = PackSeqPntNew(); | ^~~~ objloc.c:2557:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2557 | if (pspp == NULL) | ^~ objloc.c:2560:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2560 | if (AsnReadVal(aip, oldtype, &av) <= 0) /* read the START_STRUCT */ | ^~ objloc.c: In function ‘SeqBondAsnWrite’: objloc.c:2724:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2724 | if (atp == NULL) | ^~ objloc.c:2727:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2727 | if (sbp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objloc.c: In function ‘SeqBondAsnRead’: objloc.c:2776:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2776 | if (atp == NULL) | ^~ objloc.c:2779:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2779 | sbp = SeqBondNew(); | ^~~ objloc.c:2780:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2780 | if (sbp == NULL) | ^~ objloc.c:2783:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2783 | if (AsnReadVal(aip, oldtype, &av) <= 0) /* read the START_STRUCT */ | ^~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objmedli.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objmedli.h:80, from objmedli.c:104: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objmedli.c: In function ‘MedlineMeshAsnRead’: objmedli.c:248:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 248 | if (atp == NULL) | ^~ objmedli.c:251:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 251 | mmp = MedlineMeshNew(); | ^~~ objmedli.c: In function ‘DocRefFree’: objmedli.c:1190:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1190 | if (drp == NULL) | ^~ objmedli.c:1193:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1193 | return (DocRefPtr)MemFree(drp); | ^~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objpub.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objpub.h:70, from objpub.c:125: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objpub.c: In function ‘PubSetAsnRead’: objpub.c:831:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 831 | if (AsnReadVal(aip, settype, &av) <= 0) /* read START_STRUCT */ | ^~ objpub.c:834:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 834 | if (settype == PUB_SET_pub) | ^~ objpub.c:901:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 901 | if (AsnReadVal(aip, settype, &av) <= 0) /* read END_STRUCT for SET OF */ | ^~ objpub.c:903:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 903 | if (anp == NULL) | ^~ objpub.c: In function ‘PubLabelUnique’: objpub.c:1360:24: warning: unused variable ‘pmid’ [-Wunused-variable] 1360 | Int4 muid = 0, pmid = 0; | ^~~~ objpub.c:1360:14: warning: unused variable ‘muid’ [-Wunused-variable] 1360 | Int4 muid = 0, pmid = 0; | ^~~~ objpub.c: In function ‘PubSetAsnRead’: objpub.c:870:17: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 870 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objpub.c:805:11: note: ‘choice’ was declared here 805 | Uint1 choice; | ^~~~~~ objpub.c:876:16: warning: ‘func’ may be used uninitialized [-Wmaybe-uninitialized] 876 | pnt = (* func)(aip, atp); | ~^~~~~~~~~~~~~~~~~ objpub.c:806:17: note: ‘func’ was declared here 806 | AsnReadFunc func; | ^~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objres.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objres.h:73, from objres.c:84: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objres.c: In function ‘SeqGraphFree’: objres.c:208:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 208 | else /* byte */ | ^~~~ objres.c:211:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 211 | ObjMgrDelete(OBJ_SEQGRAPH, (Pointer)sgp); | ^~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objscoremat.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from objscoremat.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objscoremat.c: In function ‘PssmAsnRead’: objscoremat.c:93:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 93 | AsnReadFunc func; | ^~~~ objscoremat.c: In function ‘PssmIntermediateDataAsnRead’: objscoremat.c:339:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 339 | AsnReadFunc func; | ^~~~ objscoremat.c: In function ‘PssmFinalDataAsnRead’: objscoremat.c:548:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 548 | AsnReadFunc func; | ^~~~ objscoremat.c: In function ‘PssmParametersAsnRead’: objscoremat.c:766:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 766 | AsnReadFunc func; | ^~~~ objscoremat.c: In function ‘PssmWithParametersAsnRead’: objscoremat.c:946:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 946 | AsnReadFunc func; | ^~~~ objscoremat.c: In function ‘BlockPropertyAsnRead’: objscoremat.c:1113:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1113 | AsnReadFunc func; | ^~~~ objscoremat.c: In function ‘CoreBlockAsnRead’: objscoremat.c:1289:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1289 | AsnReadFunc func; | ^~~~ objscoremat.c: In function ‘LoopConstraintAsnRead’: objscoremat.c:1480:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1480 | AsnReadFunc func; | ^~~~ objscoremat.c: In function ‘CoreDefAsnRead’: objscoremat.c:1646:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1646 | AsnReadFunc func; | ^~~~ objscoremat.c: In function ‘FormatRpsDbParametersAsnRead’: objscoremat.c:1817:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1817 | AsnReadFunc func; | ^~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objseq.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objseq.h:48, from objseq.c:56: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objseq.c: In function ‘LinkageEvidenceAsnRead’: objseq.c:1609:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1609 | AsnReadFunc func; | ^~~~ objseq.c: In function ‘SeqGapAsnRead’: objseq.c:1764:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1764 | AsnReadFunc func; | ^~~~ objseq.c: In function ‘SeqDescrAsnWriteExtra’: objseq.c:2035:48: warning: variable ‘had_anp’ set but not used [-Wunused-but-set-variable] 2035 | Boolean retval = FALSE, had_extra = FALSE, had_anp = FALSE; | ^~~~~~~ objseq.c: In function ‘AnnotIdAsnWrite’: objseq.c:4841:9: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 4841 | else | ^~~~ objseq.c:4843:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 4843 | break; | ^~~~~ objseq.c:4849:9: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 4849 | else | ^~~~ objseq.c:4851:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 4851 | break; | ^~~~~ objseq.c: In function ‘AnnotDescAsnWrite’: objseq.c:5226:9: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 5226 | else | ^~~~ objseq.c:5228:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 5228 | break; | ^~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objblock.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objblock.h:70, from objblock.c:74: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objblock.c: In function ‘EMBLBlockFree’: objblock.c:900:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 900 | if (ebp == NULL) | ^~ objblock.c:903:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 903 | DateFree(ebp->creation_date); | ^~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objcode.c objcode.c:48:51: warning: "/*" within comment [-Wcomment] 48 | * environment variables to allow reading from data/*.val, replaced tabs in source code with spaces In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objcode.h:64, from objcode.c:105: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objsset.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objsset.h:48, from objsset.c:54: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objsset.c: In function ‘BioseqSetFree’: objsset.c:363:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 363 | if (bsp == NULL) | ^~ objsset.c:366:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 366 | if (bsp->idx.parentptr == NULL || bsp->idx.parenttype == OBJ_SEQSUB) { | ^~ objsset.c: In function ‘SeqEntryFree’: objsset.c:878:10: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 878 | else if (sep->choice == 2) | ^~ objsset.c:881:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 881 | return (SeqEntryPtr)MemFree(sep); | ^~~~~~ objsset.c: In function ‘SeqEntryFreeComponents’: objsset.c:898:10: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 898 | else if (sep->choice == 2) | ^~ objsset.c:901:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 901 | return sep; | ^~~~~~ objsset.c: In function ‘SeqEntryAsnGet’: objsset.c:1075:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1075 | if (retcode == 1) /* just after a Bioseq */ | ^~ objsset.c:1077:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1077 | av.ptrvalue = (Pointer) osp; | ^~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objsub.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/asnsubmt.h:9, from objsub.c:84: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objsub.c: In function ‘SubmitAsnLoad’: objsub.c:341:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 341 | if (loaded) | ^~ objsub.c:344:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 344 | if (! SeqSetAsnLoad ()) | ^~ objsub.c:347:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 347 | if (AsnLoad()) | ^~ objsub.c:350:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 350 | ObjMgrTypeLoad(OBJ_SEQSUB, "Seq-submit", seqsubtypename, "Sequence Data Submission", | ^~~~~~~~~~~~~~ objsub.c: In function ‘SeqSubmitAsnWrite’: objsub.c:455:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 455 | if (atp == NULL) | ^~ objsub.c:458:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 458 | if (ssp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objsub.c:462:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 462 | if (! AsnOpenStruct(aip, atp, (Pointer)ssp)) | ^~ objsub.c:465:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 465 | if (! SubmitBlockAsnWrite(ssp->sub, aip, SEQ_SUBMIT_sub)) goto erret; | ^~ objsub.c: In function ‘SeqSubmitAsnRead’: objsub.c:539:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 539 | if (atp == NULL) | ^~ objsub.c:542:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 542 | ssp = SeqSubmitNew(); | ^~~ objsub.c:543:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 543 | if (ssp == NULL) | ^~ objsub.c:546:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 546 | if (AsnReadVal(aip, atp, &av) <= 0) /* read the start struct */ | ^~ objsub.c: In function ‘SubmitBlockAsnWrite’: objsub.c:682:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 682 | if (atp == NULL) | ^~ objsub.c:685:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 685 | if (sbp == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objsub.c:689:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 689 | if (! AsnOpenStruct(aip, atp, (Pointer)sbp)) | ^~ objsub.c:692:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 692 | if (! ContactInfoAsnWrite(sbp->contact, aip, SUBMIT_BLOCK_contact)) | ^~ objsub.c: In function ‘SubmitBlockAsnRead’: objsub.c:770:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 770 | if (atp == NULL) | ^~ objsub.c:773:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 773 | oldatp = atp; | ^~~~~~ objsub.c:775:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 775 | if (sbp == NULL) | ^~ objsub.c:778:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 778 | if (AsnReadVal(aip, atp, &av) <= 0) /* read the start struct */ | ^~ objsub.c: In function ‘ContactInfoAsnWrite’: objsub.c:942:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 942 | if (atp == NULL) | ^~ objsub.c:945:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 945 | if (cip == NULL) { AsnNullValueMsg(aip, atp); goto erret; } | ^~ objsub.c:949:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 949 | if (! AsnOpenStruct(aip, atp, (Pointer)cip)) | ^~ objsub.c:952:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 952 | if (cip->name != NULL) | ^~ objsub.c: In function ‘ContactInfoAsnRead’: objsub.c:1068:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1068 | if (atp == NULL) | ^~ objsub.c:1070:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1070 | oldatp = atp; | ^~~~~~ objsub.c:1073:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1073 | if (cip == NULL) | ^~ objsub.c:1076:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1076 | if (AsnReadVal(aip, atp, &av) <= 0) /* read the start struct */ | ^~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objprt.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objprt.h:67, from objprt.c:81: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objprt.c: In function ‘PrintFormBooleanAsnRead’: objprt.c:892:13: warning: ‘ptr’ may be used uninitialized [-Wmaybe-uninitialized] 892 | ptr=PrintFormBooleanFree(ptr); | ^~~~~~~~~~~~~~~~~~~~~~~~~ objprt.c:853:29: note: ‘ptr’ was declared here 853 | PrintFormBooleanPtr ptr; | ^~~ objprt.c: In function ‘PrintFormEnumAsnRead’: objprt.c:1010:13: warning: ‘ptr’ may be used uninitialized [-Wmaybe-uninitialized] 1010 | ptr=PrintFormEnumFree(ptr); | ^~~~~~~~~~~~~~~~~~~~~~ objprt.c:969:26: note: ‘ptr’ was declared here 969 | PrintFormEnumPtr ptr; | ^~~ objprt.c: In function ‘PrintFormTextAsnRead’: objprt.c:1119:13: warning: ‘ptr’ may be used uninitialized [-Wmaybe-uninitialized] 1119 | ptr=PrintFormTextFree(ptr); | ^~~~~~~~~~~~~~~~~~~~~~ objprt.c:1086:26: note: ‘ptr’ was declared here 1086 | PrintFormTextPtr ptr; | ^~~ objprt.c: In function ‘PrintFormAsnRead’: objprt.c:600:15: warning: ‘vnp’ may be used uninitialized [-Wmaybe-uninitialized] 600 | vnp = PrintFormFree(vnp); | ^~~~~~~~~~~~~~~~~~ objprt.c:533:20: note: ‘vnp’ was declared here 533 | ValNodePtr vnp; | ^~~ objprt.c: In function ‘PrintFormatAsnRead’: objprt.c:435:13: warning: ‘ptr’ may be used uninitialized [-Wmaybe-uninitialized] 435 | ptr=PrintFormatFree(ptr); | ^~~~~~~~~~~~~~~~~~~~ objprt.c:379:24: note: ‘ptr’ was declared here 379 | PrintFormatPtr ptr; | ^~~ objprt.c: In function ‘PrintTemplateAsnRead’: objprt.c:250:13: warning: ‘ptr’ may be used uninitialized [-Wmaybe-uninitialized] 250 | ptr=PrintTemplateFree(ptr); | ^~~~~~~~~~~~~~~~~~~~~~ objprt.c:206:26: note: ‘ptr’ was declared here 206 | PrintTemplatePtr ptr; | ^~~ objprt.c: In function ‘PrintFormBlockAsnRead’: objprt.c:767:13: warning: ‘ptr’ may be used uninitialized [-Wmaybe-uninitialized] 767 | ptr=PrintFormBlockFree(ptr); | ^~~~~~~~~~~~~~~~~~~~~~~ objprt.c:707:27: note: ‘ptr’ was declared here 707 | PrintFormBlockPtr ptr; | ^~~ objprt.c: In function ‘UserFormatAsnRead’: objprt.c:1231:13: warning: ‘ptr’ may be used uninitialized [-Wmaybe-uninitialized] 1231 | ptr=UserFormatFree(ptr); | ^~~~~~~~~~~~~~~~~~~ objprt.c:1192:23: note: ‘ptr’ was declared here 1192 | UserFormatPtr ptr; | ^~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objfdef.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objfeat.h:48, from ../include/objfdef.h:48, from objfdef.c:43: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objalignloc.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from objalignloc.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objalignloc.c: In function ‘AlignLocSetAsnRead’: objalignloc.c:69:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 69 | AsnReadFunc func; | ^~~~ objalignloc.c: In function ‘Loc_locFree’: objalignloc.c:196:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 196 | Pointer pnt; | ^~~ objalignloc.c: In function ‘AlignLocAsnRead’: objalignloc.c:233:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 233 | AsnReadFunc func; | ^~~~ objalignloc.c:232:12: warning: unused variable ‘isError’ [-Wunused-variable] 232 | Boolean isError = FALSE; | ^~~~~~~ objalignloc.c: In function ‘Loc_locAsnRead’: objalignloc.c:313:12: warning: unused variable ‘isError’ [-Wunused-variable] 313 | Boolean isError = FALSE; | ^~~~~~~ objalignloc.c: In function ‘AlignIdFree’: objalignloc.c:527:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 527 | Pointer pnt; | ^~~ objalignloc.c: In function ‘AlignIdAsnRead’: objalignloc.c:559:12: warning: unused variable ‘isError’ [-Wunused-variable] 559 | Boolean isError = FALSE; | ^~~~~~~ objalignloc.c: In function ‘AlignBoxAsnRead’: objalignloc.c:750:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 750 | AsnReadFunc func; | ^~~~ objalignloc.c:749:12: warning: unused variable ‘isError’ [-Wunused-variable] 749 | Boolean isError = FALSE; | ^~~~~~~ objalignloc.c: In function ‘AlignRowsAsnRead’: objalignloc.c:932:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 932 | AsnReadFunc func; | ^~~~ objalignloc.c:931:12: warning: unused variable ‘isError’ [-Wunused-variable] 931 | Boolean isError = FALSE; | ^~~~~~~ objalignloc.c: In function ‘AlignColumnsAsnRead’: objalignloc.c:1096:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1096 | AsnReadFunc func; | ^~~~ objalignloc.c:1095:12: warning: unused variable ‘isError’ [-Wunused-variable] 1095 | Boolean isError = FALSE; | ^~~~~~~ objalignloc.c: In function ‘AlignIdAsnRead’: objalignloc.c:615:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 615 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objalignloc.c:558:10: note: ‘choice’ was declared here 558 | Uint1 choice; | ^~~~~~ In function ‘Loc_locAsnRead’, inlined from ‘AlignLocAsnRead’ at objalignloc.c:276:24: objalignloc.c:370:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 370 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objalignloc.c: In function ‘AlignLocAsnRead’: objalignloc.c:312:10: note: ‘choice’ was declared here 312 | Uint1 choice; | ^~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objtable.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from objtable.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objtable.c: In function ‘SeqTableColumnInfoAsnRead’: objtable.c:87:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 87 | AsnReadFunc func; | ^~~~ objtable.c:86:12: warning: unused variable ‘isError’ [-Wunused-variable] 86 | Boolean isError = FALSE; | ^~~~~~~ objtable.c: In function ‘SeqTableColumnAsnRead’: objtable.c:269:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 269 | AsnReadFunc func; | ^~~~ objtable.c:268:12: warning: unused variable ‘isError’ [-Wunused-variable] 268 | Boolean isError = FALSE; | ^~~~~~~ objtable.c: In function ‘SeqTableAsnRead’: objtable.c:474:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 474 | AsnReadFunc func; | ^~~~ objtable.c: In function ‘CommonStringTableAsnRead’: objtable.c:657:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 657 | AsnReadFunc func; | ^~~~ objtable.c: In function ‘CommonBytesTableAsnRead’: objtable.c:819:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 819 | AsnReadFunc func; | ^~~~ objtable.c: In function ‘SeqTableSingleDataFree’: objtable.c:1225:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 1225 | Pointer pnt; | ^~~ objtable.c: In function ‘SeqTableSingleDataAsnRead’: objtable.c:1269:12: warning: unused variable ‘isError’ [-Wunused-variable] 1269 | Boolean isError = FALSE; | ^~~~~~~ objtable.c: In function ‘SeqTableMultiDataAsnRead’: objtable.c:1111:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 1111 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objtable.c:1001:10: note: ‘choice’ was declared here 1001 | Uint1 choice; | ^~~~~~ objtable.c: In function ‘SeqTableSingleDataAsnRead’: objtable.c:1354:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 1354 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objtable.c:1268:10: note: ‘choice’ was declared here 1268 | Uint1 choice; | ^~~~~~ objtable.c: In function ‘SeqTableSparseIndexAsnRead’: objtable.c:1559:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 1559 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objtable.c:1505:10: note: ‘choice’ was declared here 1505 | Uint1 choice; | ^~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objpubme.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from objpubme.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objpubme.c: In function ‘PubmedEntryAsnRead’: objpubme.c:89:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 89 | AsnReadFunc func; | ^~~~ objpubme.c: In function ‘PubmedUrlAsnRead’: objpubme.c:288:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 288 | AsnReadFunc func; | ^~~~ objpubme.c:287:12: warning: unused variable ‘isError’ [-Wunused-variable] 287 | Boolean isError = FALSE; | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objmdrs.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from objmdrs.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objmdrs.c: In function ‘MedlarsEntryAsnRead’: objmdrs.c:85:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 85 | AsnReadFunc func; | ^~~~ objmdrs.c: In function ‘MedlarsRecordAsnRead’: objmdrs.c:259:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 259 | AsnReadFunc func; | ^~~~ objmdrs.c:258:12: warning: unused variable ‘isError’ [-Wunused-variable] 258 | Boolean isError = FALSE; | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objproj.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from objproj.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objproj.c: In function ‘ProjectAsnRead’: objproj.c:116:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 116 | AsnReadFunc func; | ^~~~ objproj.c:115:12: warning: unused variable ‘isError’ [-Wunused-variable] 115 | Boolean isError = FALSE; | ^~~~~~~ objproj.c: In function ‘ProjectDescrAsnRead’: objproj.c:720:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 720 | AsnReadFunc func; | ^~~~ objproj.c: In function ‘ProjdescFree’: objproj.c:857:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 857 | Pointer pnt; | ^~~ objproj.c: In function ‘ProjdescAsnRead’: objproj.c:898:12: warning: unused variable ‘isError’ [-Wunused-variable] 898 | Boolean isError = FALSE; | ^~~~~~~ In file included from ../include/strimprt.h:72, from ../include/mmdbapi1.h:234, from ../include/mmdbapi.h:92, from ../include/mapproj.h:45, from objproj.c:5: ../include/objmmdb1.h: At top level: ../include/objmmdb1.h:206:57: warning: ‘VersionOfDatabase_version_of_databaseFree’ declared ‘static’ but never defined [-Wunused-function] 206 | static VersionOfDatabase_version_of_databasePtr LIBCALL VersionOfDatabase_version_of_databaseFree PROTO ((VersionOfDatabase_version_of_databasePtr )); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb1.h:207:57: warning: ‘VersionOfDatabase_version_of_databaseAsnRead’ declared ‘static’ but never defined [-Wunused-function] 207 | static VersionOfDatabase_version_of_databasePtr LIBCALL VersionOfDatabase_version_of_databaseAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb1.h:208:24: warning: ‘VersionOfDatabase_version_of_databaseAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 208 | static Boolean LIBCALL VersionOfDatabase_version_of_databaseAsnWrite PROTO (( VersionOfDatabase_version_of_databasePtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from ../include/strimprt.h:73: ../include/objmmdb2.h:151:43: warning: ‘Coordinates_coordinatesFree’ declared ‘static’ but never defined [-Wunused-function] 151 | static Coordinates_coordinatesPtr LIBCALL Coordinates_coordinatesFree PROTO ((Coordinates_coordinatesPtr )); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb2.h:152:43: warning: ‘Coordinates_coordinatesAsnRead’ declared ‘static’ but never defined [-Wunused-function] 152 | static Coordinates_coordinatesPtr LIBCALL Coordinates_coordinatesAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb2.h:153:24: warning: ‘Coordinates_coordinatesAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 153 | static Boolean LIBCALL Coordinates_coordinatesAsnWrite PROTO (( Coordinates_coordinatesPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb2.h:247:35: warning: ‘Surface_surfaceFree’ declared ‘static’ but never defined [-Wunused-function] 247 | static Surface_surfacePtr LIBCALL Surface_surfaceFree PROTO ((Surface_surfacePtr )); | ^~~~~~~~~~~~~~~~~~~ ../include/objmmdb2.h:248:35: warning: ‘Surface_surfaceAsnRead’ declared ‘static’ but never defined [-Wunused-function] 248 | static Surface_surfacePtr LIBCALL Surface_surfaceAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb2.h:249:24: warning: ‘Surface_surfaceAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 249 | static Boolean LIBCALL Surface_surfaceAsnWrite PROTO (( Surface_surfacePtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from ../include/strimprt.h:74: ../include/objmmdb3.h:287:37: warning: ‘Location_locationFree’ declared ‘static’ but never defined [-Wunused-function] 287 | static Location_locationPtr LIBCALL Location_locationFree PROTO ((Location_locationPtr )); | ^~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb3.h:288:37: warning: ‘Location_locationAsnRead’ declared ‘static’ but never defined [-Wunused-function] 288 | static Location_locationPtr LIBCALL Location_locationAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb3.h:289:24: warning: ‘Location_locationAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 289 | static Boolean LIBCALL Location_locationAsnWrite PROTO (( Location_locationPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb3.h:310:37: warning: ‘Property_propertyFree’ declared ‘static’ but never defined [-Wunused-function] 310 | static Property_propertyPtr LIBCALL Property_propertyFree PROTO ((Property_propertyPtr )); | ^~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb3.h:311:37: warning: ‘Property_propertyAsnRead’ declared ‘static’ but never defined [-Wunused-function] 311 | static Property_propertyPtr LIBCALL Property_propertyAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb3.h:312:24: warning: ‘Property_propertyAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 312 | static Boolean LIBCALL Property_propertyAsnWrite PROTO (( Property_propertyPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb3.h:419:33: warning: ‘Region_regionFree’ declared ‘static’ but never defined [-Wunused-function] 419 | static Region_regionPtr LIBCALL Region_regionFree PROTO ((Region_regionPtr )); | ^~~~~~~~~~~~~~~~~ ../include/objmmdb3.h:420:33: warning: ‘Region_regionAsnRead’ declared ‘static’ but never defined [-Wunused-function] 420 | static Region_regionPtr LIBCALL Region_regionAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~ ../include/objmmdb3.h:421:24: warning: ‘Region_regionAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 421 | static Boolean LIBCALL Region_regionAsnWrite PROTO (( Region_regionPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~ objproj.c: In function ‘ProjdescAsnRead’: objproj.c:958:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 958 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objproj.c:897:10: note: ‘choice’ was declared here 897 | Uint1 choice; | ^~~~~~ objproj.c: In function ‘ProjectItemAsnRead’: objproj.c:536:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 536 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objproj.c:331:10: note: ‘choice’ was declared here 331 | Uint1 choice; | ^~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objgbseq.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from objgbseq.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objgbseq.c: In function ‘GBSetAsnRead’: objgbseq.c:69:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 69 | AsnReadFunc func; | ^~~~ objgbseq.c:66:12: warning: unused variable ‘av’ [-Wunused-variable] 66 | DataVal av; | ^~ objgbseq.c: In function ‘GBSeqAsnRead’: objgbseq.c:235:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 235 | AsnReadFunc func; | ^~~~ objgbseq.c: In function ‘GBReferenceAsnRead’: objgbseq.c:742:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 742 | AsnReadFunc func; | ^~~~ objgbseq.c: In function ‘GBCommentAsnRead’: objgbseq.c:983:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 983 | AsnReadFunc func; | ^~~~ objgbseq.c: In function ‘GBStrucCommentAsnRead’: objgbseq.c:1150:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1150 | AsnReadFunc func; | ^~~~ objgbseq.c: In function ‘GBFeatureAsnRead’: objgbseq.c:1321:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1321 | AsnReadFunc func; | ^~~~ objgbseq.c: In function ‘GBFeatureSetAsnRead’: objgbseq.c:1548:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1548 | AsnReadFunc func; | ^~~~ objgbseq.c: In function ‘GBAltSeqDataAsnRead’: objgbseq.c:1715:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1715 | AsnReadFunc func; | ^~~~ objgbseq.c: In function ‘GBXrefAsnRead’: objgbseq.c:1882:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1882 | AsnReadFunc func; | ^~~~ objgbseq.c:1881:12: warning: unused variable ‘isError’ [-Wunused-variable] 1881 | Boolean isError = FALSE; | ^~~~~~~ objgbseq.c: In function ‘GBStrucCommentItemAsnRead’: objgbseq.c:2053:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2053 | AsnReadFunc func; | ^~~~ objgbseq.c:2052:12: warning: unused variable ‘isError’ [-Wunused-variable] 2052 | Boolean isError = FALSE; | ^~~~~~~ objgbseq.c: In function ‘GBIntervalAsnRead’: objgbseq.c:2233:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2233 | AsnReadFunc func; | ^~~~ objgbseq.c:2232:12: warning: unused variable ‘isError’ [-Wunused-variable] 2232 | Boolean isError = FALSE; | ^~~~~~~ objgbseq.c: In function ‘GBQualifierAsnRead’: objgbseq.c:2447:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2447 | AsnReadFunc func; | ^~~~ objgbseq.c:2446:12: warning: unused variable ‘isError’ [-Wunused-variable] 2446 | Boolean isError = FALSE; | ^~~~~~~ objgbseq.c: In function ‘GBAltSeqItemAsnRead’: objgbseq.c:2622:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2622 | AsnReadFunc func; | ^~~~ objgbseq.c:2621:12: warning: unused variable ‘isError’ [-Wunused-variable] 2621 | Boolean isError = FALSE; | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objtseq.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from objtseq.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objtseq.c: In function ‘TSeqAsnRead’: objtseq.c:89:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 89 | AsnReadFunc func; | ^~~~ objtseq.c: In function ‘TSeqSetAsnRead’: objtseq.c:325:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 325 | AsnReadFunc func; | ^~~~ objtseq.c: In function ‘BioseqToTSeq’: objtseq.c:452:15: warning: variable ‘seqcode’ set but not used [-Wunused-but-set-variable] 452 | Uint1 seqcode; | ^~~~~~~ objtseq.c: In function ‘BioseqToMiniTSeq’: objtseq.c:564:15: warning: variable ‘seqcode’ set but not used [-Wunused-but-set-variable] 564 | Uint1 seqcode; | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objinsdseq.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from objinsdseq.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objinsdseq.c: In function ‘INSDSetAsnRead’: objinsdseq.c:69:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 69 | AsnReadFunc func; | ^~~~ objinsdseq.c:66:12: warning: unused variable ‘av’ [-Wunused-variable] 66 | DataVal av; | ^~ objinsdseq.c: In function ‘INSDSeqAsnRead’: objinsdseq.c:235:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 235 | AsnReadFunc func; | ^~~~ objinsdseq.c: In function ‘INSDReferenceAsnRead’: objinsdseq.c:742:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 742 | AsnReadFunc func; | ^~~~ objinsdseq.c: In function ‘INSDCommentAsnRead’: objinsdseq.c:983:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 983 | AsnReadFunc func; | ^~~~ objinsdseq.c: In function ‘INSDStrucCommentAsnRead’: objinsdseq.c:1150:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1150 | AsnReadFunc func; | ^~~~ objinsdseq.c: In function ‘INSDFeatureAsnRead’: objinsdseq.c:1321:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1321 | AsnReadFunc func; | ^~~~ objinsdseq.c: In function ‘INSDFeatureSetAsnRead’: objinsdseq.c:1548:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1548 | AsnReadFunc func; | ^~~~ objinsdseq.c: In function ‘INSDAltSeqDataAsnRead’: objinsdseq.c:1715:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1715 | AsnReadFunc func; | ^~~~ objinsdseq.c: In function ‘INSDXrefAsnRead’: objinsdseq.c:1882:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1882 | AsnReadFunc func; | ^~~~ objinsdseq.c:1881:12: warning: unused variable ‘isError’ [-Wunused-variable] 1881 | Boolean isError = FALSE; | ^~~~~~~ objinsdseq.c: In function ‘INSDStrucCommentItemAsnRead’: objinsdseq.c:2053:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2053 | AsnReadFunc func; | ^~~~ objinsdseq.c:2052:12: warning: unused variable ‘isError’ [-Wunused-variable] 2052 | Boolean isError = FALSE; | ^~~~~~~ objinsdseq.c: In function ‘INSDIntervalAsnRead’: objinsdseq.c:2233:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2233 | AsnReadFunc func; | ^~~~ objinsdseq.c:2232:12: warning: unused variable ‘isError’ [-Wunused-variable] 2232 | Boolean isError = FALSE; | ^~~~~~~ objinsdseq.c: In function ‘INSDQualifierAsnRead’: objinsdseq.c:2447:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2447 | AsnReadFunc func; | ^~~~ objinsdseq.c:2446:12: warning: unused variable ‘isError’ [-Wunused-variable] 2446 | Boolean isError = FALSE; | ^~~~~~~ objinsdseq.c: In function ‘INSDAltSeqItemAsnRead’: objinsdseq.c:2622:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2622 | AsnReadFunc func; | ^~~~ objinsdseq.c:2621:12: warning: unused variable ‘isError’ [-Wunused-variable] 2621 | Boolean isError = FALSE; | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objmacro.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from objmacro.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objmacro.c: In function ‘AECRActionAsnRead’: objmacro.c:87:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 87 | AsnReadFunc func; | ^~~~ objmacro.c:86:12: warning: unused variable ‘isError’ [-Wunused-variable] 86 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ParseActionAsnRead’: objmacro.c:272:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 272 | AsnReadFunc func; | ^~~~ objmacro.c:271:12: warning: unused variable ‘isError’ [-Wunused-variable] 271 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘MacroActionListAsnRead’: objmacro.c:478:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 478 | AsnReadFunc func; | ^~~~ objmacro.c:475:12: warning: unused variable ‘av’ [-Wunused-variable] 475 | DataVal av; | ^~ objmacro.c: In function ‘SuspectRuleSetAsnRead’: objmacro.c:595:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 595 | AsnReadFunc func; | ^~~~ objmacro.c:592:12: warning: unused variable ‘av’ [-Wunused-variable] 592 | DataVal av; | ^~ objmacro.c: In function ‘WordSubstitutionAsnRead’: objmacro.c:731:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 731 | AsnReadFunc func; | ^~~~ objmacro.c: In function ‘WordSubstitutionSetAsnRead’: objmacro.c:899:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 899 | AsnReadFunc func; | ^~~~ objmacro.c:896:12: warning: unused variable ‘av’ [-Wunused-variable] 896 | DataVal av; | ^~ objmacro.c: In function ‘StringConstraintAsnRead’: objmacro.c:1045:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1045 | AsnReadFunc func; | ^~~~ objmacro.c:1044:12: warning: unused variable ‘isError’ [-Wunused-variable] 1044 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘StringConstraintSetAsnRead’: objmacro.c:1307:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1307 | AsnReadFunc func; | ^~~~ objmacro.c:1304:12: warning: unused variable ‘av’ [-Wunused-variable] 1304 | DataVal av; | ^~ objmacro.c: In function ‘LocationPosConstraintFree’: objmacro.c:1403:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 1403 | Pointer pnt; | ^~~ objmacro.c: In function ‘LocationPosConstraintAsnRead’: objmacro.c:1432:12: warning: unused variable ‘isError’ [-Wunused-variable] 1432 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘LocationConstraintAsnRead’: objmacro.c:1633:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1633 | AsnReadFunc func; | ^~~~ objmacro.c:1632:12: warning: unused variable ‘isError’ [-Wunused-variable] 1632 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘FeatQualLegalValAsnRead’: objmacro.c:1849:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1849 | AsnReadFunc func; | ^~~~ objmacro.c:1848:12: warning: unused variable ‘isError’ [-Wunused-variable] 1848 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘FeatQualLegalValChoiceFree’: objmacro.c:1979:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 1979 | Pointer pnt; | ^~~ objmacro.c: In function ‘FeatQualLegalValChoiceAsnRead’: objmacro.c:2011:12: warning: unused variable ‘isError’ [-Wunused-variable] 2011 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘FeatQualLegalSetAsnRead’: objmacro.c:2165:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2165 | AsnReadFunc func; | ^~~~ objmacro.c:2162:12: warning: unused variable ‘av’ [-Wunused-variable] 2162 | DataVal av; | ^~ objmacro.c: In function ‘FeatQualChoiceFree’: objmacro.c:2261:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 2261 | Pointer pnt; | ^~~ objmacro.c: In function ‘FeatQualChoiceAsnRead’: objmacro.c:2293:12: warning: unused variable ‘isError’ [-Wunused-variable] 2293 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘FeatureFieldAsnRead’: objmacro.c:2474:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2474 | AsnReadFunc func; | ^~~~ objmacro.c:2473:12: warning: unused variable ‘isError’ [-Wunused-variable] 2473 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘FeatureFieldLegalAsnRead’: objmacro.c:2641:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2641 | AsnReadFunc func; | ^~~~ objmacro.c:2640:12: warning: unused variable ‘isError’ [-Wunused-variable] 2640 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘FeatureFieldPairAsnRead’: objmacro.c:2807:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2807 | AsnReadFunc func; | ^~~~ objmacro.c:2806:12: warning: unused variable ‘isError’ [-Wunused-variable] 2806 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘RnaFeatTypeFree’: objmacro.c:2950:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 2950 | Pointer pnt; | ^~~ objmacro.c: In function ‘RnaFeatTypeAsnRead’: objmacro.c:2982:12: warning: unused variable ‘isError’ [-Wunused-variable] 2982 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘RnaQualAsnRead’: objmacro.c:3232:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 3232 | AsnReadFunc func; | ^~~~ objmacro.c:3231:12: warning: unused variable ‘isError’ [-Wunused-variable] 3231 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘RnaQualPairAsnRead’: objmacro.c:3400:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 3400 | AsnReadFunc func; | ^~~~ objmacro.c:3399:12: warning: unused variable ‘isError’ [-Wunused-variable] 3399 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘SourceQualPairAsnRead’: objmacro.c:3576:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 3576 | AsnReadFunc func; | ^~~~ objmacro.c:3575:12: warning: unused variable ‘isError’ [-Wunused-variable] 3575 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘SourceQualChoiceFree’: objmacro.c:3704:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 3704 | Pointer pnt; | ^~~ objmacro.c: In function ‘SourceQualChoiceAsnRead’: objmacro.c:3733:12: warning: unused variable ‘isError’ [-Wunused-variable] 3733 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘SourceQualTextValAsnRead’: objmacro.c:3950:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 3950 | AsnReadFunc func; | ^~~~ objmacro.c:3949:12: warning: unused variable ‘isError’ [-Wunused-variable] 3949 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘SourceQualValChoiceFree’: objmacro.c:4080:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 4080 | Pointer pnt; | ^~~ objmacro.c: In function ‘SourceQualValChoiceAsnRead’: objmacro.c:4112:12: warning: unused variable ‘isError’ [-Wunused-variable] 4112 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘SourceQualValSetAsnRead’: objmacro.c:4310:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 4310 | AsnReadFunc func; | ^~~~ objmacro.c:4307:12: warning: unused variable ‘av’ [-Wunused-variable] 4307 | DataVal av; | ^~ objmacro.c: In function ‘CDSGeneProtFieldPairAsnRead’: objmacro.c:4442:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 4442 | AsnReadFunc func; | ^~~~ objmacro.c:4441:12: warning: unused variable ‘isError’ [-Wunused-variable] 4441 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘MolinfoFieldFree’: objmacro.c:4570:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 4570 | Pointer pnt; | ^~~ objmacro.c: In function ‘MolinfoFieldAsnRead’: objmacro.c:4599:12: warning: unused variable ‘isError’ [-Wunused-variable] 4599 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘MolinfoMoleculePairAsnRead’: objmacro.c:4826:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 4826 | AsnReadFunc func; | ^~~~ objmacro.c:4825:12: warning: unused variable ‘isError’ [-Wunused-variable] 4825 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘MolinfoTechniquePairAsnRead’: objmacro.c:4990:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 4990 | AsnReadFunc func; | ^~~~ objmacro.c:4989:12: warning: unused variable ‘isError’ [-Wunused-variable] 4989 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘MolinfoCompletednessPairAsnRead’: objmacro.c:5154:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 5154 | AsnReadFunc func; | ^~~~ objmacro.c:5153:12: warning: unused variable ‘isError’ [-Wunused-variable] 5153 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘MolinfoMolClassPairAsnRead’: objmacro.c:5318:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 5318 | AsnReadFunc func; | ^~~~ objmacro.c:5317:12: warning: unused variable ‘isError’ [-Wunused-variable] 5317 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘MolinfoTopologyPairAsnRead’: objmacro.c:5482:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 5482 | AsnReadFunc func; | ^~~~ objmacro.c:5481:12: warning: unused variable ‘isError’ [-Wunused-variable] 5481 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘MolinfoStrandPairAsnRead’: objmacro.c:5646:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 5646 | AsnReadFunc func; | ^~~~ objmacro.c:5645:12: warning: unused variable ‘isError’ [-Wunused-variable] 5645 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘MolinfoFieldPairFree’: objmacro.c:5774:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 5774 | Pointer pnt; | ^~~ objmacro.c: In function ‘MolinfoFieldPairAsnRead’: objmacro.c:5821:12: warning: unused variable ‘isError’ [-Wunused-variable] 5821 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘MolinfoFieldListAsnRead’: objmacro.c:6015:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 6015 | AsnReadFunc func; | ^~~~ objmacro.c:6012:12: warning: unused variable ‘av’ [-Wunused-variable] 6012 | DataVal av; | ^~ objmacro.c: In function ‘MolinfoFieldConstraintAsnRead’: objmacro.c:6149:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 6149 | AsnReadFunc func; | ^~~~ objmacro.c:6148:12: warning: unused variable ‘isError’ [-Wunused-variable] 6148 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘StructuredCommentFieldFree’: objmacro.c:6280:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 6280 | Pointer pnt; | ^~~ objmacro.c: In function ‘StructuredCommentFieldAsnRead’: objmacro.c:6312:12: warning: unused variable ‘isError’ [-Wunused-variable] 6312 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘StructuredCommentFieldPairAsnRead’: objmacro.c:6508:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 6508 | AsnReadFunc func; | ^~~~ objmacro.c:6507:12: warning: unused variable ‘isError’ [-Wunused-variable] 6507 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘DBLinkFieldPairAsnRead’: objmacro.c:6678:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 6678 | AsnReadFunc func; | ^~~~ objmacro.c:6677:12: warning: unused variable ‘isError’ [-Wunused-variable] 6677 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘PubFieldConstraintAsnRead’: objmacro.c:6843:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 6843 | AsnReadFunc func; | ^~~~ objmacro.c:6842:12: warning: unused variable ‘isError’ [-Wunused-variable] 6842 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘PubFieldSpecialConstraintTypeFree’: objmacro.c:6974:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 6974 | Pointer pnt; | ^~~ objmacro.c: In function ‘PubFieldSpecialConstraintTypeAsnRead’: objmacro.c:7003:12: warning: unused variable ‘isError’ [-Wunused-variable] 7003 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘PubFieldSpecialConstraintAsnRead’: objmacro.c:7220:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 7220 | AsnReadFunc func; | ^~~~ objmacro.c:7219:12: warning: unused variable ‘isError’ [-Wunused-variable] 7219 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘PublicationConstraintAsnRead’: objmacro.c:7389:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 7389 | AsnReadFunc func; | ^~~~ objmacro.c:7388:12: warning: unused variable ‘isError’ [-Wunused-variable] 7388 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘SourceConstraintAsnRead’: objmacro.c:7571:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 7571 | AsnReadFunc func; | ^~~~ objmacro.c:7570:12: warning: unused variable ‘isError’ [-Wunused-variable] 7570 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘CDSGeneProtPseudoConstraintAsnRead’: objmacro.c:7763:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 7763 | AsnReadFunc func; | ^~~~ objmacro.c:7762:12: warning: unused variable ‘isError’ [-Wunused-variable] 7762 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘CDSGeneProtConstraintFieldFree’: objmacro.c:7891:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 7891 | Pointer pnt; | ^~~ objmacro.c: In function ‘CDSGeneProtConstraintFieldAsnRead’: objmacro.c:7920:12: warning: unused variable ‘isError’ [-Wunused-variable] 7920 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘CDSGeneProtQualConstraintAsnRead’: objmacro.c:8095:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 8095 | AsnReadFunc func; | ^~~~ objmacro.c:8094:12: warning: unused variable ‘isError’ [-Wunused-variable] 8094 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘FieldConstraintAsnRead’: objmacro.c:8279:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 8279 | AsnReadFunc func; | ^~~~ objmacro.c:8278:12: warning: unused variable ‘isError’ [-Wunused-variable] 8278 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘FieldTypeFree’: objmacro.c:8413:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 8413 | Pointer pnt; | ^~~ objmacro.c: In function ‘FieldTypeAsnRead’: objmacro.c:8457:12: warning: unused variable ‘isError’ [-Wunused-variable] 8457 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘SequenceConstraintMolTypeConstraintFree’: objmacro.c:8666:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 8666 | Pointer pnt; | ^~~ objmacro.c: In function ‘SequenceConstraintMolTypeConstraintAsnRead’: objmacro.c:8695:12: warning: unused variable ‘isError’ [-Wunused-variable] 8695 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘QuantityConstraintFree’: objmacro.c:8875:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 8875 | Pointer pnt; | ^~~ objmacro.c: In function ‘QuantityConstraintAsnRead’: objmacro.c:8904:12: warning: unused variable ‘isError’ [-Wunused-variable] 8904 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘SequenceConstraintAsnRead’: objmacro.c:9104:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 9104 | AsnReadFunc func; | ^~~~ objmacro.c:9103:12: warning: unused variable ‘isError’ [-Wunused-variable] 9103 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘TranslationConstraintAsnRead’: objmacro.c:9332:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 9332 | AsnReadFunc func; | ^~~~ objmacro.c:9331:12: warning: unused variable ‘isError’ [-Wunused-variable] 9331 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ConstraintChoiceFree’: objmacro.c:9487:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 9487 | Pointer pnt; | ^~~ objmacro.c: In function ‘ConstraintChoiceAsnRead’: objmacro.c:9549:12: warning: unused variable ‘isError’ [-Wunused-variable] 9549 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ConstraintChoiceSetAsnRead’: objmacro.c:9783:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 9783 | AsnReadFunc func; | ^~~~ objmacro.c:9780:12: warning: unused variable ‘av’ [-Wunused-variable] 9780 | DataVal av; | ^~ objmacro.c: In function ‘TextMarkerFree’: objmacro.c:9879:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 9879 | Pointer pnt; | ^~~ objmacro.c: In function ‘TextMarkerAsnRead’: objmacro.c:9911:12: warning: unused variable ‘isError’ [-Wunused-variable] 9911 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘TextPortionAsnRead’: objmacro.c:10109:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 10109 | AsnReadFunc func; | ^~~~ objmacro.c:10108:12: warning: unused variable ‘isError’ [-Wunused-variable] 10108 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘FieldEditAsnRead’: objmacro.c:10328:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 10328 | AsnReadFunc func; | ^~~~ objmacro.c:10327:12: warning: unused variable ‘isError’ [-Wunused-variable] 10327 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘FieldPairTypeFree’: objmacro.c:10478:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 10478 | Pointer pnt; | ^~~ objmacro.c: In function ‘FieldPairTypeAsnRead’: objmacro.c:10528:12: warning: unused variable ‘isError’ [-Wunused-variable] 10528 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ApplyActionAsnRead’: objmacro.c:10747:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 10747 | AsnReadFunc func; | ^~~~ objmacro.c:10746:12: warning: unused variable ‘isError’ [-Wunused-variable] 10746 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘EditActionAsnRead’: objmacro.c:10927:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 10927 | AsnReadFunc func; | ^~~~ objmacro.c:10926:12: warning: unused variable ‘isError’ [-Wunused-variable] 10926 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘TextTransformFree’: objmacro.c:11061:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 11061 | Pointer pnt; | ^~~ objmacro.c: In function ‘TextTransformAsnRead’: objmacro.c:11096:12: warning: unused variable ‘isError’ [-Wunused-variable] 11096 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘TextTransformSetAsnRead’: objmacro.c:11269:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 11269 | AsnReadFunc func; | ^~~~ objmacro.c:11266:12: warning: unused variable ‘av’ [-Wunused-variable] 11266 | DataVal av; | ^~ objmacro.c: In function ‘ConvertActionAsnRead’: objmacro.c:11405:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 11405 | AsnReadFunc func; | ^~~~ objmacro.c:11404:12: warning: unused variable ‘isError’ [-Wunused-variable] 11404 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘CopyActionAsnRead’: objmacro.c:11600:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 11600 | AsnReadFunc func; | ^~~~ objmacro.c:11599:12: warning: unused variable ‘isError’ [-Wunused-variable] 11599 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘SwapActionAsnRead’: objmacro.c:11768:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 11768 | AsnReadFunc func; | ^~~~ objmacro.c:11767:12: warning: unused variable ‘isError’ [-Wunused-variable] 11767 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘AECRParseActionAsnRead’: objmacro.c:11932:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 11932 | AsnReadFunc func; | ^~~~ objmacro.c:11931:12: warning: unused variable ‘isError’ [-Wunused-variable] 11931 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘RemoveActionAsnRead’: objmacro.c:12151:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 12151 | AsnReadFunc func; | ^~~~ objmacro.c:12150:12: warning: unused variable ‘isError’ [-Wunused-variable] 12150 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘RemoveOutsideActionAsnRead’: objmacro.c:12312:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 12312 | AsnReadFunc func; | ^~~~ objmacro.c:12311:12: warning: unused variable ‘isError’ [-Wunused-variable] 12311 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ActionChoiceFree’: objmacro.c:12455:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 12455 | Pointer pnt; | ^~~ objmacro.c: In function ‘ActionChoiceAsnRead’: objmacro.c:12508:12: warning: unused variable ‘isError’ [-Wunused-variable] 12508 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ParseSrcOrgChoiceFree’: objmacro.c:12697:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 12697 | Pointer pnt; | ^~~ objmacro.c: In function ‘ParseSrcOrgChoiceAsnRead’: objmacro.c:12726:12: warning: unused variable ‘isError’ [-Wunused-variable] 12726 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ParseSrcOrgAsnRead’: objmacro.c:12911:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 12911 | AsnReadFunc func; | ^~~~ objmacro.c:12910:12: warning: unused variable ‘isError’ [-Wunused-variable] 12910 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ParseSrcGeneralIdFree’: objmacro.c:13042:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 13042 | Pointer pnt; | ^~~ objmacro.c: In function ‘ParseSrcGeneralIdAsnRead’: objmacro.c:13074:12: warning: unused variable ‘isError’ [-Wunused-variable] 13074 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ParseSrcFree’: objmacro.c:13232:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 13232 | Pointer pnt; | ^~~ objmacro.c: In function ‘ParseSrcAsnRead’: objmacro.c:13270:12: warning: unused variable ‘isError’ [-Wunused-variable] 13270 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ParseDstOrgAsnRead’: objmacro.c:13526:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 13526 | AsnReadFunc func; | ^~~~ objmacro.c:13525:12: warning: unused variable ‘isError’ [-Wunused-variable] 13525 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ParseDestFree’: objmacro.c:13657:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 13657 | Pointer pnt; | ^~~ objmacro.c: In function ‘ParseDestAsnRead’: objmacro.c:13695:12: warning: unused variable ‘isError’ [-Wunused-variable] 13695 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘LocationIntervalAsnRead’: objmacro.c:13905:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 13905 | AsnReadFunc func; | ^~~~ objmacro.c:13904:12: warning: unused variable ‘isError’ [-Wunused-variable] 13904 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘LocationChoiceFree’: objmacro.c:14033:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 14033 | Pointer pnt; | ^~~ objmacro.c: In function ‘LocationChoiceAsnRead’: objmacro.c:14065:12: warning: unused variable ‘isError’ [-Wunused-variable] 14065 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘SequenceListAsnRead’: objmacro.c:14241:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 14241 | AsnReadFunc func; | ^~~~ objmacro.c:14238:12: warning: unused variable ‘av’ [-Wunused-variable] 14238 | DataVal av; | ^~ objmacro.c: In function ‘SequenceListChoiceFree’: objmacro.c:14337:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 14337 | Pointer pnt; | ^~~ objmacro.c: In function ‘SequenceListChoiceAsnRead’: objmacro.c:14369:12: warning: unused variable ‘isError’ [-Wunused-variable] 14369 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ApplyFeatureActionAsnRead’: objmacro.c:14560:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 14560 | AsnReadFunc func; | ^~~~ objmacro.c:14559:12: warning: unused variable ‘isError’ [-Wunused-variable] 14559 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘RemoveFeatureActionAsnRead’: objmacro.c:14827:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 14827 | AsnReadFunc func; | ^~~~ objmacro.c:14826:12: warning: unused variable ‘isError’ [-Wunused-variable] 14826 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ConvertFromCDSOptionsAsnRead’: objmacro.c:14994:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 14994 | AsnReadFunc func; | ^~~~ objmacro.c:14993:12: warning: unused variable ‘isError’ [-Wunused-variable] 14993 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ConvertFeatureSrcOptionsFree’: objmacro.c:15131:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 15131 | Pointer pnt; | ^~~ objmacro.c: In function ‘ConvertFeatureSrcOptionsAsnRead’: objmacro.c:15163:12: warning: unused variable ‘isError’ [-Wunused-variable] 15163 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘RegionTypeAsnRead’: objmacro.c:15332:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 15332 | AsnReadFunc func; | ^~~~ objmacro.c:15331:12: warning: unused variable ‘isError’ [-Wunused-variable] 15331 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ConvertFeatureDstOptionsFree’: objmacro.c:15451:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 15451 | Pointer pnt; | ^~~ objmacro.c: In function ‘ConvertFeatureDstOptionsAsnRead’: objmacro.c:15486:12: warning: unused variable ‘isError’ [-Wunused-variable] 15486 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ConvertFeatureActionAsnRead’: objmacro.c:15702:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 15702 | AsnReadFunc func; | ^~~~ objmacro.c:15701:12: warning: unused variable ‘isError’ [-Wunused-variable] 15701 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘EditLocationStrandAsnRead’: objmacro.c:15911:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 15911 | AsnReadFunc func; | ^~~~ objmacro.c:15910:12: warning: unused variable ‘isError’ [-Wunused-variable] 15910 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘Partial5SetActionAsnRead’: objmacro.c:16075:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 16075 | AsnReadFunc func; | ^~~~ objmacro.c:16074:12: warning: unused variable ‘isError’ [-Wunused-variable] 16074 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘Partial3SetActionAsnRead’: objmacro.c:16239:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 16239 | AsnReadFunc func; | ^~~~ objmacro.c:16238:12: warning: unused variable ‘isError’ [-Wunused-variable] 16238 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘PartialBothSetActionAsnRead’: objmacro.c:16403:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 16403 | AsnReadFunc func; | ^~~~ objmacro.c:16402:12: warning: unused variable ‘isError’ [-Wunused-variable] 16402 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ExtendToFeatureAsnRead’: objmacro.c:16568:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 16568 | AsnReadFunc func; | ^~~~ objmacro.c:16567:12: warning: unused variable ‘isError’ [-Wunused-variable] 16567 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘LocationEditTypeFree’: objmacro.c:16708:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 16708 | Pointer pnt; | ^~~ objmacro.c: In function ‘LocationEditTypeAsnRead’: objmacro.c:16755:12: warning: unused variable ‘isError’ [-Wunused-variable] 16755 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘EditFeatureLocationActionAsnRead’: objmacro.c:17032:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 17032 | AsnReadFunc func; | ^~~~ objmacro.c:17031:12: warning: unused variable ‘isError’ [-Wunused-variable] 17031 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘MolinfoBlockAsnRead’: objmacro.c:17232:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 17232 | AsnReadFunc func; | ^~~~ objmacro.c:17231:12: warning: unused variable ‘isError’ [-Wunused-variable] 17231 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘RemoveDescriptorActionAsnRead’: objmacro.c:17415:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 17415 | AsnReadFunc func; | ^~~~ objmacro.c:17414:12: warning: unused variable ‘isError’ [-Wunused-variable] 17414 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘AutodefActionAsnRead’: objmacro.c:17584:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 17584 | AsnReadFunc func; | ^~~~ objmacro.c: In function ‘FixPubCapsActionAsnRead’: objmacro.c:17758:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 17758 | AsnReadFunc func; | ^~~~ objmacro.c:17757:12: warning: unused variable ‘isError’ [-Wunused-variable] 17757 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘SortFieldsActionAsnRead’: objmacro.c:17963:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 17963 | AsnReadFunc func; | ^~~~ objmacro.c:17962:12: warning: unused variable ‘isError’ [-Wunused-variable] 17962 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘FixAuthorCapsAsnRead’: objmacro.c:18142:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 18142 | AsnReadFunc func; | ^~~~ objmacro.c:18141:12: warning: unused variable ‘isError’ [-Wunused-variable] 18141 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘FixCapsActionFree’: objmacro.c:18261:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 18261 | Pointer pnt; | ^~~ objmacro.c: In function ‘FixCapsActionAsnRead’: objmacro.c:18296:12: warning: unused variable ‘isError’ [-Wunused-variable] 18296 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘FixFormatActionFree’: objmacro.c:18470:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 18470 | Pointer pnt; | ^~~ objmacro.c: In function ‘FixFormatActionAsnRead’: objmacro.c:18499:12: warning: unused variable ‘isError’ [-Wunused-variable] 18499 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘RemoveDuplicateFeatureActionAsnRead’: objmacro.c:18705:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 18705 | AsnReadFunc func; | ^~~~ objmacro.c:18704:12: warning: unused variable ‘isError’ [-Wunused-variable] 18704 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘GeneXrefTypeAsnRead’: objmacro.c:18899:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 18899 | AsnReadFunc func; | ^~~~ objmacro.c:18898:12: warning: unused variable ‘isError’ [-Wunused-variable] 18898 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘XrefTypeFree’: objmacro.c:19036:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 19036 | Pointer pnt; | ^~~ objmacro.c: In function ‘XrefTypeAsnRead’: objmacro.c:19068:12: warning: unused variable ‘isError’ [-Wunused-variable] 19068 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘RemoveXrefsActionAsnRead’: objmacro.c:19239:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 19239 | AsnReadFunc func; | ^~~~ objmacro.c:19238:12: warning: unused variable ‘isError’ [-Wunused-variable] 19238 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘MakeGeneXrefActionAsnRead’: objmacro.c:19410:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 19410 | AsnReadFunc func; | ^~~~ objmacro.c:19409:12: warning: unused variable ‘isError’ [-Wunused-variable] 19409 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘AuthorFixActionAsnRead’: objmacro.c:19578:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 19578 | AsnReadFunc func; | ^~~~ objmacro.c:19577:12: warning: unused variable ‘isError’ [-Wunused-variable] 19577 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘UpdateSequencesActionAsnRead’: objmacro.c:19747:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 19747 | AsnReadFunc func; | ^~~~ objmacro.c:19746:12: warning: unused variable ‘isError’ [-Wunused-variable] 19746 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘CreateTSAIdsSrcFree’: objmacro.c:19877:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 19877 | Pointer pnt; | ^~~ objmacro.c: In function ‘CreateTSAIdsSrcAsnRead’: objmacro.c:19909:12: warning: unused variable ‘isError’ [-Wunused-variable] 19909 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘CreateTSAIdsActionAsnRead’: objmacro.c:20092:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 20092 | AsnReadFunc func; | ^~~~ objmacro.c:20091:12: warning: unused variable ‘isError’ [-Wunused-variable] 20091 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘AutofixActionAsnRead’: objmacro.c:20274:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 20274 | AsnReadFunc func; | ^~~~ objmacro.c:20273:12: warning: unused variable ‘isError’ [-Wunused-variable] 20273 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘FixSetsActionFree’: objmacro.c:20395:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 20395 | Pointer pnt; | ^~~ objmacro.c: In function ‘FixSetsActionAsnRead’: objmacro.c:20424:12: warning: unused variable ‘isError’ [-Wunused-variable] 20424 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘TableMatchTypeFree’: objmacro.c:20582:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 20582 | Pointer pnt; | ^~~ objmacro.c: In function ‘TableMatchTypeAsnRead’: objmacro.c:20614:12: warning: unused variable ‘isError’ [-Wunused-variable] 20614 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘TableMatchAsnRead’: objmacro.c:20873:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 20873 | AsnReadFunc func; | ^~~~ objmacro.c:20872:12: warning: unused variable ‘isError’ [-Wunused-variable] 20872 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ApplyTableExtraDataFree’: objmacro.c:21004:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 21004 | Pointer pnt; | ^~~ objmacro.c: In function ‘ApplyTableExtraDataAsnRead’: objmacro.c:21033:12: warning: unused variable ‘isError’ [-Wunused-variable] 21033 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ApplyTableActionAsnRead’: objmacro.c:21210:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 21210 | AsnReadFunc func; | ^~~~ objmacro.c:21209:12: warning: unused variable ‘isError’ [-Wunused-variable] 21209 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘AddFileActionAsnRead’: objmacro.c:21411:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 21411 | AsnReadFunc func; | ^~~~ objmacro.c:21410:12: warning: unused variable ‘isError’ [-Wunused-variable] 21410 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘AddDescriptorListActionAsnRead’: objmacro.c:21582:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 21582 | AsnReadFunc func; | ^~~~ objmacro.c:21581:12: warning: unused variable ‘isError’ [-Wunused-variable] 21581 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘RemoveSequencesActionAsnRead’: objmacro.c:21753:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 21753 | AsnReadFunc func; | ^~~~ objmacro.c:21752:12: warning: unused variable ‘isError’ [-Wunused-variable] 21752 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘UpdateReplacedEcNumbersActionAsnRead’: objmacro.c:21911:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 21911 | AsnReadFunc func; | ^~~~ objmacro.c:21910:12: warning: unused variable ‘isError’ [-Wunused-variable] 21910 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘RetranslateCdsActionAsnRead’: objmacro.c:22084:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 22084 | AsnReadFunc func; | ^~~~ objmacro.c:22083:12: warning: unused variable ‘isError’ [-Wunused-variable] 22083 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘AdjustFeaturesForGapsActionAsnRead’: objmacro.c:22239:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 22239 | AsnReadFunc func; | ^~~~ objmacro.c:22238:12: warning: unused variable ‘isError’ [-Wunused-variable] 22238 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘MacroActionChoiceFree’: objmacro.c:22412:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 22412 | Pointer pnt; | ^~~ objmacro.c: In function ‘MacroActionChoiceAsnRead’: objmacro.c:22522:12: warning: unused variable ‘isError’ [-Wunused-variable] 22522 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘SearchFuncFree’: objmacro.c:23116:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 23116 | Pointer pnt; | ^~~ objmacro.c: In function ‘SearchFuncAsnRead’: objmacro.c:23154:12: warning: unused variable ‘isError’ [-Wunused-variable] 23154 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘SimpleReplaceAsnRead’: objmacro.c:23425:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 23425 | AsnReadFunc func; | ^~~~ objmacro.c:23424:12: warning: unused variable ‘isError’ [-Wunused-variable] 23424 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ReplaceFuncFree’: objmacro.c:23564:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 23564 | Pointer pnt; | ^~~ objmacro.c: In function ‘ReplaceFuncAsnRead’: objmacro.c:23599:12: warning: unused variable ‘isError’ [-Wunused-variable] 23599 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘ReplaceRuleAsnRead’: objmacro.c:23781:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 23781 | AsnReadFunc func; | ^~~~ objmacro.c:23780:12: warning: unused variable ‘isError’ [-Wunused-variable] 23780 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘SuspectRuleAsnRead’: objmacro.c:23955:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 23955 | AsnReadFunc func; | ^~~~ objmacro.c:23954:12: warning: unused variable ‘isError’ [-Wunused-variable] 23954 | Boolean isError = FALSE; | ^~~~~~~ objmacro.c: In function ‘SourceQualChoiceAsnRead’: objmacro.c:3806:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 3806 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:3732:10: note: ‘choice’ was declared here 3732 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘MolinfoFieldAsnRead’: objmacro.c:4679:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 4679 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:4598:10: note: ‘choice’ was declared here 4598 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘MolinfoFieldPairAsnRead’: objmacro.c:5883:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 5883 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:5820:10: note: ‘choice’ was declared here 5820 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘StructuredCommentFieldAsnRead’: objmacro.c:6371:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 6371 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:6311:10: note: ‘choice’ was declared here 6311 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘FieldTypeAsnRead’: objmacro.c:8543:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 8543 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:8456:10: note: ‘choice’ was declared here 8456 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘ConstraintChoiceAsnRead’: objmacro.c:9631:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 9631 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:9548:10: note: ‘choice’ was declared here 9548 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘TextTransformAsnRead’: objmacro.c:11149:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 11149 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:11095:10: note: ‘choice’ was declared here 11095 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘ParseSrcGeneralIdAsnRead’: objmacro.c:13133:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 13133 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:13073:10: note: ‘choice’ was declared here 13073 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘FixCapsActionAsnRead’: objmacro.c:18363:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 18363 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:18295:10: note: ‘choice’ was declared here 18295 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘FixFormatActionAsnRead’: objmacro.c:18565:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 18565 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:18498:10: note: ‘choice’ was declared here 18498 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘FixSetsActionAsnRead’: objmacro.c:20483:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 20483 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:20423:10: note: ‘choice’ was declared here 20423 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘MacroActionChoiceAsnRead’: objmacro.c:22829:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 22829 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:22521:10: note: ‘choice’ was declared here 22521 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘LocationPosConstraintAsnRead’: objmacro.c:1491:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 1491 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:1431:10: note: ‘choice’ was declared here 1431 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘FeatQualChoiceAsnRead’: objmacro.c:2342:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 2342 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:2292:10: note: ‘choice’ was declared here 2292 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘RnaFeatTypeAsnRead’: objmacro.c:3076:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 3076 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:2981:10: note: ‘choice’ was declared here 2981 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘SourceQualValChoiceAsnRead’: objmacro.c:4182:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 4182 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:4111:10: note: ‘choice’ was declared here 4111 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘PubFieldSpecialConstraintTypeAsnRead’: objmacro.c:7076:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 7076 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:7002:10: note: ‘choice’ was declared here 7002 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘SequenceConstraintMolTypeConstraintAsnRead’: objmacro.c:8768:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 8768 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:8694:10: note: ‘choice’ was declared here 8694 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘QuantityConstraintAsnRead’: objmacro.c:8963:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 8963 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:8903:10: note: ‘choice’ was declared here 8903 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘TextMarkerAsnRead’: objmacro.c:9970:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 9970 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:9910:10: note: ‘choice’ was declared here 9910 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘FieldPairTypeAsnRead’: objmacro.c:10594:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 10594 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:10527:10: note: ‘choice’ was declared here 10527 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘ActionChoiceAsnRead’: objmacro.c:12578:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 12578 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:12507:10: note: ‘choice’ was declared here 12507 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘ParseSrcOrgChoiceAsnRead’: objmacro.c:12778:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 12778 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:12725:10: note: ‘choice’ was declared here 12725 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘ParseSrcAsnRead’: objmacro.c:13365:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 13365 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:13269:10: note: ‘choice’ was declared here 13269 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘ParseDestAsnRead’: objmacro.c:13762:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 13762 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:13694:10: note: ‘choice’ was declared here 13694 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘LocationChoiceAsnRead’: objmacro.c:14121:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 14121 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:14064:10: note: ‘choice’ was declared here 14064 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘SequenceListChoiceAsnRead’: objmacro.c:14418:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 14418 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:14368:10: note: ‘choice’ was declared here 14368 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘ConvertFeatureDstOptionsAsnRead’: objmacro.c:15556:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 15556 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:15485:10: note: ‘choice’ was declared here 15485 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘LocationEditTypeAsnRead’: objmacro.c:16859:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 16859 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:16754:10: note: ‘choice’ was declared here 16754 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘CreateTSAIdsSrcAsnRead’: objmacro.c:19958:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 19958 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:19908:10: note: ‘choice’ was declared here 19908 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘TableMatchTypeAsnRead’: objmacro.c:20712:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 20712 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:20613:10: note: ‘choice’ was declared here 20613 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘SearchFuncAsnRead’: objmacro.c:23259:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 23259 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:23153:10: note: ‘choice’ was declared here 23153 | Uint1 choice; | ^~~~~~ objmacro.c: In function ‘ReplaceFuncAsnRead’: objmacro.c:23648:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 23648 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmacro.c:23598:10: note: ‘choice’ was declared here 23598 | Uint1 choice; | ^~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objent2.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from objent2.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objent2.c: In function ‘Entrez2IdListAsnRead’: objent2.c:87:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 87 | AsnReadFunc func; | ^~~~ objent2.c:86:12: warning: unused variable ‘isError’ [-Wunused-variable] 86 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2BooleanExpAsnRead’: objent2.c:277:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 277 | AsnReadFunc func; | ^~~~ objent2.c: In function ‘Entrez2BooleanElementFree’: objent2.c:416:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 416 | Pointer pnt; | ^~~ objent2.c: In function ‘Entrez2BooleanElementAsnRead’: objent2.c:457:12: warning: unused variable ‘isError’ [-Wunused-variable] 457 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2LimitsAsnRead’: objent2.c:666:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 666 | AsnReadFunc func; | ^~~~ objent2.c:665:12: warning: unused variable ‘isError’ [-Wunused-variable] 665 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2BooleanTermAsnRead’: objent2.c:844:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 844 | AsnReadFunc func; | ^~~~ objent2.c:843:12: warning: unused variable ‘isError’ [-Wunused-variable] 843 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2RequestAsnRead’: objent2.c:1041:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1041 | AsnReadFunc func; | ^~~~ objent2.c:1040:12: warning: unused variable ‘isError’ [-Wunused-variable] 1040 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘E2RequestFree’: objent2.c:1203:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 1203 | Pointer pnt; | ^~~ objent2.c: In function ‘E2RequestAsnRead’: objent2.c:1256:12: warning: unused variable ‘isError’ [-Wunused-variable] 1256 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2EvalBooleanAsnRead’: objent2.c:1493:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1493 | AsnReadFunc func; | ^~~~ objent2.c:1492:12: warning: unused variable ‘isError’ [-Wunused-variable] 1492 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2TermQueryAsnRead’: objent2.c:1670:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1670 | AsnReadFunc func; | ^~~~ objent2.c:1669:12: warning: unused variable ‘isError’ [-Wunused-variable] 1669 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2TermPosAsnRead’: objent2.c:1849:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1849 | AsnReadFunc func; | ^~~~ objent2.c:1848:12: warning: unused variable ‘isError’ [-Wunused-variable] 1848 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2HierQueryAsnRead’: objent2.c:2036:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2036 | AsnReadFunc func; | ^~~~ objent2.c:2035:12: warning: unused variable ‘isError’ [-Wunused-variable] 2035 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2GetLinksAsnRead’: objent2.c:2224:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2224 | AsnReadFunc func; | ^~~~ objent2.c:2223:12: warning: unused variable ‘isError’ [-Wunused-variable] 2223 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2IdAsnRead’: objent2.c:2419:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2419 | AsnReadFunc func; | ^~~~ objent2.c:2418:12: warning: unused variable ‘isError’ [-Wunused-variable] 2418 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2DtFilterAsnRead’: objent2.c:2584:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2584 | AsnReadFunc func; | ^~~~ objent2.c:2583:12: warning: unused variable ‘isError’ [-Wunused-variable] 2583 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2ReplyAsnRead’: objent2.c:2762:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2762 | AsnReadFunc func; | ^~~~ objent2.c:2761:12: warning: unused variable ‘isError’ [-Wunused-variable] 2761 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘E2ReplyFree’: objent2.c:2935:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 2935 | Pointer pnt; | ^~~ objent2.c: In function ‘E2ReplyAsnRead’: objent2.c:2991:12: warning: unused variable ‘isError’ [-Wunused-variable] 2991 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2InfoAsnRead’: objent2.c:3237:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 3237 | AsnReadFunc func; | ^~~~ objent2.c: In function ‘Entrez2BooleanReplyAsnRead’: objent2.c:3409:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 3409 | AsnReadFunc func; | ^~~~ objent2.c:3408:12: warning: unused variable ‘isError’ [-Wunused-variable] 3408 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2DocsumListAsnRead’: objent2.c:3587:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 3587 | AsnReadFunc func; | ^~~~ objent2.c: In function ‘Entrez2TermListAsnRead’: objent2.c:3749:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 3749 | AsnReadFunc func; | ^~~~ objent2.c: In function ‘Entrez2HierNodeAsnRead’: objent2.c:3922:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 3922 | AsnReadFunc func; | ^~~~ objent2.c: In function ‘Entrez2LinkSetAsnRead’: objent2.c:4122:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 4122 | AsnReadFunc func; | ^~~~ objent2.c:4121:12: warning: unused variable ‘isError’ [-Wunused-variable] 4121 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2LinkCountListAsnRead’: objent2.c:4299:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 4299 | AsnReadFunc func; | ^~~~ objent2.c: In function ‘Entrez2DbInfoAsnRead’: objent2.c:4466:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 4466 | AsnReadFunc func; | ^~~~ objent2.c: In function ‘Entrez2FieldInfoAsnRead’: objent2.c:4706:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 4706 | AsnReadFunc func; | ^~~~ objent2.c:4705:12: warning: unused variable ‘isError’ [-Wunused-variable] 4705 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2LinkInfoAsnRead’: objent2.c:4950:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 4950 | AsnReadFunc func; | ^~~~ objent2.c:4949:12: warning: unused variable ‘isError’ [-Wunused-variable] 4949 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2DocsumFieldInfoAsnRead’: objent2.c:5149:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 5149 | AsnReadFunc func; | ^~~~ objent2.c:5148:12: warning: unused variable ‘isError’ [-Wunused-variable] 5148 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2DocsumAsnRead’: objent2.c:5325:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 5325 | AsnReadFunc func; | ^~~~ objent2.c: In function ‘Entrez2DocsumDataAsnRead’: objent2.c:5488:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 5488 | AsnReadFunc func; | ^~~~ objent2.c:5487:12: warning: unused variable ‘isError’ [-Wunused-variable] 5487 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2TermAsnRead’: objent2.c:5655:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 5655 | AsnReadFunc func; | ^~~~ objent2.c:5654:12: warning: unused variable ‘isError’ [-Wunused-variable] 5654 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2LinkCountAsnRead’: objent2.c:5838:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 5838 | AsnReadFunc func; | ^~~~ objent2.c:5837:12: warning: unused variable ‘isError’ [-Wunused-variable] 5837 | Boolean isError = FALSE; | ^~~~~~~ objent2.c: In function ‘Entrez2BooleanElementAsnRead’: objent2.c:524:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 524 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objent2.c:456:10: note: ‘choice’ was declared here 456 | Uint1 choice; | ^~~~~~ objent2.c: In function ‘E2RequestAsnRead’: objent2.c:1333:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 1333 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objent2.c:1255:10: note: ‘choice’ was declared here 1255 | Uint1 choice; | ^~~~~~ objent2.c: In function ‘E2ReplyAsnRead’: objent2.c:3075:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 3075 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objent2.c:2990:10: note: ‘choice’ was declared here 2990 | Uint1 choice; | ^~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ent2api.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/ent2api.h:45, from ent2api.c:42: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF pmfapi.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from pmfapi.c:42: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ pmfapi.c:2813:24: warning: ‘SortByInt4’ defined but not used [-Wunused-function] 2813 | static int LIBCALLBACK SortByInt4 (VoidPtr vp1, VoidPtr vp2) | ^~~~~~~~~~ pmfapi.c: In function ‘ConfirmAccStrInSep’: pmfapi.c:1314:3: warning: ‘tmp’ may be used uninitialized [-Wmaybe-uninitialized] 1314 | SeqIdFree (tmp); | ^~~~~~~~~~~~~~~ pmfapi.c:1294:22: note: ‘tmp’ was declared here 1294 | SeqIdPtr sip, tmp; | ^~~ pmfapi.c: In function ‘PubMedSynchronousQuery’: pmfapi.c:1224:58: warning: ‘starttime’ may be used uninitialized [-Wmaybe-uninitialized] 1224 | printf ("PubMedWaitForReply %ld\n", (long) (stoptime - starttime)); | ~~~~~~~~~~^~~~~~~~~~~~ pmfapi.c:1187:19: note: ‘starttime’ was declared here 1187 | clock_t starttime; | ^~~~~~~~~ pmfapi.c: In function ‘PubSeqSynchronousQueryEx’: pmfapi.c:1479:58: warning: ‘starttime’ may be used uninitialized [-Wmaybe-uninitialized] 1479 | printf ("PubSeqWaitForReply %ld\n", (long) (stoptime - starttime)); | ~~~~~~~~~~^~~~~~~~~~~~ pmfapi.c:1434:16: note: ‘starttime’ was declared here 1434 | clock_t starttime; | ^~~~~~~~~ pmfapi.c: In function ‘PubSeqSynchronousQueryTI’: pmfapi.c:1663:58: warning: ‘starttime’ may be used uninitialized [-Wmaybe-uninitialized] 1663 | printf ("PubSeqWaitForReply %ld\n", (long) (stoptime - starttime)); | ~~~~~~~~~~^~~~~~~~~~~~ pmfapi.c:1622:16: note: ‘starttime’ was declared here 1622 | clock_t starttime; | ^~~~~~~~~ pmfapi.c: In function ‘PubSeqSynchronousQuerySRA’: pmfapi.c:1744:58: warning: ‘starttime’ may be used uninitialized [-Wmaybe-uninitialized] 1744 | printf ("PubSeqWaitForReply %ld\n", (long) (stoptime - starttime)); | ~~~~~~~~~~^~~~~~~~~~~~ pmfapi.c:1703:16: note: ‘starttime’ was declared here 1703 | clock_t starttime; | ^~~~~~~~~ pmfapi.c: In function ‘GiRevHistSynchronousQuery’: pmfapi.c:1817:61: warning: ‘starttime’ may be used uninitialized [-Wmaybe-uninitialized] 1817 | printf ("GiRevHistWaitForReply %ld\n", (long) (stoptime - starttime)); | ~~~~~~~~~~^~~~~~~~~~~~ pmfapi.c:1783:15: note: ‘starttime’ was declared here 1783 | clock_t starttime; | ^~~~~~~~~ pmfapi.c: In function ‘GiAccVerSynchronousQuery’: pmfapi.c:1869:60: warning: ‘starttime’ may be used uninitialized [-Wmaybe-uninitialized] 1869 | printf ("GiAccVerWaitForReply %ld\n", (long) (stoptime - starttime)); | ~~~~~~~~~~^~~~~~~~~~~~ pmfapi.c:1835:15: note: ‘starttime’ was declared here 1835 | clock_t starttime; | ^~~~~~~~~ pmfapi.c: In function ‘AccnRevHistSynchronousQuery’: pmfapi.c:1920:63: warning: ‘starttime’ may be used uninitialized [-Wmaybe-uninitialized] 1920 | printf ("AccnRevHistWaitForReply %ld\n", (long) (stoptime - starttime)); | ~~~~~~~~~~^~~~~~~~~~~~ pmfapi.c:1885:15: note: ‘starttime’ was declared here 1885 | clock_t starttime; | ^~~~~~~~~ pmfapi.c: In function ‘GiSeqIdSetSynchronousQuery’: pmfapi.c:1971:62: warning: ‘starttime’ may be used uninitialized [-Wmaybe-uninitialized] 1971 | printf ("GiSeqIdSetWaitForReply %ld\n", (long) (stoptime - starttime)); | ~~~~~~~~~~^~~~~~~~~~~~ pmfapi.c:1936:15: note: ‘starttime’ was declared here 1936 | clock_t starttime; | ^~~~~~~~~ pmfapi.c: In function ‘AccnListSynchronousQuery’: pmfapi.c:2021:60: warning: ‘starttime’ may be used uninitialized [-Wmaybe-uninitialized] 2021 | printf ("AccnListWaitForReply %ld\n", (long) (stoptime - starttime)); | ~~~~~~~~~~^~~~~~~~~~~~ pmfapi.c:1987:15: note: ‘starttime’ was declared here 1987 | clock_t starttime; | ^~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objtax3.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from objtax3.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objtax3.c: In function ‘Taxon3RequestAsnRead’: objtax3.c:86:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 86 | AsnReadFunc func; | ^~~~ objtax3.c: In function ‘T3RequestFree’: objtax3.c:200:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 200 | Pointer pnt; | ^~~ objtax3.c: In function ‘SequenceOfIntAsnRead’: objtax3.c:418:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 418 | AsnReadFunc func; | ^~~~ objtax3.c: In function ‘Taxon3ReplyAsnRead’: objtax3.c:547:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 547 | AsnReadFunc func; | ^~~~ objtax3.c: In function ‘T3ReplyFree’: objtax3.c:661:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 661 | Pointer pnt; | ^~~ objtax3.c: In function ‘T3ErrorAsnRead’: objtax3.c:872:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 872 | AsnReadFunc func; | ^~~~ objtax3.c: In function ‘T3DataAsnRead’: objtax3.c:1072:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1072 | AsnReadFunc func; | ^~~~ objtax3.c: In function ‘Value_valueFree’: objtax3.c:1253:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 1253 | Pointer pnt; | ^~~ objtax3.c: In function ‘T3StatusFlagsAsnRead’: objtax3.c:1283:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1283 | AsnReadFunc func; | ^~~~ objtax3.c: In function ‘T3RefreshFlagsAsnRead’: objtax3.c:1608:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1608 | AsnReadFunc func; | ^~~~ In file included from ../include/strimprt.h:72, from objtax3.c:5: ../include/objmmdb1.h: At top level: ../include/objmmdb1.h:206:57: warning: ‘VersionOfDatabase_version_of_databaseFree’ declared ‘static’ but never defined [-Wunused-function] 206 | static VersionOfDatabase_version_of_databasePtr LIBCALL VersionOfDatabase_version_of_databaseFree PROTO ((VersionOfDatabase_version_of_databasePtr )); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb1.h:207:57: warning: ‘VersionOfDatabase_version_of_databaseAsnRead’ declared ‘static’ but never defined [-Wunused-function] 207 | static VersionOfDatabase_version_of_databasePtr LIBCALL VersionOfDatabase_version_of_databaseAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb1.h:208:24: warning: ‘VersionOfDatabase_version_of_databaseAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 208 | static Boolean LIBCALL VersionOfDatabase_version_of_databaseAsnWrite PROTO (( VersionOfDatabase_version_of_databasePtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from ../include/strimprt.h:73: ../include/objmmdb2.h:151:43: warning: ‘Coordinates_coordinatesFree’ declared ‘static’ but never defined [-Wunused-function] 151 | static Coordinates_coordinatesPtr LIBCALL Coordinates_coordinatesFree PROTO ((Coordinates_coordinatesPtr )); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb2.h:152:43: warning: ‘Coordinates_coordinatesAsnRead’ declared ‘static’ but never defined [-Wunused-function] 152 | static Coordinates_coordinatesPtr LIBCALL Coordinates_coordinatesAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb2.h:153:24: warning: ‘Coordinates_coordinatesAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 153 | static Boolean LIBCALL Coordinates_coordinatesAsnWrite PROTO (( Coordinates_coordinatesPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb2.h:247:35: warning: ‘Surface_surfaceFree’ declared ‘static’ but never defined [-Wunused-function] 247 | static Surface_surfacePtr LIBCALL Surface_surfaceFree PROTO ((Surface_surfacePtr )); | ^~~~~~~~~~~~~~~~~~~ ../include/objmmdb2.h:248:35: warning: ‘Surface_surfaceAsnRead’ declared ‘static’ but never defined [-Wunused-function] 248 | static Surface_surfacePtr LIBCALL Surface_surfaceAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb2.h:249:24: warning: ‘Surface_surfaceAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 249 | static Boolean LIBCALL Surface_surfaceAsnWrite PROTO (( Surface_surfacePtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from ../include/strimprt.h:74: ../include/objmmdb3.h:287:37: warning: ‘Location_locationFree’ declared ‘static’ but never defined [-Wunused-function] 287 | static Location_locationPtr LIBCALL Location_locationFree PROTO ((Location_locationPtr )); | ^~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb3.h:288:37: warning: ‘Location_locationAsnRead’ declared ‘static’ but never defined [-Wunused-function] 288 | static Location_locationPtr LIBCALL Location_locationAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb3.h:289:24: warning: ‘Location_locationAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 289 | static Boolean LIBCALL Location_locationAsnWrite PROTO (( Location_locationPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb3.h:310:37: warning: ‘Property_propertyFree’ declared ‘static’ but never defined [-Wunused-function] 310 | static Property_propertyPtr LIBCALL Property_propertyFree PROTO ((Property_propertyPtr )); | ^~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb3.h:311:37: warning: ‘Property_propertyAsnRead’ declared ‘static’ but never defined [-Wunused-function] 311 | static Property_propertyPtr LIBCALL Property_propertyAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb3.h:312:24: warning: ‘Property_propertyAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 312 | static Boolean LIBCALL Property_propertyAsnWrite PROTO (( Property_propertyPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~~~~~ ../include/objmmdb3.h:419:33: warning: ‘Region_regionFree’ declared ‘static’ but never defined [-Wunused-function] 419 | static Region_regionPtr LIBCALL Region_regionFree PROTO ((Region_regionPtr )); | ^~~~~~~~~~~~~~~~~ ../include/objmmdb3.h:420:33: warning: ‘Region_regionAsnRead’ declared ‘static’ but never defined [-Wunused-function] 420 | static Region_regionPtr LIBCALL Region_regionAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~ ../include/objmmdb3.h:421:24: warning: ‘Region_regionAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 421 | static Boolean LIBCALL Region_regionAsnWrite PROTO (( Region_regionPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~ objtax3.c: In function ‘T3RequestAsnRead’: objtax3.c:297:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 297 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objtax3.c:237:10: note: ‘choice’ was declared here 237 | Uint1 choice; | ^~~~~~ objtax3.c: In function ‘T3ReplyAsnRead’: objtax3.c:741:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 741 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objtax3.c:695:10: note: ‘choice’ was declared here 695 | Uint1 choice; | ^~~~~~ In function ‘Value_valueAsnRead’, inlined from ‘T3StatusFlagsAsnRead’ at objtax3.c:1326:28: objtax3.c:1421:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 1421 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objtax3.c: In function ‘T3StatusFlagsAsnRead’: objtax3.c:1362:10: note: ‘choice’ was declared here 1362 | Uint1 choice; | ^~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF tax3api.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from tax3api.c:45: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ tax3api.c: In function ‘Tax3SynchronousQuery’: tax3api.c:189:27: warning: variable ‘t3’ set but not used [-Wunused-but-set-variable] 189 | time_t t1, t2, t3; | ^~ tax3api.c: In function ‘CheckSuggestedFixes’: tax3api.c:1030:20: warning: variable ‘tep’ set but not used [-Wunused-but-set-variable] 1030 | T3ErrorPtr tep; | ^~~ tax3api.c: In function ‘TryNewSuggestedFixes’: tax3api.c:1142:20: warning: variable ‘tep’ set but not used [-Wunused-but-set-variable] 1142 | T3ErrorPtr tep; | ^~~ tax3api.c: In function ‘RemoveSpeciesSpecific’: tax3api.c:1398:13: warning: unused variable ‘cp’ [-Wunused-variable] 1398 | CharPtr cp; | ^~ tax3api.c: At top level: tax3api.c:3399:13: warning: ‘AddBioSourcesToChecklist’ defined but not used [-Wunused-function] 3399 | static void AddBioSourcesToChecklist (ValNodePtr biop_list, ValNodePtr check_list) | ^~~~~~~~~~~~~~~~~~~~~~~~ tax3api.c:2699:16: warning: ‘MatchesGenBankSynonym’ defined but not used [-Wunused-function] 2699 | static Boolean MatchesGenBankSynonym (CharPtr txt, OrgRefPtr response_org) | ^~~~~~~~~~~~~~~~~~~~~ tax3api.c:2682:16: warning: ‘MatchesSynonym’ defined but not used [-Wunused-function] 2682 | static Boolean MatchesSynonym (CharPtr txt, OrgRefPtr response_org) | ^~~~~~~~~~~~~~ tax3api.c:2273:16: warning: ‘EndsWithSp’ defined but not used [-Wunused-function] 2273 | static Boolean EndsWithSp (CharPtr str) | ^~~~~~~~~~ tax3api.c:990:19: warning: ‘MakeTaxFixRequestList’ defined but not used [-Wunused-function] 990 | static ValNodePtr MakeTaxFixRequestList (ValNodePtr biop_list) | ^~~~~~~~~~~~~~~~~~~~~ tax3api.c:362:16: warning: ‘HasMisspellingFlag’ defined but not used [-Wunused-function] 362 | static Boolean HasMisspellingFlag (T3DataPtr t) | ^~~~~~~~~~~~~~~~~~ tax3api.c:298:13: warning: ‘SaveTaxon3Request’ defined but not used [-Wunused-function] 298 | static void SaveTaxon3Request (Taxon3RequestPtr t3rp, CharPtr path) | ^~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objegkludge.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from objegkludge.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objentgene.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from objentgene.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objentgene.c: In function ‘EntrezgeneAsnRead’: objentgene.c:103:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 103 | AsnReadFunc func; | ^~~~ objentgene.c: In function ‘EntrezgeneSetAsnRead’: objentgene.c:412:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 412 | AsnReadFunc func; | ^~~~ objentgene.c:409:12: warning: unused variable ‘av’ [-Wunused-variable] 409 | DataVal av; | ^~ objentgene.c: In function ‘GeneTrackAsnRead’: objentgene.c:547:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 547 | AsnReadFunc func; | ^~~~ objentgene.c: In function ‘GeneCommentaryAsnRead’: objentgene.c:768:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 768 | AsnReadFunc func; | ^~~~ objentgene.c: In function ‘Method_methodFree’: objentgene.c:1073:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 1073 | Pointer pnt; | ^~~ objentgene.c: In function ‘MapsAsnRead’: objentgene.c:1104:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1104 | AsnReadFunc func; | ^~~~ objentgene.c:1103:12: warning: unused variable ‘isError’ [-Wunused-variable] 1103 | Boolean isError = FALSE; | ^~~~~~~ objentgene.c: In function ‘Method_methodAsnRead’: objentgene.c:1184:12: warning: unused variable ‘isError’ [-Wunused-variable] 1184 | Boolean isError = FALSE; | ^~~~~~~ objentgene.c: In function ‘GeneSourceAsnRead’: objentgene.c:1426:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1426 | AsnReadFunc func; | ^~~~ objentgene.c:1425:12: warning: unused variable ‘isError’ [-Wunused-variable] 1425 | Boolean isError = FALSE; | ^~~~~~~ objentgene.c: In function ‘XtraTermsAsnRead’: objentgene.c:1641:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1641 | AsnReadFunc func; | ^~~~ objentgene.c:1640:12: warning: unused variable ‘isError’ [-Wunused-variable] 1640 | Boolean isError = FALSE; | ^~~~~~~ objentgene.c: In function ‘OtherSourceAsnRead’: objentgene.c:1812:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1812 | AsnReadFunc func; | ^~~~ objentgene.c:1811:12: warning: unused variable ‘isError’ [-Wunused-variable] 1811 | Boolean isError = FALSE; | ^~~~~~~ In function ‘Method_methodAsnRead’, inlined from ‘MapsAsnRead’ at objentgene.c:1147:30: objentgene.c:1236:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 1236 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objentgene.c: In function ‘MapsAsnRead’: objentgene.c:1183:10: note: ‘choice’ was declared here 1183 | Uint1 choice; | ^~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objmla2.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from objmla2.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objmla2.c: In function ‘Mla2RequestFree’: objmla2.c:49:12: warning: variable ‘pnt’ set but not used [-Wunused-but-set-variable] 49 | Pointer pnt; | ^~~ objmla2.c: In function ‘Mla22RequestAsnRead’: objmla2.c:96:12: warning: unused variable ‘isError’ [-Wunused-variable] 96 | Boolean isError = FALSE; | ^~~~~~~ objmla2.c: In function ‘TitleMsg2AsnRead’: objmla2.c:447:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 447 | AsnReadFunc func; | ^~~~ objmla2.c:446:12: warning: unused variable ‘isError’ [-Wunused-variable] 446 | Boolean isError = FALSE; | ^~~~~~~ objmla2.c: In function ‘TitleMsgList2AsnRead’: objmla2.c:613:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 613 | AsnReadFunc func; | ^~~~ objmla2.c: In function ‘Mla22RequestAsnRead’: objmla2.c:249:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 249 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmla2.c:95:10: note: ‘choice’ was declared here 95 | Uint1 choice; | ^~~~~~ objmla2.c: In function ‘Mla2BackAsnRead’: objmla2.c:904:16: warning: ‘choice’ may be used uninitialized [-Wmaybe-uninitialized] 904 | anp->choice = choice; | ~~~~~~~~~~~~^~~~~~~~ objmla2.c:787:10: note: ‘choice’ was declared here 787 | Uint1 choice; | ^~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF mla2api.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/mla2api.h:45, from mla2api.c:42: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF qblastapi.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from qblastapi.c:123: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ qblastapi.c: In function ‘SecondQBlastCallback’: qblastapi.c:262:15: warning: variable ‘waiting’ set but not used [-Wunused-but-set-variable] 262 | Boolean waiting = FALSE; | ^~~~~~~ qblastapi.c: In function ‘BLASTGetSeqAnnotByRIDEx’: qblastapi.c:826:18: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 826 | EIO_Status status; | ^~~~~~ qblastapi.c: In function ‘BLASTGetQueryBioseqByRIDEx’: qblastapi.c:871:18: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 871 | EIO_Status status; | ^~~~~~ qblastapi.c: In function ‘QBlastCheckQueue’: qblastapi.c:688:36: warning: ‘&FORMAT_OBJECT=Alignment&FOR...’ directive writing 43 bytes into a region of size between 5 and 68 [-Wformat-overflow=] 688 | sprintf (str, "CMD=Get&RID=%s&FORMAT_OBJECT=Alignment&FORMAT_TYPE=ASN.1\n", curr->rid); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from ../include/ncbilcl.h:154: In function ‘sprintf’, inlined from ‘QBlastCheckQueue’ at qblastapi.c:688:7: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 56 and 119 bytes into a destination of size 80 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF vecscnapi.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from vecscnapi.c:42: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objmim.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from objmim.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objmim.c: In function ‘MimSetAsnRead’: objmim.c:86:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 86 | AsnReadFunc func; | ^~~~ objmim.c: In function ‘MimDateAsnRead’: objmim.c:248:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 248 | AsnReadFunc func; | ^~~~ objmim.c:247:12: warning: unused variable ‘isError’ [-Wunused-variable] 247 | Boolean isError = FALSE; | ^~~~~~~ objmim.c: In function ‘MimEntryAsnRead’: objmim.c:448:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 448 | AsnReadFunc func; | ^~~~ objmim.c: In function ‘MimCitAsnRead’: objmim.c:909:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 909 | AsnReadFunc func; | ^~~~ objmim.c:908:12: warning: unused variable ‘isError’ [-Wunused-variable] 908 | Boolean isError = FALSE; | ^~~~~~~ objmim.c: In function ‘MimTextAsnRead’: objmim.c:1096:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1096 | AsnReadFunc func; | ^~~~ objmim.c:1095:12: warning: unused variable ‘isError’ [-Wunused-variable] 1095 | Boolean isError = FALSE; | ^~~~~~~ objmim.c: In function ‘MimEditItemAsnRead’: objmim.c:1276:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1276 | AsnReadFunc func; | ^~~~ objmim.c:1275:12: warning: unused variable ‘isError’ [-Wunused-variable] 1275 | Boolean isError = FALSE; | ^~~~~~~ objmim.c: In function ‘MimAllelicVariantAsnRead’: objmim.c:1448:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1448 | AsnReadFunc func; | ^~~~ objmim.c: In function ‘MimIndexTermAsnRead’: objmim.c:1640:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1640 | AsnReadFunc func; | ^~~~ objmim.c: In function ‘MimReferenceAsnRead’: objmim.c:1819:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1819 | AsnReadFunc func; | ^~~~ objmim.c: In function ‘MimLinkAsnRead’: objmim.c:2195:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2195 | AsnReadFunc func; | ^~~~ objmim.c:2194:12: warning: unused variable ‘isError’ [-Wunused-variable] 2194 | Boolean isError = FALSE; | ^~~~~~~ objmim.c: In function ‘MimAuthorAsnRead’: objmim.c:2369:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2369 | AsnReadFunc func; | ^~~~ objmim.c:2368:12: warning: unused variable ‘isError’ [-Wunused-variable] 2368 | Boolean isError = FALSE; | ^~~~~~~ objmim.c: In function ‘MimPageAsnRead’: objmim.c:2535:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 2535 | AsnReadFunc func; | ^~~~ objmim.c:2534:12: warning: unused variable ‘isError’ [-Wunused-variable] 2534 | Boolean isError = FALSE; | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objvalid.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from objvalid.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objvalid.c: In function ‘FieldRuleAsnRead’: objvalid.c:88:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 88 | AsnReadFunc func; | ^~~~ objvalid.c:87:12: warning: unused variable ‘isError’ [-Wunused-variable] 87 | Boolean isError = FALSE; | ^~~~~~~ objvalid.c: In function ‘FieldSetAsnRead’: objvalid.c:259:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 259 | AsnReadFunc func; | ^~~~ objvalid.c:256:12: warning: unused variable ‘av’ [-Wunused-variable] 256 | DataVal av; | ^~ objvalid.c: In function ‘DependentFieldRuleAsnRead’: objvalid.c:396:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 396 | AsnReadFunc func; | ^~~~ objvalid.c:395:12: warning: unused variable ‘isError’ [-Wunused-variable] 395 | Boolean isError = FALSE; | ^~~~~~~ objvalid.c: In function ‘DependentFieldSetAsnRead’: objvalid.c:582:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 582 | AsnReadFunc func; | ^~~~ objvalid.c:579:12: warning: unused variable ‘av’ [-Wunused-variable] 579 | DataVal av; | ^~ objvalid.c: In function ‘CommentRuleAsnRead’: objvalid.c:721:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 721 | AsnReadFunc func; | ^~~~ objvalid.c:720:12: warning: unused variable ‘isError’ [-Wunused-variable] 720 | Boolean isError = FALSE; | ^~~~~~~ objvalid.c: In function ‘CommentSetAsnRead’: objvalid.c:926:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 926 | AsnReadFunc func; | ^~~~ objvalid.c:923:12: warning: unused variable ‘av’ [-Wunused-variable] 923 | DataVal av; | ^~ objvalid.c: In function ‘PhraseListAsnRead’: objvalid.c:1043:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 1043 | AsnReadFunc func; | ^~~~ objvalid.c:1040:12: warning: unused variable ‘av’ [-Wunused-variable] 1040 | DataVal av; | ^~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF mimapi.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from mimapi.c:45: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF cddapi.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from cddapi.c:45: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF seqport.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objsset.h:48, from ../include/sequtil.h:43, from ../include/seqport.h:47, from seqport.c:54: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ seqport.c: In function ‘productLoc_to_locationLoc’: seqport.c:4260:13: warning: variable ‘is_cdregion’ set but not used [-Wunused-but-set-variable] 4260 | Boolean is_cdregion = FALSE; | ^~~~~~~~~~~ seqport.c: In function ‘NaLocFromNaInterval’: seqport.c:4590:8: warning: variable ‘p_end_pos’ set but not used [-Wunused-but-set-variable] 4590 | Int4 p_end_pos; /*the end of the product sequence in the current loc*/ | ^~~~~~~~~ seqport.c: In function ‘dnaLoc_to_aaLoc’: seqport.c:4706:18: warning: variable ‘cds_right’ set but not used [-Wunused-but-set-variable] 4706 | Int4 cds_left, cds_right; | ^~~~~~~~~ seqport.c:4706:8: warning: variable ‘cds_left’ set but not used [-Wunused-but-set-variable] 4706 | Int4 cds_left, cds_right; | ^~~~~~~~ seqport.c: In function ‘DeltaRevComp’: seqport.c:5388:21: warning: variable ‘dspnext’ set but not used [-Wunused-but-set-variable] 5388 | DeltaSeqPtr dsp, dspnext; | ^~~~~~~ seqport.c: In function ‘SeqSearchEnterNucWord’: seqport.c:6943:18: warning: variable ‘patLen’ set but not used [-Wunused-but-set-variable] 6943 | Int2 next, patLen, state; | ^~~~~~ seqport.c: In function ‘ProtSearchEnterProtWord’: seqport.c:7817:18: warning: variable ‘patLen’ set but not used [-Wunused-but-set-variable] 7817 | Int2 next, patLen, state; | ^~~~~~ In file included from ../include/samutil.h:234, from ../include/alignmgr2.h:114, from seqport.c:62: ../include/objalignloc.h: At top level: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF sequtil.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objsset.h:48, from ../include/sequtil.h:43, from sequtil.c:53: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ sequtil.c: In function ‘GetPointsForLeftAndRightOffsets’: sequtil.c:7994:11: warning: variable ‘first_strand’ set but not used [-Wunused-but-set-variable] 7994 | Uint1 first_strand, last_strand; | ^~~~~~~~~~~~ sequtil.c: In function ‘SeqPointWriteEx’: sequtil.c:8532:15: warning: variable ‘fuzzlen’ set but not used [-Wunused-but-set-variable] 8532 | Int4 fuzzlen, id_len; | ^~~~~~~ sequtil.c: In function ‘TaxNameFromCommon’: sequtil.c:8687:42: warning: missing braces around initializer [-Wmissing-braces] 8687 | static Nlm_TaxCommon taxcommon[40] = { | ^ 8688 | "Chinese hamsters", "Cricetulus sp." | { 8689 | ,"Syrian golden hamsters", "Mesocricetus auratus" | }{ 8690 | ,"Syrian hamsters", "Mesocricetus sp." | }{ 8691 | ,"barley", "Hordeum sp." | }{ 8692 | ,"carrots", "Daucus sp." | }{ 8693 | ,"cats", "Felis sp." | }{ 8694 | ,"cattles", "Bos sp." | }{ 8695 | ,"chickens", "Gallus sp." | }{ 8696 | ,"chimpanzees", "Pan sp." | }{ 8697 | ,"chimpanzes", "Pan sp." | }{ 8698 | ,"corn", "Zea sp." | }{ 8699 | ,"cucumber", "Cucumis sativus" | }{ 8700 | ,"dogs", "Canis sp." | }{ 8701 | ,"goats", "Capra sp." | }{ 8702 | ,"gorillas", "Gorilla sp." | }{ 8703 | ,"guinea pigs", "Cavia sp." | }{ 8704 | ,"hamsters", "Cricetidae gen. sp." | }{ 8705 | ,"horses", "Equus sp." | }{ 8706 | ,"humans", "Homo sapiens" | }{ 8707 | ,"maize", "Zea sp." | }{ 8708 | ,"mice", "Mus sp." | }{ 8709 | ,"mouse", "Mus sp." | }{ 8710 | ,"peas", "Pisum sp." | }{ 8711 | ,"potatoes", "Solanum sp." | }{ 8712 | ,"potato", "Solanum sp." | }{ 8713 | ,"quails", "Phasianidae gen. sp." | }{ 8714 | ,"rabbits", "Oryctolagus sp." | }{ 8715 | ,"rats", "Rattus sp." | }{ 8716 | ,"rices", "Oryza sp." | }{ 8717 | ,"sheeps", "Ovis sp." | }{ 8718 | ,"sorghums", "Sorghum sp." | }{ 8719 | ,"soybeans", "Glycine sp." | }{ 8720 | ,"spinach", "Spinacia sp." | }{ 8721 | ,"swine", "Sus sp." | }{ 8722 | ,"tobacco", "Nicotiania sp." | }{ 8723 | ,"tomatoes", "Lycopersicon sp." | }{ 8724 | ,"tomato", "Lycopersicon sp." | }{ 8725 | ,"turkeys", "Meleagris sp." | }{ 8726 | ,"wheat", "Triticum sp." | }{ 8727 | ,"zebrafish", "Brachydanio sp." | }{ 8728 | }; | } sequtil.c: In function ‘GetBestScoreAndEvalueFromScorePtr’: sequtil.c:9510:48: warning: variable ‘sum_set’ set but not used [-Wunused-but-set-variable] 9510 | Boolean score_set=FALSE, evalue_set=FALSE, sum_set=FALSE, bit_set=FALSE; | ^~~~~~~ sequtil.c: In function ‘SeqIdFromAccessionEx’: sequtil.c:10110:38: warning: variable ‘sip2’ set but not used [-Wunused-but-set-variable] 10110 | SeqIdPtr sip2; | ^~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF prtutil.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objprt.h:67, from ../include/prtutil.h:69, from prtutil.c:81: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ prtutil.c: In function ‘StdFormatPrint’: prtutil.c:1422:17: warning: unused variable ‘ptr’ [-Wunused-variable] 1422 | CharPtr ptr = NULL; | ^~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF simple.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/simple.h:63, from simple.c:68: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from simple.c:69: ../include/all.h:7293:9: warning: "RNA_QUAL" redefined 7293 | #define RNA_QUAL &at[2254] | ^~~~~~~~ ../include/all.h:5823:9: note: this is the location of the previous definition 5823 | #define RNA_QUAL &at[1025] | ^~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF tofasta.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objsset.h:48, from ../include/sequtil.h:43, from ../include/seqport.h:47, from ../include/tofasta.h:47, from tofasta.c:44: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ tofasta.c: In function ‘DoSpecialDefline’: tofasta.c:1461:22: warning: variable ‘gene’ set but not used [-Wunused-but-set-variable] 1461 | SeqFeatPtr gene = NULL; | ^~~~ tofasta.c: In function ‘FastaIdEx’: tofasta.c:3100:15: warning: variable ‘sip’ set but not used [-Wunused-but-set-variable] 3100 | SeqIdPtr sip; | ^~~ tofasta.c: In function ‘CreateDefLineExEx’: tofasta.c:4991:13: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 4991 | if (vnp != NULL) | ^~ tofasta.c:4993:15: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 4993 | if (title != NULL) { | ^~ tofasta.c: In function ‘x_SetSuffix’: tofasta.c:8313:24: warning: variable ‘buf2’ set but not used [-Wunused-but-set-variable] 8313 | Char buf1 [512], buf2 [256]; | ^~~~ tofasta.c: In function ‘FastaToSeqEntryInternalExEx’: tofasta.c:2838:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2838 | fgets(buffer+1, BuffSize, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tofasta.c:2863:13: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2863 | fgets(buffer+i+1, FTSE_BUFF_CHUNK, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tofasta.c: At top level: tofasta.c:8058:17: warning: ‘x_StringInList’ defined but not used [-Wunused-function] 8058 | static Boolean x_StringInList ( | ^~~~~~~~~~~~~~ tofasta.c:3661:19: warning: ‘GatherGenesForCDS’ defined but not used [-Wunused-function] 3661 | static ValNodePtr GatherGenesForCDS(SeqLocPtr slp) | ^~~~~~~~~~~~~~~~~ tofasta.c:3627:19: warning: ‘GatherSeqFeatProt’ defined but not used [-Wunused-function] 3627 | static SeqFeatPtr GatherSeqFeatProt(BioseqPtr bsp) | ^~~~~~~~~~~~~~~~~ tofasta.c:3541:19: warning: ‘GetCDSProtUnindexed’ defined but not used [-Wunused-function] 3541 | static SeqFeatPtr GetCDSProtUnindexed ( | ^~~~~~~~~~~~~~~~~~~ tofasta.c:3378:19: warning: ‘IndexedGatherDescrOnBioseq’ defined but not used [-Wunused-function] 3378 | static ValNodePtr IndexedGatherDescrOnBioseq (ItemInfoPtr iip, BioseqPtr bsp, Uint1 choice) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ tofasta.c:3283:16: warning: ‘get_descr’ defined but not used [-Wunused-function] 3283 | static Boolean get_descr (GatherContextPtr gcp) | ^~~~~~~~~ tofasta.c:3254:16: warning: ‘get_descr_on_top’ defined but not used [-Wunused-function] 3254 | static Boolean get_descr_on_top (GatherContextPtr gcp) | ^~~~~~~~~~~~~~~~ tofasta.c: In function ‘FastaToSeqEntryInternalExEx’: tofasta.c:2866:29: warning: ‘firstchar’ may be used uninitialized [-Wmaybe-uninitialized] 2866 | for(i =0; (ch = *firstchar) != NULLB; firstchar++, i++) { | ^~~~~~~~~~ tofasta.c:2774:25: note: ‘firstchar’ was declared here 2774 | const Char PNTR firstchar; | ^~~~~~~~~ tofasta.c:2954:13: warning: ‘fd’ may be used uninitialized [-Wmaybe-uninitialized] 2954 | ungetc(ch, fd); | ^~~~~~~~~~~~~~ tofasta.c:2773:21: note: ‘fd’ was declared here 2773 | FILE *fd; | ^~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF tofile.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from tofile.c:78: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF tomedlin.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objmedli.h:80, from tomedlin.c:153: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF valid.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from valid.c:54: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ valid.c: In function ‘GetUserFieldValueString’: valid.c:2212:21: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘Nlm_Int8’ {aka ‘long long int’} [-Wformat=] 2212 | sprintf (buf, "%d", ufp->data.intvalue); | ~^ ~~~~~~~~~~~~~~~~~~ | | | | int Nlm_Int8 {aka long long int} | %lld valid.c: In function ‘ValidateSeqIdCase’: valid.c:3574:21: warning: variable ‘gcp’ set but not used [-Wunused-but-set-variable] 3574 | GatherContextPtr gcp; | ^~~ valid.c: In function ‘ValidateGenProdSet’: valid.c:6046:19: warning: variable ‘grp’ set but not used [-Wunused-but-set-variable] 6046 | GeneRefPtr grp; | ^~~ valid.c: In function ‘CountAdjacentProc’: valid.c:6730:21: warning: variable ‘gcp’ set but not used [-Wunused-but-set-variable] 6730 | GatherContextPtr gcp; | ^~~ valid.c: In function ‘CheckBioseqEndsForNAndGap’: valid.c:7040:44: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 7040 | if (str [0] == 'n' || str [0] == 'N' && begin_n != NULL) { | ^ valid.c:7061:56: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 7061 | if (str [len - 1] == 'n' || str [len - 1] == 'N' && end_n != NULL) { | ^ valid.c: In function ‘ValidateBioseqInst’: valid.c:7341:19: warning: variable ‘tech’ set but not used [-Wunused-but-set-variable] 7341 | Uint1 tech; | ^~~~ valid.c:7278:19: warning: variable ‘prot’ set but not used [-Wunused-but-set-variable] 7278 | SeqFeatPtr prot; | ^~~~ valid.c: In function ‘FixOrgModVoucher’: valid.c:13882:22: warning: unused variable ‘allowed_type’ [-Wunused-variable] 13882 | Uint1 type = 0, allowed_type = 0; | ^~~~~~~~~~~~ valid.c: In function ‘ValidateBioSource’: valid.c:15514:19: warning: variable ‘isMicrosporidia’ set but not used [-Wunused-but-set-variable] 15514 | Boolean isMicrosporidia = FALSE; | ^~~~~~~~~~~~~~~ valid.c:15512:19: warning: variable ‘isEukaryote’ set but not used [-Wunused-but-set-variable] 15512 | Boolean isEukaryote = FALSE; | ^~~~~~~~~~~ valid.c:15503:19: warning: variable ‘id’ set but not used [-Wunused-but-set-variable] 15503 | Int4 id; | ^~ valid.c: In function ‘ValidateDblink’: valid.c:16786:21: warning: variable ‘gcp’ set but not used [-Wunused-but-set-variable] 16786 | GatherContextPtr gcp; | ^~~ valid.c: In function ‘ValidateSeqDescrCommon’: valid.c:16883:19: warning: variable ‘pdp’ set but not used [-Wunused-but-set-variable] 16883 | PubdescPtr pdp; | ^~~ valid.c: In function ‘GetFeatsInGaps’: valid.c:18858:21: warning: variable ‘realBases’ set but not used [-Wunused-but-set-variable] 18858 | Int4 realBases; | ^~~~~~~~~ valid.c:18857:21: warning: variable ‘plusses’ set but not used [-Wunused-but-set-variable] 18857 | Int4 plusses; | ^~~~~~~ valid.c:18854:21: warning: variable ‘Ns’ set but not used [-Wunused-but-set-variable] 18854 | Int4 Ns; | ^~ valid.c:18851:21: warning: variable ‘dashes’ set but not used [-Wunused-but-set-variable] 18851 | Int4 dashes; | ^~~~~~ valid.c: In function ‘ValidateBioseqContextIndexed’: valid.c:20267:38: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 20267 | if (bvsp->is_mrna || cdscount == 1 && genecount < 2) { | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ valid.c:19476:65: warning: variable ‘cdsmgene’ set but not used [-Wunused-but-set-variable] 19476 | SeqFeatPtr utr5pgene, cdspgene, utr3pgene, utr5mgene, cdsmgene, utr3mgene; | ^~~~~~~~ valid.c:19476:33: warning: variable ‘cdspgene’ set but not used [-Wunused-but-set-variable] 19476 | SeqFeatPtr utr5pgene, cdspgene, utr3pgene, utr5mgene, cdsmgene, utr3mgene; | ^~~~~~~~ valid.c:19475:51: warning: variable ‘utr5minus’ set but not used [-Wunused-but-set-variable] 19475 | SeqFeatPtr utr5plus, cdsplus, utr3plus, utr5minus, cdsminus, utr3minus; | ^~~~~~~~~ valid.c:19475:41: warning: variable ‘utr3plus’ set but not used [-Wunused-but-set-variable] 19475 | SeqFeatPtr utr5plus, cdsplus, utr3plus, utr5minus, cdsminus, utr3minus; | ^~~~~~~~ valid.c:19442:41: warning: variable ‘utr3gene’ set but not used [-Wunused-but-set-variable] 19442 | SeqFeatPtr cdsgene, utr5gene, utr3gene; | ^~~~~~~~ valid.c: In function ‘ReportBadWGSGap’: valid.c:21153:18: warning: unused variable ‘is_wgs’ [-Wunused-variable] 21153 | Boolean is_wgs = FALSE; | ^~~~~~ valid.c: In function ‘ValidateBarcodeIndexNumber’: valid.c:21432:21: warning: variable ‘bin_len’ set but not used [-Wunused-but-set-variable] 21432 | Int4 bin_len; | ^~~~~~~ valid.c: In function ‘ValidateRptUnit’: valid.c:23411:32: warning: variable ‘found’ set but not used [-Wunused-but-set-variable] 23411 | Boolean badchars, found, just_nuc_letters, multi_rpt_unit, in_range; | ^~~~~ valid.c: In function ‘CheckForCommonCDSProduct’: valid.c:25628:19: warning: variable ‘is_nw’ set but not used [-Wunused-but-set-variable] 25628 | Boolean is_nw = FALSE; | ^~~~~ valid.c:25625:19: warning: variable ‘is_nc’ set but not used [-Wunused-but-set-variable] 25625 | Boolean is_nc = FALSE; | ^~~~~ valid.c: In function ‘CheckForIllegalDbxref’: valid.c:26017:16: warning: variable ‘id’ set but not used [-Wunused-but-set-variable] 26017 | Int4 id; | ^~ valid.c: In function ‘ValidateAnticodon’: valid.c:26781:53: warning: variable ‘circular’ set but not used [-Wunused-but-set-variable] 26781 | ordered = TRUE, adjacent = FALSE, circular = FALSE, exception = FALSE; | ^~~~~~~~ valid.c:26780:19: warning: variable ‘retval’ set but not used [-Wunused-but-set-variable] 26780 | Boolean retval = TRUE, tmpval, mixed_strand = FALSE, unmarked_strand = FALSE, | ^~~~~~ valid.c: In function ‘IsGeneXrefRedundant’: valid.c:28000:17: warning: variable ‘count’ set but not used [-Wunused-but-set-variable] 28000 | Int2 count; | ^~~~~ valid.c: In function ‘ValidateSeqFeat’: valid.c:28328:19: warning: unused variable ‘is_nc’ [-Wunused-variable] 28328 | Boolean is_nc = FALSE; | ^~~~~ valid.c:28308:19: warning: variable ‘count’ set but not used [-Wunused-but-set-variable] 28308 | Int2 count; | ^~~~~ valid.c:28286:19: warning: variable ‘pdp’ set but not used [-Wunused-but-set-variable] 28286 | PubdescPtr pdp; | ^~~ valid.c: In function ‘CdTransCheck’: valid.c:30490:19: warning: variable ‘grp’ set but not used [-Wunused-but-set-variable] 30490 | GeneRefPtr grp; | ^~~ valid.c: In function ‘SpliceCheckEx’: valid.c:31313:19: warning: variable ‘sep’ set but not used [-Wunused-but-set-variable] 31313 | SeqEntryPtr sep; | ^~~ valid.c: In function ‘CdsProductIdCheck’: valid.c:31689:15: warning: variable ‘grp’ set but not used [-Wunused-but-set-variable] 31689 | GeneRefPtr grp; | ^~~ valid.c: In function ‘ValidateSeqLoc’: valid.c:31754:19: warning: variable ‘retval’ set but not used [-Wunused-but-set-variable] 31754 | Boolean retval = TRUE, tmpval, mixed_strand = FALSE, unmarked_strand = FALSE, | ^~~~~~ valid.c:31753:24: warning: variable ‘prev’ set but not used [-Wunused-but-set-variable] 31753 | SeqLocPtr tmp, prev; | ^~~~ valid.c: In function ‘SortSeqGraphProc’: valid.c:32156:26: warning: self-comparison always evaluates to false [-Wtautological-compare] 32156 | } else if (gip2->right < gip2->right) { | ^ valid.c: At top level: valid.c:30138:13: warning: ‘ValidateTranslExcept’ defined but not used [-Wunused-function] 30138 | static void ValidateTranslExcept ( | ^~~~~~~~~~~~~~~~~~~~ valid.c:27650:16: warning: ‘CouldExtendPartial’ defined but not used [-Wunused-function] 27650 | static Boolean CouldExtendPartial (SeqLocPtr slp, Boolean partial5) | ^~~~~~~~~~~~~~~~~~ valid.c:20878:28: warning: ‘MultiGeneOverlapFree’ defined but not used [-Wunused-function] 20878 | static MultiGeneOverlapPtr MultiGeneOverlapFree (MultiGeneOverlapPtr m) | ^~~~~~~~~~~~~~~~~~~~ valid.c:20828:19: warning: ‘ListFeaturesContainedInLocation’ defined but not used [-Wunused-function] 20828 | static ValNodePtr ListFeaturesContainedInLocation (BioseqPtr bsp, SeqLocPtr slp, Uint1 seqfeatChoice, Uint1 featdefChoice) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ valid.c:17541:16: warning: ‘IsEMBLAccn’ defined but not used [-Wunused-function] 17541 | static Boolean IsEMBLAccn (SeqEntryPtr sep, SeqLocPtr location) | ^~~~~~~~~~ valid.c:14642:16: warning: ‘CountryIsClosestToLatLon’ defined but not used [-Wunused-function] 14642 | static Boolean CountryIsClosestToLatLon ( | ^~~~~~~~~~~~~~~~~~~~~~~~ valid.c:14545:16: warning: ‘LatLonInRange’ defined but not used [-Wunused-function] 14545 | static Boolean LatLonInRange ( | ^~~~~~~~~~~~~ valid.c:13478:16: warning: ‘LatLonIsValid’ defined but not used [-Wunused-function] 13478 | static Boolean LatLonIsValid (CharPtr name) | ^~~~~~~~~~~~~ valid.c:10462:16: warning: ‘ConsistentWithC’ defined but not used [-Wunused-function] 10462 | static Boolean ConsistentWithC (Char ch) | ^~~~~~~~~~~~~~~ valid.c:6952:13: warning: ‘ReportLongSeqId’ defined but not used [-Wunused-function] 6952 | static void ReportLongSeqId (SeqIdPtr sip, ValidStructPtr vsp, Int4 max_len) | ^~~~~~~~~~~~~~~ valid.c:5932:13: warning: ‘CheckMutSetSources’ defined but not used [-Wunused-function] 5932 | static void CheckMutSetSources (BioSourcePtr biop, Pointer userdata) | ^~~~~~~~~~~~~~~~~~ valid.c:4360:13: warning: ‘FindLongIdsThatCollideWhenTruncated’ defined but not used [-Wunused-function] 4360 | static void FindLongIdsThatCollideWhenTruncated (SeqEntryPtr sep, ValidStructPtr vsp, Int4 trunc_len) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ valid.c:1511:16: warning: ‘IsNotUnclassifiedExcept’ defined but not used [-Wunused-function] 1511 | static Boolean IsNotUnclassifiedExcept (ValidStructPtr vsp) | ^~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF valapi.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from valapi.c:50: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ valapi.c: In function ‘DoesStringMatchExpression’: valapi.c:263:15: warning: variable ‘errstr’ set but not used [-Wunused-but-set-variable] 263 | const char *errstr; | ^~~~~~ valapi.c: In function ‘DoesFieldValueMatchExpression’: valapi.c:292:21: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘Nlm_Int8’ {aka ‘long long int’} [-Wformat=] 292 | sprintf (buf, "%d", ufp->data.intvalue); | ~^ ~~~~~~~~~~~~~~~~~~ | | | | int Nlm_Int8 {aka long long int} | %lld arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF alignmgr.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/alignmgr.h:261, from alignmgr.c:584: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ alignmgr.c: In function ‘AlnMgrIndexParentSA’: alignmgr.c:1607:19: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 1607 | sap->saip = (Pointer)AMAlignIndexFree(amaip); | ^ alignmgr.c: In function ‘AlnMgrGetNthBlockRange’: alignmgr.c:4182:21: warning: variable ‘amaip’ set but not used [-Wunused-but-set-variable] 4182 | AMAlignIndexPtr amaip; | ^~~~~ alignmgr.c: In function ‘AlnMgrMakeFakeMultipleEx’: alignmgr.c:5157:21: warning: variable ‘nogap’ set but not used [-Wunused-but-set-variable] 5157 | Boolean nogap; | ^~~~~ alignmgr.c: In function ‘AlnMgrMapBioseqToBioseq’: alignmgr.c:10840:19: warning: variable ‘gap’ set but not used [-Wunused-but-set-variable] 10840 | Uint1 gap; | ^~~ In file included from ../include/samutil.h:234, from ../include/alignmgr.h:266: ../include/objalignloc.h: At top level: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ alignmgr.c:10572:16: warning: ‘am_merge_after_edit’ defined but not used [-Wunused-function] 10572 | static Boolean am_merge_after_edit (SeqAlignPtr sap) | ^~~~~~~~~~~~~~~~~~~ alignmgr.c:6650:16: warning: ‘AlnMgrJaggedIndex’ defined but not used [-Wunused-function] 6650 | static Boolean AlnMgrJaggedIndex(SeqAlignPtr sap, AMmsmsPtr ams_head, AMmsmsPtr *ams_mhead, Int4 numrows) | ^~~~~~~~~~~~~~~~~ alignmgr.c:6123:18: warning: ‘AlnMgrConstructOverlaps’ defined but not used [-Wunused-function] 6123 | static AMmsmsPtr AlnMgrConstructOverlaps(AMmsmsPtr ams_head) | ^~~~~~~~~~~~~~~~~~~~~~~ alignmgr.c:5405:13: warning: ‘AlnMgrMergeNeighbors’ defined but not used [-Wunused-function] 5405 | static void AlnMgrMergeNeighbors(SeqAlignPtr salp) | ^~~~~~~~~~~~~~~~~~~~ alignmgr.c: In function ‘AlnMgrUnpackSeqAlign’: alignmgr.c:1149:33: warning: ‘sap_segs_prev’ may be used uninitialized [-Wmaybe-uninitialized] 1149 | sap_segs_prev->next = (SeqAlignPtr)(sap_segs->segs); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ alignmgr.c:1117:17: note: ‘sap_segs_prev’ was declared here 1117 | SeqAlignPtr sap_segs_prev; | ^~~~~~~~~~~~~ alignmgr.c: In function ‘am_print_seqalign_indexes’: alignmgr.c:2436:27: warning: ‘amaip’ may be used uninitialized [-Wmaybe-uninitialized] 2436 | for (i=0; inumbsqs; i++) | ~~~~~^~~~~~~~~ alignmgr.c:2389:21: note: ‘amaip’ was declared here 2389 | AMAlignIndexPtr amaip; | ^~~~~ alignmgr.c:2409:31: warning: ‘saip’ may be used uninitialized [-Wmaybe-uninitialized] 2409 | printf("%d ", saip->aligncoords[i]); | ~~~~^~~~~~~~~~~~~ alignmgr.c:2393:21: note: ‘saip’ was declared here 2393 | SAIndexPtr saip; | ^~~~ alignmgr.c: In function ‘AlnMgrGetNthSeqRangeInSA’: alignmgr.c:4113:20: warning: ‘tmp_beg’ may be used uninitialized [-Wmaybe-uninitialized] 4113 | *start = tmp_beg; | ~~~~~~~^~~~~~~~~ alignmgr.c:3974:21: note: ‘tmp_beg’ was declared here 3974 | Int4 tmp_beg; | ^~~~~~~ alignmgr.c:4115:19: warning: ‘tmp_end’ may be used uninitialized [-Wmaybe-uninitialized] 4115 | *stop = tmp_end; | ~~~~~~^~~~~~~~~ alignmgr.c:3975:21: note: ‘tmp_end’ was declared here 3975 | Int4 tmp_end; | ^~~~~~~ alignmgr.c: In function ‘AlnMgrGetSubAlign’: alignmgr.c:9097:17: warning: ‘salp’ may be used uninitialized [-Wmaybe-uninitialized] 9097 | salp = am_cleanupsalp(salp); | ^~~~~~~~~~~~~~~~~~~~ alignmgr.c:8885:21: note: ‘salp’ was declared here 8885 | SeqAlignPtr salp; | ^~~~ In function ‘am_find_master’, inlined from ‘AlnMgrMakeMultByIntersectOnMaster’ at alignmgr.c:5588:17: alignmgr.c:5865:15: warning: ‘sip_head’ may be used uninitialized [-Wmaybe-uninitialized] 5865 | while (sip && !done) | ~~~~^~~~~~~~ alignmgr.c: In function ‘AlnMgrMakeMultByIntersectOnMaster’: alignmgr.c:5845:18: note: ‘sip_head’ was declared here 5845 | SeqIdPtr sip_head; | ^~~~~~~~ In function ‘am_find_master’, inlined from ‘AlnMgrMakeMultByIntersectOnMaster’ at alignmgr.c:5588:17: alignmgr.c:5881:33: warning: ‘sip_tmp’ may be used uninitialized [-Wmaybe-uninitialized] 5881 | while (sip_tmp != NULL && !here) | ~~~~~~~~~~~~~~~~^~~~~~~~ alignmgr.c: In function ‘AlnMgrMakeMultByIntersectOnMaster’: alignmgr.c:5846:18: note: ‘sip_tmp’ was declared here 5846 | SeqIdPtr sip_tmp; | ^~~~~~~ alignmgr.c:5589:7: warning: ‘sip_tmp’ may be used uninitialized [-Wmaybe-uninitialized] 5589 | if (sip_tmp == NULL) | ^ alignmgr.c:5553:17: note: ‘sip_tmp’ was declared here 5553 | SeqIdPtr sip_tmp; | ^~~~~~~ alignmgr.c: In function ‘am_is_consistent’: alignmgr.c:10114:13: warning: ‘n’ may be used uninitialized [-Wmaybe-uninitialized] 10114 | AlnMgrGetNthUnalignedForNthRow(sap, n, i, &u_start, &u_stop); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ alignmgr.c:10009:21: note: ‘n’ was declared here 10009 | Int4 n; | ^ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF aliparse.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/aliparse.h:12, from aliparse.c:9: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ aliparse.c: In function ‘s_IsInterleaved’: aliparse.c:929:51: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 929 | (s_configInfo.useMaybes == FALSE) && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 930 | (seqLinePtr->maybe == FALSE)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ aliparse.c:823:20: warning: variable ‘isMaybe’ set but not used [-Wunused-but-set-variable] 823 | Boolean isMaybe; | ^~~~~~~ aliparse.c: In function ‘s_ProcessInterId’: aliparse.c:1000:15: warning: variable ‘errPtr’ set but not used [-Wunused-but-set-variable] 1000 | ErrInfoPtr errPtr; | ^~~~~~ aliparse.c: In function ‘s_ProcessInterSeq’: aliparse.c:1090:15: warning: variable ‘errPtr’ set but not used [-Wunused-but-set-variable] 1090 | ErrInfoPtr errPtr = NULL; | ^~~~~~ aliparse.c: In function ‘s_AnalyzeInterleaved’: aliparse.c:1193:43: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 1193 | (seqLinePtr->maybe == TRUE) && (s_configInfo.useMaybes == TRUE)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ aliparse.c: In function ‘s_ProcessContigId’: aliparse.c:1385:18: warning: variable ‘errPtr’ set but not used [-Wunused-but-set-variable] 1385 | ErrInfoPtr errPtr; | ^~~~~~ aliparse.c: In function ‘s_ProcessContigSeq’: aliparse.c:1476:18: warning: variable ‘errPtr’ set but not used [-Wunused-but-set-variable] 1476 | ErrInfoPtr errPtr; | ^~~~~~ aliparse.c: In function ‘s_AnalyzeContiguous’: aliparse.c:1603:43: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 1603 | (seqLinePtr->maybe == TRUE) && (s_configInfo.useMaybes == TRUE)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ aliparse.c: In function ‘s_CheckContext’: aliparse.c:2150:47: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 2150 | (seqLinePtr->maybe == TRUE) && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 2151 | (s_configInfo.useMaybes == TRUE)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ aliparse.c:2131:20: warning: variable ‘errPtr’ set but not used [-Wunused-but-set-variable] 2131 | ErrInfoPtr errPtr; | ^~~~~~ aliparse.c: In function ‘PrintOutMultAlign’: aliparse.c:3161:10: warning: statement with no effect [-Wunused-value] 3161 | for (d; dnext = newSeqPart; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ aliparse.c:633:18: note: ‘lastSeqPart’ was declared here 633 | SeqPartPtr lastSeqPart; | ^~~~~~~~~~~ aliparse.c:641:10: warning: ‘newIdStr’ may be used uninitialized [-Wmaybe-uninitialized] 641 | if (idStr != NULL) | ^ aliparse.c:543:20: note: ‘newIdStr’ was declared here 543 | CharPtr newIdStr; | ^~~~~~~~ aliparse.c:669:39: warning: ‘currentIdStr’ may be used uninitialized [-Wmaybe-uninitialized] 669 | currentId->id = currentIdStr; | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ aliparse.c:631:18: note: ‘currentIdStr’ was declared here 631 | CharPtr currentIdStr; | ^~~~~~~~~~~~ In function ‘s_CheckContext’, inlined from ‘Ali_Read’ at aliparse.c:2565:7: aliparse.c:2294:25: warning: ‘newIdStr’ may be used uninitialized [-Wmaybe-uninitialized] 2294 | if ((lastRow != NULL) && | ~~~~~~~~~~~~~~~~~~^~ 2295 | ((idStr = s_GetRowIdString (lastRow)) != NULL) && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ aliparse.c: In function ‘Ali_Read’: aliparse.c:543:20: note: ‘newIdStr’ was declared here 543 | CharPtr newIdStr; | ^~~~~~~~ In function ‘s_DisplayRowList’, inlined from ‘Ali_Read’ at aliparse.c:2568:3: aliparse.c:760:17: warning: ‘cLineType’ may be used uninitialized [-Wmaybe-uninitialized] 760 | fprintf(stderr,"%04d: MAYBE SEQUENCE[%c] : %s\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 | seqLinePtr->rowNum, | ~~~~~~~~~~~~~~~~~~~ 762 | cLineType, | ~~~~~~~~~~ 763 | seqLinePtr->sequence); | ~~~~~~~~~~~~~~~~~~~~~ aliparse.c: In function ‘Ali_Read’: aliparse.c:723:20: note: ‘cLineType’ was declared here 723 | Char cLineType; | ^~~~~~~~~ In function ‘s_IsInterleaved’, inlined from ‘s_AnalyzeContents’ at aliparse.c:2004:7, inlined from ‘Ali_Read’ at aliparse.c:2572:3: aliparse.c:927:25: warning: ‘seqLinePtr’ may be used uninitialized [-Wmaybe-uninitialized] 927 | if (seqLinePtr->sequence != NULL) | ~~~~~~~~~~^~~~~~~~~~ aliparse.c: In function ‘Ali_Read’: aliparse.c:820:20: note: ‘seqLinePtr’ was declared here 820 | SeqLineInfoPtr seqLinePtr; | ^~~~~~~~~~ In function ‘s_AnalyzeInterleaved’, inlined from ‘s_AnalyzeContents’ at aliparse.c:2007:16, inlined from ‘Ali_Read’ at aliparse.c:2572:3: aliparse.c:1352:50: warning: ‘previousLength’ may be used uninitialized [-Wmaybe-uninitialized] 1352 | if ((s_configInfo.declaredInfo.seqLength != 0) && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 1353 | (s_configInfo.declaredInfo.seqLength != previousLength)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ aliparse.c: In function ‘Ali_Read’: aliparse.c:1154:20: note: ‘previousLength’ was declared here 1154 | Int4 previousLength; | ^~~~~~~~~~~~~~ aliparse.c: In function ‘ALI_ConvertToNCBIData’: aliparse.c:3276:4: warning: ‘sep_new’ may be used uninitialized [-Wmaybe-uninitialized] 3276 | SeqAlignAddInSeqEntry (sep_head, sanp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ aliparse.c:2974:18: note: ‘sep_new’ was declared here 2974 | SeqEntryPtr sep_new; | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF aliread.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from aliread.c:3: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from ../include/samutil.h:234, from ../include/alignmgr.h:266, from ../include/aliparse.h:15, from aliread.c:6: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF alignval.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from alignval.c:46: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ alignval.c: In function ‘ValidateSeqlengthInDenseSeg’: alignval.c:1267:17: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 1267 | if(stptrtemp[j+i*aligndim]+lenptrtemp[i]>bslen) | ^ alignval.c: In function ‘PercentStringMatch’: alignval.c:1579:32: warning: variable ‘max_len’ set but not used [-Wunused-but-set-variable] 1579 | Int4 len1, len2, min_len, k, max_len; | ^~~~~~~ alignval.c: In function ‘CheckAlnSeqLens’: alignval.c:2004:12: warning: variable ‘aln_len’ set but not used [-Wunused-but-set-variable] 2004 | Int4 aln_len, start, stop; | ^~~~~~~ alignval.c: In function ‘ValidateSeqAlign’: alignval.c:2125:16: warning: variable ‘ans’ set but not used [-Wunused-but-set-variable] 2125 | MsgAnswer ans; | ^~~ alignval.c: In function ‘GetAlignmentColumnPercentIdentities’: alignval.c:2511:14: warning: variable ‘num_match’ set but not used [-Wunused-but-set-variable] 2511 | Int4 num_match; | ^~~~~~~~~ In file included from ../include/samutil.h:234, from ../include/alignmgr2.h:114, from alignval.c:57: ../include/objalignloc.h: At top level: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ alignval.c:2002:13: warning: ‘CheckAlnSeqLens’ defined but not used [-Wunused-function] 2002 | static void CheckAlnSeqLens (SeqAlignPtr salp) | ^~~~~~~~~~~~~~~ alignval.c:1560:16: warning: ‘IsSipContainedInStdseg’ defined but not used [-Wunused-function] 1560 | static Boolean IsSipContainedInStdseg(SeqIdPtr sip, StdSegPtr ssp) | ^~~~~~~~~~~~~~~~~~~~~~ alignval.c:602:13: warning: ‘delete_bioseqs’ defined but not used [-Wunused-function] 602 | static void delete_bioseqs (ValNodePtr ids, Uint2 entityID) | ^~~~~~~~~~~~~~ alignval.c: In function ‘ValMessage’: alignval.c:465:92: warning: ‘, the alignment claims to co...’ directive writing 195 bytes into a region of size between 155 and 493 [-Wformat-overflow=] 465 | sprintf(string2, "In sequence %s, segment %ld (near sequence position %ld) context %s, the alignment claims to contain residue coordinates that are past the end of the sequence. Either the sequence is too short, or there are extra characters or formatting errors in the alignment", buf, (long) Intvalue, (long) pos, buf3); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from ../include/ncbilcl.h:154: In function ‘sprintf’, inlined from ‘ValMessage’ at alignval.c:465:7: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 255 and 593 bytes into a destination of size 552 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ alignval.c: In function ‘ValMessage’: alignval.c:448:92: warning: ‘, the alignment claims to co...’ directive writing 195 bytes into a region of size between 155 and 493 [-Wformat-overflow=] 448 | sprintf(string2, "In sequence %s, segment %ld (near sequence position %ld) context %s, the alignment claims to contain residue coordinates that are past the end of the sequence. Either the sequence is too short, or there are extra characters or formatting errors in the alignment", buf, (long) Intvalue, (long) pos, buf3); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘sprintf’, inlined from ‘ValMessage’ at alignval.c:448:7: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 255 and 593 bytes into a destination of size 552 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF sqnutil1.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/sqnutils.h:48, from sqnutil1.c:45: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ sqnutil1.c: In function ‘GeneExtendFunc’: sqnutil1.c:2012:18: warning: variable ‘grp’ set but not used [-Wunused-but-set-variable] 2012 | GeneRefPtr grp; | ^~~ sqnutil1.c: In function ‘ParseAnticodon’: sqnutil1.c:3494:14: warning: variable ‘strand’ set but not used [-Wunused-but-set-variable] 3494 | Uint1 strand; | ^~~~~~ sqnutil1.c: In function ‘ParseCodeBreak’: sqnutil1.c:3617:17: warning: variable ‘strand’ set but not used [-Wunused-but-set-variable] 3617 | Uint1 strand; | ^~~~~~ sqnutil1.c: In function ‘CleanUpPubdescAuthors’: sqnutil1.c:9093:20: warning: variable ‘prev’ set but not used [-Wunused-but-set-variable] 9093 | ValNodePtr PNTR prev; | ^~~~ sqnutil1.c: In function ‘FixWrongFuzzOnPlusStrand’: sqnutil1.c:11948:15: warning: unused variable ‘spp’ [-Wunused-variable] 11948 | SeqPntPtr spp; | ^~~ sqnutil1.c: In function ‘FixWrongFuzzOnMinusStrand’: sqnutil1.c:12007:15: warning: unused variable ‘spp’ [-Wunused-variable] 12007 | SeqPntPtr spp; | ^~~ sqnutil1.c: In function ‘ConsolidateBioSourceNotes’: sqnutil1.c:13250:21: warning: variable ‘note_mod’ set but not used [-Wunused-but-set-variable] 13250 | OrgModPtr mod, note_mod; | ^~~~~~~~ sqnutil1.c:13249:21: warning: variable ‘note_ssp’ set but not used [-Wunused-but-set-variable] 13249 | SubSourcePtr ssp, note_ssp; | ^~~~~~~~ sqnutil1.c: In function ‘RemoveUnnecessaryGeneXrefs’: sqnutil1.c:15059:24: warning: variable ‘count’ set but not used [-Wunused-but-set-variable] 15059 | Int2 count; | ^~~~~ sqnutil1.c: In function ‘LinkTwoFeatures’: sqnutil1.c:17930:25: warning: variable ‘prev_xref’ set but not used [-Wunused-but-set-variable] 17930 | SeqFeatXrefPtr xref, prev_xref, next_xref; | ^~~~~~~~~ In file included from ../include/samutil.h:234, from ../include/alignmgr2.h:114, from sqnutil1.c:63: ../include/objalignloc.h: At top level: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ sqnutil1.c:10386:16: warning: ‘CleanUpSgml’ defined but not used [-Wunused-function] 10386 | static CharPtr CleanUpSgml ( | ^~~~~~~~~~~ sqnutil1.c:10272:13: warning: ‘SortGoTermsSfp’ defined but not used [-Wunused-function] 10272 | static void SortGoTermsSfp ( | ^~~~~~~~~~~~~~ sqnutil1.c:7405:16: warning: ‘IsStringSingleToken’ defined but not used [-Wunused-function] 7405 | static Boolean IsStringSingleToken (CharPtr str) | ^~~~~~~~~~~~~~~~~~~ sqnutil1.c:4942:13: warning: ‘CleanupConsSplice’ defined but not used [-Wunused-function] 4942 | static void CleanupConsSplice (GBQualPtr gbq) | ^~~~~~~~~~~~~~~~~ sqnutil1.c:2007:16: warning: ‘GeneExtendFunc’ defined but not used [-Wunused-function] 2007 | static Boolean GeneExtendFunc (GatherContextPtr gcp) | ^~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF sqnutil2.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/sqnutils.h:48, from sqnutil2.c:45: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ sqnutil2.c: In function ‘FindResidueByName’: sqnutil2.c:5223:11: warning: variable ‘last’ set but not used [-Wunused-but-set-variable] 5223 | Uint1 last; | ^~~~ sqnutil2.c: In function ‘ReadFeatureTableEx’: sqnutil2.c:7254:18: warning: variable ‘isnote’ set but not used [-Wunused-but-set-variable] 7254 | Boolean isnote; | ^~~~~~ sqnutil2.c:7246:18: warning: variable ‘endsinspace’ set but not used [-Wunused-but-set-variable] 7246 | Boolean endsinspace; | ^~~~~~~~~~~ sqnutil2.c: In function ‘SeqEntryCopyReplace’: sqnutil2.c:9270:15: warning: variable ‘type’ set but not used [-Wunused-but-set-variable] 9270 | Uint1 type = 0; | ^~~~ sqnutil2.c: In function ‘StreamingReadBioseq’: sqnutil2.c:10095:10: warning: variable ‘level’ set but not used [-Wunused-but-set-variable] 10095 | Int2 level; | ^~~~~ sqnutil2.c: In function ‘StreamAsnForDescriptors’: sqnutil2.c:10328:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 10328 | while (rval = StreamingReadSeqEntry (aip, sp, &sr)) { | ^~~~ sqnutil2.c: In function ‘WriteAsnWithReplacedDescriptors’: sqnutil2.c:10749:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 10749 | while (rval = StreamingReadWriteSeqEntry(desc_stream_list, aip_in, aip_out, sp)) { | ^~~~ sqnutil2.c: In function ‘ReadFeatureTableFile’: sqnutil2.c:11700:18: warning: variable ‘begin’ set but not used [-Wunused-but-set-variable] 11700 | Int4 begin; | ^~~~~ sqnutil2.c: In function ‘ReadFastaOnly’: sqnutil2.c:11894:18: warning: variable ‘seqid’ set but not used [-Wunused-but-set-variable] 11894 | Char seqid [2048]; | ^~~~~ sqnutil2.c: In function ‘ReadDeltaFastaWithEmptyDefline’: sqnutil2.c:12446:29: warning: variable ‘seqid’ set but not used [-Wunused-but-set-variable] 12446 | Char line [4096], seqid [2048]; | ^~~~~ sqnutil2.c: In function ‘SortSeqGraphProc’: sqnutil2.c:13002:26: warning: self-comparison always evaluates to false [-Wtautological-compare] 13002 | } else if (gip2->right < gip2->right) { | ^ sqnutil2.c: In function ‘PrintQualityScoresToBuffer’: sqnutil2.c:13052:17: warning: variable ‘entityID’ set but not used [-Wunused-but-set-variable] 13052 | Uint2 entityID; | ^~~~~~~~ sqnutil2.c: In function ‘GetScoresbySeqId’: sqnutil2.c:13461:17: warning: variable ‘entityID’ set but not used [-Wunused-but-set-variable] 13461 | Uint2 entityID; | ^~~~~~~~ sqnutil2.c: In function ‘RemoveGapsFromDeltaLocation’: sqnutil2.c:15480:15: warning: variable ‘strand’ set but not used [-Wunused-but-set-variable] 15480 | Uint1 strand; | ^~~~~~ sqnutil2.c: In function ‘IsStringInSpanInList’: sqnutil2.c:16693:11: warning: variable ‘str_val’ set but not used [-Wunused-but-set-variable] 16693 | Int4 str_val; | ^~~~~~~ sqnutil2.c:16691:27: warning: variable ‘suffix_len’ set but not used [-Wunused-but-set-variable] 16691 | Int4 prefix_len = 0, suffix_len; | ^~~~~~~~~~ sqnutil2.c: In function ‘CreateStructuredCommentsFromFile’: sqnutil2.c:18415:35: warning: variable ‘vnp_h’ set but not used [-Wunused-but-set-variable] 18415 | ValNodePtr table, header, line, vnp_h, vnp_l, tmp; | ^~~~~ sqnutil2.c: In function ‘AlignmentIntervalToString’: sqnutil2.c:18779:14: warning: variable ‘target_strand’ set but not used [-Wunused-but-set-variable] 18779 | Uint1 target_strand; | ^~~~~~~~~~~~~ sqnutil2.c:18778:14: warning: variable ‘seq_len’ set but not used [-Wunused-but-set-variable] 18778 | Int4 seq_len; | ^~~~~~~ sqnutil2.c: In function ‘AdjustForConsensusSpliceCallback’: sqnutil2.c:20313:33: warning: variable ‘partial5_last’ set but not used [-Wunused-but-set-variable] 20313 | Boolean partial5, partial3, partial5_last, partial3_last, first = TRUE; | ^~~~~~~~~~~~~ sqnutil2.c: In function ‘RemoveGIProc’: sqnutil2.c:20926:18: warning: variable ‘nextid’ set but not used [-Wunused-but-set-variable] 20926 | SeqIdPtr nextid, sip; | ^~~~~~ sqnutil2.c: In function ‘RemoveBadCodonRecognizedCallback’: sqnutil2.c:22812:13: warning: variable ‘rcodon’ set but not used [-Wunused-but-set-variable] 22812 | Uint1 rcodon [4]; | ^~~~~~ sqnutil2.c: In function ‘CompareStructuredComment’: sqnutil2.c:25151:23: warning: variable ‘ovp2’ set but not used [-Wunused-but-set-variable] 25151 | ObjValNodePtr ovp1, ovp2; | ^~~~ sqnutil2.c:25151:17: warning: variable ‘ovp1’ set but not used [-Wunused-but-set-variable] 25151 | ObjValNodePtr ovp1, ovp2; | ^~~~ sqnutil2.c: In function ‘UniqueAndCountValNodeCS’: sqnutil2.c:25546:17: warning: variable ‘curr’ set but not used [-Wunused-but-set-variable] 25546 | ValNodePtr curr; | ^~~~ sqnutil2.c: In function ‘PerformArticleQuery’: sqnutil2.c:25810:20: warning: variable ‘debug_mode’ set but not used [-Wunused-but-set-variable] 25810 | Boolean debug_mode = FALSE; | ^~~~~~~~~~ In file included from ../include/samutil.h:234, from ../include/alignmgr2.h:114, from sqnutil2.c:58: ../include/objalignloc.h: At top level: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ sqnutil2.c:18065:19: warning: ‘AuthAffilListFree’ defined but not used [-Wunused-function] 18065 | static ValNodePtr AuthAffilListFree (ValNodePtr list) | ^~~~~~~~~~~~~~~~~ sqnutil2.c:18044:21: warning: ‘AuthAffilNew’ defined but not used [-Wunused-function] 18044 | static AuthAffilPtr AuthAffilNew (CharPtr affil) | ^~~~~~~~~~~~ sqnutil2.c:16282:19: warning: ‘MakeTranscriptomeIDTokensFromLine’ defined but not used [-Wunused-function] 16282 | static ValNodePtr MakeTranscriptomeIDTokensFromLine (CharPtr line) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sqnutil2.c:16188:13: warning: ‘RevCompFeatsOnBioseq’ defined but not used [-Wunused-function] 16188 | static void RevCompFeatsOnBioseq (BioseqPtr bsp) | ^~~~~~~~~~~~~~~~~~~~ sqnutil2.c:8333:16: warning: ‘DoesSeqEntryAccessionMatchList’ defined but not used [-Wunused-function] 8333 | static Boolean DoesSeqEntryAccessionMatchList (SeqEntryPtr sep, ValNodePtr accn_list) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sqnutil2.c:4684:16: warning: ‘IsNonSeqChar’ defined but not used [-Wunused-function] 4684 | static Boolean IsNonSeqChar (Char ch, Boolean is_prot) | ^~~~~~~~~~~~ sqnutil2.c: In function ‘ReplaceLocalID’: sqnutil2.c:23605:22: warning: ‘%d’ directive writing between 1 and 6 bytes into a region of size between 5 and 68 [-Wformat-overflow=] 23605 | sprintf (tmp, "%s__%d", str, (int) count); | ^~ sqnutil2.c:23605:17: note: directive argument in the range [-32768, 32767] 23605 | sprintf (tmp, "%s__%d", str, (int) count); | ^~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from ../include/ncbilcl.h:154: In function ‘sprintf’, inlined from ‘ReplaceLocalID’ at sqnutil2.c:23605:3: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 4 and 72 bytes into a destination of size 70 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In function ‘AdjustForConsensusSpliceCallback’, inlined from ‘AdjustSeqEntryForConsensusSpliceBioseqCallback’ at sqnutil2.c:20547:5: sqnutil2.c:20384:29: warning: ‘partial3_last’ may be used uninitialized [-Wmaybe-uninitialized] 20384 | if (!first && !partial5 && !partial3_last | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ sqnutil2.c: In function ‘AdjustSeqEntryForConsensusSpliceBioseqCallback’: sqnutil2.c:20313:48: note: ‘partial3_last’ was declared here 20313 | Boolean partial5, partial3, partial5_last, partial3_last, first = TRUE; | ^~~~~~~~~~~~~ sqnutil2.c: In function ‘PrintQualityScoresToBuffer’: sqnutil2.c:13110:54: warning: ‘%ld’ directive writing between 1 and 11 bytes into a region of size between 5 and 56 [-Wformat-overflow=] 13110 | sprintf (buf, ">%s %s (Length: %ld, Min: %ld, Max: %ld)\n", id, title, | ^~~ sqnutil2.c:13110:17: note: directive argument in the range [-2147483647, 2147483647] 13110 | sprintf (buf, ">%s %s (Length: %ld, Min: %ld, Max: %ld)\n", id, title, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘sprintf’, inlined from ‘PrintQualityScoresToBuffer’ at sqnutil2.c:13110:3: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output 32 or more bytes (assuming 93) into a destination of size 84 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF sqnutil3.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/sqnutils.h:48, from sqnutil3.c:45: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ sqnutil3.c: In function ‘BspLinkCDSmRNAbyOverlap’: sqnutil3.c:528:22: warning: variable ‘count’ set but not used [-Wunused-but-set-variable] 528 | Int2 count; | ^~~~~ sqnutil3.c: In function ‘CautiousSeqEntryCleanup’: sqnutil3.c:2178:16: warning: variable ‘taxserver’ set but not used [-Wunused-but-set-variable] 2178 | Boolean taxserver; | ^~~~~~~~~ sqnutil3.c: In function ‘AddGapSeqLit’: sqnutil3.c:3127:19: warning: unused variable ‘gap_chars’ [-Wunused-variable] 3127 | CharPtr gap_chars = "NNNNNNNNNN" | ^~~~~~~~~ sqnutil3.c: In function ‘ConvertSegSetsToDeltaSequencesInt’: sqnutil3.c:3382:26: warning: variable ‘prev_sep’ set but not used [-Wunused-but-set-variable] 3382 | SeqEntryPtr sub_sep, prev_sep, next_sep; | ^~~~~~~~ sqnutil3.c: In function ‘MakeSequinDataFromAlignmentEx’: sqnutil3.c:4797:32: warning: variable ‘num_sets’ set but not used [-Wunused-but-set-variable] 4797 | Int4 index, curr_seg, num_sets; | ^~~~~~~~ sqnutil3.c:4791:26: warning: variable ‘salp_last’ set but not used [-Wunused-but-set-variable] 4791 | SeqAlignPtr salp_list, salp_last; | ^~~~~~~~~ sqnutil3.c:4791:15: warning: variable ‘salp_list’ set but not used [-Wunused-but-set-variable] 4791 | SeqAlignPtr salp_list, salp_last; | ^~~~~~~~~ sqnutil3.c: In function ‘ConvertContainedCDSToMiscFeat’: sqnutil3.c:12824:14: warning: variable ‘strand’ set but not used [-Wunused-but-set-variable] 12824 | Uint1 strand; | ^~~~~~ sqnutil3.c: In function ‘OrgNameMatchExceptOldName’: sqnutil3.c:13713:28: warning: self-comparison always evaluates to false [-Wtautological-compare] 13713 | || onp2->mgcode != onp2->mgcode | ^~ sqnutil3.c: In function ‘FindMismatchedCitSubAffiliations’: sqnutil3.c:19281:14: warning: variable ‘has_seq_submit’ set but not used [-Wunused-but-set-variable] 19281 | Boolean has_seq_submit = TRUE; | ^~~~~~~~~~~~~~ sqnutil3.c: In function ‘GetCDSformRNA’: sqnutil3.c:20267:8: warning: variable ‘count’ set but not used [-Wunused-but-set-variable] 20267 | Int2 count; | ^~~~~ sqnutil3.c: In function ‘FindTextInFlatfileOncaller’: sqnutil3.c:22140:19: warning: variable ‘okay’ set but not used [-Wunused-but-set-variable] 22140 | Boolean okay; | ^~~~ sqnutil3.c: In function ‘CheckForTitleAuthorConflicts’: sqnutil3.c:23168:14: warning: variable ‘author_conflict’ set but not used [-Wunused-but-set-variable] 23168 | Boolean author_conflict = FALSE; | ^~~~~~~~~~~~~~~ sqnutil3.c: In function ‘SortVnpByBspProjectId’: sqnutil3.c:26956:31: warning: the comparison will always evaluate as ‘true’ for the address of ‘vnp2’ will never be NULL [-Waddress] 26956 | if (vnp1 != NULL &&& vnp2 != NULL) { | ^~ sqnutil3.c:26948:15: note: ‘vnp2’ declared here 26948 | ValNodePtr vnp2; | ^~~~ sqnutil3.c: In function ‘GetDiscrepancyItemTextEx’: sqnutil3.c:31033:21: warning: variable ‘special_flag’ set but not used [-Wunused-but-set-variable] 31033 | Boolean special_flag = FALSE; | ^~~~~~~~~~~~ sqnutil3.c: In function ‘CollectionDateIsInTheFuture’: sqnutil3.c:34586:20: warning: variable ‘time’ set but not used [-Wunused-but-set-variable] 34586 | CharPtr str, time; | ^~~~ In file included from ../include/samutil.h:234, from ../include/alignmgr2.h:114, from sqnutil3.c:62: ../include/objalignloc.h: At top level: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ sqnutil3.c: In function ‘FillInMissingTraces’: sqnutil3.c:35189:5: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 35189 | system (cmmd); | ^~~~~~~~~~~~~ sqnutil3.c: At top level: sqnutil3.c:36777:13: warning: ‘TestLatLonFormatting’ defined but not used [-Wunused-function] 36777 | static void TestLatLonFormatting (FILE *fp) | ^~~~~~~~~~~~~~~~~~~~ sqnutil3.c:34406:22: warning: ‘BetterDateFree’ defined but not used [-Wunused-function] 34406 | static BetterDatePtr BetterDateFree (BetterDatePtr dp) | ^~~~~~~~~~~~~~ sqnutil3.c:33998:16: warning: ‘GetColon’ defined but not used [-Wunused-function] 33998 | static CharPtr GetColon (CharPtr str) | ^~~~~~~~ sqnutil3.c:17224:24: warning: ‘IntervalPairFree’ defined but not used [-Wunused-function] 17224 | static IntervalPairPtr IntervalPairFree (IntervalPairPtr i) | ^~~~~~~~~~~~~~~~ sqnutil3.c:10883:16: warning: ‘IsMitochondrionBioseq’ defined but not used [-Wunused-function] 10883 | static Boolean IsMitochondrionBioseq(BioseqPtr bsp) | ^~~~~~~~~~~~~~~~~~~~~ sqnutil3.c: In function ‘tRNASameStrandBioseqCallback’: sqnutil3.c:16757:19: warning: ‘strand’ may be used uninitialized [-Wmaybe-uninitialized] 16757 | if ((strand == Seq_strand_minus && this_strand != Seq_strand_minus) sqnutil3.c:16728:22: note: ‘strand’ was declared here 16728 | Uint1 strand, this_strand; | ^~~~~~ sqnutil3.c: In function ‘CheckForDivConflicts’: sqnutil3.c:8137:21: warning: ‘sdp’ may be used uninitialized [-Wmaybe-uninitialized] 8137 | ValNodeAddPointer(&(grp_sdp_sfp[i]), OBJ_SEQDESC, sdp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sqnutil3.c:8087:17: note: ‘sdp’ was declared here 8087 | SeqDescrPtr sdp; | ^~~ sqnutil3.c:8138:15: warning: ‘sfp’ may be used uninitialized [-Wmaybe-uninitialized] 8138 | else ValNodeAddPointer(&(grp_sdp_sfp[i]), OBJ_SEQFEAT, sfp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sqnutil3.c:8088:17: note: ‘sfp’ was declared here 8088 | SeqFeatPtr sfp; | ^~~ sqnutil3.c: In function ‘FindMismatchedComments’: sqnutil3.c:26612:47: warning: ‘sdp’ may be used uninitialized [-Wmaybe-uninitialized] 26612 | sprintf (fmt, sub_fmt, (CharPtr) sdp->data.ptrvalue); | ~~~~~~~~~^~~~~~~~~ sqnutil3.c:26580:15: note: ‘sdp’ was declared here 26580 | SeqDescrPtr sdp; | ^~~ sqnutil3.c: In function ‘FillInMissingTraces’: sqnutil3.c:35188:27: warning: ‘%s’ directive writing up to 4095 bytes into a region of size 252 [-Wformat-overflow=] 35188 | sprintf (cmmd, "%s -i %s -o %s", tracefetchcmd, path_in, path_out); | ^~ ~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from ../include/ncbilcl.h:154: In function ‘sprintf’, inlined from ‘FillInMissingTraces’ at sqnutil3.c:35188:5: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output 9 or more bytes (assuming 8199) into a destination of size 256 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF sqnutil4.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/sqnutils.h:48, from sqnutil4.c:45: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ sqnutil4.c: In function ‘ListClauses’: sqnutil4.c:8566:43: warning: variable ‘twobefore’ set but not used [-Wunused-but-set-variable] 8566 | FeatureClausePtr thisclause, onebefore, twobefore, oneafter, twoafter; | ^~~~~~~~~ sqnutil4.c: In function ‘SmashOneTallClause’: sqnutil4.c:9900:20: warning: variable ‘subclause_featlist’ set but not used [-Wunused-but-set-variable] 9900 | ValNodePtr subclause_featlist; | ^~~~~~~~~~~~~~~~~~ sqnutil4.c: In function ‘GetFeatureClauseForSeg’: sqnutil4.c:10787:21: warning: variable ‘start’ set but not used [-Wunused-but-set-variable] 10787 | Int4 start, stop; | ^~~~~ sqnutil4.c: In function ‘RemoveAutodefObjectsForDesc’: sqnutil4.c:13618:18: warning: unused variable ‘bssp’ [-Wunused-variable] 13618 | BioseqSetPtr bssp; | ^~~~ sqnutil4.c:13617:15: warning: unused variable ‘bsp’ [-Wunused-variable] 13617 | BioseqPtr bsp; | ^~~ sqnutil4.c: In function ‘ConvertProtToImpFunc’: sqnutil4.c:15072:17: warning: variable ‘entityID’ set but not used [-Wunused-but-set-variable] 15072 | Uint2 entityID; | ^~~~~~~~ sqnutil4.c: In function ‘ExtraCDSCreationActions’: sqnutil4.c:15989:28: warning: variable ‘nsep’ set but not used [-Wunused-but-set-variable] 15989 | SeqEntryPtr psep, nsep; | ^~~~ sqnutil4.c: In function ‘TESTDisplayQualCombo’: sqnutil4.c:17099:20: warning: variable ‘val’ set but not used [-Wunused-but-set-variable] 17099 | Int4 val; | ^~~ sqnutil4.c: In function ‘ConvertCDSToMatPeptideForOverlappingCDS’: sqnutil4.c:18589:15: warning: variable ‘crp’ set but not used [-Wunused-but-set-variable] 18589 | CdRegionPtr crp; | ^~~ sqnutil4.c: In function ‘AddNewUniqueAnnotations’: sqnutil4.c:18780:39: warning: variable ‘sap_tmp_next’ set but not used [-Wunused-but-set-variable] 18780 | SeqAnnotPtr sap, sap_next, sap_tmp, sap_tmp_next, sap_copy, last_sap; | ^~~~~~~~~~~~ sqnutil4.c: In function ‘AssignBioseqToLineageGroup’: sqnutil4.c:19443:27: warning: variable ‘vnp_last’ set but not used [-Wunused-but-set-variable] 19443 | ValNodePtr list, vnp, vnp_last = NULL; | ^~~~~~~~ In file included from ../include/samutil.h:234, from ../include/alignmgr.h:266, from sqnutil4.c:58: ../include/objalignloc.h: At top level: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ In file included from ../include/tax3api.h:51, from sqnutil4.c:64: ../include/objtax3.h:183:31: warning: ‘Value_valueFree’ declared ‘static’ but never defined [-Wunused-function] 183 | static Value_valuePtr LIBCALL Value_valueFree PROTO ((Value_valuePtr )); | ^~~~~~~~~~~~~~~ ../include/objtax3.h:184:31: warning: ‘Value_valueAsnRead’ declared ‘static’ but never defined [-Wunused-function] 184 | static Value_valuePtr LIBCALL Value_valueAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~ ../include/objtax3.h:185:24: warning: ‘Value_valueAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 185 | static Boolean LIBCALL Value_valueAsnWrite PROTO (( Value_valuePtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~ sqnutil4.c:17248:13: warning: ‘TESTDisplayList’ defined but not used [-Wunused-function] 17248 | static void TESTDisplayList (ValNodePtr new_list) | ^~~~~~~~~~~~~~~ sqnutil4.c:17219:19: warning: ‘ExpandOneComboListUsingAllPresentQuals’ defined but not used [-Wunused-function] 17219 | static ValNodePtr ExpandOneComboListUsingAllPresentQuals (QualComboPtr q) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sqnutil4.c:16930:16: warning: ‘RemoveFieldFromUniqBioSrcGrpList’ defined but not used [-Wunused-function] 16930 | static Boolean RemoveFieldFromUniqBioSrcGrpList (ValNodePtr list, FieldTypePtr field) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sqnutil4.c:10029:19: warning: ‘RemoveAllButLastCDS’ defined but not used [-Wunused-function] 10029 | static ValNodePtr RemoveAllButLastCDS ( | ^~~~~~~~~~~~~~~~~~~ sqnutil4.c:9998:13: warning: ‘SmashTallClauses’ defined but not used [-Wunused-function] 9998 | static void SmashTallClauses ( | ^~~~~~~~~~~~~~~~ sqnutil4.c:9834:13: warning: ‘RemoveFeats’ defined but not used [-Wunused-function] 9834 | static void RemoveFeats ( | ^~~~~~~~~~~ sqnutil4.c:5211:13: warning: ‘CountFeatures’ defined but not used [-Wunused-function] 5211 | static Int4 CountFeatures ( | ^~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF subutil.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objsset.h:48, from ../include/objsub.h:76, from ../include/subutil.h:50, from subutil.c:54: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ subutil.c: In function ‘AddSeqLitToBioseq’: subutil.c:769:16: warning: variable ‘vnp’ set but not used [-Wunused-but-set-variable] 769 | ValNodePtr vnp; | ^~~ subutil.c: In function ‘AddReferenceToSegmentedEntry’: subutil.c:1163:22: warning: variable ‘prev’ set but not used [-Wunused-but-set-variable] 1163 | SeqEntryPtr tmp, prev; | ^~~~ subutil.c: In function ‘GetDNAConv’: subutil.c:1624:16: warning: array subscript has type ‘char’ [-Wchar-subscripts] 1624 | dnaconv[*ptr] = *ptr; | ^~~~ subutil.c: In function ‘GetProteinConv’: subutil.c:1646:17: warning: array subscript has type ‘char’ [-Wchar-subscripts] 1646 | protconv[*ptr] = *ptr; | ^~~~ subutil.c: In function ‘AddBasesToByteStore’: subutil.c:1669:26: warning: array subscript has type ‘char’ [-Wchar-subscripts] 1669 | residue = dnaconv[ch]; | ^ subutil.c: In function ‘AddAAsToByteStore’: subutil.c:1700:25: warning: array subscript has type ‘char’ [-Wchar-subscripts] 1700 | residue = aaconv[ch]; | ^ subutil.c: In function ‘CitArtBuild’: subutil.c:2683:21: warning: variable ‘tmp’ set but not used [-Wunused-but-set-variable] 2683 | ValNodePtr vnp, tmp; | ^~~ subutil.c: In function ‘MakeRNAFeature’: subutil.c:3639:29: warning: comparison between pointer and zero character constant [-Wpointer-compare] 3639 | if (AA_for_tRNA != '\0') | ^~ subutil.c:3639:17: note: did you mean to dereference the pointer? 3639 | if (AA_for_tRNA != '\0') | ^ subutil.c: At top level: subutil.c:3546:20: warning: ‘TranslateCdRegionNew’ defined but not used [-Wunused-function] 3546 | static SeqEntryPtr TranslateCdRegionNew ( | ^~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF edutil.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objsset.h:48, from ../include/sequtil.h:43, from ../include/seqport.h:47, from ../include/edutil.h:188, from edutil.c:365: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ edutil.c: In function ‘SeqLocsToDeltaSeqs’: edutil.c:795:14: warning: variable ‘sip’ set but not used [-Wunused-but-set-variable] 795 | SeqIdPtr sip; | ^~~ edutil.c: In function ‘SeqLocCopyPart’: edutil.c:2243:13: warning: variable ‘done’ set but not used [-Wunused-but-set-variable] 2243 | Boolean done, started, wasa_null, hada_null; | ^~~~ edutil.c: In function ‘IndexedSeqFeatsCopy’: edutil.c:2400:16: warning: variable ‘region’ set but not used [-Wunused-but-set-variable] 2400 | ValNodePtr region; | ^~~~~~ edutil.c: In function ‘SeqFeatsCopy’: edutil.c:2504:16: warning: variable ‘region’ set but not used [-Wunused-but-set-variable] 2504 | ValNodePtr region; | ^~~~~~ edutil.c: In function ‘SeqLocInsert’: edutil.c:3686:10: warning: variable ‘diff’ set but not used [-Wunused-but-set-variable] 3686 | Int4 diff, numpnt, i, tpos; | ^~~~ edutil.c: In function ‘SeqEdRecreateDeletedFeats’: edutil.c:4212:19: warning: variable ‘sfp’ set but not used [-Wunused-but-set-variable] 4212 | SeqFeatPtr sfp; | ^~~ edutil.c: In function ‘SeqEdSeqLocInsert’: edutil.c:4512:8: warning: variable ‘diff’ set but not used [-Wunused-but-set-variable] 4512 | Int4 diff, numpnt, i, tpos; | ^~~~ edutil.c: In function ‘SeqEdSeqLocDelete’: edutil.c:5069:10: warning: variable ‘diff’ set but not used [-Wunused-but-set-variable] 5069 | Int4 diff; | ^~~~ edutil.c: In function ‘SeqEdInsertAdjustFeat’: edutil.c:5300:7: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 5300 | && sfp->data.choice == SEQFEAT_CDREGION) edutil.c: In function ‘SeqEdDeleteFromBsp’: edutil.c:6485:11: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 6485 | && sfp->data.choice == SEQFEAT_CDREGION) edutil.c:6548:11: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 6548 | && sfp->data.choice == SEQFEAT_CDREGION) edutil.c:6437:21: warning: variable ‘merge_mode’ set but not used [-Wunused-but-set-variable] 6437 | Boolean merge_mode; | ^~~~~~~~~~ edutil.c:6428:21: warning: variable ‘feats_altered’ set but not used [-Wunused-but-set-variable] 6428 | Boolean feats_altered = FALSE; | ^~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asn2ff1.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objmgr.h:51, from ../include/seqmgr.h:48, from asn2ff1.c:42: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ asn2ff1.c: In function ‘asn2ff_print’: asn2ff1.c:289:25: warning: unused variable ‘dsp’ [-Wunused-variable] 289 | DescrStructPtr dsp = NULL; | ^~~ asn2ff1.c: In function ‘Asn2ffJobCreate’: asn2ff1.c:351:25: warning: unused variable ‘itemID’ [-Wunused-variable] 351 | Uint4 itemID = 0; | ^~~~~~ asn2ff1.c: In function ‘SeqEntryToEntrez’: asn2ff1.c:498:41: warning: unused variable ‘slp’ [-Wunused-variable] 498 | SeqLocPtr slp = NULL; | ^~~ asn2ff1.c: In function ‘SeqLocToFlat’: asn2ff1.c:1518:26: warning: unused variable ‘itemID’ [-Wunused-variable] 1518 | Uint4 itemID=0; | ^~~~~~ asn2ff1.c: In function ‘asn2ff_setup’: asn2ff1.c:1579:19: warning: variable ‘bsp’ set but not used [-Wunused-but-set-variable] 1579 | BioseqPtr bsp; | ^~~ asn2ff1.c: In function ‘PrintStatusLine’: asn2ff1.c:2197:36: warning: unused variable ‘ptr’ [-Wunused-variable] 2197 | CharPtr u, ptr=NULL; | ^~~ asn2ff1.c: In function ‘asn2gb_setup’: asn2ff1.c:2403:38: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 2403 | if (ajp->genome_view && gbp->map == FALSE || ajp->contig_view) { asn2ff1.c: At top level: asn2ff1.c:2189:13: warning: ‘PrintStatusLine’ defined but not used [-Wunused-function] 2189 | static void PrintStatusLine(Asn2ffJobPtr ajp, GBEntryPtr gbp) | ^~~~~~~~~~~~~~~ asn2ff1.c:2171:16: warning: ‘find_user_object’ defined but not used [-Wunused-function] 2171 | static Boolean find_user_object(BioseqPtr bsp) | ^~~~~~~~~~~~~~~~ asn2ff1.c:816:19: warning: ‘SeqEntryToLinkStrEx’ defined but not used [-Wunused-function] 816 | static LinkStrPtr SeqEntryToLinkStrEx(Asn2ffJobPtr ajp, SeqEntryPtr sep, LinkStrPtr lsp, Uint1 format) | ^~~~~~~~~~~~~~~~~~~ In file included from ../include/asn2ff6.h:142, from ../include/asn2ffp.h:50, from asn2ff1.c:45: ../include/asnprt.h:61:21: warning: ‘amp’ defined but not used [-Wunused-variable] 61 | static AsnModulePtr amp = ampx; | ^~~ ../include/asnprt.h:60:19: warning: ‘at’ defined but not used [-Wunused-variable] 60 | static AsnTypePtr at = atx; | ^~ ../include/asnprt.h:59:23: warning: ‘avn’ defined but not used [-Wunused-variable] 59 | static AsnValxNodePtr avn = NULL; | ^~~ ../include/asnprt.h:12:15: warning: ‘asnfilename’ defined but not used [-Wunused-variable] 12 | static char * asnfilename = "asnprt.h60"; | ^~~~~~~~~~~ asn2ff1.c: In function ‘print_taxinfo’: asn2ff1.c:4356:33: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 4356 | sprintf(tmp, "%d", gcode); | ^ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from ../include/ncbilcl.h:154: In function ‘sprintf’, inlined from ‘print_taxinfo’ at asn2ff1.c:4356:3: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 4 bytes into a destination of size 3 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ asn2ff1.c: In function ‘asn2embl_setup’: asn2ff1.c:2753:36: warning: ‘max’ may be used uninitialized [-Wmaybe-uninitialized] 2753 | for (index=0; index< max; index++) { | ~~~~~^~~~~ asn2ff1.c:2642:21: note: ‘max’ was declared here 2642 | Int4 index, max, total, pub_num, seqblks_num; | ^~~ asn2ff1.c: In function ‘asn2gp_setup’: asn2ff1.c:2942:45: warning: ‘feat_num’ may be used uninitialized [-Wmaybe-uninitialized] 2942 | for (index=0; index < feat_num; index++) { | ~~~~~~^~~~~~~~~~ asn2ff1.c:2795:14: note: ‘feat_num’ was declared here 2795 | Int4 feat_num; | ^~~~~~~~ asn2ff1.c: In function ‘SeqEntryToGBFlatNoSeq’: asn2ff1.c:1307:20: warning: ‘rsult’ may be used uninitialized [-Wmaybe-uninitialized] 1307 | return rsult; | ^~~~~ asn2ff1.c:1292:19: note: ‘rsult’ was declared here 1292 | Boolean rsult; | ^~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asn2ff2.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objsset.h:48, from ../include/sequtil.h:43, from ../include/gather.h:169, from asn2ff2.c:216: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ asn2ff2.c: In function ‘GetStrForBankit’: asn2ff2.c:518:33: warning: unused variable ‘i’ [-Wunused-variable] 518 | Int2 i=0, ptrlen = 0; | ^ asn2ff2.c: In function ‘GetCommentByChoice’: asn2ff2.c:769:41: warning: unused variable ‘string’ [-Wunused-variable] 769 | CharPtr buf = NULL, ptr = NULL, string=NULL, new_string=NULL, str=NULL; | ^~~~~~ asn2ff2.c: In function ‘GP_GetSeqDescrComms’: asn2ff2.c:1163:17: warning: unused variable ‘got_comment’ [-Wunused-variable] 1163 | Boolean got_comment=FALSE; | ^~~~~~~~~~~ asn2ff2.c: In function ‘GetGibbsqCommentLength’: asn2ff2.c:1600:14: warning: unused variable ‘gibbsq’ [-Wunused-variable] 1600 | Int4 gibbsq=0, total; | ^~~~~~ asn2ff2.c: In function ‘GatherDescrByChoice’: asn2ff2.c:1864:15: warning: variable ‘bspID’ set but not used [-Wunused-but-set-variable] 1864 | Uint2 bspID; | ^~~~~ asn2ff2.c: At top level: asn2ff2.c:1190:16: warning: ‘GetSPBlock’ defined but not used [-Wunused-function] 1190 | static CharPtr GetSPBlock (Asn2ffJobPtr ajp, GBEntryPtr gbp) | ^~~~~~~~~~ asn2ff2.c:680:16: warning: ‘GetEvidence’ defined but not used [-Wunused-function] 680 | static CharPtr GetEvidence(Asn2ffJobPtr ajp, GBEntryPtr gbp) | ^~~~~~~~~~~ asn2ff2.c:232:16: warning: ‘has_comment’ defined but not used [-Wunused-variable] 232 | static Boolean has_comment; | ^~~~~~~~~~~ In file included from ../include/asn2ff6.h:142, from ../include/asn2ffp.h:50, from asn2ff2.c:218: ../include/asnprt.h:61:21: warning: ‘amp’ defined but not used [-Wunused-variable] 61 | static AsnModulePtr amp = ampx; | ^~~ ../include/asnprt.h:60:19: warning: ‘at’ defined but not used [-Wunused-variable] 60 | static AsnTypePtr at = atx; | ^~ ../include/asnprt.h:59:23: warning: ‘avn’ defined but not used [-Wunused-variable] 59 | static AsnValxNodePtr avn = NULL; | ^~~ ../include/asnprt.h:12:15: warning: ‘asnfilename’ defined but not used [-Wunused-variable] 12 | static char * asnfilename = "asnprt.h60"; | ^~~~~~~~~~~ asn2ff2.c: In function ‘GetCommentByChoice’: asn2ff2.c:829:36: warning: ‘is_other’ may be used uninitialized [-Wmaybe-uninitialized] 829 | if (is_other == TRUE && mfp->completeness) { | ^ asn2ff2.c:772:17: note: ‘is_other’ was declared here 772 | Boolean is_other; | ^~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asn2ff3.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/asn2ffg.h:200, from ../include/asn2ffp.h:48, from asn2ff3.c:39: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ asn2ff3.c: In function ‘PutGeneFirst’: asn2ff3.c:1073:33: warning: unused variable ‘qual_temp’ [-Wunused-variable] 1073 | GBQualPtr gbqual, qual, qual_temp=NULL, qual_gene=NULL; | ^~~~~~~~~ asn2ff3.c:1072:17: warning: unused variable ‘still_looking’ [-Wunused-variable] 1072 | Boolean still_looking=TRUE; | ^~~~~~~~~~~~~ asn2ff3.c: In function ‘mRNAEvidenceComment’: asn2ff3.c:1157:33: warning: unused variable ‘Locus_id’ [-Wunused-variable] 1157 | Int4 Locus_id = 0; | ^~~~~~~~ asn2ff3.c: In function ‘Add_gene_id’: asn2ff3.c:2717:31: warning: format ‘%s’ expects argument of type ‘char *’, but argument 3 has type ‘Nlm_VoidPtr’ {aka ‘void *’} [-Wformat=] 2717 | sprintf(val, "GeneID:%s", vnp->data.ptrvalue); | ~^ ~~~~~~~~~~~~~~~~~~ | | | | char * Nlm_VoidPtr {aka void *} | %p asn2ff3.c: In function ‘Add_trid’: asn2ff3.c:3142:41: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘Nlm_Int8’ {aka ‘long long int’} [-Wformat=] 3142 | sprintf(buf, "%ld", sip->data.intvalue); | ~~^ ~~~~~~~~~~~~~~~~~~ | | | | long int Nlm_Int8 {aka long long int} | %lld asn2ff3.c:3123:16: warning: unused variable ‘gi’ [-Wunused-variable] 3123 | BIG_ID gi = -1; | ^~ asn2ff3.c: In function ‘AddPID’: asn2ff3.c:3185:49: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘Nlm_Int8’ {aka ‘long long int’} [-Wformat=] 3185 | sprintf(buf, "%ld", sip->data.intvalue); | ~~^ ~~~~~~~~~~~~~~~~~~ | | | | long int Nlm_Int8 {aka long long int} | %lld asn2ff3.c: At top level: asn2ff3.c:2702:13: warning: ‘Add_gene_id’ defined but not used [-Wunused-function] 2702 | static void Add_gene_id (GeneStructPtr gsp, SeqFeatPtr sfp_out) | ^~~~~~~~~~~ In file included from ../include/asn2ff6.h:142, from ../include/asn2ffp.h:50: ../include/asnprt.h:61:21: warning: ‘amp’ defined but not used [-Wunused-variable] 61 | static AsnModulePtr amp = ampx; | ^~~ ../include/asnprt.h:60:19: warning: ‘at’ defined but not used [-Wunused-variable] 60 | static AsnTypePtr at = atx; | ^~ ../include/asnprt.h:59:23: warning: ‘avn’ defined but not used [-Wunused-variable] 59 | static AsnValxNodePtr avn = NULL; | ^~~ ../include/asnprt.h:12:15: warning: ‘asnfilename’ defined but not used [-Wunused-variable] 12 | static char * asnfilename = "asnprt.h60"; | ^~~~~~~~~~~ asn2ff3.c: In function ‘Add_dbxref’: asn2ff3.c:269:24: warning: ‘val’ may be used uninitialized [-Wmaybe-uninitialized] 269 | if (val[0] != '\0') { | ~~~^~~ asn2ff3.c:216:17: note: ‘val’ was declared here 216 | CharPtr val; | ^~~ asn2ff3.c: In function ‘GettRNAaa’: asn2ff3.c:1618:28: warning: ‘seq_code’ may be used uninitialized [-Wmaybe-uninitialized] 1618 | if ((table=SeqCodeTableFind (seq_code)) != NULL) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ asn2ff3.c:1596:15: note: ‘seq_code’ was declared here 1596 | Uint1 seq_code; | ^~~~~~~~ In file included from ../include/ncbi.h:62: asn2ff3.c: In function ‘mRNAEvidenceComment’: ../include/ncbistr.h:331:25: warning: ‘ne_name’ may be used uninitialized [-Wmaybe-uninitialized] 331 | #define StringLen Nlm_StringLen asn2ff3.c:1206:47: note: in expansion of macro ‘StringLen’ 1206 | ptrlen += StringLen("ESTs") + StringLen(ne_name) + 10; | ^~~~~~~~~ asn2ff3.c:1153:53: note: ‘ne_name’ was declared here 1153 | CharPtr method = NULL, ptr, ne_name; | ^~~~~~~ asn2ff3.c: In function ‘ConvertToNAImpFeat’: asn2ff3.c:2254:51: warning: ‘%ld’ directive writing between 1 and 3 bytes into a region of size 2 [-Wformat-overflow=] 2254 | sprintf(buf_ptr, "%ld", (long) (cdr->frame)); | ^~~ asn2ff3.c:2254:50: note: directive argument in the range [1, 255] 2254 | sprintf(buf_ptr, "%ld", (long) (cdr->frame)); | ^~~~~ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from ../include/ncbilcl.h:154: In function ‘sprintf’, inlined from ‘ConvertToNAImpFeat’ at asn2ff3.c:2254:5: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 4 bytes into a destination of size 2 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asn2ff4.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/asn2ffg.h:200, from ../include/asn2ffp.h:48, from asn2ff4.c:273: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ asn2ff4.c: In function ‘FlatLocPoint’: asn2ff4.c:437:22: warning: variable ‘order’ set but not used [-Wunused-but-set-variable] 437 | static Uint1 order[NUM_SEQID]; | ^~~~~ asn2ff4.c: In function ‘FlatLocElement’: asn2ff4.c:778:17: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 778 | if (ASN2FF_SHOW_ERROR_MSG == TRUE) | ^~ asn2ff4.c:781:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 781 | break; | ^~~~~ asn2ff4.c: In function ‘do_FlatLoc’: asn2ff4.c:1122:28: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 1122 | if ( ! FlatVirtLoc( bsp, slp)) | ^ asn2ff4.c: In function ‘CreateImpFeatFromProt’: asn2ff4.c:1659:33: warning: variable ‘grp’ set but not used [-Wunused-but-set-variable] 1659 | GeneRefPtr grp; | ^~~ asn2ff4.c: In function ‘is_embl’: asn2ff4.c:2069:43: warning: the comparison will always evaluate as ‘false’ for the address of ‘accession’ will never be NULL [-Waddress] 2069 | if (gbp == NULL || gbp->accession == NULL) | ^~ ../include/asn2ffg.h:339:14: note: ‘accession’ declared here 339 | Char accession[60]; /* primary accession */ | ^~~~~~~~~ asn2ff4.c: In function ‘MatchNAGeneToFeat’: asn2ff4.c:2196:25: warning: variable ‘nsp’ set but not used [-Wunused-but-set-variable] 2196 | NoteStructPtr nsp; /* UNUSED */ | ^~~ asn2ff4.c: In function ‘MatchAAGeneToFeat’: asn2ff4.c:2367:33: warning: variable ‘nsp’ set but not used [-Wunused-but-set-variable] 2367 | NoteStructPtr nsp; /* UNUSED */ | ^~~ asn2ff4.c: In function ‘SortOrganizeFeat’: asn2ff4.c:2457:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2457 | if (ofp == NULL) | ^~ asn2ff4.c:2459:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2459 | if (ofp->sfpListsize > 0 && ofp->sortListsize < ofp->sfpListsize) { | ^~ asn2ff4.c: In function ‘OrganizeSeqFeat’: asn2ff4.c:2578:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2578 | if (ajp->ignore_top) | ^~ asn2ff4.c:2580:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2580 | gsc.seglevels = 1; | ^~~ asn2ff4.c: In function ‘GetSeqFeat’: asn2ff4.c:2660:21: warning: the comparison will always evaluate as ‘true’ for the address of ‘locus’ will never be NULL [-Waddress] 2660 | if (gbp->locus) { | ^~~ ../include/asn2ffg.h:338:14: note: ‘locus’ declared here 338 | Char locus[25]; /* locus */ | ^~~~~ asn2ff4.c:2664:21: warning: the comparison will always evaluate as ‘true’ for the address of ‘accession’ will never be NULL [-Waddress] 2664 | if (gbp->accession) { | ^~~ ../include/asn2ffg.h:339:14: note: ‘accession’ declared here 339 | Char accession[60]; /* primary accession */ | ^~~~~~~~~ In file included from ../include/asn2ff6.h:142, from ../include/asn2ffp.h:50: ../include/asnprt.h: At top level: ../include/asnprt.h:61:21: warning: ‘amp’ defined but not used [-Wunused-variable] 61 | static AsnModulePtr amp = ampx; | ^~~ ../include/asnprt.h:60:19: warning: ‘at’ defined but not used [-Wunused-variable] 60 | static AsnTypePtr at = atx; | ^~ ../include/asnprt.h:59:23: warning: ‘avn’ defined but not used [-Wunused-variable] 59 | static AsnValxNodePtr avn = NULL; | ^~~ ../include/asnprt.h:12:15: warning: ‘asnfilename’ defined but not used [-Wunused-variable] 12 | static char * asnfilename = "asnprt.h60"; | ^~~~~~~~~~~ asn2ff4.c: In function ‘CheckNewSfpLoc’: asn2ff4.c:1766:13: warning: ‘slp’ may be used uninitialized [-Wmaybe-uninitialized] 1766 | if (SeqIdForSameBioseq(SeqLocId(slp), bsp->id)) { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ asn2ff4.c:1761:19: note: ‘slp’ was declared here 1761 | SeqLocPtr slp, slp1 = NULL; | ^~~ asn2ff4.c: In function ‘CreateImpFeatFromProt’: asn2ff4.c:1723:39: warning: ‘%d’ directive writing between 1 and 3 bytes into a region of size 2 [-Wformat-overflow=] 1723 | sprintf(buf, "%d", cdr->frame); | ^~ asn2ff4.c:1723:38: note: directive argument in the range [1, 255] 1723 | sprintf(buf, "%d", cdr->frame); | ^~~~ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from ../include/ncbilcl.h:154: In function ‘sprintf’, inlined from ‘CreateImpFeatFromProt’ at asn2ff4.c:1723:4: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 4 bytes into a destination of size 2 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asn2ff5.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/asn2ffg.h:200, from ../include/asn2ffp.h:48, from asn2ff5.c:177: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ asn2ff5.c: In function ‘format_cit_sub’: asn2ff5.c:1023:78: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 1023 | format == EMBLPEPT_FMT && afp->choice == 1) | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ asn2ff5.c:926:41: warning: variable ‘need_space’ set but not used [-Wunused-but-set-variable] 926 | Boolean need_comma = FALSE, /*UNUSED*/need_space = TRUE; | ^~~~~~~~~~ asn2ff5.c: In function ‘format_thesis’: asn2ff5.c:1213:27: warning: variable ‘embl_format’ set but not used [-Wunused-but-set-variable] 1213 | Boolean /*UNUSED*/embl_format = FALSE; | ^~~~~~~~~~~ asn2ff5.c: In function ‘format_book’: asn2ff5.c:1296:17: warning: variable ‘embl_format’ set but not used [-Wunused-but-set-variable] 1296 | Boolean embl_format = FALSE; | ^~~~~~~~~~~ asn2ff5.c: In function ‘format_jourarticle’: asn2ff5.c:1680:28: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 1680 | if (ip->pages != NULL) | ^ asn2ff5.c: In function ‘StripParanthesis’: asn2ff5.c:2124:33: warning: value computed is not used [-Wunused-value] 2124 | temp++; *ptr_in++; | ^~~~~~~~~ asn2ff5.c: In function ‘PostARefErrMessage’: asn2ff5.c:3005:27: warning: variable ‘ignore_this’ set but not used [-Wunused-but-set-variable] 3005 | Boolean /*UNUSED*/ignore_this, submit=FALSE, error; | ^~~~~~~~~~~ asn2ff5.c: At top level: asn2ff5.c:188:26: warning: ‘GetSubmitterName’ declared ‘static’ but never defined [-Wunused-function] 188 | static CharPtr /*UNUSED*/GetSubmitterName PROTO ((Uint1 format, ValNodePtr pub)); | ^~~~~~~~~~~~~~~~ In file included from ../include/asn2ff6.h:142, from ../include/asn2ffp.h:50: ../include/asnprt.h:61:21: warning: ‘amp’ defined but not used [-Wunused-variable] 61 | static AsnModulePtr amp = ampx; | ^~~ ../include/asnprt.h:60:19: warning: ‘at’ defined but not used [-Wunused-variable] 60 | static AsnTypePtr at = atx; | ^~ ../include/asnprt.h:59:23: warning: ‘avn’ defined but not used [-Wunused-variable] 59 | static AsnValxNodePtr avn = NULL; | ^~~ ../include/asnprt.h:12:15: warning: ‘asnfilename’ defined but not used [-Wunused-variable] 12 | static char * asnfilename = "asnprt.h60"; | ^~~~~~~~~~~ asn2ff5.c: In function ‘CheckPubs’: asn2ff5.c:2768:20: warning: ‘status’ may be used uninitialized [-Wmaybe-uninitialized] 2768 | if (status < 0) | ^ asn2ff5.c:2746:24: note: ‘status’ was declared here 2746 | Int2 retval=0, status; | ^~~~~~ asn2ff5.c: In function ‘FlatJournal’: asn2ff5.c:1121:40: warning: ‘%ld’ directive writing between 1 and 10 bytes into a region of size 9 [-Wformat-overflow=] 1121 | sprintf(buf,"%s%ld ", " ", (long) pat_seqid); | ^~~ In function ‘format_patent’, inlined from ‘FlatJournal’ at asn2ff5.c:827:17: asn2ff5.c:1121:37: note: directive argument in the range [1, 2147483647] 1121 | sprintf(buf,"%s%ld ", " ", (long) pat_seqid); | ^~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from ../include/ncbilcl.h:154: In function ‘sprintf’, inlined from ‘format_patent’ at asn2ff5.c:1121:4, inlined from ‘FlatJournal’ at asn2ff5.c:827:17: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 4 and 13 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ asn2ff5.c: In function ‘FlatJournal’: asn2ff5.c:1115:40: warning: ‘%ld’ directive writing between 1 and 10 bytes into a region of size 9 [-Wformat-overflow=] 1115 | sprintf(buf,"%s%ld%s", "/", (long) pat_seqid, ", "); | ^~~ In function ‘format_patent’, inlined from ‘FlatJournal’ at asn2ff5.c:827:17: asn2ff5.c:1115:37: note: directive argument in the range [1, 2147483647] 1115 | sprintf(buf,"%s%ld%s", "/", (long) pat_seqid, ", "); | ^~~~~~~~~ In function ‘sprintf’, inlined from ‘format_patent’ at asn2ff5.c:1115:4, inlined from ‘FlatJournal’ at asn2ff5.c:827:17: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 5 and 14 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In function ‘format_patent’, inlined from ‘FlatJournal’ at asn2ff5.c:827:17: asn2ff5.c:1140:31: warning: ‘afp’ may be used uninitialized [-Wmaybe-uninitialized] 1140 | if (ap == NULL || afp == NULL) { | ^ asn2ff5.c: In function ‘FlatJournal’: asn2ff5.c:1051:18: note: ‘afp’ was declared here 1051 | AffilPtr afp; | ^~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asn2ff6.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/asn2ff6.h:134, from asn2ff6.c:347: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ asn2ff6.c: In function ‘AddGBQual’: asn2ff6.c:1327:25: warning: variable ‘note’ set but not used [-Wunused-but-set-variable] 1327 | GBQualPtr curq, note = NULL; | ^~~~ asn2ff6.c: In function ‘FlatOrganelle’: asn2ff6.c:1483:41: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1483 | if (! retval ) | ^~ asn2ff6.c:1486:49: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1486 | break; | ^~~~~ asn2ff6.c: In function ‘BioseqGetGBDivCodeEx’: asn2ff6.c:1700:30: warning: variable ‘diff’ set but not used [-Wunused-but-set-variable] 1700 | Int2 tech, /*UNUSED*/diff, retval = 0; | ^~~~ asn2ff6.c: In function ‘GR_PrintPubs’: asn2ff6.c:2297:48: warning: unused variable ‘stop’ [-Wunused-variable] 2297 | Int4 muid, pmid, pat_seqid=0, start=0, stop=0; | ^~~~ asn2ff6.c:2297:39: warning: unused variable ‘start’ [-Wunused-variable] 2297 | Int4 muid, pmid, pat_seqid=0, start=0, stop=0; | ^~~~~ asn2ff6.c:2297:20: warning: variable ‘pmid’ set but not used [-Wunused-but-set-variable] 2297 | Int4 muid, pmid, pat_seqid=0, start=0, stop=0; | ^~~~ asn2ff6.c:2296:17: warning: unused variable ‘descr’ [-Wunused-variable] 2296 | CharPtr descr = NULL; | ^~~~~ asn2ff6.c: In function ‘ValidateLocus’: asn2ff6.c:2786:24: warning: variable ‘base_locus_max’ set but not used [-Wunused-but-set-variable] 2786 | Int2 /*UNUSED*/base_locus_max, buf_index, exp, length, num_of_digits; | ^~~~~~~~~~~~~~ asn2ff6.c: In function ‘ValidateOtherAccession’: asn2ff6.c:2886:36: warning: unused variable ‘FiveNum’ [-Wunused-variable] 2886 | Boolean FirstLetter=FALSE, FiveNum = FALSE; | ^~~~~~~ asn2ff6.c:2886:17: warning: unused variable ‘FirstLetter’ [-Wunused-variable] 2886 | Boolean FirstLetter=FALSE, FiveNum = FALSE; | ^~~~~~~~~~~ asn2ff6.c: In function ‘AddExtraAccessions’: asn2ff6.c:3498:27: warning: variable ‘ncbi’ set but not used [-Wunused-but-set-variable] 3498 | Boolean /*UNUSED*/ncbi = FALSE; | ^~~~ asn2ff6.c: At top level: asn2ff6.c:2883:13: warning: ‘ValidateOtherAccession’ defined but not used [-Wunused-function] 2883 | static Int2 ValidateOtherAccession(CharPtr new_buf, CharPtr orig_buf) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from ../include/asn2ff6.h:142: ../include/asnprt.h:61:21: warning: ‘amp’ defined but not used [-Wunused-variable] 61 | static AsnModulePtr amp = ampx; | ^~~ ../include/asnprt.h:60:19: warning: ‘at’ defined but not used [-Wunused-variable] 60 | static AsnTypePtr at = atx; | ^~ ../include/asnprt.h:59:23: warning: ‘avn’ defined but not used [-Wunused-variable] 59 | static AsnValxNodePtr avn = NULL; | ^~~ ../include/asnprt.h:12:15: warning: ‘asnfilename’ defined but not used [-Wunused-variable] 12 | static char * asnfilename = "asnprt.h60"; | ^~~~~~~~~~~ asn2ff6.c: In function ‘ValidateLocus’: asn2ff6.c:2866:61: warning: ‘%ld’ directive writing between 1 and 6 bytes into a region of size 4 [-Wformat-overflow=] 2866 | sprintf(buf_ext+num_of_digits-exp, "%ld", (long) num_seg); | ^~~ asn2ff6.c:2866:60: note: directive argument in the range [-32768, 32767] 2866 | sprintf(buf_ext+num_of_digits-exp, "%ld", (long) num_seg); | ^~~~~ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from ../include/ncbilcl.h:154: In function ‘sprintf’, inlined from ‘ValidateLocus’ at asn2ff6.c:2866:4: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 7 bytes into a destination of size 4 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ asn2ff6.c: In function ‘ValidateLocus’: asn2ff6.c:2866:54: warning: ‘exp’ may be used uninitialized [-Wmaybe-uninitialized] 2866 | sprintf(buf_ext+num_of_digits-exp, "%ld", (long) num_seg); | ^ asn2ff6.c:2786:51: note: ‘exp’ was declared here 2786 | Int2 /*UNUSED*/base_locus_max, buf_index, exp, length, num_of_digits; | ^~~ asn2ff6.c: In function ‘MakeBaseLocusAwp’: asn2ff6.c:3093:45: warning: ‘num_of_digits’ may be used uninitialized [-Wmaybe-uninitialized] 3093 | base_locus_max = MAX_LOCUS_NAME_LEN - num_of_digits; asn2ff6.c:3070:56: note: ‘num_of_digits’ was declared here 3070 | Int2 index, length, base_locus_max, name_len, num_of_digits, num_seg; | ^~~~~~~~~~~~~ asn2ff6.c: In function ‘GetLocusPartsAwp’: asn2ff6.c:3313:53: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 3313 | sprintf(gbp->locus, "%-16s", buf_acc); | ^ In function ‘sprintf’, inlined from ‘GetLocusPartsAwp’ at asn2ff6.c:3313:6: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 17 and 26 bytes into a destination of size 25 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ asn2ff6.c: In function ‘GetLocusPartsAwp’: asn2ff6.c:3311:53: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 3311 | sprintf(gbp->locus, "%-10s", buf_acc); | ^ In function ‘sprintf’, inlined from ‘GetLocusPartsAwp’ at asn2ff6.c:3311:6: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 11 and 26 bytes into a destination of size 25 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ asn2ff6.c: In function ‘GetLocusPartsAwp’: asn2ff6.c:3270:61: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 3270 | sprintf(gbp->locus, "%-16s", buf_acc); | ^ In function ‘sprintf’, inlined from ‘GetLocusPartsAwp’ at asn2ff6.c:3270:7: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 17 and 26 bytes into a destination of size 25 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ asn2ff6.c: In function ‘GetLocusPartsAwp’: asn2ff6.c:3268:61: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 3268 | sprintf(gbp->locus, "%-10s", buf_acc); | ^ In function ‘sprintf’, inlined from ‘GetLocusPartsAwp’ at asn2ff6.c:3268:7: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 11 and 26 bytes into a destination of size 25 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asn2gnb1.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from asn2gnb1.c:43: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ asn2gnb1.c: In function ‘IsWholeWordSubstr’: asn2gnb1.c:2202:19: warning: variable ‘right’ set but not used [-Wunused-but-set-variable] 2202 | Boolean left, right; | ^~~~~ asn2gnb1.c: In function ‘s_LocusGetBaseName’: asn2gnb1.c:2350:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 2350 | else | ^~~~ asn2gnb1.c:2352:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 2352 | newLength = segNameLen - deleteChars; | ^~~~~~~~~ asn2gnb1.c: In function ‘DoOneSection’: asn2gnb1.c:2522:24: warning: variable ‘iasp’ set but not used [-Wunused-but-set-variable] 2522 | IntAsn2gbSectPtr iasp; | ^~~~ asn2gnb1.c:2514:24: warning: variable ‘bkmask’ set but not used [-Wunused-but-set-variable] 2514 | BlockMask bkmask; | ^~~~~~ asn2gnb1.c: In function ‘Count2Seg’: asn2gnb1.c:3438:18: warning: variable ‘to’ set but not used [-Wunused-but-set-variable] 3438 | Int4 to; | ^~ asn2gnb1.c:3436:18: warning: variable ‘parent’ set but not used [-Wunused-but-set-variable] 3436 | BioseqPtr parent; | ^~~~~~ asn2gnb1.c: At top level: asn2gnb1.c:3714:33: warning: missing braces around initializer [-Wmissing-braces] 3714 | static ModeFlags flagTable [] = { | ^ asn2gnb1.c:3714:33: warning: missing braces around initializer [-Wmissing-braces] asn2gnb1.c:3714:33: warning: missing braces around initializer [-Wmissing-braces] asn2gnb1.c:3714:33: warning: missing braces around initializer [-Wmissing-braces] asn2gnb1.c:3714:33: warning: missing braces around initializer [-Wmissing-braces] asn2gnb1.c: In function ‘SeqIdWriteForTable’: asn2gnb1.c:5808:13: warning: variable ‘pdb’ set but not used [-Wunused-but-set-variable] 5808 | pdb = NULL, general = NULL, gi = NULL; | ^~~ asn2gnb1.c:5807:40: warning: variable ‘patent’ set but not used [-Wunused-but-set-variable] 5807 | SeqIdPtr accn = NULL, local = NULL, patent = NULL, | ^~~~~~ In file included from ../include/ncbi.h:58: asn2gnb1.c: In function ‘DoImmediateFormat’: ../include/ncbistd.h:255:29: warning: comparison between ‘enum ’ and ‘enum ’ [-Wenum-compare] 255 | #define MAX(a,b) ((a)>=(b)?(a):(b)) | ^~ asn2gnb1.c:6951:19: note: in expansion of macro ‘MAX’ 6951 | max = (size_t) (MAX (ASN2GNBK_TOTAL_SOURCE, ASN2GNBK_TOTAL_FEATUR)); | ^~~ asn2gnb1.c:6930:20: warning: variable ‘is_www’ set but not used [-Wunused-but-set-variable] 6930 | Boolean is_www; | ^~~~~~ asn2gnb1.c: In function ‘asn2gnbk_format’: ../include/ncbistd.h:255:29: warning: comparison between ‘enum ’ and ‘enum ’ [-Wenum-compare] 255 | #define MAX(a,b) ((a)>=(b)?(a):(b)) | ^~ asn2gnb1.c:7072:19: note: in expansion of macro ‘MAX’ 7072 | max = (size_t) (MAX (ASN2GNBK_TOTAL_SOURCE, ASN2GNBK_TOTAL_FEATUR)); | ^~~ asn2gnb1.c: In function ‘asn2gnbk_cleanup’: asn2gnb1.c:7118:21: warning: variable ‘iasp’ set but not used [-Wunused-but-set-variable] 7118 | IntAsn2gbSectPtr iasp; | ^~~~ asn2gnb1.c: In function ‘SeqEntryToGnbk’: asn2gnb1.c:7304:22: warning: variable ‘userdata’ set but not used [-Wunused-but-set-variable] 7304 | Pointer userdata = NULL; | ^~~~~~~~ asn2gnb1.c:7299:22: warning: variable ‘gbseq’ set but not used [-Wunused-but-set-variable] 7299 | GBSeqPtr gbseq = NULL; | ^~~~~ In file included from ../include/samutil.h:234, from ../include/alignmgr2.h:114, from asn2gnb1.c:58: ../include/objalignloc.h: At top level: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ asn2gnb1.c: In function ‘PrintFtableIntervals’: asn2gnb1.c:5463:28: warning: ‘ ’ directive writing 1 byte into a region of size between 0 and 62 [-Wformat-overflow=] 5463 | sprintf (str, "%s\t%s\t%s\n", str1, str2, label); | ^~ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from ../include/ncbilcl.h:154: In function ‘sprintf’, inlined from ‘PrintFtableIntervals’ at asn2gnb1.c:5463:3: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output 4 or more bytes (assuming 66) into a destination of size 64 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ asn2gnb1.c: In function ‘PrintFtableIntervals’: asn2gnb1.c:5487:30: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 5487 | sprintf (str, "%s\t%s\n", str1, str2); | ^ In function ‘sprintf’, inlined from ‘PrintFtableIntervals’ at asn2gnb1.c:5487:7: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 3 and 65 bytes into a destination of size 64 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asn2gnb2.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from asn2gnb2.c:42: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ asn2gnb2.c: In function ‘s_LocusAddSuffix’: asn2gnb2.c:217:11: warning: variable ‘ch’ set but not used [-Wunused-but-set-variable] 217 | Char ch; | ^~ asn2gnb2.c: In function ‘AddLocusBlock’: asn2gnb2.c:1361:66: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 1361 | } else if ((moltype >= 2 && moltype <= 8) || moltype >= 10 && moltype <= 11) { | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ asn2gnb2.c: In function ‘IsSuccessor’: asn2gnb2.c:1742:15: warning: comparison between pointer and zero character constant [-Wpointer-compare] 1742 | while (accp != '\0' && prevp != '\0') { | ^~ asn2gnb2.c:1742:10: note: did you mean to dereference the pointer? 1742 | while (accp != '\0' && prevp != '\0') { | ^ asn2gnb2.c:1742:34: warning: comparison between pointer and zero character constant [-Wpointer-compare] 1742 | while (accp != '\0' && prevp != '\0') { | ^~ asn2gnb2.c:1742:28: note: did you mean to dereference the pointer? 1742 | while (accp != '\0' && prevp != '\0') { | ^ asn2gnb2.c: In function ‘IsProjectAccn’: asn2gnb2.c:1767:38: warning: comparison between pointer and zero character constant [-Wpointer-compare] 1767 | for (ptr = acc, letters = 0; ptr != '\0' && IS_ALPHA(*ptr); ++ptr, ++letters) continue; | ^~ asn2gnb2.c:1767:34: note: did you mean to dereference the pointer? 1767 | for (ptr = acc, letters = 0; ptr != '\0' && IS_ALPHA(*ptr); ++ptr, ++letters) continue; | ^ asn2gnb2.c: In function ‘AddDblinkBlock’: asn2gnb2.c:2892:22: warning: variable ‘parentID’ set but not used [-Wunused-but-set-variable] 2892 | Int4 parentID; | ^~~~~~~~ asn2gnb2.c: In function ‘AddSourceOrganismBlock’: asn2gnb2.c:5056:22: warning: variable ‘common’ set but not used [-Wunused-but-set-variable] 5056 | CharPtr common; | ^~~~~~ asn2gnb2.c: In function ‘GetRefsOnBioseq’: asn2gnb2.c:5893:22: warning: variable ‘strand’ set but not used [-Wunused-but-set-variable] 5893 | Uint1 strand; | ^~~~~~ asn2gnb2.c:5890:22: warning: variable ‘split’ set but not used [-Wunused-but-set-variable] 5890 | Boolean split; | ^~~~~ asn2gnb2.c:5884:22: warning: variable ‘right’ set but not used [-Wunused-but-set-variable] 5884 | Int4 right; | ^~~~~ asn2gnb2.c:5878:22: warning: variable ‘left’ set but not used [-Wunused-but-set-variable] 5878 | Int4 left; | ^~~~ asn2gnb2.c: In function ‘AddLocusBlock’: asn2gnb2.c:239:24: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size 6 [-Wformat-overflow=] 239 | sprintf(segCountStr,"%d",awp->numsegs); | ^~ In function ‘s_LocusAddSuffix’, inlined from ‘AddLocusBlock’ at asn2gnb2.c:1190:9: asn2gnb2.c:239:23: note: directive argument in the range [2, 2147483647] 239 | sprintf(segCountStr,"%d",awp->numsegs); | ^~~~ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from ../include/ncbilcl.h:154: In function ‘sprintf’, inlined from ‘s_LocusAddSuffix’ at asn2gnb2.c:239:3, inlined from ‘AddLocusBlock’ at asn2gnb2.c:1190:9: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 11 bytes into a destination of size 6 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ asn2gnb2.c: In function ‘AddLocusBlock’: asn2gnb2.c:244:25: warning: ‘%0*d’ directive writing between 1 and 32768 bytes into a region of size 4 [-Wformat-overflow=] 244 | sprintf(segSuffix,"S%0*d",segCountStrLen,awp->seg); | ^~~~ In function ‘s_LocusAddSuffix’, inlined from ‘AddLocusBlock’ at asn2gnb2.c:1190:9: asn2gnb2.c:244:23: note: directive argument in the range [0, 65535] 244 | sprintf(segSuffix,"S%0*d",segCountStrLen,awp->seg); | ^~~~~~~ In function ‘sprintf’, inlined from ‘s_LocusAddSuffix’ at asn2gnb2.c:244:5, inlined from ‘AddLocusBlock’ at asn2gnb2.c:1190:9: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 3 and 32770 bytes into a destination of size 5 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ asn2gnb2.c: In function ‘AddLocusBlock’: asn2gnb2.c:246:24: warning: ‘%0*d’ directive writing between 1 and 32768 bytes into a region of size 5 [-Wformat-overflow=] 246 | sprintf(segSuffix,"%0*d",segCountStrLen,awp->seg); | ^~~~ In function ‘s_LocusAddSuffix’, inlined from ‘AddLocusBlock’ at asn2gnb2.c:1190:9: asn2gnb2.c:246:23: note: directive argument in the range [0, 65535] 246 | sprintf(segSuffix,"%0*d",segCountStrLen,awp->seg); | ^~~~~~ In function ‘sprintf’, inlined from ‘s_LocusAddSuffix’ at asn2gnb2.c:246:5, inlined from ‘AddLocusBlock’ at asn2gnb2.c:1190:9: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 32769 bytes into a destination of size 5 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ asn2gnb2.c: In function ‘AddLocusBlock’: asn2gnb2.c:1514:48: warning: ‘" title="Jump to the comment...’ directive writing 69 bytes into a region of size between 66 and 106 [-Wformat-overflow=] 1514 | sprintf (sect, "
  • Comment
    • ", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘sprintf’, inlined from ‘AddLocusBlock’ at asn2gnb2.c:1514:7: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 92 and 132 bytes into a destination of size 128 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ asn2gnb2.c: In function ‘AddLocusBlock’: asn2gnb2.c:1518:46: warning: ‘" title="Jump to the feature...’ directive writing 68 bytes into a region of size between 66 and 106 [-Wformat-overflow=] 1518 | sprintf (sect, "
  • Features
    • ", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘sprintf’, inlined from ‘AddLocusBlock’ at asn2gnb2.c:1518:5: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 91 and 131 bytes into a destination of size 128 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ asn2gnb2.c: In function ‘AddLocusBlock’: asn2gnb2.c:1527:117: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 1527 | sprintf (sect, "
  • Genome
    • ", | ^ In function ‘sprintf’, inlined from ‘AddLocusBlock’ at asn2gnb2.c:1527:7: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 89 and 129 bytes into a destination of size 128 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ asn2gnb2.c: In function ‘AddLocusBlock’: asn2gnb2.c:1532:117: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 1532 | sprintf (sect, "
  • Contig
    • ", | ^ In function ‘sprintf’, inlined from ‘AddLocusBlock’ at asn2gnb2.c:1532:7: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 89 and 129 bytes into a destination of size 128 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ asn2gnb2.c: In function ‘AddLocusBlock’: asn2gnb2.c:1579:81: warning: ‘%s’ directive writing up to 127 bytes into a region of size between 68 and 77 [-Wformat-overflow=] 1579 | sprintf (sect, "
  • Next
    • ", (long) nextGi, seqid); | ^~ ~~~~~ In function ‘sprintf’, inlined from ‘AddLocusBlock’ at asn2gnb2.c:1579:7: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 67 and 203 bytes into a destination of size 128 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ asn2gnb2.c: In function ‘AddLocusBlock’: asn2gnb2.c:1587:81: warning: ‘%s’ directive writing up to 127 bytes into a region of size between 67 and 77 [-Wformat-overflow=] 1587 | sprintf (sect, "
  • Next
    • ", (long) awp->nextGi, seqid); | ^~ ~~~~~ In function ‘sprintf’, inlined from ‘AddLocusBlock’ at asn2gnb2.c:1587:7: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 67 and 204 bytes into a destination of size 128 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ asn2gnb2.c: In function ‘AddLocusBlock’: asn2gnb2.c:1608:81: warning: ‘%s’ directive writing up to 127 bytes into a region of size between 67 and 77 [-Wformat-overflow=] 1608 | sprintf (sect, "
  • Previous
    • ", (long) awp->prevGi, seqid); | ^~ ~~~~~ In function ‘sprintf’, inlined from ‘AddLocusBlock’ at asn2gnb2.c:1608:7: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 71 and 208 bytes into a destination of size 128 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ asn2gnb2.c: In function ‘AddLocusBlock’: asn2gnb2.c:1600:81: warning: ‘%s’ directive writing up to 127 bytes into a region of size between 68 and 77 [-Wformat-overflow=] 1600 | sprintf (sect, "
  • Previous
    • ", (long) prevGi, seqid); | ^~ ~~~~~ In function ‘sprintf’, inlined from ‘AddLocusBlock’ at asn2gnb2.c:1600:7: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 71 and 207 bytes into a destination of size 128 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asn2gnb3.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from asn2gnb3.c:42: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ asn2gnb3.c: In function ‘GetStatusForRefTrack’: asn2gnb3.c:796:22: warning: variable ‘urf’ set but not used [-Wunused-but-set-variable] 796 | UserFieldPtr ufp, urf = NULL; | ^~~ asn2gnb3.c: In function ‘AddCommentBlock’: asn2gnb3.c:2656:22: warning: variable ‘is_wgs’ set but not used [-Wunused-but-set-variable] 2656 | Boolean is_wgs = FALSE; | ^~~~~~ asn2gnb3.c: In function ‘GetSourcesOnBioseq’: asn2gnb3.c:5472:22: warning: variable ‘strand’ set but not used [-Wunused-but-set-variable] 5472 | Uint1 strand; | ^~~~~~ asn2gnb3.c:5470:22: warning: variable ‘start’ set but not used [-Wunused-but-set-variable] 5470 | Int4 start; | ^~~~~ asn2gnb3.c:5468:22: warning: variable ‘split’ set but not used [-Wunused-but-set-variable] 5468 | Boolean split; | ^~~~~ asn2gnb3.c: In function ‘AddSourceFeatBlock’: asn2gnb3.c:5989:22: warning: unused variable ‘sip’ [-Wunused-variable] 5989 | SeqIdPtr sip; | ^~~ asn2gnb3.c: In function ‘GetFeatsOnCdsProduct’: asn2gnb3.c:6446:22: warning: variable ‘isRefSeq’ set but not used [-Wunused-but-set-variable] 6446 | Boolean isRefSeq; | ^~~~~~~~ asn2gnb3.c: In function ‘GetRemoteFeatsOnCdsProduct’: asn2gnb3.c:6595:20: warning: variable ‘lastsfp’ set but not used [-Wunused-but-set-variable] 6595 | SeqFeatPtr lastsfp; | ^~~~~~~ asn2gnb3.c:6594:20: warning: variable ‘lastsap’ set but not used [-Wunused-but-set-variable] 6594 | SeqAnnotPtr lastsap; | ^~~~~~~ asn2gnb3.c:6593:20: warning: variable ‘lastright’ set but not used [-Wunused-but-set-variable] 6593 | Int4 lastright; | ^~~~~~~~~ asn2gnb3.c:6592:20: warning: variable ‘lastleft’ set but not used [-Wunused-but-set-variable] 6592 | Int4 lastleft; | ^~~~~~~~ asn2gnb3.c:6591:20: warning: variable ‘isRefSeq’ set but not used [-Wunused-but-set-variable] 6591 | Boolean isRefSeq; | ^~~~~~~~ asn2gnb3.c: In function ‘GetFeatsOnBioseq’: asn2gnb3.c:6895:22: warning: variable ‘start’ set but not used [-Wunused-but-set-variable] 6895 | Int4 start; | ^~~~~ asn2gnb3.c:6866:22: warning: variable ‘icp’ set but not used [-Wunused-but-set-variable] 6866 | IntCdsBlockPtr icp; | ^~~ In file included from ../include/samutil.h:234, from ../include/alignmgr2.h:114, from asn2gnb3.c:57: ../include/objalignloc.h: At top level: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ asn2gnb3.c:1582:16: warning: ‘nsWGSGapsString’ defined but not used [-Wunused-variable] 1582 | static CharPtr nsWGSGapsString = "The strings of n's in this record represent gaps between contigs or uncallable bases."; | ^~~~~~~~~~~~~~~ asn2gnb3.c:1581:16: warning: ‘nsAreGapsString’ defined but not used [-Wunused-variable] 1581 | static CharPtr nsAreGapsString = "The strings of n's in this record represent gaps between contigs, and the length of each string corresponds to the length of the gap."; | ^~~~~~~~~~~~~~~ asn2gnb3.c: In function ‘AddCommentBlock’: asn2gnb3.c:3429:29: warning: ‘nm’ may be used uninitialized [-Wmaybe-uninitialized] 3429 | if (IS_protdb_accession (nm)) { | ^~~~~~~~~~~~~~~~~~~~~~~~ asn2gnb3.c:2676:22: note: ‘nm’ was declared here 2676 | CharPtr nm; | ^~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asn2gnb4.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from asn2gnb4.c:42: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ asn2gnb4.c: In function ‘FormatFeatureBlockQuals’: asn2gnb4.c:3723:50: warning: "/*" within comment [-Wcomment] 3723 | StringChr (str + 1, '(') == NULL /* && StringChr (str, ',') != NULL */) { asn2gnb4.c:3101:24: warning: variable ‘split’ set but not used [-Wunused-but-set-variable] 3101 | Boolean split; | ^~~~~ asn2gnb4.c:3042:24: warning: variable ‘at_end’ set but not used [-Wunused-but-set-variable] 3042 | Boolean at_end = FALSE; | ^~~~~~ asn2gnb4.c: In function ‘FF_asn2gb_www_featkey_Ex’: asn2gnb4.c:5325:16: warning: variable ‘prefix’ set but not used [-Wunused-but-set-variable] 5325 | CharPtr prefix = "?"; | ^~~~~~ asn2gnb4.c: In function ‘FormatFeatureBlockEx’: asn2gnb4.c:6572:22: warning: variable ‘split’ set but not used [-Wunused-but-set-variable] 6572 | Boolean split; | ^~~~~ In file included from ../include/ncbi.h:58: asn2gnb4.c: In function ‘DoImmediateRemoteFeatureFormat’: ../include/ncbistd.h:255:29: warning: comparison between ‘enum ’ and ‘enum ’ [-Wenum-compare] 255 | #define MAX(a,b) ((a)>=(b)?(a):(b)) | ^~ asn2gnb4.c:8796:19: note: in expansion of macro ‘MAX’ 8796 | max = (size_t) (MAX (ASN2GNBK_TOTAL_SOURCE, ASN2GNBK_TOTAL_FEATUR)); | ^~~ asn2gnb4.c: In function ‘FormatFeatureQuals’: ../include/ncbistd.h:255:29: warning: comparison between ‘enum ’ and ‘enum ’ [-Wenum-compare] 255 | #define MAX(a,b) ((a)>=(b)?(a):(b)) | ^~ asn2gnb4.c:8869:19: note: in expansion of macro ‘MAX’ 8869 | max = (size_t) (MAX (ASN2GNBK_TOTAL_SOURCE, ASN2GNBK_TOTAL_FEATUR)); | ^~~ In file included from ../include/samutil.h:234, from ../include/alignmgr2.h:114, from asn2gnb4.c:57: ../include/objalignloc.h: At top level: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ asn2gnb4.c: In function ‘FormatFeatureBlockEx’: asn2gnb4.c:7695:26: warning: ‘sep’ may be used uninitialized [-Wmaybe-uninitialized] 7695 | oldscope = SeqEntrySetScope (sep); | ^~~~~~~~~~~~~~~~~~~~~~ asn2gnb4.c:6566:22: note: ‘sep’ was declared here 6566 | SeqEntryPtr sep; | ^~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asn2gnb5.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from asn2gnb5.c:42: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ asn2gnb5.c: In function ‘FormatCitBookArt’: asn2gnb5.c:2108:16: warning: variable ‘vnp’ set but not used [-Wunused-but-set-variable] 2108 | ValNodePtr vnp; | ^~~ In file included from ../include/samutil.h:234, from ../include/alignmgr2.h:114, from asn2gnb5.c:57: ../include/objalignloc.h: At top level: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ asn2gnb5.c: In function ‘FormatReferenceBlock’: asn2gnb5.c:2553:22: warning: ‘%ld’ directive writing between 1 and 10 bytes into a region of size 9 [-Wformat-overflow=] 2553 | sprintf(buf,"%s%ld ", " ", (long) pat_seqid); | ^~~ In function ‘FormatCitPat’, inlined from ‘GetPubJournal’ at asn2gnb5.c:2983:21, inlined from ‘FormatReferenceBlock’ at asn2gnb5.c:3931:9: asn2gnb5.c:2553:19: note: directive argument in the range [1, 2147483647] 2553 | sprintf(buf,"%s%ld ", " ", (long) pat_seqid); | ^~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from ../include/ncbilcl.h:154: In function ‘sprintf’, inlined from ‘FormatCitPat’ at asn2gnb5.c:2553:7, inlined from ‘GetPubJournal’ at asn2gnb5.c:2983:21, inlined from ‘FormatReferenceBlock’ at asn2gnb5.c:3931:9: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 4 and 13 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ asn2gnb5.c: In function ‘FormatReferenceBlock’: asn2gnb5.c:2550:22: warning: ‘%ld’ directive writing between 1 and 10 bytes into a region of size 9 [-Wformat-overflow=] 2550 | sprintf(buf,"%s%ld%s", "/", (long) pat_seqid, ", "); | ^~~ In function ‘FormatCitPat’, inlined from ‘GetPubJournal’ at asn2gnb5.c:2983:21, inlined from ‘FormatReferenceBlock’ at asn2gnb5.c:3931:9: asn2gnb5.c:2550:19: note: directive argument in the range [1, 2147483647] 2550 | sprintf(buf,"%s%ld%s", "/", (long) pat_seqid, ", "); | ^~~~~~~~~ In function ‘sprintf’, inlined from ‘FormatCitPat’ at asn2gnb5.c:2550:7, inlined from ‘GetPubJournal’ at asn2gnb5.c:2983:21, inlined from ‘FormatReferenceBlock’ at asn2gnb5.c:3931:9: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 5 and 14 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF asn2gnb6.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from asn2gnb6.c:42: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ asn2gnb6.c: In function ‘FlatLocElement’: asn2gnb6.c:2546:27: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 2546 | if (sintp->to > 0 && | ~~~~~~~~~~~~~~^~ 2547 | (sintp->to != sintp->from || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2548 | sintp->if_from != NULL || | ~~~~~~~~~~~~~~~~~~~~~~~~~ 2549 | sintp->if_to != NULL) || | ~~~~~~~~~~~~~~~~~~~~~ asn2gnb6.c: In function ‘FormatContigBlock’: asn2gnb6.c:5701:20: warning: variable ‘dspnext’ set but not used [-Wunused-but-set-variable] 5701 | DeltaSeqPtr dspnext; | ^~~~~~~ asn2gnb6.c: In function ‘ProcessGapSpecialFormat’: asn2gnb6.c:6041:13: warning: unused variable ‘sip’ [-Wunused-variable] 6041 | SeqIdPtr sip; | ^~~ asn2gnb6.c: In function ‘FormatSequenceBlock’: asn2gnb6.c:6168:21: warning: variable ‘iasp’ set but not used [-Wunused-but-set-variable] 6168 | IntAsn2gbSectPtr iasp; | ^~~~ In file included from ../include/samutil.h:234, from ../include/alignmgr2.h:114, from asn2gnb6.c:57: ../include/objalignloc.h: At top level: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ asn2gnb6.c:76:16: warning: ‘link_lat_lon’ defined but not used [-Wunused-variable] 76 | static CharPtr link_lat_lon = "https://www.ncbi.nlm.nih.gov/projects/Sequin/latlonview.html?"; | ^~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ftusrstr.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ftusrstr.c:34: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF gbfeat.c gbfeat.c: In function ‘CkLabelType’: gbfeat.c:1465:47: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 1465 | for (str = bptr; *str != '\0' && IS_ALPHA(*str) || IS_DIGIT(*str) arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF gbftglob.c arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF gbparint.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/parsegb.h:57, from gbparint.c:102: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gbparint.c: In function ‘Nlm_gbparselex’: gbparint.c:2134:24: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 2134 | if (*current_col != '\0') | ^ gbparint.c: In function ‘Nlm_gbparselex_ver’: gbparint.c:2520:24: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 2520 | if (*current_col != '\0') | ^ gbparint.c: In function ‘Nlm_gbparselex’: gbparint.c:1903:9: warning: array subscript 0 is outside array bounds of ‘char[0]’ [-Warray-bounds=] 1903 | *(current_col +1) = Saved_ch; | ^~~~~~~~~~~~~~~~~ gbparint.c:1928:17: note: in expansion of macro ‘Nlm_lex_error_MACRO’ 1928 | Nlm_lex_error_MACRO( "Lex list not cleared on entry to Nlm_gbparselex") | ^~~~~~~~~~~~~~~~~~~ cc1: note: source object is likely at address zero gbparint.c: In function ‘Nlm_gbparselex_ver’: gbparint.c:1903:9: warning: array subscript 0 is outside array bounds of ‘char[0]’ [-Warray-bounds=] 1903 | *(current_col +1) = Saved_ch; | ^~~~~~~~~~~~~~~~~ gbparint.c:2314:17: note: in expansion of macro ‘Nlm_lex_error_MACRO’ 2314 | Nlm_lex_error_MACRO( "Lex list not cleared on entry to Nlm_gbparselex_ver") | ^~~~~~~~~~~~~~~~~~~ cc1: note: source object is likely at address zero arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF utilpars.c utilpars.c:112:39: warning: missing braces around initializer [-Wmissing-braces] 112 | ParFlat_AA_array[ParFlat_TOTAL_AA] = { | ^ 113 | "Ala", 'A', | { } 114 | "Asx", 'B', | { } 115 | "Cys", 'C', | { } 116 | "Asp", 'D', | { } 117 | "Glu", 'E', | { } 118 | "Phe", 'F', | { } 119 | "Gly", 'G', | { } 120 | "His", 'H', | { } 121 | "Ile", 'I', | { } 122 | "Xle", 'J', /* was - notice no 'J', breaks naive meaning of index -Karl */ | { } 123 | "Lys", 'K', | { } 124 | "Leu", 'L', | { } 125 | "Met", 'M', | { } 126 | "Asn", 'N', | { } 127 | "Pyl", 'O', /* was - no 'O' */ | { } 128 | "Pro", 'P', | { } 129 | "Gln", 'Q', | { } 130 | "Arg", 'R', | { } 131 | "Ser", 'S', | { } 132 | "Thr", 'T', | { } 133 | "Val", 'V', | { } 134 | "Trp", 'W', | { } 135 | "Sec", 'U', /* was - not in iupacaa */ | { } 136 | "Xxx", 'X', | { } 137 | "Tyr", 'Y', | { } 138 | "Glx", 'Z', | { } 139 | "TERM", '*', /* not in iupacaa */ /*changed by Tatiana 06.07.95?`*/ | { } 140 | "OTHER", 'X'}; | { } arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF utilpub.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objmgr.h:51, from utilpub.c:13: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ utilpub.c: In function ‘FindCit’: utilpub.c:998:43: warning: variable ‘ifp’ set but not used [-Wunused-but-set-variable] 998 | ImpFeatPtr /*UNUSED*/ifp; | ^~~ utilpub.c: In function ‘ChangeCitQual’: utilpub.c:1053:72: warning: variable ‘pub’ set but not used [-Wunused-but-set-variable] 1053 | ValNodePtr vnp, pubset = NULL, pub_min, /*UNUSED*/pub; | ^~~ utilpub.c:1052:41: warning: variable ‘descr’ set but not used [-Wunused-but-set-variable] 1052 | ValNodePtr PNTR vnpp, /*UNUSED*/descr; | ^~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ffprint.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/asn2ffg.h:200, from ../include/asn2ffp.h:48, from ffprint.c:127: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ffprint.c: In function ‘FFBSPrint’: ffprint.c:347:19: warning: unused variable ‘byte_sp’ [-Wunused-variable] 347 | ByteStorePtr byte_sp = NULL; | ^~~~~~~ ffprint.c: At top level: ffprint.c:420:16: warning: ‘ff_print_insert’ defined but not used [-Wunused-function] 420 | static CharPtr ff_print_insert(CharPtr str, CharPtr ins) | ^~~~~~~~~~~~~~~ In file included from ../include/asn2ff6.h:142, from ../include/asn2ffp.h:50: ../include/asnprt.h:61:21: warning: ‘amp’ defined but not used [-Wunused-variable] 61 | static AsnModulePtr amp = ampx; | ^~~ ../include/asnprt.h:60:19: warning: ‘at’ defined but not used [-Wunused-variable] 60 | static AsnTypePtr at = atx; | ^~ ../include/asnprt.h:59:23: warning: ‘avn’ defined but not used [-Wunused-variable] 59 | static AsnValxNodePtr avn = NULL; | ^~~ ../include/asnprt.h:12:15: warning: ‘asnfilename’ defined but not used [-Wunused-variable] 12 | static char * asnfilename = "asnprt.h60"; | ^~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF wprint.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from wprint.c:46: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ wprint.c: In function ‘LocPrintGenome’: wprint.c:1696:21: warning: unused variable ‘sep’ [-Wunused-variable] 1696 | SeqEntryPtr sep = NULL; | ^~~ wprint.c:1695:37: warning: unused variable ‘b’ [-Wunused-variable] 1695 | BioseqPtr bsp = NULL, b = NULL; | ^ wprint.c:1695:25: warning: unused variable ‘bsp’ [-Wunused-variable] 1695 | BioseqPtr bsp = NULL, b = NULL; | ^~~ wprint.c:1692:52: warning: unused variable ‘temp’ [-Wunused-variable] 1692 | static Char buf[14], val[166], temp[166]; | ^~~~ wprint.c: At top level: wprint.c:79:13: warning: ‘link_gdb_map’ defined but not used [-Wunused-variable] 79 | static Char link_gdb_map[MAX_WWWBUF]; | ^~~~~~~~~~~~ wprint.c:77:13: warning: ‘link_pir’ defined but not used [-Wunused-variable] 77 | static Char link_pir[MAX_WWWBUF]; | ^~~~~~~~ In file included from ../include/asn2ff6.h:142, from ../include/asn2ffp.h:50, from wprint.c:51: ../include/asnprt.h:61:21: warning: ‘amp’ defined but not used [-Wunused-variable] 61 | static AsnModulePtr amp = ampx; | ^~~ ../include/asnprt.h:60:19: warning: ‘at’ defined but not used [-Wunused-variable] 60 | static AsnTypePtr at = atx; | ^~ ../include/asnprt.h:59:23: warning: ‘avn’ defined but not used [-Wunused-variable] 59 | static AsnValxNodePtr avn = NULL; | ^~~ ../include/asnprt.h:12:15: warning: ‘asnfilename’ defined but not used [-Wunused-variable] 12 | static char * asnfilename = "asnprt.h60"; | ^~~~~~~~~~~ wprint.c: In function ‘PrintDate’: wprint.c:188:41: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 188 | sprintf(day, "%d", (int) (date -> data[3] )); | ^ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from ../include/ncbilcl.h:154: In function ‘sprintf’, inlined from ‘PrintDate’ at wprint.c:188:4: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 4 bytes into a destination of size 3 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ wprint.c: In function ‘www_db_xref’: wprint.c:969:48: warning: ‘%d’ directive writing between 1 and 6 bytes into a region of size between 4 and 9 [-Wformat-overflow=] 969 | sprintf(id, "%d%d", id1, id2); | ^~ wprint.c:969:45: note: directive argument in the range [-32768, 32767] 969 | sprintf(id, "%d%d", id1, id2); | ^~~~~~ In function ‘sprintf’, inlined from ‘www_db_xref’ at wprint.c:969:5: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 3 and 13 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In file included from ../include/ncbi.h:62: wprint.c: In function ‘www_xref’: ../include/ncbistr.h:331:25: warning: ‘link’ may be used uninitialized [-Wmaybe-uninitialized] 331 | #define StringLen Nlm_StringLen wprint.c:1377:29: note: in expansion of macro ‘StringLen’ 1377 | l = StringLen(link); | ^~~~~~~~~ wprint.c:1358:20: note: ‘link’ was declared here 1358 | CharPtr s, link, prefix, ss; | ^~~~ ../include/ncbistr.h:331:25: warning: ‘prefix’ may be used uninitialized [-Wmaybe-uninitialized] 331 | #define StringLen Nlm_StringLen wprint.c:1378:30: note: in expansion of macro ‘StringLen’ 1378 | ll = StringLen(prefix); | ^~~~~~~~~ wprint.c:1358:26: note: ‘prefix’ was declared here 1358 | CharPtr s, link, prefix, ss; | ^~~~~~ wprint.c: In function ‘www_xref_button’: ../include/ncbistr.h:331:25: warning: ‘link’ may be used uninitialized [-Wmaybe-uninitialized] 331 | #define StringLen Nlm_StringLen wprint.c:1420:29: note: in expansion of macro ‘StringLen’ 1420 | l = StringLen(link); | ^~~~~~~~~ wprint.c:1398:20: note: ‘link’ was declared here 1398 | CharPtr s, link, prefix, ss; | ^~~~ ../include/ncbistr.h:331:25: warning: ‘prefix’ may be used uninitialized [-Wmaybe-uninitialized] 331 | #define StringLen Nlm_StringLen wprint.c:1421:30: note: in expansion of macro ‘StringLen’ 1421 | ll = StringLen(prefix); | ^~~~~~~~~ wprint.c:1398:26: note: ‘prefix’ was declared here 1398 | CharPtr s, link, prefix, ss; | ^~~~~~ wprint.c: In function ‘PrintSPBlock’: wprint.c:1570:41: warning: ‘s’ may be used uninitialized [-Wmaybe-uninitialized] 1570 | AddLink(s); | ^~~~~~~~~~ wprint.c:1443:31: note: ‘s’ was declared here 1443 | CharPtr link, prefix, s; | ^ In function ‘sprintf’, inlined from ‘PrintSPBlock’ at wprint.c:1601:6: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: warning: ‘prefix’ may be used uninitialized [-Wmaybe-uninitialized] 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ wprint.c: In function ‘PrintSPBlock’: wprint.c:1443:23: note: ‘prefix’ was declared here 1443 | CharPtr link, prefix, s; | ^~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF satutil.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/satutil.h:12, from satutil.c:87: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ satutil.c: In function ‘CopyFeatureFromAlign’: satutil.c:1011:17: warning: variable ‘check_gap’ set but not used [-Wunused-but-set-variable] 1011 | Boolean check_gap; | ^~~~~~~~~ satutil.c: At top level: satutil.c:168:16: warning: ‘bk_map_one_location’ defined but not used [-Wunused-function] 168 | static Boolean bk_map_one_location(SeqLocPtr source_loc, SeqAlignPtr align, SeqIdPtr target_sip, Boolean check_gap, Int4Ptr r_start, Int4Ptr r_stop, SeqLocPtr PNTR head_slp) | ^~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF seqmgr.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objsset.h:48, from ../include/explore.h:49, from seqmgr.c:53: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ seqmgr.c: In function ‘SeqEntrySetScope’: seqmgr.c:311:13: warning: variable ‘found’ set but not used [-Wunused-but-set-variable] 311 | Boolean found; | ^~~~~ seqmgr.c: In function ‘ClearBioseqFindCache’: seqmgr.c:897:14: warning: variable ‘smp’ set but not used [-Wunused-but-set-variable] 897 | SeqMgrPtr smp; | ^~~ seqmgr.c: In function ‘GetUniGeneIDForSeqId’: seqmgr.c:3676:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 3676 | if(StringCmp(db_tag->db, "BSNR") == 0) | ^~ seqmgr.c:3678:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 3678 | if(StringCmp(db_tag->db, "HUMGEN") == 0) | ^~ seqmgr.c: In function ‘SeqMgrGetExtraDataForOmdp’: seqmgr.c:3736:14: warning: variable ‘omp’ set but not used [-Wunused-but-set-variable] 3736 | ObjMgrPtr omp; | ^~~ seqmgr.c: In function ‘CheckForTransSplice’: seqmgr.c:5657:14: warning: variable ‘prev’ set but not used [-Wunused-but-set-variable] 5657 | SeqLocPtr prev, tmp; | ^~~~ seqmgr.c: In function ‘SeqEntryAsnOut’: seqmgr.c:11799:41: warning: variable ‘aopp_desc’ set but not used [-Wunused-but-set-variable] 11799 | AsnOptionPtr aopp_feat = NULL, aopp_desc = NULL; | ^~~~~~~~~ seqmgr.c:11799:23: warning: variable ‘aopp_feat’ set but not used [-Wunused-but-set-variable] 11799 | AsnOptionPtr aopp_feat = NULL, aopp_desc = NULL; | ^~~~~~~~~ In file included from ../include/samutil.h:234, from ../include/alignmgr2.h:114, from seqmgr.c:63: ../include/objalignloc.h: At top level: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objmgr.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objmgr.h:51, from objmgr.c:51: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objmgr.c: In function ‘ObjMgrReapOne’: objmgr.c:2727:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2727 | if (omp->reaping) /* protect against recursion caused by ObjMgrSendMsg */ | ^~ objmgr.c:2730:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2730 | lowest = UINT4_MAX; | ^~~~~~ objmgr.c: In function ‘ObjMgrDeSelectStructFunc’: objmgr.c:3767:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 3767 | if (next != NULL) | ^~ objmgr.c:3770:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 3770 | ObjMgrSendDeSelMsg (omp, ssp->entityID, ssp->itemID, ssp->itemtype, ssp->regiontype, ssp->region); | ^~~~~~~~~~~~~~~~~~ objmgr.c: In function ‘ObjMgrSelectFunc2’: objmgr.c:4031:22: warning: variable ‘retval’ set but not used [-Wunused-but-set-variable] 4031 | Boolean retval = FALSE; | ^~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF gather.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objsset.h:48, from ../include/sequtil.h:43, from ../include/gather.h:169, from gather.c:44: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gather.c: In function ‘AttachDataProc’: gather.c:4827:30: warning: variable ‘into_seqentry’ set but not used [-Wunused-but-set-variable] 4827 | Boolean no_good = FALSE, into_seqentry = FALSE; | ^~~~~~~~~~~~~ In file included from ../include/ncbi.h:59: gather.c: In function ‘GatherSeqFeat’: ../include/ncbimem.h:232:23: warning: ‘lrdp’ may be used uninitialized [-Wmaybe-uninitialized] 232 | #define MemFree Nlm_MemFree gather.c:1532:33: note: in expansion of macro ‘MemFree’ 1532 | MemFree(trdp); | ^~~~~~~ gather.c:1404:38: note: ‘lrdp’ was declared here 1404 | GatherRangePtr rdp = NULL, trdp, lrdp; | ^~~~ gather.c:1527:32: warning: ‘max_interval’ may be used uninitialized [-Wmaybe-uninitialized] 1527 | if (ctr >= max_interval) | ^ gather.c:1407:15: note: ‘max_interval’ was declared here 1407 | Int2 ctr, max_interval, i, numcheck, j; | ^~~~~~~~~~~~ gather.c: In function ‘gather_align_data’: gather.c:2438:70: warning: ‘mag_val’ may be used uninitialized [-Wmaybe-uninitialized] 2438 | t_range.right = t_range.left+len * mag_val -1; | ~~~~^~~~~~~~~ gather.c:2218:10: note: ‘mag_val’ was declared here 2218 | Int4 mag_val; /*the magnification value */ | ^~~~~~~ gather.c:2450:34: warning: ‘master_loc’ may be used uninitialized [-Wmaybe-uninitialized] 2450 | c_stop = SeqLocStop(master_loc); | ^~~~~~~~~~~~~~~~~~~~~~ gather.c:2219:15: note: ‘master_loc’ was declared here 2219 | SeqLocPtr master_loc, m_loc; | ^~~~~~~~~~ gather.c:2280:12: warning: ‘h_start’ may be used uninitialized [-Wmaybe-uninitialized] 2280 | if(!(h_stop < m_start || h_start > m_stop)) /*it is within the range*/ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gather.c:2209:10: note: ‘h_start’ was declared here 2209 | Int4 h_start, h_stop; | ^~~~~~~ gather.c:2280:11: warning: ‘h_stop’ may be used uninitialized [-Wmaybe-uninitialized] 2280 | if(!(h_stop < m_start || h_start > m_stop)) /*it is within the range*/ | ^ gather.c:2209:19: note: ‘h_stop’ was declared here 2209 | Int4 h_start, h_stop; | ^~~~~~ gather.c: In function ‘GatherBioseqFunc’: gather.c:3307:53: warning: ‘tlen’ may be used uninitialized [-Wmaybe-uninitialized] 3307 | rdp->right = offset + tlen - 1; | ~~~~~~~^~~~~~ gather.c:3022:35: note: ‘tlen’ was declared here 3022 | Int4 offset, toffset, seglen, tlen; | ^~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF accmmdbs.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objsset.h:48, from ../include/accentr.h:125, from accmmdbs.c:120: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF acccn3ds.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objsset.h:48, from ../include/accentr.h:125, from acccn3ds.c:62: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF lsqfetch.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objmgr.h:51, from ../include/seqmgr.h:48, from ../include/lsqfetch.h:110, from lsqfetch.c:44: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ lsqfetch.c: In function ‘ChangeLocalToGenbank’: lsqfetch.c:1403:21: warning: ‘%s’ directive writing up to 40 bytes into a region of size 38 [-Wformat-overflow=] 1403 | sprintf (tmp, "gb|%s", id); | ^~ ~~ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from ../include/ncbilcl.h:154: In function ‘sprintf’, inlined from ‘ChangeLocalToGenbank’ at lsqfetch.c:1403:3: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 4 and 44 bytes into a destination of size 41 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF findrepl.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from findrepl.c:45: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF codon.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/codon.h:61, from codon.c:2: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ codon.c: In function ‘make_cds_paragraph’: codon.c:262:14: warning: variable ‘space_len’ set but not used [-Wunused-but-set-variable] 262 | Int4 space_len, i; | ^~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF jzcoll.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/maputil.h:113, from ../include/jzcoll.h:123, from jzcoll.c:54: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ jzcoll.c: In function ‘load_default_matrix’: jzcoll.c:99:34: warning: array subscript has type ‘char’ [-Wchar-subscripts] 99 | ss[pchars[i]][pchars[j]] = webb_blosum62[i][j]; | ~~~~~~^~~ jzcoll.c:99:45: warning: array subscript has type ‘char’ [-Wchar-subscripts] 99 | ss[pchars[i]][pchars[j]] = webb_blosum62[i][j]; | ~~~~~~^~~ jzcoll.c:101:26: warning: array subscript has type ‘char’ [-Wchar-subscripts] 101 | ss[pchars[i]]['*'] = ss['*'][pchars[i]] = -4; | ~~~~~~^~~ jzcoll.c:101:52: warning: array subscript has type ‘char’ [-Wchar-subscripts] 101 | ss[pchars[i]]['*'] = ss['*'][pchars[i]] = -4; | ~~~~~~^~~ jzcoll.c: In function ‘GetUseThisGi’: jzcoll.c:143:17: warning: unused variable ‘retval’ [-Wunused-variable] 143 | Boolean retval=FALSE; | ^~~~~~ jzcoll.c: In function ‘buffer_for_feature’: jzcoll.c:514:14: warning: unused variable ‘i’ [-Wunused-variable] 514 | Int2 i=0; | ^ jzcoll.c: In function ‘ProcessTextInsertion’: jzcoll.c:878:14: warning: variable ‘last_ins’ set but not used [-Wunused-but-set-variable] 878 | Int4 last_ins; | ^~~~~~~~ jzcoll.c: In function ‘satcollfunc’: jzcoll.c:1748:27: warning: the comparison will always evaluate as ‘false’ for the address of ‘features’ will never be NULL [-Waddress] 1748 | if(csop->features == NULL && afp->all_feature == FALSE) | ^~ ../include/jzcoll.h:206:17: note: ‘features’ declared here 206 | Boolean features[FEATDEF_ANY]; /*for filtering unwanted features*/ | ^~~~~~~~ jzcoll.c:1723:19: warning: variable ‘head’ set but not used [-Wunused-but-set-variable] 1723 | SeqLocPtr head; | ^~~~ jzcoll.c:1721:15: warning: variable ‘strand’ set but not used [-Wunused-but-set-variable] 1721 | Uint1 strand; | ^~~~~~ jzcoll.c:1720:14: warning: variable ‘current_pos’ set but not used [-Wunused-but-set-variable] 1720 | Int4 current_pos; | ^~~~~~~~~~~ jzcoll.c:1714:19: warning: unused variable ‘slp’ [-Wunused-variable] 1714 | SeqLocPtr slp = NULL; | ^~~ jzcoll.c: In function ‘coll_align_data’: jzcoll.c:2631:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘Nlm_Int8’ {aka ‘long long int’} [-Wformat=] 2631 | sprintf(buf, "%d", gilist->data.intvalue); | ~^ ~~~~~~~~~~~~~~~~~~~~~ | | | | int Nlm_Int8 {aka long long int} | %lld jzcoll.c: In function ‘collect_anpnode_with_option’: jzcoll.c:3053:20: warning: unused variable ‘prev’ [-Wunused-variable] 3053 | ValNodePtr prev = NULL; | ^~~~ jzcoll.c: In function ‘ck_seqfeat_extra’: jzcoll.c:3414:17: warning: unused variable ‘has_gb’ [-Wunused-variable] 3414 | Boolean has_gb = FALSE, has_med = FALSE; | ^~~~~~ jzcoll.c: In function ‘collseqfunc’: jzcoll.c:3768:41: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 3768 | if(omtp->labelfunc !=NULL) | ^~ jzcoll.c:3770:49: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 3770 | fnp->landmark = check_feature_for_landmark(chp->thislabel, chp->gdata, sfp, gcp, chp->priority); | ^~~ jzcoll.c: In function ‘load_open_close_sts_mark’: jzcoll.c:4010:17: warning: variable ‘collected’ set but not used [-Wunused-but-set-variable] 4010 | Boolean collected = FALSE; | ^~~~~~~~~ jzcoll.c: In function ‘FeatNodeCompProc’: jzcoll.c:4225:22: warning: variable ‘gr2’ set but not used [-Wunused-but-set-variable] 4225 | GatherRange gr1, gr2; | ^~~ jzcoll.c:4225:17: warning: variable ‘gr1’ set but not used [-Wunused-but-set-variable] 4225 | GatherRange gr1, gr2; | ^~~ jzcoll.c: At top level: jzcoll.c:2316:16: warning: ‘stop_collecting_alignment’ defined but not used [-Wunused-function] 2316 | static Boolean stop_collecting_alignment(ValNodePtr anp_list, Int4 max_num) | ^~~~~~~~~~~~~~~~~~~~~~~~~ jzcoll.c:1654:16: warning: ‘collect_sequence_label’ defined but not used [-Wunused-function] 1654 | static Boolean collect_sequence_label(Uint1 format) | ^~~~~~~~~~~~~~~~~~~~~~ jzcoll.c: In function ‘load_text.isra’: jzcoll.c:421:41: warning: ‘smtp’ may be used uninitialized [-Wmaybe-uninitialized] 421 | stdaa_res = SeqMapTableConvert(smtp, m_res); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ jzcoll.c:274:20: note: ‘smtp’ was declared here 274 | SeqMapTablePtr smtp; | ^~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF jzmisc.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/jzmisc.h:86, from jzmisc.c:23: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF maputil.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/maputil.h:113, from maputil.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ maputil.c: In function ‘load_gene_list’: maputil.c:690:15: warning: variable ‘val’ set but not used [-Wunused-but-set-variable] 690 | Uint1 val; | ^~~ maputil.c: In function ‘gmarkfunc’: maputil.c:985:20: warning: variable ‘syn’ set but not used [-Wunused-but-set-variable] 985 | ValNodePtr syn = NULL; | ^~~ maputil.c: In function ‘get_location_for_query’: maputil.c:1265:1: warning: function may return address of local variable [-Wreturn-local-addr] 1265 | } | ^ maputil.c:1190:16: note: declared here 1190 | SeqLoc sl; | ^~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF mconsist.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objsset.h:48, from ../include/sequtil.h:43, from ../include/mconsist.h:4, from mconsist.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF macroapi.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from macroapi.c:45: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ macroapi.c: In function ‘AdvancedStringCompare’: macroapi.c:4463:23: warning: variable ‘init_target_match_len’ set but not used [-Wunused-but-set-variable] 4463 | Int4 len1, len2, init_target_match_len = 0, target_match_len = 0; | ^~~~~~~~~~~~~~~~~~~~~ macroapi.c: In function ‘RemoveGBQualMatch’: macroapi.c:6981:27: warning: variable ‘does_match’ set but not used [-Wunused-but-set-variable] 6981 | Boolean rval = FALSE, does_match, do_remove; | ^~~~~~~~~~ macroapi.c: In function ‘ParseCodonsRecognizedFromCommaDelimitedList’: macroapi.c:7726:41: warning: pointer targets in passing argument 1 of ‘ExpandWobbleCodon’ differ in signedness [-Wpointer-sign] 7726 | wobble_list = ExpandWobbleCodon(codon); | ^~~~~ | | | Nlm_Uint1 * {aka unsigned char *} macroapi.c:7636:46: note: expected ‘Nlm_CharPtr’ {aka ‘char *’} but argument is of type ‘Nlm_Uint1 *’ {aka ‘unsigned char *’} 7636 | static ValNodePtr ExpandWobbleCodon (CharPtr codon) macroapi.c: In function ‘GetQualFromFeatureAnyType’: macroapi.c:8537:8: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 8536 | if (str == NULL | ~~~~~~~~~~~ 8537 | && (field->choice == FeatQualChoice_legal_qual && field->data.intvalue == Feat_qual_legal_pseudo) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ macroapi.c:8681:23: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘Nlm_Int8’ {aka ‘long long int’} [-Wformat=] 8681 | sprintf (buf, "%d", vnp->data.intvalue); | ~^ ~~~~~~~~~~~~~~~~~~ | | | | int Nlm_Int8 {aka long long int} | %lld macroapi.c: In function ‘SetNameInPrimerList’: macroapi.c:10682:21: warning: variable ‘prev_pp’ set but not used [-Wunused-but-set-variable] 10682 | PCRPrimerPtr pp, prev_pp = NULL; | ^~~~~~~ macroapi.c: In function ‘SetSeqInPrimerList’: macroapi.c:10703:21: warning: variable ‘prev_pp’ set but not used [-Wunused-but-set-variable] 10703 | PCRPrimerPtr pp, prev_pp = NULL; | ^~~~~~~ macroapi.c: In function ‘GetGenomeProjectIdFromBioseq’: macroapi.c:12881:27: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘Nlm_Int8’ {aka ‘long long int’} [-Wformat=] 12881 | sprintf (buf, "%d", ufp->data.intvalue); | ~^ ~~~~~~~~~~~~~~~~~~ | | | | int Nlm_Int8 {aka long long int} | %lld macroapi.c: In function ‘RemoveGenomeProjectIdFromBioseq’: macroapi.c:12916:27: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘Nlm_Int8’ {aka ‘long long int’} [-Wformat=] 12916 | sprintf (buf, "%d", ufp->data.intvalue); | ~^ ~~~~~~~~~~~~~~~~~~ | | | | int Nlm_Int8 {aka long long int} | %lld macroapi.c: In function ‘SetGenomeProjectIdOnBioseq’: macroapi.c:12957:27: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘Nlm_Int8’ {aka ‘long long int’} [-Wformat=] 12957 | sprintf (buf, "%d", ufp->data.intvalue); | ~^ ~~~~~~~~~~~~~~~~~~ | | | | int Nlm_Int8 {aka long long int} | %lld macroapi.c: In function ‘GetPubFieldFromPub’: macroapi.c:15043:25: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘Nlm_Int8’ {aka ‘long long int’} [-Wformat=] 15043 | sprintf (str, "%d", the_pub->data.intvalue); | ~^ ~~~~~~~~~~~~~~~~~~~~~~ | | | | int Nlm_Int8 {aka long long int} | %lld macroapi.c: In function ‘GetCitListsForSeqEntry’: macroapi.c:15825:19: warning: variable ‘entityID’ set but not used [-Wunused-but-set-variable] 15825 | Uint2 entityID; | ^~~~~~~~ macroapi.c:15823:19: warning: variable ‘okay’ set but not used [-Wunused-but-set-variable] 15823 | Boolean okay; | ^~~~ macroapi.c: In function ‘GetPubclassQualFromPub’: macroapi.c:18324:11: warning: unused variable ‘str’ [-Wunused-variable] 18324 | CharPtr str = NULL; | ^~~ macroapi.c: In function ‘GetPubMLStatus’: macroapi.c:18681:14: warning: variable ‘csp’ set but not used [-Wunused-but-set-variable] 18681 | CitSubPtr csp; | ^~~ macroapi.c: In function ‘CollectDBLinkObjectsForApply’: macroapi.c:20029:72: warning: unused variable ‘tmp_tail’ [-Wunused-variable] 20029 | ValNodePtr target_list = NULL, bsp_list = NULL, tmp_list = NULL, tmp_tail = NULL, vnp; | ^~~~~~~~ macroapi.c:20029:55: warning: unused variable ‘tmp_list’ [-Wunused-variable] 20029 | ValNodePtr target_list = NULL, bsp_list = NULL, tmp_list = NULL, tmp_tail = NULL, vnp; | ^~~~~~~~ macroapi.c: In function ‘DoConvertActionToObjectListEx’: macroapi.c:20844:20: warning: unused variable ‘already_added’ [-Wunused-variable] 20844 | Boolean already_added, field_change; | ^~~~~~~~~~~~~ macroapi.c: In function ‘ApplyPartial5SetActionToSeqFeat’: macroapi.c:25749:16: warning: variable ‘strand’ set but not used [-Wunused-but-set-variable] 25749 | Uint1 strand; | ^~~~~~ macroapi.c: In function ‘ApplyPartial3SetActionToSeqFeat’: macroapi.c:25872:16: warning: variable ‘strand’ set but not used [-Wunused-but-set-variable] 25872 | Uint1 strand; | ^~~~~~ macroapi.c: In function ‘ApplyPartialBothSetActionToSeqFeat’: macroapi.c:25939:16: warning: variable ‘strand’ set but not used [-Wunused-but-set-variable] 25939 | Uint1 strand; | ^~~~~~ macroapi.c: In function ‘FindPosBeforeFeat’: macroapi.c:26236:15: warning: variable ‘regulator’ set but not used [-Wunused-but-set-variable] 26236 | SeqFeatPtr regulator = NULL, candidate; | ^~~~~~~~~ macroapi.c: In function ‘PerformAutofixInSeqEntry’: macroapi.c:29471:8: warning: unused variable ‘num_created’ [-Wunused-variable] 29471 | Int4 num_created = 0; | ^~~~~~~~~~~ macroapi.c: In function ‘AddFileDescriptors’: macroapi.c:29871:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 29871 | while (sdp = SeqDescAsnRead (aip, NULL)) { | ^~~ macroapi.c: In function ‘ApplyMacroToSeqEntryExEx’: macroapi.c:31907:28: warning: too many arguments for format [-Wformat-extra-args] 31907 | fprintf (log_fp, "Instantiated protein titles\n", num); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ macroapi.c: In function ‘PreprocessAddDescriptorListMacro’: macroapi.c:32020:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 32020 | while (sdp = SeqDescAsnRead (aip, NULL)) { | ^~~ macroapi.c: In function ‘FieldTypeFromString’: macroapi.c:32370:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 32370 | if (ft == NULL && StringsAreEquivalent(str, "location") || StringsAreEquivalent(str, "genome")) { | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ macroapi.c: In function ‘SummarizeRemoveOutsideAction’: macroapi.c:32939:11: warning: unused variable ‘case_insensitive’ [-Wunused-variable] 32939 | CharPtr case_insensitive = " (case insensitive)"; | ^~~~~~~~~~~~~~~~ macroapi.c: In function ‘GetObjectTableForTabTable’: macroapi.c:37508:63: warning: variable ‘last’ set but not used [-Wunused-but-set-variable] 37508 | ValNodePtr obj_table = NULL, obj_row, last_obj = NULL, tmp, last = NULL; | ^~~~ macroapi.c: In function ‘FormatMultipleDestinationErrorMessage’: macroapi.c:37987:21: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘Nlm_Int8’ {aka ‘long long int’} [-Wformat=] 37987 | sprintf (buf, "%d", vnp->data.intvalue + 1); | ~^ ~~~~~~~~~~~~~~~~~~~~~~ | | | | int Nlm_Int8 {aka long long int} | %lld macroapi.c: In function ‘CheckObjTableForExistingText’: macroapi.c:38084:14: warning: variable ‘entityID’ set but not used [-Wunused-but-set-variable] 38084 | Uint2 entityID; | ^~~~~~~~ macroapi.c: In function ‘FixSuspectProductNamesInEntrezGene’: macroapi.c:40352:18: warning: variable ‘prefix’ set but not used [-Wunused-but-set-variable] 40352 | CharPtr prefix = NULL; | ^~~~~~ In file included from ../include/tax3api.h:51, from macroapi.c:67: ../include/objtax3.h: At top level: ../include/objtax3.h:183:31: warning: ‘Value_valueFree’ declared ‘static’ but never defined [-Wunused-function] 183 | static Value_valuePtr LIBCALL Value_valueFree PROTO ((Value_valuePtr )); | ^~~~~~~~~~~~~~~ ../include/objtax3.h:184:31: warning: ‘Value_valueAsnRead’ declared ‘static’ but never defined [-Wunused-function] 184 | static Value_valuePtr LIBCALL Value_valueAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~ ../include/objtax3.h:185:24: warning: ‘Value_valueAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 185 | static Boolean LIBCALL Value_valueAsnWrite PROTO (( Value_valuePtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~ macroapi.c:37233:16: warning: ‘IsFieldTypeProteinDesc’ defined but not used [-Wunused-function] 37233 | static Boolean IsFieldTypeProteinDesc (FieldTypePtr ft) | ^~~~~~~~~~~~~~~~~~~~~~ macroapi.c:27097:13: warning: ‘GetDescriptorTypeFromDescriptorChoice’ defined but not used [-Wunused-function] 27097 | static Int4 GetDescriptorTypeFromDescriptorChoice (Uint1 descriptor_choice) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ macroapi.c:21298:13: warning: ‘GetFieldsFromAECR’ defined but not used [-Wunused-function] 21298 | static void GetFieldsFromAECR (AECRActionPtr act, FieldTypePtr PNTR pField, ValNodePtr PNTR pFieldPair) | ^~~~~~~~~~~~~~~~~ macroapi.c:20787:16: warning: ‘NoFieldChange’ defined but not used [-Wunused-function] 20787 | static Boolean NoFieldChange (CharPtr new_val, ValNodePtr vnp, FieldTypePtr field_from, StringConstraintPtr scp, BatchExtraPtr batch_extra) | ^~~~~~~~~~~~~ macroapi.c:16014:13: warning: ‘InitBatchExtraForAECRActionAndObjectList’ defined but not used [-Wunused-function] 16014 | static void InitBatchExtraForAECRActionAndObjectList (BatchExtraPtr batch_extra, AECRActionPtr action, ValNodePtr object_list) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ macroapi.c:10389:16: warning: ‘HasMultiplePrimerSets’ defined but not used [-Wunused-function] 10389 | static Boolean HasMultiplePrimerSets (CharPtr value) | ^~~~~~~~~~~~~~~~~~~~~ macroapi.c:5482:16: warning: ‘DoesLocationMatchConstraint’ defined but not used [-Wunused-function] 5482 | static Boolean DoesLocationMatchConstraint (SeqLocPtr slp, LocationConstraintPtr lcp) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ macroapi.c:4590:13: warning: ‘TestAdvancedStringMatch’ defined but not used [-Wunused-function] 4590 | static void TestAdvancedStringMatch (void) | ^~~~~~~~~~~~~~~~~~~~~~~ macroapi.c:2806:13: warning: ‘OriginFromOriginName’ defined but not used [-Wunused-function] 2806 | static Int4 OriginFromOriginName (CharPtr origin_name) | ^~~~~~~~~~~~~~~~~~~~ macroapi.c:1200:16: warning: ‘IsObjectAppropriateForFieldPair’ defined but not used [-Wunused-function] 1200 | static Boolean IsObjectAppropriateForFieldPair (Uint1 choice, Pointer data, FieldPairTypePtr fieldpair) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘ReadNameFromString’, inlined from ‘ReadNameListFromString’ at macroapi.c:14060:9: macroapi.c:14037:14: warning: ‘ch_r1’ may be used uninitialized [-Wmaybe-uninitialized] 14037 | *p_repl1 = ch_r1; | ~~~~~~~~~^~~~~~~ macroapi.c: In function ‘ReadNameListFromString’: macroapi.c:13946:11: note: ‘ch_r1’ was declared here 13946 | Char ch_r1, ch_r2, ch_r3; | ^~~~~ macroapi.c: In function ‘AlsoChangeMrnaForObject’: macroapi.c:20637:10: warning: ‘mrna’ may be used uninitialized [-Wmaybe-uninitialized] 20637 | if (mrna != NULL) { | ^ macroapi.c:20618:19: note: ‘mrna’ was declared here 20618 | SeqFeatPtr sfp, mrna, cds; | ^~~~ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from ../include/ncbilcl.h:154: In function ‘fprintf’, inlined from ‘ApplyMacroToSeqEntryExEx’ at macroapi.c:31907:11: /usr/arm-linux-gnueabi/include/bits/stdio2.h:79:10: warning: ‘num’ may be used uninitialized [-Wmaybe-uninitialized] 79 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ macroapi.c: In function ‘ApplyMacroToSeqEntryExEx’: macroapi.c:31469:37: note: ‘num’ was declared here 31469 | Int4 num_AECR = 0, num_parse = 0, num; | ^~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF salpedit.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from salpedit.c:2: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ salpedit.c: In function ‘SeqAlignInsert’: salpedit.c:162:19: warning: variable ‘ssp’ set but not used [-Wunused-but-set-variable] 162 | StdSegPtr ssp; | ^~~ salpedit.c:161:22: warning: variable ‘ddp’ set but not used [-Wunused-but-set-variable] 161 | DenseDiagPtr ddp; | ^~~ salpedit.c: At top level: salpedit.c:4120:18: warning: ‘build_slp_for_gcontig’ defined but not used [-Wunused-function] 4120 | static SeqLocPtr build_slp_for_gcontig (BioseqPtr gcontig_bsp, SeqIdPtr gcontig_sip) | ^~~~~~~~~~~~~~~~~~~~~ salpedit.c:4073:17: warning: ‘get_best_id’ defined but not used [-Wunused-function] 4073 | static SeqIdPtr get_best_id(BioseqPtr bsp) | ^~~~~~~~~~~ salpedit.c:4046:16: warning: ‘second_seq_has_gap’ defined but not used [-Wunused-function] 4046 | static Boolean second_seq_has_gap(BioseqPtr s_bsp) | ^~~~~~~~~~~~~~~~~~ salpedit.c:4016:18: warning: ‘dup_mul_locs’ defined but not used [-Wunused-function] 4016 | static SeqLocPtr dup_mul_locs(SeqLocPtr slp) | ^~~~~~~~~~~~ salpedit.c:3968:18: warning: ‘create_fake_bioseq’ defined but not used [-Wunused-function] 3968 | static BioseqPtr create_fake_bioseq(SeqLocPtr seq_loc, CharPtr fake_name) | ^~~~~~~~~~~~~~~~~~ salpedit.c:3937:13: warning: ‘reverse_seqloc’ defined but not used [-Wunused-function] 3937 | static void reverse_seqloc (SeqLocPtr s_loc) | ^~~~~~~~~~~~~~ salpedit.c:3850:13: warning: ‘save_output’ defined but not used [-Wunused-function] 3850 | static void save_output (SeqIdPtr sip, CharPtr f_name, SeqAlignPtr align) | ^~~~~~~~~~~ salpedit.c:3836:13: warning: ‘get_align_list_len’ defined but not used [-Wunused-function] 3836 | static Int4 get_align_list_len(SeqAlignPtr align) | ^~~~~~~~~~~~~~~~~~ salpedit.c:2939:20: warning: ‘open_annot’ defined but not used [-Wunused-function] 2939 | static SeqAnnotPtr open_annot(CharPtr f_name) | ^~~~~~~~~~ salpedit.c:2835:13: warning: ‘SeqAnnotWrite’ defined but not used [-Wunused-function] 2835 | static void SeqAnnotWrite(SeqAlignPtr align) | ^~~~~~~~~~~~~ salpedit.c:2653:16: warning: ‘FigureAlignRange’ defined but not used [-Wunused-function] 2653 | static Boolean FigureAlignRange(SeqAlignPtr align, SeqLocPtr m_loc, SeqLocPtr s_loc) | ^~~~~~~~~~~~~~~~ salpedit.c:1665:16: warning: ‘free_diag_in_list’ defined but not used [-Wunused-function] 1665 | static Boolean free_diag_in_list(ValNodePtr ddp_list, DenseDiagPtr ddp) | ^~~~~~~~~~~~~~~~~ salpedit.c:1605:16: warning: ‘is_overlap’ defined but not used [-Wunused-function] 1605 | static Boolean is_overlap(BoolPtr status, Int4 from, Int4 len) | ^~~~~~~~~~ salpedit.c:1560:13: warning: ‘filter_wrong_orientation’ defined but not used [-Wunused-function] 1560 | static void filter_wrong_orientation (SeqAlignPtr align, Boolean same_orient) | ^~~~~~~~~~~~~~~~~~~~~~~~ salpedit.c:1479:16: warning: ‘filter_this_seg’ defined but not used [-Wunused-function] 1479 | static Boolean filter_this_seg (DenseDiagPtr curr, DenseDiagPtr PNTR h_list, Int2 order) | ^~~~~~~~~~~~~~~ salpedit.c:1422:16: warning: ‘convert_ddp_to_array’ defined but not used [-Wunused-function] 1422 | static Int4Ptr convert_ddp_to_array (ValNodePtr ddp_list, Uint1 strand, Int2 s_order, Int4Ptr p_num) | ^~~~~~~~~~~~~~~~~~~~ salpedit.c:1387:14: warning: ‘has_too_much_overlap’ defined but not used [-Wunused-function] 1387 | static Uint1 has_too_much_overlap (Int4 start_1, Int4 stop_1, Int4 start_2, Int4 stop_2) | ^~~~~~~~~~~~~~~~~~~~ salpedit.c:1281:13: warning: ‘attach_new_align’ defined but not used [-Wunused-function] 1281 | static void attach_new_align(SeqAlignPtr new_salp, SeqAlignPtr PNTR old) { | ^~~~~~~~~~~~~~~~ salpedit.c:1169:20: warning: ‘JZSeqAlignMerge’ defined but not used [-Wunused-function] 1169 | static SeqAlignPtr JZSeqAlignMerge(SeqAlignPtr f_align, SeqIdPtr from_id, Int4 from, Int4 to, Uint1 strand, SeqIdPtr to_id, Int4 pos, SeqAlignPtr t_align) | ^~~~~~~~~~~~~~~ salpedit.c:254:16: warning: ‘is_gap_segment’ defined but not used [-Wunused-function] 254 | static Boolean is_gap_segment(Int4Ptr c_starts, Int2 dim) | ^~~~~~~~~~~~~~ salpedit.c:158:20: warning: ‘SeqAlignInsert’ defined but not used [-Wunused-function] 158 | static SeqAlignPtr SeqAlignInsert(SeqIdPtr from_id, Int4 from, Int4 to, Uint1 strand, SeqIdPtr to_id, Int4 pos, SeqAlignPtr head, Boolean merge, Boolean add_insertion) | ^~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF salpstat.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from salpstat.c:34: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ salpstat.c: In function ‘DenseSegStats’: salpstat.c:310:10: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 310 | if(dsp && (((mmatches || mmismatches) && bsp_1 && bsp_2)) || !(mmatches || mmismatches)) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ salpstat.c: In function ‘SeqAlignScoreFix’: salpstat.c:162:27: warning: ‘sp_last’ may be used uninitialized [-Wmaybe-uninitialized] 162 | sp_last->next = (ScorePtr) MemNew(sizeof(Score)); salpstat.c:121:20: note: ‘sp_last’ was declared here 121 | ScorePtr sp=NULL,sp_last; | ^~~~~~~ salpstat.c: In function ‘DenseSegStats’: salpstat.c:345:23: warning: ‘spp_1’ may be used uninitialized [-Wmaybe-uninitialized] 345 | SeqPortSeek(spp_1,start_1,SEEK_SET); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ salpstat.c:307:14: note: ‘spp_1’ was declared here 307 | SeqPortPtr spp_1, spp_2; | ^~~~~ salpstat.c:352:23: warning: ‘spp_2’ may be used uninitialized [-Wmaybe-uninitialized] 352 | SeqPortSeek(spp_2,start_2,SEEK_SET); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ salpstat.c:307:21: note: ‘spp_2’ was declared here 307 | SeqPortPtr spp_1, spp_2; | ^~~~~ salpstat.c: In function ‘SeqAlignWindowScoreFN’: salpstat.c:2038:45: warning: ‘score’ may be used uninitialized [-Wmaybe-uninitialized] 2038 | residue_score[pos]=score; | ~~~~~~~~~~~~~~~~~~^~~~~~ salpstat.c:1915:8: note: ‘score’ was declared here 1915 | Int4 score,win_score,gap_score; | ^~~~~ salpstat.c: In function ‘SeqAlignWindowScore’: salpstat.c:2214:12: warning: ‘scoreptr’ may be used uninitialized [-Wmaybe-uninitialized] 2214 | return scoreptr; | ^~~~~~~~ salpstat.c:2142:16: note: ‘scoreptr’ was declared here 2142 | FloatHiPtr scoreptr; | ^~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF salpacc.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/salpacc.h:33, from salpacc.c:40: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ salpacc.c: In function ‘SeqAlignStrand’: salpacc.c:334:20: warning: unused variable ‘this_strand’ [-Wunused-variable] 334 | Uint1Ptr this_strand=Seq_strand_unknown; | ^~~~~~~~~~~ salpacc.c: In function ‘SeqAlignStop’: salpacc.c:561:13: warning: ‘this_stop’ may be used uninitialized [-Wmaybe-uninitialized] 561 | if(this_stop!=-1) | ^ salpacc.c:545:12: note: ‘this_stop’ was declared here 545 | Int4 this_stop; | ^~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF salprop.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/salsa.h:48, from ../include/salprop.h:46, from salprop.c:42: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ salprop.c: In function ‘CopySeqLocFromSeqAlign’: salprop.c:398:13: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 398 | else | ^~~~ salprop.c:401:16: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 401 | if(crp != NULL) /*for coding region features*/ | ^~ salprop.c:291:12: warning: variable ‘check_gap’ set but not used [-Wunused-but-set-variable] 291 | Boolean check_gap; | ^~~~~~~~~ salprop.c: In function ‘ApplyNewSeqFeat’: salprop.c:867:43: warning: the comparison will always evaluate as ‘true’ for the address of ‘label’ will never be NULL [-Waddress] 867 | if (af.protName==NULL && sesp->label) | ^~ ../include/salsa.h:171:20: note: ‘label’ declared here 171 | Char label[101]; | ^~~~~ salprop.c: In function ‘FeatListToProp’: salprop.c:1336:20: warning: variable ‘feat_itemID’ set but not used [-Wunused-but-set-variable] 1336 | Uint4 feat_itemID; | ^~~~~~~~~~~ In file included from ../include/sqnutils.h:51, from salprop.c:46: ../include/objentgene.h: At top level: ../include/objentgene.h:177:33: warning: ‘Method_methodFree’ declared ‘static’ but never defined [-Wunused-function] 177 | static Method_methodPtr LIBCALL Method_methodFree PROTO ((Method_methodPtr )); | ^~~~~~~~~~~~~~~~~ ../include/objentgene.h:178:33: warning: ‘Method_methodAsnRead’ declared ‘static’ but never defined [-Wunused-function] 178 | static Method_methodPtr LIBCALL Method_methodAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~ ../include/objentgene.h:179:24: warning: ‘Method_methodAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 179 | static Boolean LIBCALL Method_methodAsnWrite PROTO (( Method_methodPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~ ../include/salprop.h:50:16: warning: ‘GBFeat’ defined but not used [-Wunused-variable] 50 | static CharPtr GBFeat[number_GBFeat] = { | ^~~~~~ salprop.c: In function ‘ApplyNewSeqFeat’: salprop.c:861:40: warning: ‘entityID’ may be used uninitialized [-Wmaybe-uninitialized] 861 | if ((val2=is_id_unique (entityID, SeqLocId(sfp->product)))) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ salprop.c:785:20: note: ‘entityID’ was declared here 785 | Uint2 entityID; | ^~~~~~~~ In function ‘ApplyBioFeatToSeqEntry’, inlined from ‘ApplyNewSeqFeat’ at salprop.c:911:27: salprop.c:711:6: warning: ‘sfp’ may be used uninitialized [-Wmaybe-uninitialized] 711 | if (sfp != NULL) | ^ salprop.c: In function ‘ApplyNewSeqFeat’: salprop.c:674:17: note: ‘sfp’ was declared here 674 | SeqFeatPtr sfp; | ^~~ In function ‘CheckPartialInterval’, inlined from ‘ApplyBioFeatToSeqEntry’ at salprop.c:731:12, inlined from ‘ApplyNewSeqFeat’ at salprop.c:911:27: salprop.c:620:11: warning: ‘stop’ may be used uninitialized [-Wmaybe-uninitialized] 620 | j = stop - SeqLocStop(sfp_location); | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ salprop.c: In function ‘ApplyNewSeqFeat’: salprop.c:514:17: note: ‘stop’ was declared here 514 | stop, | ^~~~ In function ‘ApplyBioFeatToSeqEntry’, inlined from ‘ApplyNewSeqFeat’ at salprop.c:911:27: salprop.c:733:24: warning: ‘ppp.p5’ may be used uninitialized [-Wmaybe-uninitialized] 733 | if (!sfp_p5 && ppp.p5) | ~~~~~~~~^~~~~~~~~ salprop.c: In function ‘ApplyNewSeqFeat’: salprop.c:679:17: note: ‘ppp.p5’ was declared here 679 | ParTials ppp; | ^~~ In function ‘ApplyBioFeatToSeqEntry’, inlined from ‘ApplyNewSeqFeat’ at salprop.c:911:27: salprop.c:737:12: warning: ‘ppp.p3’ may be used uninitialized [-Wmaybe-uninitialized] 737 | SetSeqLocPartial (sfp->location, afp->noLeft, afp->noRight); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ salprop.c: In function ‘ApplyNewSeqFeat’: salprop.c:679:17: note: ‘ppp.p3’ was declared here 679 | ParTials ppp; | ^~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF salsap.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/salsa.h:48, from ../include/salsap.h:57, from salsap.c:44: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ salsap.c: In function ‘DenseDiagToDenseSegFunc’: salsap.c:2912:30: warning: variable ‘slpstop2’ set but not used [-Wunused-but-set-variable] 2912 | slpstop1 = 0, slpstop2 = 0; | ^~~~~~~~ salsap.c:2912:16: warning: variable ‘slpstop1’ set but not used [-Wunused-but-set-variable] 2912 | slpstop1 = 0, slpstop2 = 0; | ^~~~~~~~ salsap.c:2911:31: warning: variable ‘slpstart2’ set but not used [-Wunused-but-set-variable] 2911 | Int4 slpstart1 = 0, slpstart2 = 0, | ^~~~~~~~~ salsap.c:2911:16: warning: variable ‘slpstart1’ set but not used [-Wunused-but-set-variable] 2911 | Int4 slpstart1 = 0, slpstart2 = 0, | ^~~~~~~~~ salsap.c:2909:28: warning: variable ‘start2’ set but not used [-Wunused-but-set-variable] 2909 | Int4 start1 = 0, start2 = 0, | ^~~~~~ salsap.c:2909:16: warning: variable ‘start1’ set but not used [-Wunused-but-set-variable] 2909 | Int4 start1 = 0, start2 = 0, | ^~~~~~ In file included from ../include/sqnutils.h:51, from salsap.c:47: ../include/objentgene.h: At top level: ../include/objentgene.h:177:33: warning: ‘Method_methodFree’ declared ‘static’ but never defined [-Wunused-function] 177 | static Method_methodPtr LIBCALL Method_methodFree PROTO ((Method_methodPtr )); | ^~~~~~~~~~~~~~~~~ ../include/objentgene.h:178:33: warning: ‘Method_methodAsnRead’ declared ‘static’ but never defined [-Wunused-function] 178 | static Method_methodPtr LIBCALL Method_methodAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~ ../include/objentgene.h:179:24: warning: ‘Method_methodAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 179 | static Boolean LIBCALL Method_methodAsnWrite PROTO (( Method_methodPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~ salsap.c:3631:13: warning: ‘FindSeqAlignCallback’ defined but not used [-Wunused-function] 3631 | static void FindSeqAlignCallback (SeqEntryPtr sep, Pointer mydata, | ^~~~~~~~~~~~~~~~~~~~ salsap.c:2157:16: warning: ‘AreDenseSegSegmentsValid’ defined but not used [-Wunused-function] 2157 | static Boolean AreDenseSegSegmentsValid (DenseSegPtr dsp, Int4 start, Int4 num) | ^~~~~~~~~~~~~~~~~~~~~~~~ salsap.c: In function ‘CleanStrandsSeqAlign’: salsap.c:1610:15: warning: ‘lenp’ may be used uninitialized [-Wmaybe-uninitialized] 1610 | Int4Ptr lenp; | ^~~~ salsap.c:1611:15: warning: ‘startp’ may be used uninitialized [-Wmaybe-uninitialized] 1611 | Int4Ptr startp; | ^~~~~~ salsap.c:1662:29: warning: ‘numseg’ may be used uninitialized [-Wmaybe-uninitialized] 1662 | for (j=0; j < numseg*dim && strandp!=NULL; j++, strandp++) | ~~~~~~^~~~ salsap.c:1613:15: note: ‘numseg’ was declared here 1613 | Int4 numseg; | ^~~~~~ salsap.c:1639:27: warning: ‘dim’ may be used uninitialized [-Wmaybe-uninitialized] 1639 | for (j=0; j>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF salstruc.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/salsa.h:48, from ../include/salstruc.h:56, from salstruc.c:33: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ salstruc.c: In function ‘prot_to_rputprot’: salstruc.c:734:18: warning: comparison between pointer and zero character constant [-Wpointer-compare] 734 | if (strptmp == '\0') break; | ^~ salstruc.c:734:10: note: did you mean to dereference the pointer? 734 | if (strptmp == '\0') break; | ^ salstruc.c: In function ‘data_collect_arrange’: salstruc.c:1338:22: warning: variable ‘maxscroll’ set but not used [-Wunused-but-set-variable] 1338 | Int4 maxscroll; | ^~~~~~~~~ salstruc.c: In function ‘slpfeatcollfunc’: salstruc.c:1999:21: warning: the comparison will always evaluate as ‘false’ for the address of ‘features’ will never be NULL [-Waddress] 1999 | if(csop->features == NULL) | ^~ In file included from ../include/txalign.h:228, from ../include/salstruc.h:57: ../include/jzcoll.h:206:17: note: ‘features’ declared here 206 | Boolean features[FEATDEF_ANY]; /*for filtering unwanted features*/ | ^~~~~~~~ salstruc.c: In function ‘ShowAlignmentText’: salstruc.c:2203:29: warning: variable ‘itemtype’ set but not used [-Wunused-but-set-variable] 2203 | Uint2 entityID, itemtype; | ^~~~~~~~ In file included from ../include/sqnutils.h:51, from salstruc.c:40: ../include/objentgene.h: At top level: ../include/objentgene.h:177:33: warning: ‘Method_methodFree’ declared ‘static’ but never defined [-Wunused-function] 177 | static Method_methodPtr LIBCALL Method_methodFree PROTO ((Method_methodPtr )); | ^~~~~~~~~~~~~~~~~ ../include/objentgene.h:178:33: warning: ‘Method_methodAsnRead’ declared ‘static’ but never defined [-Wunused-function] 178 | static Method_methodPtr LIBCALL Method_methodAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~ ../include/objentgene.h:179:24: warning: ‘Method_methodAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 179 | static Boolean LIBCALL Method_methodAsnWrite PROTO (( Method_methodPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~ In file included from ../include/samutil.h:234, from ../include/alignmgr2.h:114, from salstruc.c:41: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ salstruc.c: In function ‘prot_to_rputprot’: salstruc.c:707:11: warning: ‘j’ may be used uninitialized [-Wmaybe-uninitialized] 707 | Int4 j, k; | ^ In function ‘update_fromalignnode’, inlined from ‘data_collect_arrange’ at salstruc.c:1363:13: salstruc.c:1064:46: warning: ‘entityID’ may be used uninitialized [-Wmaybe-uninitialized] 1064 | adp->caret.entityID = entityID; | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ salstruc.c: In function ‘data_collect_arrange’: salstruc.c:1005:17: note: ‘entityID’ was declared here 1005 | Uint2 entityID; | ^~~~~~~~ In function ‘arrange_buffer’, inlined from ‘data_collect_arrange’ at salstruc.c:1433:6: salstruc.c:918:52: warning: ‘entityID’ may be used uninitialized [-Wmaybe-uninitialized] 918 | if (OBJ_(tdp->feattype) == OBJ_BIOSEQ && (is_seqvisible(entityID, itemID, adp->seq_info)) ) | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ salstruc.c: In function ‘data_collect_arrange’: salstruc.c:872:19: note: ‘entityID’ was declared here 872 | Uint2 entityID; | ^~~~~~~~ salstruc.c: In function ‘ShowAlignmentText’: salstruc.c:2258:16: warning: ‘bspsip’ may be used uninitialized [-Wmaybe-uninitialized] 2258 | print_line (fout, tdp->label, bufstr, leftmargin, adp->columnpcell, bspsip, html_option, FALSE); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ salstruc.c:2194:19: note: ‘bspsip’ was declared here 2194 | SeqIdPtr bspsip; | ^~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF salutil.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from salutil.c:45: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ salutil.c: In function ‘ReadBufferFromSap’: salutil.c:129:24: warning: variable ‘buffstart’ set but not used [-Wunused-but-set-variable] 129 | Int4 bufflen, buffstart; | ^~~~~~~~~ salutil.c:128:15: warning: variable ‘sumstart’ set but not used [-Wunused-but-set-variable] 128 | Int4 sumstart; | ^~~~~~~~ salutil.c: In function ‘IS_protSeqLoc’: salutil.c:595:11: warning: variable ‘seq’ set but not used [-Wunused-but-set-variable] 595 | CharPtr seq; | ^~~ salutil.c: In function ‘ReplaceSeqIdWithSeqId’: salutil.c:1237:20: warning: variable ‘oldscope’ set but not used [-Wunused-but-set-variable] 1237 | SeqEntryPtr oldscope; | ^~~~~~~~ salutil.c: In function ‘del_ssp_fromid’: salutil.c:1723:24: warning: variable ‘pressp’ set but not used [-Wunused-but-set-variable] 1723 | SelEdStructPtr ssp, pressp = NULL; | ^~~~~~ salutil.c: In function ‘checkCDSselect_forprotein’: salutil.c:2511:12: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 2511 | if (feat != NULL) | ^ In file included from ../include/sqnutils.h:51, from salutil.c:53: ../include/objentgene.h: At top level: ../include/objentgene.h:177:33: warning: ‘Method_methodFree’ declared ‘static’ but never defined [-Wunused-function] 177 | static Method_methodPtr LIBCALL Method_methodFree PROTO ((Method_methodPtr )); | ^~~~~~~~~~~~~~~~~ ../include/objentgene.h:178:33: warning: ‘Method_methodAsnRead’ declared ‘static’ but never defined [-Wunused-function] 178 | static Method_methodPtr LIBCALL Method_methodAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~ ../include/objentgene.h:179:24: warning: ‘Method_methodAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 179 | static Boolean LIBCALL Method_methodAsnWrite PROTO (( Method_methodPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~ In file included from ../include/samutil.h:234, from ../include/alignmgr2.h:114, from salutil.c:54: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ salutil.c: In function ‘sesp_to_slp’: salutil.c:1975:14: warning: ‘j’ may be used uninitialized [-Wmaybe-uninitialized] 1975 | while (j>0) { | ~^~ salutil.c:1928:18: note: ‘j’ was declared here 1928 | Int2 j,k; | ^ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF udvseq.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objsset.h:48, from ../include/explore.h:49, from ../include/udvseq.h:100, from udvseq.c:112: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ udvseq.c: In function ‘UDV_EncodeIdxFeat’: udvseq.c:448:18: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 448 | return *((Int4Ptr) index_g); | ~^~~~~~~~~~~~~~~~~~ udvseq.c: In function ‘UDV_BigEncodeIdxFeat’: udvseq.c:473:18: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 473 | return *((Uint8Ptr) index_g); | ~^~~~~~~~~~~~~~~~~~~ udvseq.c: In function ‘UDV_EncodeIdxFeat’: udvseq.c:448:16: warning: ‘index_g’ is used uninitialized [-Wuninitialized] 448 | return *((Int4Ptr) index_g); | ^~~~~~~~~~~~~~~~~~~~ udvseq.c:443:7: note: ‘index_g’ declared here 443 | Uint2 index_g[2]; | ^~~~~~~ udvseq.c: In function ‘UDV_BigEncodeIdxFeat’: udvseq.c:473:16: warning: ‘index_g’ is used uninitialized [-Wuninitialized] 473 | return *((Uint8Ptr) index_g); | ^~~~~~~~~~~~~~~~~~~~~ udvseq.c:466:7: note: ‘index_g’ declared here 466 | Uint2 index_g[4]; | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF blocks.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/blocks.h:88, from blocks.c:93: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ blocks.c: In function ‘IndexBlocks’: blocks.c:928:19: warning: operation on ‘segp_align->to’ may be undefined [-Wsequence-point] 928 | segp_align->to = segp_align->to = -1; | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ blocks.c: In function ‘IndexNewBlocks’: blocks.c:1084:19: warning: operation on ‘segp_align->to’ may be undefined [-Wsequence-point] 1084 | segp_align->to = segp_align->to = -1; | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ blocks.c: In function ‘GetBlockOrientation’: blocks.c:2383:11: warning: ‘orient’ may be used uninitialized [-Wmaybe-uninitialized] 2383 | return orient; | ^~~~~~ blocks.c:2259:10: note: ‘orient’ was declared here 2259 | Int4 orient; | ^~~~~~ blocks.c: In function ‘SAMergeBlocks’: blocks.c:2071:27: warning: ‘tmp_curr’ may be used uninitialized [-Wmaybe-uninitialized] 2071 | tmp2->prev = tmp_curr; | ~~~~~~~~~~~^~~~~~~~~~ blocks.c:1317:16: note: ‘tmp_curr’ was declared here 1317 | SegmentPtr tmp_curr; | ^~~~~~~~ blocks.c:1882:34: warning: ‘tmp_head’ may be used uninitialized [-Wmaybe-uninitialized] 1882 | tmp_head->next = tmp_curr; | ~~~~~~~~~~~~~~~^~~~~~~~~~ blocks.c:1318:16: note: ‘tmp_head’ was declared here 1318 | SegmentPtr tmp_head; | ^~~~~~~~ blocks.c:1709:27: warning: ‘prev’ may be used uninitialized [-Wmaybe-uninitialized] 1709 | tmp1->prev = prev; | ~~~~~~~~~~~^~~~~~ blocks.c:1311:16: note: ‘prev’ was declared here 1311 | SegmentPtr prev; | ^~~~ blocks.c:1638:29: warning: ‘new_sabp1’ may be used uninitialized [-Wmaybe-uninitialized] 1638 | new_sabp1->prev = merged; | ~~~~~~~~~~~~~~~~^~~~~~~~ blocks.c:1307:16: note: ‘new_sabp1’ was declared here 1307 | SABlockPtr new_sabp1; | ^~~~~~~~~ blocks.c:2162:30: warning: ‘tmp2’ may be used uninitialized [-Wmaybe-uninitialized] 2162 | tmp2->prev = tmp_curr; | ~~~~~~~~~~~^~~~~~~~~~ blocks.c:1320:16: note: ‘tmp2’ was declared here 1320 | SegmentPtr tmp2; | ^~~~ blocks.c: In function ‘SASplitBlock’: blocks.c:2796:25: warning: ‘segp2_prev’ may be used uninitialized [-Wmaybe-uninitialized] 2796 | segp2->prev = segp2_prev; | ~~~~~~~~~~~~^~~~~~~~~~~~ blocks.c:2765:16: note: ‘segp2_prev’ was declared here 2765 | SegmentPtr segp2_prev; | ^~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF pgppop.c pgppop.c:58:2: warning: missing braces around initializer [-Wmissing-braces] 58 | { | ^ 59 | /* Red Grn Blue Color ColorID Old Hex New Hex */ 60 | 255, 255, 255, /* default 0 0xffffff - */ | { } 61 | 255, 00, 153, /* hotpink 1 0xff1493 0xff0099 */ | { } 62 | 255, 0, 255, /* magenta 2 0xff00ff - */ | { } 63 | 153, 51, 255, /* purple 3 0x9b30ff 0x9933ff */ | { } 64 | 0, 0, 255, /* blue 4 0x0000ff - */ | { } 65 | 00, 153, 255, /* sky 5 0x1e90ff 0x0099ff */ | { } 66 | 0, 255, 255, /* cyan 6 0x00ffff - */ | { } 67 | 0, 255, 153, /* sea 7 0x00ff8f 0x00ff99 */ | { } 68 | 0, 255, 0, /* green 8 0x00ff00 - */ | { } 69 | 255, 255, 0, /* yellow 9 0xffff00 - */ | { } 70 | 255, 204, 0, /* gold 10 0xffa500 0xffcc00 */ | { } 71 | 255, 102, 0, /* orange 11 0xff4500 0xff6600 */ | { } 72 | 255, 0, 0, /* red 12 0xff0000 - */ | { } 73 | 255, 153, 153, /* pink 13 0xff7256 0xff9999 */ | { } 74 | 255, 204, 204, /* pinktint 14 0xffaeb9 0xffcccc */ | { } 75 | 255, 255, 255, /* white 15 0xffffff -*/ | { } 76 | 0, 0, 0, /* black 16 0x000000 - */ | { } 77 | 204, 204, 255, /* bluetint 17 0xb0e2ff - 0xccccff*/ | { } 78 | 153, 255, 153, /* greentint 18 0x9aff9a - 0x99ff99 */ | { } 79 | 255, 255, 153, /* yellowtint 19 0xffec8b - 0xffff99 */ | { } 80 | 102, 102, 102, /* gray 20 0x7d7d7d 0x666666 */ | { } 81 | 153, 102, 51, /* brown 21 0x8b5742 01x996633 */ | { } 82 | 255, 0, 0, /* perm colors 22: red 0xff0000 - */ | { } 83 | 0, 255, 0, /* perm colors 23: green 0x00ff00 - */ | { } 84 | 255, 0, 255, /* perm colors 24: magenta 0xff00ff - */ | { } 85 | 00, 153, 255, /* perm colors 25: sky 0x1e90ff 0x0099ff */ | { } 86 | 153, 51, 255, /* perm colors 26: purple 0x9b30ff 0x9933ff */ | { } 87 | 0, 255, 0, /* SS colors 27: helix, green 0x00ff00 - */ | { } 88 | 255, 204, 0, /* SS colors 28: strand, gold 0xffa500 0xffcc00 */ | { } 89 | 255, 102, 0, /* SS colors 29: turn, orange 0xff4500 0xff6600 */ | { } 90 | 0, 255, 255, /* SS colors 30: coil, cyan ox00ffff - */ | { } 91 | 255, 255, 0, /* highlight colors 31: yellow 0xffff00 - */ | { } 92 | 0, 0, 0 /* background colors 32: black 0x000000 - */ | { 93 | }; | } pgppop.c: In function ‘DDV_WWW_get_CDS_minus’: pgppop.c:329:9: warning: variable ‘bGiForProductOk’ set but not used [-Wunused-but-set-variable] 329 | Boolean bGiForProductOk=FALSE; | ^~~~~~~~~~~~~~~ pgppop.c:327:33: warning: variable ‘numivals2’ set but not used [-Wunused-but-set-variable] 327 | numivals2=0; | ^~~~~~~~~ pgppop.c: In function ‘DDV_WWW_get_CDS_plus’: pgppop.c:451:9: warning: variable ‘bGiForProductOk’ set but not used [-Wunused-but-set-variable] 451 | Boolean bGiForProductOk=FALSE; | ^~~~~~~~~~~~~~~ pgppop.c: In function ‘DDV_DisplayTopScale’: pgppop.c:1300:9: warning: unused variable ‘szBlank’ [-Wunused-variable] 1300 | Char szBlank[TABLE_LEFT_MARGIN+5]={""}; | ^~~~~~~ pgppop.c: In function ‘DDV_GetBLASTCompLine_1’: pgppop.c:1736:31: warning: array subscript has type ‘char’ [-Wchar-subscripts] 1736 | if (matrix[s][q]>0){ | ^ pgppop.c:1736:34: warning: array subscript has type ‘char’ [-Wchar-subscripts] 1736 | if (matrix[s][q]>0){ | ^ pgppop.c: In function ‘DDV_DisplayDefaultAlign’: pgppop.c:3169:25: warning: unused variable ‘sabp’ [-Wunused-variable] 3169 | SABlockPtr sabp=NULL;/*indexed SeqAlign*/ | ^~~~ pgppop.c: In function ‘DDV_ShowSeqAlign’: pgppop.c:3512:10: warning: unused variable ‘szPopSetAuth’ [-Wunused-variable] 3512 | Char szPopSetAuth[INFO_SIZE+1]={""}; | ^~~~~~~~~~~~ pgppop.c:3510:10: warning: unused variable ‘szPopSetName’ [-Wunused-variable] 3510 | Char szPopSetName[INFO_SIZE+1]={""};/*article title of the Pop-Set*/ | ^~~~~~~~~~~~ pgppop.c: In function ‘DDV_PrintPopSetSummary’: pgppop.c:3683:9: warning: variable ‘bPairwise’ set but not used [-Wunused-but-set-variable] 3683 | Boolean bPairwise=TRUE,bPrintTax,bPrintCom; | ^~~~~~~~~ In file included from ../include/sqnutils.h:51, from pgppop.c:49: ../include/objentgene.h: At top level: ../include/objentgene.h:177:33: warning: ‘Method_methodFree’ declared ‘static’ but never defined [-Wunused-function] 177 | static Method_methodPtr LIBCALL Method_methodFree PROTO ((Method_methodPtr )); | ^~~~~~~~~~~~~~~~~ ../include/objentgene.h:178:33: warning: ‘Method_methodAsnRead’ declared ‘static’ but never defined [-Wunused-function] 178 | static Method_methodPtr LIBCALL Method_methodAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~ ../include/objentgene.h:179:24: warning: ‘Method_methodAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 179 | static Boolean LIBCALL Method_methodAsnWrite PROTO (( Method_methodPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~ In file included from ../include/samutil.h:234, from ../include/alignmgr.h:266, from ../include/ddvcreate.h:143, from pgppop.c:54: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ pgppop.c:2664:13: warning: ‘DDV_PrintFastaGappedSequence’ defined but not used [-Wunused-function] 2664 | static void DDV_PrintFastaGappedSequence(CharPtr szSequence,FILE *fp) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ pgppop.c:2617:13: warning: ‘DDV_GetGappedSequence’ defined but not used [-Wunused-function] 2617 | static void DDV_GetGappedSequence(SegmentPtr segp,CharPtr szSequence, | ^~~~~~~~~~~~~~~~~~~~~ pgppop.c:1841:13: warning: ‘DDV_HideMaskedLetters’ defined but not used [-Wunused-function] 1841 | static void DDV_HideMaskedLetters(CharPtr szSeqMaster,ParaGPtr pgp,ValNodePtr mask) | ^~~~~~~~~~~~~~~~~~~~~ pgppop.c:314:13: warning: ‘DDV_WWW_get_CDS_minus’ defined but not used [-Wunused-function] 314 | static void DDV_WWW_get_CDS_minus(SeqMgrFeatContextPtr context,Int4 start, | ^~~~~~~~~~~~~~~~~~~~~ In file included from ../include/asn2ff6.h:142, from pgppop.c:51: ../include/asnprt.h:61:21: warning: ‘amp’ defined but not used [-Wunused-variable] 61 | static AsnModulePtr amp = ampx; | ^~~ ../include/asnprt.h:60:19: warning: ‘at’ defined but not used [-Wunused-variable] 60 | static AsnTypePtr at = atx; | ^~ ../include/asnprt.h:59:23: warning: ‘avn’ defined but not used [-Wunused-variable] 59 | static AsnValxNodePtr avn = NULL; | ^~~ ../include/asnprt.h:12:15: warning: ‘asnfilename’ defined but not used [-Wunused-variable] 12 | static char * asnfilename = "asnprt.h60"; | ^~~~~~~~~~~ pgppop.c: In function ‘DDV_GetPubValues’: pgppop.c:2873:34: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2873 | sprintf(szBuf,"%d",year); | ^ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from pgppop.c:41: In function ‘sprintf’, inlined from ‘DDV_GetPubValues’ at pgppop.c:2873:3: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 7 bytes into a destination of size 6 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ pgppop.c: In function ‘DDV_PopDisplay2’: pgppop.c:997:36: warning: ‘pgp2’ may be used uninitialized [-Wmaybe-uninitialized] 997 | if (pgp2 && ((pgp2->StopLetter-pgp2->StartLetter+1)>=AbsLengthAli)) { | ^ pgppop.c:776:15: note: ‘pgp2’ was declared here 776 | ParaGPtr pgp1,pgp2;/*used to create new ParaGs*/ | ^~~~ pgppop.c:1004:42: warning: ‘vnp’ may be used uninitialized [-Wmaybe-uninitialized] 1004 | vnp->next=NULL; | ^ pgppop.c:774:17: note: ‘vnp’ was declared here 774 | ValNodePtr vnp,vnp2;/*used to delete additional ParaG nodes, if needed; | ^~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF samutil.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbistd.h:61, from ../include/samutil.h:230, from samutil.c:42: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ samutil.c: In function ‘SAM_AlignIdComp’: samutil.c:796:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 796 | if ((a == NULL) || (b == NULL)) | ^~ samutil.c:799:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 799 | choice = a->choice; | ^~~~~~ samutil.c: In function ‘SAM_AlignIdDup’: samutil.c:852:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 852 | if (oldid == NULL) | ^~ samutil.c:855:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 855 | newid = ValNodeNew(NULL); | ^~~~~ samutil.c: In function ‘DDE_FreeStack’: samutil.c:1556:11: warning: operation on ‘Index’ may be undefined [-Wsequence-point] 1556 | Index = ++Index % DDE_STACK_SIZE; samutil.c: In function ‘DDE_Add’: samutil.c:1611:22: warning: operation on ‘pStack->StackMin’ may be undefined [-Wsequence-point] 1611 | pStack->StackMin = ++pStack->StackMin % DDE_STACK_SIZE; samutil.c:1622:22: warning: operation on ‘pStack->StackIndex’ may be undefined [-Wsequence-point] 1622 | pStack->StackIndex = ++pStack->StackIndex % DDE_STACK_SIZE; samutil.c: In function ‘DDE_Prev’: samutil.c:1686:22: warning: operation on ‘pStack->StackIndex’ may be undefined [-Wsequence-point] 1686 | pStack->StackIndex = ++pStack->StackIndex % DDE_STACK_SIZE; samutil.c: In function ‘DDE_Next’: samutil.c:1717:22: warning: operation on ‘pStack->StackIndex’ may be undefined [-Wsequence-point] 1717 | pStack->StackIndex = ++pStack->StackIndex % DDE_STACK_SIZE; samutil.c: In function ‘DDE_ShowRow’: samutil.c:1984:26: warning: variable ‘NumRows’ set but not used [-Wunused-but-set-variable] 1984 | Int4 i, NumRows, HiRow, LowRow, tmp1, tmp2; | ^~~~~~~ samutil.c: In function ‘DDE_AddGapToEndOfAllRows’: samutil.c:3106:41: warning: variable ‘vnp’ set but not used [-Wunused-but-set-variable] 3106 | ValNodePtr ptxtList, last_vnp, vnp; | ^~~ samutil.c: In function ‘DDE_RightAddNode’: samutil.c:3707:33: warning: variable ‘new_vnp’ set but not used [-Wunused-but-set-variable] 3707 | ValNodePtr vnp, next_vnp, new_vnp; | ^~~~~~~ samutil.c: In function ‘DDE_LeftMergeAndAddNodeList’: samutil.c:3757:24: warning: variable ‘RetVal2’ set but not used [-Wunused-but-set-variable] 3757 | Boolean RetVal1, RetVal2, IsLeftAlignedGap, NodeDeleted; | ^~~~~~~ samutil.c: In function ‘DDE_RightMergeAndAddNodeList’: samutil.c:3813:38: warning: variable ‘RetVal2’ set but not used [-Wunused-but-set-variable] 3813 | Boolean RetVal=FALSE, RetVal1, RetVal2, HeadChanged; | ^~~~~~~ samutil.c: In function ‘DDE_ShiftRightBoundaryLeft1’: samutil.c:4592:41: warning: variable ‘Index’ set but not used [-Wunused-but-set-variable] 4592 | Int4 NumBlocks, i, NumRows, Index, BlockCount=0; | ^~~~~ samutil.c: In function ‘DDE_CreateArraysForDenseSeg’: samutil.c:5028:22: warning: variable ‘NumSegs’ set but not used [-Wunused-but-set-variable] 5028 | Int4 NumRows, NumSegs, i, StartIndex, StopIndex, ArrayIndex=0; | ^~~~~~~ samutil.c: In function ‘DDE_GetLastVNP’: samutil.c:3143:9: warning: ‘last_vnp’ may be used uninitialized [-Wmaybe-uninitialized] 3143 | return(last_vnp); | ^ samutil.c:3137:15: note: ‘last_vnp’ was declared here 3137 | ValNodePtr last_vnp; | ^~~~~~~~ samutil.c: In function ‘DDE_GetNumResidues’: samutil.c:3166:13: warning: ‘to’ may be used uninitialized [-Wmaybe-uninitialized] 3166 | return((to-from) + 1); | ~~~^~~~~~ samutil.c:3153:27: note: ‘to’ was declared here 3153 | Int4 from=-1, to; | ^~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ddvcolor.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ddvcolor.c:160: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ddvcolor.c: In function ‘DDV_GetColor’: ddvcolor.c:1422:10: warning: unused variable ‘retval’ [-Wunused-variable] 1422 | Int4 retval = 0; | ^~~~~~ In file included from ../include/samutil.h:234, from ddvcolor.c:165: ../include/objalignloc.h: At top level: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF viewmgr.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/viewmgr.h:111, from viewmgr.c:165: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from ../include/samutil.h:234, from ../include/alignmgr.h:266, from viewmgr.c:167: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ In file included from ../include/sqnutils.h:51, from viewmgr.c:168: ../include/objentgene.h:177:33: warning: ‘Method_methodFree’ declared ‘static’ but never defined [-Wunused-function] 177 | static Method_methodPtr LIBCALL Method_methodFree PROTO ((Method_methodPtr )); | ^~~~~~~~~~~~~~~~~ ../include/objentgene.h:178:33: warning: ‘Method_methodAsnRead’ declared ‘static’ but never defined [-Wunused-function] 178 | static Method_methodPtr LIBCALL Method_methodAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~ ../include/objentgene.h:179:24: warning: ‘Method_methodAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 179 | static Boolean LIBCALL Method_methodAsnWrite PROTO (( Method_methodPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~ viewmgr.c:683:13: warning: ‘ViewMgr_Swap’ defined but not used [-Wunused-function] 683 | static void ViewMgr_Swap(SeqAlign *salp1, SeqAlign *salp2) | ^~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ddvcreate.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/ddvcreate.h:142, from ddvcreate.c:245: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ddvcreate.c:290:2: warning: missing braces around initializer [-Wmissing-braces] 290 | { | ^ 291 | /* Red Grn Blue Color ColorID Old Hex New Hex */ 292 | 255, 255, 255, /* default 0 0xffffff - */ | { } 293 | 255, 0, 153, /* hotpink 1 0xff1493 0xff0099 */ | { } 294 | 255, 0, 255, /* magenta 2 0xff00ff - */ | { } 295 | 153, 51, 255, /* purple 3 0x9b30ff 0x9933ff */ | { } 296 | 0, 0, 255, /* blue 4 0x0000ff - */ | { } 297 | 00, 153, 255, /* sky 5 0x1e90ff 0x0099ff */ | { } 298 | 0, 255, 255, /* cyan 6 0x00ffff - */ | { } 299 | 0, 255, 153, /* sea 7 0x00ff8f 0x00ff99 */ | { } 300 | 0, 192, 0, /* green 8 0x00ff00 - */ | { } 301 | 255, 255, 0, /* yellow 9 0xffff00 - */ | { } 302 | 255, 204, 0, /* gold 10 0xffa500 0xffcc00 */ | { } 303 | 255, 102, 0, /* orange 11 0xff4500 0xff6600 */ | { } 304 | 255, 0, 0, /* red 12 0xff0000 - */ | { } 305 | 255, 153, 153, /* pink 13 0xff7256 0xff9999 */ | { } 306 | 255, 204, 204, /* pinktint 14 0xffaeb9 0xffcccc */ | { } 307 | 255, 255, 255, /* white 15 0xffffff -*/ | { } 308 | 0, 0, 0, /* black 16 0x000000 - */ | { } 309 | 204, 204, 255, /* bluetint 17 0xb0e2ff - 0xccccff*/ | { } 310 | 153, 255, 153, /* greentint 18 0x9aff9a - 0x99ff99 */ | { } 311 | 255, 255, 153, /* yellowtint 19 0xffec8b - 0xffff99 */ | { } 312 | 102, 102, 102, /* gray 20 0x7d7d7d 0x666666 */ | { } 313 | 153, 102, 51, /* brown 21 0x8b5742 01x996633 */ | { } 314 | 255, 0, 0, /* perm colors 22: red 0xff0000 - */ | { } 315 | 0, 255, 0, /* perm colors 23: green 0x00ff00 - */ | { } 316 | 255, 0, 255, /* perm colors 24: magenta 0xff00ff - */ | { } 317 | 00, 153, 255, /* perm colors 25: sky 0x1e90ff 0x0099ff */ | { } 318 | 153, 51, 255, /* perm colors 26: purple 0x9b30ff 0x9933ff */ | { } 319 | 0, 255, 0, /* SS colors 27: helix, green 0x00ff00 - */ | { } 320 | 255, 204, 0, /* SS colors 28: strand, gold 0xffa500 0xffcc00 */ | { } 321 | 255, 102, 0, /* SS colors 29: turn, orange 0xff4500 0xff6600 */ | { } 322 | 0, 255, 255, /* SS colors 30: coil, cyan ox00ffff - */ | { } 323 | 255, 255, 0, /* highlight colors 31: yellow 0xffff00 - */ | { } 324 | 0, 0, 0 /* background colors 32: black 0x000000 - */ | { 325 | }; | } ddvcreate.c: In function ‘DDV_CreateDisplayFromIndex_1’: ddvcreate.c:493:17: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 493 | while (more = AlnMgrGetNextAlnBit(mpplp->sap, amp)) | ^~~~ ddvcreate.c: In function ‘DDV_CreateDisplayFromIndex_2’: ddvcreate.c:529:21: warning: variable ‘more’ set but not used [-Wunused-but-set-variable] 529 | Boolean more; | ^~~~ ddvcreate.c: In function ‘DDV_CreateDisplayFromIndex_EX2’: ddvcreate.c:779:17: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 779 | while (more = AlnMgrGetNextAlnBit(mpplp->sap, amp)) | ^~~~ ddvcreate.c:690:21: warning: variable ‘last’ set but not used [-Wunused-but-set-variable] 690 | Boolean last; | ^~~~ ddvcreate.c:686:21: warning: variable ‘PopulateTo’ set but not used [-Wunused-but-set-variable] 686 | Int4 PopulateTo; | ^~~~~~~~~~ ddvcreate.c: In function ‘DDV_DisplayNewBLAST’: ddvcreate.c:1942:16: warning: variable ‘what’ set but not used [-Wunused-but-set-variable] 1942 | Uint1 what; | ^~~~ ddvcreate.c: In function ‘UDV_BigEncodeIdxFeat4’: ddvcreate.c:2878:18: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 2878 | return *((Uint8Ptr) index_g); | ~^~~~~~~~~~~~~~~~~~~ In file included from ../include/samutil.h:234, from ../include/alignmgr.h:266, from ../include/ddvcreate.h:143: ../include/objalignloc.h: At top level: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ In file included from ../include/sqnutils.h:51, from ddvcreate.c:249: ../include/objentgene.h:177:33: warning: ‘Method_methodFree’ declared ‘static’ but never defined [-Wunused-function] 177 | static Method_methodPtr LIBCALL Method_methodFree PROTO ((Method_methodPtr )); | ^~~~~~~~~~~~~~~~~ ../include/objentgene.h:178:33: warning: ‘Method_methodAsnRead’ declared ‘static’ but never defined [-Wunused-function] 178 | static Method_methodPtr LIBCALL Method_methodAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~ ../include/objentgene.h:179:24: warning: ‘Method_methodAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 179 | static Boolean LIBCALL Method_methodAsnWrite PROTO (( Method_methodPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~~~~~~~ ddvcreate.c:2362:16: warning: ‘DDV_DisplayBlastSAP’ defined but not used [-Wunused-function] 2362 | static Boolean DDV_DisplayBlastSAP(SeqAlignPtr sap, ValNodePtr mask, | ^~~~~~~~~~~~~~~~~~~ ddvcreate.c:525:16: warning: ‘DDV_CreateDisplayFromIndex_2’ defined but not used [-Wunused-function] 525 | static Boolean DDV_CreateDisplayFromIndex_2(SeqAlignPtr sap, MsaParaGPopListPtr mpplp, Int2 LineSize) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ddvcreate.c: In function ‘UDV_BigEncodeIdxFeat4’: ddvcreate.c:2878:16: warning: ‘index_g’ is used uninitialized [-Wuninitialized] 2878 | return *((Uint8Ptr) index_g); | ^~~~~~~~~~~~~~~~~~~~~ ddvcreate.c:2873:7: note: ‘index_g’ declared here 2873 | Uint4 index_g[2]; | ^~~~~~~ In function ‘UAMgrInitBitList’, inlined from ‘UAMgrIntUAMsg’ at ddvcreate.c:1237:3: ddvcreate.c:1195:25: warning: ‘start_middle’ may be used uninitialized [-Wmaybe-uninitialized] 1195 | UABitDescrInit(&uamp->ubd[0],0,start_middle-1,TRUE); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ddvcreate.c: In function ‘UAMgrIntUAMsg’: ddvcreate.c:1158:60: note: ‘start_middle’ was declared here 1158 | Int4 halfBspLengthSeqL,halfBspLengthSeqR,halfBspLengthDesc,start_middle,stop_middle; | ^~~~~~~~~~~~ In function ‘UABitDescrInit’, inlined from ‘UAMgrInitBitList’ at ddvcreate.c:1197:4, inlined from ‘UAMgrIntUAMsg’ at ddvcreate.c:1237:3: ddvcreate.c:1141:18: warning: ‘stop_middle’ may be used uninitialized [-Wmaybe-uninitialized] 1141 | ubd->from=Start; | ~~~~~~~~~^~~~~~ ddvcreate.c: In function ‘UAMgrIntUAMsg’: ddvcreate.c:1158:73: note: ‘stop_middle’ was declared here 1158 | Int4 halfBspLengthSeqL,halfBspLengthSeqR,halfBspLengthDesc,start_middle,stop_middle; | ^~~~~~~~~~~ In function ‘UABitDescrInit’, inlined from ‘UAMgrInitBitList’ at ddvcreate.c:1201:4, inlined from ‘UAMgrIntUAMsg’ at ddvcreate.c:1237:3: ddvcreate.c:1141:18: warning: ‘halfBspLengthSeqL’ may be used uninitialized [-Wmaybe-uninitialized] 1141 | ubd->from=Start; | ~~~~~~~~~^~~~~~ ddvcreate.c: In function ‘UAMgrIntUAMsg’: ddvcreate.c:1158:6: note: ‘halfBspLengthSeqL’ was declared here 1158 | Int4 halfBspLengthSeqL,halfBspLengthSeqR,halfBspLengthDesc,start_middle,stop_middle; | ^~~~~~~~~~~~~~~~~ In function ‘UAMgrInitBitList’, inlined from ‘UAMgrIntUAMsg’ at ddvcreate.c:1237:3: ddvcreate.c:1201:81: warning: ‘halfBspLengthSeqR’ may be used uninitialized [-Wmaybe-uninitialized] 1201 | UABitDescrInit(&uamp->ubd[1],halfBspLengthSeqL,MaxLength-halfBspLengthSeqR-1,TRUE); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~ ddvcreate.c: In function ‘UAMgrIntUAMsg’: ddvcreate.c:1158:24: note: ‘halfBspLengthSeqR’ was declared here 1158 | Int4 halfBspLengthSeqL,halfBspLengthSeqR,halfBspLengthDesc,start_middle,stop_middle; | ^~~~~~~~~~~~~~~~~ ddvcreate.c: In function ‘DDV_PopulateDisplayForDisc’: ddvcreate.c:1048:30: warning: ‘vnp_para’ may be used uninitialized [-Wmaybe-uninitialized] 1048 | vnp_list[n-1]=vnp_para; | ~~~~~~~~~~~~~^~~~~~~~~ ddvcreate.c:845:31: note: ‘vnp_para’ was declared here 845 | ValNodePtr vnp,vnp2,vnp3,vnp_para,vnp_mtdp=NULL; | ^~~~~~~~ ddvcreate.c: In function ‘UABuildDescriptor2’: ddvcreate.c:1541:27: warning: ‘stopcopy’ may be used uninitialized [-Wmaybe-uninitialized] 1541 | *TotLength+=(stopcopy-startcopy);/*to be used for the display coord. system*/ | ^~ ddvcreate.c:1484:57: note: ‘stopcopy’ was declared here 1484 | Int4 length,r,cumulpop,StartLetter,startcopy,stopcopy,pop,UAnum; | ^~~~~~~~ ddvcreate.c: In function ‘DDV_DumpSAPInAFile’: ddvcreate.c:1798:9: warning: ‘matrix’ may be used uninitialized [-Wmaybe-uninitialized] 1798 | DDV_AffichageParaG(mpplp,0,0,mpplp->LengthAli-1,mpplp->LengthAli,0,option, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1799 | LineSize,hFile,byteSpp,matrix,gclr,NULL); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ddvcreate.c:1781:17: note: ‘matrix’ was declared here 1781 | Int4Ptr PNTR matrix ; | ^~~~~~ ddvcreate.c: In function ‘DDV_ReadSeqBin’: ddvcreate.c:2593:16: warning: ‘btr’ may be used uninitialized [-Wmaybe-uninitialized] 2593 | return btr; | ^~~ ddvcreate.c:2571:13: note: ‘btr’ was declared here 2571 | Uint1Ptr btr; | ^~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF jsavlt.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/jsavlt.h:4, from jsavlt.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF needleman.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/needleman.h:40, from needleman.c:78: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ needleman.c: In function ‘NeedlemanWunschQuadraticByLoc’: needleman.c:281:24: warning: variable ‘bestDbPos’ set but not used [-Wunused-but-set-variable] 281 | Int4 bestQueryPos, bestDbPos; /*position ending best score in | ^~~~~~~~~ needleman.c:281:10: warning: variable ‘bestQueryPos’ set but not used [-Wunused-but-set-variable] 281 | Int4 bestQueryPos, bestDbPos; /*position ending best score in | ^~~~~~~~~~~~ needleman.c: In function ‘FetchSequenceByLoc’: needleman.c:243:12: warning: ‘query’ may be used uninitialized [-Wmaybe-uninitialized] 243 | return query; | ^~~~~ needleman.c:202:13: note: ‘query’ was declared here 202 | Uint1 * query; | ^~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF txalign.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/maputil.h:113, from ../include/jzcoll.h:123, from ../include/txalign.h:228, from txalign.c:41: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ txalign.c: In function ‘addLinkoutForDefline’: txalign.c:188:13: warning: variable ‘hasLinkout’ set but not used [-Wunused-but-set-variable] 188 | Boolean hasLinkout=FALSE; | ^~~~~~~~~~ txalign.c: In function ‘addLinkoutForBioseq’: txalign.c:256:13: warning: variable ‘hasLinkout’ set but not used [-Wunused-but-set-variable] 256 | Boolean hasLinkout=FALSE; | ^~~~~~~~~~ txalign.c: In function ‘DrawTextToBuffer’: txalign.c:1254:123: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘Nlm_Int8’ {aka ‘long long int’} [-Wformat=] 1254 | snprintf(checkboxBuf, 200, "", sip->data.intvalue, query_number_glb); | ~^ ~~~~~~~~~~~~~~~~~~ | | | | int Nlm_Int8 {aka long long int} | %lld txalign.c: In function ‘load_align_sum_for_StdSeg’: txalign.c:2230:17: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 2230 | if (bsp = BioseqLockById(SeqLocId(ssp->loc->next))) { | ^~~ txalign.c: In function ‘ShowAlignNodeText2Ex’: txalign.c:3030:13: warning: variable ‘is_end’ set but not used [-Wunused-but-set-variable] 3030 | Boolean is_end, strip_semicolon=TRUE; | ^~~~~~ txalign.c: In function ‘Tx_PrintDefLine’: txalign.c:4079:14: warning: unused variable ‘seqid_length’ [-Wunused-variable] 4079 | Int4 seqid_length = 0, total_length = 0; | ^~~~~~~~~~~~ txalign.c: In function ‘PrintDefLinesFromSeqAlignWithPath’: txalign.c:4494:39: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 4494 | } else if (bestid != NULL && !(options & TXALIGN_NO_DUMPGNL) || (options & TXALIGN_NO_ENTREZ)) | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ txalign.c:4498:33: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 4498 | if (bsp = BioseqLockById(bestid)) { | ^~~ txalign.c:4200:10: warning: unused variable ‘ColumnDistance’ [-Wunused-variable] 4200 | Int2 ColumnDistance=2, extraSpace=0, extraSpace2=0, strLen=0, maxEvalWidth=5, maxNWidth=2; | ^~~~~~~~~~~~~~ txalign.c:4192:43: warning: unused variable ‘sip_list’ [-Wunused-variable] 4192 | SeqIdPtr bestid, gi_list, subject_id, sip_list=NULL, last_id; | ^~~~~~~~ txalign.c:4188:17: warning: variable ‘ptr_start’ set but not used [-Wunused-but-set-variable] 4188 | Char *ptr, *ptr_start, *eval_buff_ptr, *bit_score_buff_ptr; | ^~~~~~~~~ txalign.c: In function ‘FormatScoreFromSeqAlignEx’: txalign.c:4817:25: warning: unused variable ‘t_adj’ [-Wunused-variable] 4817 | Int4 m_adj = 0, t_adj = 0; | ^~~~~ txalign.c:4816:29: warning: unused variable ‘last_t_to’ [-Wunused-variable] 4816 | Int4 last_m_to = 0, last_t_to = 0; | ^~~~~~~~~ txalign.c: In function ‘FSFPrintOneDefline’: txalign.c:4925:14: warning: variable ‘seqid_len’ set but not used [-Wunused-but-set-variable] 4925 | Int4 gi, seqid_len = 0; | ^~~~~~~~~ txalign.c: In function ‘FormatScoreFunc’: txalign.c:5142:13: warning: variable ‘allocated’ set but not used [-Wunused-but-set-variable] 5142 | Boolean allocated, first; | ^~~~~~~~~ txalign.c: In function ‘OOFShowSingleAlignment’: txalign.c:5808:33: warning: array subscript has type ‘char’ [-Wchar-subscripts] 5808 | else if(matrix[line1[line_index]][line2[line_index]] > 0) | ~~~~~^~~~~~~~~~~~ txalign.c:5808:52: warning: array subscript has type ‘char’ [-Wchar-subscripts] 5808 | else if(matrix[line1[line_index]][line2[line_index]] > 0) | ~~~~~^~~~~~~~~~~~ txalign.c:5575:13: warning: variable ‘lines’ set but not used [-Wunused-but-set-variable] 5575 | Int4 i, lines, k, shift_info = 0; | ^~~~~ txalign.c: In function ‘OOFDisplayTraceBack1’: txalign.c:6063:33: warning: unused variable ‘st’ [-Wunused-variable] 6063 | tmp[10] = " ", *st; | ^~ txalign.c:6063:9: warning: unused variable ‘tmp’ [-Wunused-variable] 6063 | tmp[10] = " ", *st; | ^~~ txalign.c: In function ‘OOFDisplayTraceBack2’: txalign.c:6137:33: warning: unused variable ‘st’ [-Wunused-variable] 6137 | tmp[10] = " ", *st; | ^~ txalign.c: In function ‘FDGetTaxNamesFromBioseq’: txalign.c:6239:21: warning: variable ‘bdsp’ set but not used [-Wunused-but-set-variable] 6239 | BlastDefLinePtr bdsp; | ^~~~ txalign.c: At top level: txalign.c:310:19: warning: ‘ProcessTextInsertion’ declared ‘static’ but never defined [-Wunused-function] 310 | static ValNodePtr ProcessTextInsertion PROTO((AlignNodePtr anp, Int4 m_left, Int4 m_right, BioseqPtr bsp, Int4 line_len, Int1 frame)); | ^~~~~~~~~~~~~~~~~~~~ txalign.c:2915:1: warning: ‘get_seq_id’ defined but not used [-Wunused-function] 2915 | get_seq_id(SeqAlignPtr sap, Int2 index) | ^~~~~~~~~~ txalign.c:1820:16: warning: ‘has_hit_in_region’ defined but not used [-Wunused-function] 1820 | static Boolean has_hit_in_region(Uint1Ptr all_frame) | ^~~~~~~~~~~~~~~~~ txalign.c:112:16: warning: ‘getNameInitials’ defined but not used [-Wunused-function] 112 | static CharPtr getNameInitials(CharPtr name){ | ^~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from ../include/ncbilcl.h:154: In function ‘snprintf’, inlined from ‘DrawTextToBuffer’ at txalign.c:1288:45: /usr/arm-linux-gnueabi/include/bits/stdio2.h:54:10: warning: ‘HTML_buffer’ may be used uninitialized [-Wmaybe-uninitialized] 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ txalign.c: In function ‘DrawTextToBuffer’: txalign.c:1094:17: note: ‘HTML_buffer’ was declared here 1094 | CharPtr HTML_buffer; | ^~~~~~~~~~~ txalign.c: In function ‘OOFShowSingleAlignment.isra’: txalign.c:5722:11: warning: ‘pro_line_start’ may be used uninitialized [-Wmaybe-uninitialized] 5722 | if(pro_line_start == 0) | ^ txalign.c:5571:48: note: ‘pro_line_start’ was declared here 5571 | Int4 dna_index, pro_index, dna_line_start, pro_line_start; | ^~~~~~~~~~~~~~ txalign.c:5719:12: warning: ‘dna_line_start’ may be used uninitialized [-Wmaybe-uninitialized] 5719 | if (dna_line_start == 0) | ^ txalign.c:5571:32: note: ‘dna_line_start’ was declared here 5571 | Int4 dna_index, pro_index, dna_line_start, pro_line_start; | ^~~~~~~~~~~~~~ In function ‘load_align_sum_for_DenseSeg’, inlined from ‘find_score_in_align’ at txalign.c:2413:13: txalign.c:2080:35: warning: ‘smtp’ may be used uninitialized [-Wmaybe-uninitialized] 2080 | stdaa_res = SeqMapTableConvert(smtp, t_res); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ txalign.c: In function ‘find_score_in_align’: txalign.c:1980:20: note: ‘smtp’ was declared here 1980 | SeqMapTablePtr smtp; | ^~~~ In function ‘load_align_sum_for_DenseDiag’, inlined from ‘find_score_in_align’ at txalign.c:2404:21: txalign.c:1941:14: warning: ‘m_spp’ may be used uninitialized [-Wmaybe-uninitialized] 1941 | if(m_spp == NULL || t_spp == NULL) { | ^ txalign.c: In function ‘find_score_in_align’: txalign.c:1876:16: note: ‘m_spp’ was declared here 1876 | SeqPortPtr m_spp, t_spp; | ^~~~~ In function ‘load_align_sum_for_DenseDiag’, inlined from ‘find_score_in_align’ at txalign.c:2404:21: txalign.c:1941:31: warning: ‘t_spp’ may be used uninitialized [-Wmaybe-uninitialized] 1941 | if(m_spp == NULL || t_spp == NULL) { | ^ txalign.c: In function ‘find_score_in_align’: txalign.c:1876:23: note: ‘t_spp’ was declared here 1876 | SeqPortPtr m_spp, t_spp; | ^~~~~ In file included from ../include/ncbi.h:58: In function ‘translate_faked_cds’, inlined from ‘ShowAlignNodeText2Ex.isra’ at txalign.c:3457:46: txalign.c:1753:63: warning: ‘m_len’ may be used uninitialized [-Wmaybe-uninitialized] 1753 | n = MAX(0, (master_len-1 - m_stop)/3 -1); | ~~~~~~~~~~^~ ../include/ncbistd.h:255:32: note: in definition of macro ‘MAX’ 255 | #define MAX(a,b) ((a)>=(b)?(a):(b)) | ^ txalign.c: In function ‘ShowAlignNodeText2Ex.isra’: txalign.c:3025:10: note: ‘m_len’ was declared here 3025 | Int4 m_len; /*length of the master sequence*/ | ^~~~~ txalign.c: In function ‘ShowTextAlignFromAnnot3’: txalign.c:949:12: warning: ‘retval’ may be used uninitialized [-Wmaybe-uninitialized] 949 | return retval; | ^~~~~~ txalign.c:726:13: note: ‘retval’ was declared here 726 | Boolean retval, matrix_loaded=FALSE; | ^~~~~~ txalign.c: In function ‘FormatScoreFunc’: txalign.c:4747:42: warning: ‘%d’ directive writing between 1 and 6 bytes into a region of size 5 [-Wformat-overflow=] 4747 | sprintf(buffer, "%d", frame); | ^~ In function ‘NumToFrame’, inlined from ‘NumToFrame’ at txalign.c:4737:1, inlined from ‘FormatScoreFunc’ at txalign.c:5415:17: txalign.c:4747:41: note: directive argument in the range [-32768, 0] 4747 | sprintf(buffer, "%d", frame); | ^~~~ In function ‘sprintf’, inlined from ‘NumToFrame’ at txalign.c:4747:4, inlined from ‘NumToFrame’ at txalign.c:4737:1, inlined from ‘FormatScoreFunc’ at txalign.c:5415:17: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 7 bytes into a destination of size 5 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ txalign.c: In function ‘FormatScoreFunc’: txalign.c:4743:43: warning: ‘%d’ directive writing between 1 and 5 bytes into a region of size 4 [-Wformat-overflow=] 4743 | sprintf(buffer, "+%d", frame); | ^~ In function ‘NumToFrame’, inlined from ‘FormatScoreFunc’ at txalign.c:5415:17: txalign.c:4743:41: note: directive argument in the range [1, 32767] 4743 | sprintf(buffer, "+%d", frame); | ^~~~~ In function ‘sprintf’, inlined from ‘NumToFrame’ at txalign.c:4743:4, inlined from ‘FormatScoreFunc’ at txalign.c:5415:17: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 3 and 7 bytes into a destination of size 5 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ txalign.c: In function ‘FormatScoreFunc’: txalign.c:4747:42: warning: ‘%d’ directive writing between 1 and 6 bytes into a region of size 5 [-Wformat-overflow=] 4747 | sprintf(buffer, "%d", frame); | ^~ In function ‘NumToFrame’, inlined from ‘NumToFrame’ at txalign.c:4737:1, inlined from ‘FormatScoreFunc’ at txalign.c:5412:17: txalign.c:4747:41: note: directive argument in the range [-32768, 0] 4747 | sprintf(buffer, "%d", frame); | ^~~~ In function ‘sprintf’, inlined from ‘NumToFrame’ at txalign.c:4747:4, inlined from ‘NumToFrame’ at txalign.c:4737:1, inlined from ‘FormatScoreFunc’ at txalign.c:5412:17: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 7 bytes into a destination of size 5 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ txalign.c: In function ‘FormatScoreFunc’: txalign.c:4743:43: warning: ‘%d’ directive writing between 1 and 5 bytes into a region of size 4 [-Wformat-overflow=] 4743 | sprintf(buffer, "+%d", frame); | ^~ In function ‘NumToFrame’, inlined from ‘FormatScoreFunc’ at txalign.c:5412:17: txalign.c:4743:41: note: directive argument in the range [1, 32767] 4743 | sprintf(buffer, "+%d", frame); | ^~~~~ In function ‘sprintf’, inlined from ‘NumToFrame’ at txalign.c:4743:4, inlined from ‘FormatScoreFunc’ at txalign.c:5412:17: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 3 and 7 bytes into a destination of size 5 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ txalign.c: In function ‘FormatScoreFunc’: txalign.c:4747:42: warning: ‘%d’ directive writing between 1 and 6 bytes into a region of size 5 [-Wformat-overflow=] 4747 | sprintf(buffer, "%d", frame); | ^~ In function ‘NumToFrame’, inlined from ‘NumToFrame’ at txalign.c:4737:1, inlined from ‘FormatScoreFunc’ at txalign.c:5410:17: txalign.c:4747:41: note: directive argument in the range [-32768, 0] 4747 | sprintf(buffer, "%d", frame); | ^~~~ In function ‘sprintf’, inlined from ‘NumToFrame’ at txalign.c:4747:4, inlined from ‘NumToFrame’ at txalign.c:4737:1, inlined from ‘FormatScoreFunc’ at txalign.c:5410:17: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 7 bytes into a destination of size 5 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ txalign.c: In function ‘FormatScoreFunc’: txalign.c:4743:43: warning: ‘%d’ directive writing between 1 and 5 bytes into a region of size 4 [-Wformat-overflow=] 4743 | sprintf(buffer, "+%d", frame); | ^~ In function ‘NumToFrame’, inlined from ‘FormatScoreFunc’ at txalign.c:5410:17: txalign.c:4743:41: note: directive argument in the range [1, 32767] 4743 | sprintf(buffer, "+%d", frame); | ^~~~~ In function ‘sprintf’, inlined from ‘NumToFrame’ at txalign.c:4743:4, inlined from ‘FormatScoreFunc’ at txalign.c:5410:17: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 3 and 7 bytes into a destination of size 5 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ txalign.c: In function ‘FormatScoreFunc’: txalign.c:4747:42: warning: ‘%d’ directive writing between 1 and 6 bytes into a region of size 5 [-Wformat-overflow=] 4747 | sprintf(buffer, "%d", frame); | ^~ In function ‘NumToFrame’, inlined from ‘NumToFrame’ at txalign.c:4737:1, inlined from ‘FormatScoreFunc’ at txalign.c:5410:17: txalign.c:4747:41: note: directive argument in the range [-32768, 0] 4747 | sprintf(buffer, "%d", frame); | ^~~~ In function ‘sprintf’, inlined from ‘NumToFrame’ at txalign.c:4747:4, inlined from ‘NumToFrame’ at txalign.c:4737:1, inlined from ‘FormatScoreFunc’ at txalign.c:5410:17: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 7 bytes into a destination of size 5 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ txalign.c: In function ‘FormatScoreFunc’: txalign.c:4743:43: warning: ‘%d’ directive writing between 1 and 5 bytes into a region of size 4 [-Wformat-overflow=] 4743 | sprintf(buffer, "+%d", frame); | ^~ In function ‘NumToFrame’, inlined from ‘FormatScoreFunc’ at txalign.c:5410:17: txalign.c:4743:41: note: directive argument in the range [1, 32767] 4743 | sprintf(buffer, "+%d", frame); | ^~~~~ In function ‘sprintf’, inlined from ‘NumToFrame’ at txalign.c:4743:4, inlined from ‘FormatScoreFunc’ at txalign.c:5410:17: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 3 and 7 bytes into a destination of size 5 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ txalign.c: In function ‘PrintDefLinesFromSeqAlignWithPath’: txalign.c:4647:50: warning: ‘%s’ directive writing up to 2048 bytes into a region of size 2038 [-Wformat-overflow=] 4647 | sprintf(buffer1, "%s", id_buffer, bit_score_buff_ptr); | ^~ ~~~~~~~~~ In function ‘sprintf’, inlined from ‘PrintDefLinesFromSeqAlignWithPath’ at txalign.c:4647:21: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 17 and 2074 bytes into a destination of size 2049 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ txalign.c: In function ‘PrintDefLinesFromSeqAlignWithPath’: txalign.c:4645:51: warning: ‘%s’ directive writing up to 2048 bytes into a region of size 2037 [-Wformat-overflow=] 4645 | sprintf(buffer1, " %s", id_buffer, bit_score_buff_ptr); | ^~ ~~~~~~~~~ In function ‘sprintf’, inlined from ‘PrintDefLinesFromSeqAlignWithPath’ at txalign.c:4645:21: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 18 and 2074 bytes into a destination of size 2049 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF fdlobj.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from fdlobj.c:1: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ fdlobj.c: In function ‘BlastDefLineSetAsnRead’: fdlobj.c:69:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 69 | AsnReadFunc func; | ^~~~ fdlobj.c: In function ‘BlastDefLineAsnRead’: fdlobj.c:202:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 202 | AsnReadFunc func; | ^~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF alignmgr2.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/alignmgr2.h:110, from alignmgr2.c:242: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ alignmgr2.c: In function ‘AlnMgr2IndexSingleDenseSegSA’: alignmgr2.c:885:13: warning: statement with no effect [-Wunused-value] 885 | for (j; jnumseg && next == -1; j++) | ^~~ alignmgr2.c: In function ‘AlnMgr2CopySeg’: alignmgr2.c:2984:11: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 2984 | if (ldelta = ABS(s->beg - beg)) { | ^~~~~~ alignmgr2.c: In function ‘AlnMgr2AddInNewPairwiseSA’: alignmgr2.c:3221:10: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 3221 | while (a = AlnMgr2GetNextSeqPiece(a)) { | ^ alignmgr2.c:3223:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 3223 | while (b = AlnMgr2GetNextLimitedSeqPiece(b, a)) { | ^ alignmgr2.c:3233:10: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 3233 | while (A = AlnMgr2GetNextSeqPiece(A)) { | ^ alignmgr2.c:3237:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 3237 | while (B = AlnMgr2GetNextLimitedSeqPiece(B, A)) {}; | ^ alignmgr2.c: In function ‘AlnMgr2SetUnaln’: alignmgr2.c:5410:22: warning: variable ‘dsp’ set but not used [-Wunused-but-set-variable] 5410 | DenseSegPtr dsp; | ^~~ alignmgr2.c: In function ‘AlnMgr2PrintSeqAlign’: alignmgr2.c:5623:17: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 5623 | while (more = AlnMgr2GetNextAlnBit(sap, amp)) | ^~~~ alignmgr2.c: In function ‘AlnMgr2GetNextAlnBit’: alignmgr2.c:5719:21: warning: variable ‘found’ set but not used [-Wunused-but-set-variable] 5719 | Boolean found; | ^~~~~ alignmgr2.c: In function ‘AlnMgr2GetUnalignedInfo’: alignmgr2.c:6085:22: warning: variable ‘saip’ set but not used [-Wunused-but-set-variable] 6085 | SAIndex2Ptr saip; | ^~~~ alignmgr2.c: In function ‘AlnMgr2GetInterruptInfo’: alignmgr2.c:6331:7: warning: statement with no effect [-Wunused-value] 6331 | for (i; isegnum; i++) | ^~~ alignmgr2.c: In function ‘AlnMgr2GetAlnLength’: alignmgr2.c:6774:20: warning: comparison between pointer and zero character constant [-Wpointer-compare] 6774 | if (saip->unaln == FALSE || fill_in == FALSE) | ^~ alignmgr2.c:6774:8: note: did you mean to dereference the pointer? 6774 | if (saip->unaln == FALSE || fill_in == FALSE) | ^ alignmgr2.c: In function ‘AlnMgr2ComputeScoreForSeqAlign’: alignmgr2.c:8341:17: warning: variable ‘numseqs’ set but not used [-Wunused-but-set-variable] 8341 | Int4 numseqs; | ^~~~~~~ alignmgr2.c:8339:17: warning: variable ‘mismatch’ set but not used [-Wunused-but-set-variable] 8339 | Int4 mismatch; | ^~~~~~~~ alignmgr2.c:8338:17: warning: variable ‘len’ set but not used [-Wunused-but-set-variable] 8338 | Int4 len; | ^~~ In file included from ../include/samutil.h:234, from ../include/alignmgr2.h:114: ../include/objalignloc.h: At top level: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ alignmgr2.c:3557:13: warning: ‘AlnMgr2AddInNewSA’ defined but not used [-Wunused-function] 3557 | static void AlnMgr2AddInNewSA(SeqAlignPtr parent, SeqAlignPtr sap) | ^~~~~~~~~~~~~~~~~ alignmgr2.c:2368:18: warning: ‘AlnMgr2GetEdgeList’ defined but not used [-Wunused-function] 2368 | static AMEdgePtr AlnMgr2GetEdgeList(Int4 vertexnum, AMEdgePtr edge_head, AMEdgePtr already_used) | ^~~~~~~~~~~~~~~~~~ alignmgr2.c:2140:13: warning: ‘AlnMgr2SortVerticesByNumEdges’ defined but not used [-Wunused-function] 2140 | static void AlnMgr2SortVerticesByNumEdges(AMVertexPtr PNTR vertexarray, Int4 numvertices) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ alignmgr2.c:1061:13: warning: ‘AlnMgr2UnpackSeqAlignChain’ defined but not used [-Wunused-function] 1061 | static void AlnMgr2UnpackSeqAlignChain(SeqAlignPtr sap) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘AlnMgr2UnpackSeqAlign’, inlined from ‘AlnMgr2IndexLite’ at alignmgr2.c:1169:9: alignmgr2.c:1001:33: warning: ‘sap_segs_prev’ may be used uninitialized [-Wmaybe-uninitialized] 1001 | sap_segs_prev->next = (SeqAlignPtr)(sap_segs->segs); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ alignmgr2.c: In function ‘AlnMgr2IndexLite’: alignmgr2.c:968:17: note: ‘sap_segs_prev’ was declared here 968 | SeqAlignPtr sap_segs_prev; | ^~~~~~~~~~~~~ alignmgr2.c: In function ‘AlnMgr2GetUnalignedInfo’: alignmgr2.c:6106:26: warning: ‘dsp’ may be used uninitialized [-Wmaybe-uninitialized] 6106 | if (dsp->starts[dsp->dim*i+row-1] != -1) | ~~~^~~~~ alignmgr2.c:6082:21: note: ‘dsp’ was declared here 6082 | DenseSegPtr dsp; | ^~~ alignmgr2.c: In function ‘AlnMgr2GetMaxUnalignedLength’: alignmgr2.c:7066:23: warning: ‘dsp’ may be used uninitialized [-Wmaybe-uninitialized] 7066 | for (row=0; rowdim && !found; row++) | ~~~^~~~~ alignmgr2.c:7042:21: note: ‘dsp’ was declared here 7042 | DenseSegPtr dsp; | ^~~ alignmgr2.c:7068:23: warning: ‘saip’ may be used uninitialized [-Wmaybe-uninitialized] 7068 | for (i=0; isrdp[row]->numunaln && !found; i++) | ~~~~^~~~~~ alignmgr2.c:7048:22: note: ‘saip’ was declared here 7048 | SAIndex2Ptr saip; | ^~~~ alignmgr2.c: In function ‘AlnMgr2GetInterruptInfo’: alignmgr2.c:6178:11: warning: ‘dsp’ may be used uninitialized [-Wmaybe-uninitialized] 6178 | if (dsp->numseg < interrupt->segnum) | ~~~^~~~~~~~ alignmgr2.c:6148:22: note: ‘dsp’ was declared here 6148 | DenseSegPtr dsp; | ^~~ alignmgr2.c:6180:12: warning: ‘saip’ may be used uninitialized [-Wmaybe-uninitialized] 6180 | if (saip->anchor > 0) | ~~~~^~~~~~~~ alignmgr2.c:6157:22: note: ‘saip’ was declared here 6157 | SAIndex2Ptr saip; | ^~~~ alignmgr2.c:6353:16: warning: ‘iip’ may be used uninitialized [-Wmaybe-uninitialized] 6353 | iip->strand = strand; | ~~~~~~~~~~~~^~~~~~~~ alignmgr2.c:6150:22: note: ‘iip’ was declared here 6150 | AMInterrInfoPtr iip; | ^~~ In function ‘AlnMgr2GetNthSeqRangeInSASet’, inlined from ‘AlnMgr2GetNthSeqRangeInSA’ at alignmgr2.c:6470:10: alignmgr2.c:6595:14: warning: ‘from’ may be used uninitialized [-Wmaybe-uninitialized] 6595 | *start = from; | ~~~~~~~^~~~~~ alignmgr2.c: In function ‘AlnMgr2GetNthSeqRangeInSA’: alignmgr2.c:6567:22: note: ‘from’ declared here 6567 | Int4 from; | ^~~~ In function ‘AlnMgr2GetNthSeqRangeInSASet’, inlined from ‘AlnMgr2GetNthSeqRangeInSA’ at alignmgr2.c:6470:10: alignmgr2.c:6595:14: warning: ‘from’ may be used uninitialized [-Wmaybe-uninitialized] 6595 | *start = from; | ~~~~~~~^~~~~~ alignmgr2.c: In function ‘AlnMgr2GetNthSeqRangeInSA’: alignmgr2.c:6567:22: note: ‘from’ declared here 6567 | Int4 from; | ^~~~ alignmgr2.c:6486:76: warning: ‘dsp’ may be used uninitialized [-Wmaybe-uninitialized] 6486 | end = dsp->starts[srdp->sect[srdp->numsect-1]*(dsp->dim) + n-1] + dsp->lens[srdp->sect[srdp->numsect-1]] - 1; | ~~~^~~~~~ alignmgr2.c:6449:21: note: ‘dsp’ was declared here 6449 | DenseSegPtr dsp; | ^~~ alignmgr2.c:6476:16: warning: ‘saip’ may be used uninitialized [-Wmaybe-uninitialized] 6476 | if (n > saip->numrows || n <= 0) | ~~~~^~~~~~~~~ alignmgr2.c:6451:22: note: ‘saip’ was declared here 6451 | SAIndex2Ptr saip; | ^~~~ alignmgr2.c: In function ‘AlnMgr2GetNthRowSpanInSA’: alignmgr2.c:6558:41: warning: ‘dsp’ may be used uninitialized [-Wmaybe-uninitialized] 6558 | *stop = saip->aligncoords[i] + dsp->lens[srdp->sect[srdp->numsect-1]] - 1; | ~~~^~~~~~ alignmgr2.c:6510:21: note: ‘dsp’ was declared here 6510 | DenseSegPtr dsp; | ^~~ alignmgr2.c:6533:16: warning: ‘saip’ may be used uninitialized [-Wmaybe-uninitialized] 6533 | if (n > saip->numrows || n <= 0) | ~~~~^~~~~~~~~ alignmgr2.c:6512:22: note: ‘saip’ was declared here 6512 | SAIndex2Ptr saip; | ^~~~ alignmgr2.c: In function ‘AlnMgr2GetAlnLength’: alignmgr2.c:6786:22: warning: ‘dsp’ may be used uninitialized [-Wmaybe-uninitialized] 6786 | for (i=0; inumseg; i++) | ~~~^~~~~~~~ alignmgr2.c:6751:21: note: ‘dsp’ was declared here 6751 | DenseSegPtr dsp; | ^~~ alignmgr2.c:6774:12: warning: ‘saip’ may be used uninitialized [-Wmaybe-uninitialized] 6774 | if (saip->unaln == FALSE || fill_in == FALSE) | ~~~~^~~~~~~ alignmgr2.c:6755:22: note: ‘saip’ was declared here 6755 | SAIndex2Ptr saip; | ^~~~ alignmgr2.c:6789:17: warning: ‘salp’ may be used uninitialized [-Wmaybe-uninitialized] 6789 | len += AlnMgr2GetMaxUnalignedLength(salp, i); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ alignmgr2.c:6756:21: note: ‘salp’ was declared here 6756 | SeqAlignPtr salp; | ^~~~ In file included from ../include/ncbi.h:59: alignmgr2.c: In function ‘AlnMgr2GetNextAlnBit’: alignmgr2.c:5787:35: warning: ‘dsp’ may be used uninitialized [-Wmaybe-uninitialized] 5787 | trans = (Uint2Ptr)MemNew(dsp->numseg*sizeof(Uint2)); | ~~~^~~~~~~~ ../include/ncbimem.h:230:34: note: in definition of macro ‘MemNew’ 230 | #define MemNew(x) Nlm_MemGet(x,MGET_CLEAR|MGET_ERRPOST) | ^ alignmgr2.c:5717:21: note: ‘dsp’ was declared here 5717 | DenseSegPtr dsp; | ^~~ alignmgr2.c:5759:27: warning: ‘saip’ may be used uninitialized [-Wmaybe-uninitialized] 5759 | if (amp->row_num > saip->numrows) | ~~~~^~~~~~~~~ alignmgr2.c:5727:22: note: ‘saip’ was declared here 5727 | SAIndex2Ptr saip; | ^~~~ alignmgr2.c: In function ‘AlnMgr2IsSAPDiscAli’: alignmgr2.c:6813:12: warning: ‘saip’ may be used uninitialized [-Wmaybe-uninitialized] 6813 | if (saip->numunaln > 0) | ~~~~^~~~~~~~~~ alignmgr2.c:6799:22: note: ‘saip’ was declared here 6799 | SAIndex2Ptr saip; | ^~~~ alignmgr2.c: In function ‘AlnMgr2GetNumAlnBlocks’: alignmgr2.c:6836:12: warning: ‘saip’ may be used uninitialized [-Wmaybe-uninitialized] 6836 | if (saip->numunaln >= 0) | ~~~~^~~~~~~~~~ alignmgr2.c:6822:22: note: ‘saip’ was declared here 6822 | SAIndex2Ptr saip; | ^~~~ alignmgr2.c: In function ‘AlnMgr2GetNthBlockRange’: alignmgr2.c:6866:17: warning: ‘saip’ may be used uninitialized [-Wmaybe-uninitialized] 6866 | if (n >= saip->numunaln) | ~~~~^~~~~~~~~~ alignmgr2.c:6848:22: note: ‘saip’ was declared here 6848 | SAIndex2Ptr saip; | ^~~~ alignmgr2.c: In function ‘AlnMgr2GetNthUnalignedForNthRow’: alignmgr2.c:6927:57: warning: ‘dsp’ may be used uninitialized [-Wmaybe-uninitialized] 6927 | if (i == -1 || saip->srdp[row-1]->unaligned[i] >= dsp->numseg-1) | ~~~^~~~~~~~ alignmgr2.c:6887:22: note: ‘dsp’ was declared here 6887 | DenseSegPtr dsp; | ^~~ alignmgr2.c:6907:18: warning: ‘saip’ may be used uninitialized [-Wmaybe-uninitialized] 6907 | if (row > saip->numrows) | ~~~~^~~~~~~~~ alignmgr2.c:6889:22: note: ‘saip’ was declared here 6889 | SAIndex2Ptr saip; | ^~~~ alignmgr2.c: In function ‘AlnMgr2GetNextLengthBit’: alignmgr2.c:7021:25: warning: ‘dsp’ may be used uninitialized [-Wmaybe-uninitialized] 7021 | maxseg = dsp->numseg-1; | ~~~^~~~~~~~ alignmgr2.c:6954:22: note: ‘dsp’ was declared here 6954 | DenseSegPtr dsp; | ^~~ alignmgr2.c:6974:12: warning: ‘saip’ may be used uninitialized [-Wmaybe-uninitialized] 6974 | if (saip->numunaln == -1) /* the whole thing is just one big aligned segment */ | ~~~~^~~~~~~~~~ alignmgr2.c:6958:22: note: ‘saip’ was declared here 6958 | SAIndex2Ptr saip; | ^~~~ In function ‘binary_search_on_uint4_list’, inlined from ‘AlnMgr2GetNumSegsInRange’ at alignmgr2.c:7185:12: alignmgr2.c:6038:13: warning: ‘aligncoords’ may be used uninitialized [-Wmaybe-uninitialized] 6038 | if (list == NULL || listlen == 0) | ^ alignmgr2.c: In function ‘AlnMgr2GetNumSegsInRange’: alignmgr2.c:7150:21: note: ‘aligncoords’ was declared here 7150 | Uint4Ptr aligncoords; | ^~~~~~~~~~~ alignmgr2.c:7185:62: warning: ‘dsp’ may be used uninitialized [-Wmaybe-uninitialized] 7185 | start = binary_search_on_uint4_list(aligncoords, from, dsp->numseg); | ~~~^~~~~~~~ alignmgr2.c:7152:21: note: ‘dsp’ was declared here 7152 | DenseSegPtr dsp; | ^~~ alignmgr2.c: In function ‘AlnMgr2MapBioseqToSeqAlign’: alignmgr2.c:7649:51: warning: ‘dsp’ may be used uninitialized [-Wmaybe-uninitialized] 7649 | offset = pos - dsp->starts[(srdp->sect[L])*(dsp->dim)+row-1]; | ~~~~^~~~~~ alignmgr2.c:7590:21: note: ‘dsp’ was declared here 7590 | DenseSegPtr dsp; | ^~~ alignmgr2.c:7619:18: warning: ‘saip’ may be used uninitialized [-Wmaybe-uninitialized] 7619 | if (row > saip->numrows) | ~~~~^~~~~~~~~ alignmgr2.c:7596:22: note: ‘saip’ was declared here 7596 | SAIndex2Ptr saip; | ^~~~ alignmgr2.c: In function ‘AlnMgr2MapSeqAlignToBioseq’: alignmgr2.c:7728:36: warning: ‘dsp’ may be used uninitialized [-Wmaybe-uninitialized] 7728 | return (dsp->starts[sect*(dsp->dim)+row-1] + offset); | ~~~~^~~~~~ alignmgr2.c:7685:21: note: ‘dsp’ was declared here 7685 | DenseSegPtr dsp; | ^~~ alignmgr2.c:7712:18: warning: ‘saip’ may be used uninitialized [-Wmaybe-uninitialized] 7712 | if (row > saip->numrows) | ~~~~^~~~~~~~~ alignmgr2.c:7688:21: note: ‘saip’ was declared here 7688 | SAIndex2Ptr saip; | ^~~~ alignmgr2.c: In function ‘AlnMgr2GetSubAlign’: alignmgr2.c:8036:13: warning: ‘sap_real’ may be used uninitialized [-Wmaybe-uninitialized] 8036 | if ((a = AlnMgr2FindAnchor(sap_real)) > 0) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ alignmgr2.c:7999:21: note: ‘sap_real’ was declared here 7999 | SeqAlignPtr sap_real; | ^~~~~~~~ alignmgr2.c: In function ‘AlnMgr2MapBioseqToSeqAlignStdSeg’: alignmgr2.c:10175:12: warning: ‘slp_longest’ may be used uninitialized [-Wmaybe-uninitialized] 10175 | stop1 = SeqLocStop(slp_longest); | ^~~~~~~~~~~~~~~~~~~~~~~ alignmgr2.c:10131:15: note: ‘slp_longest’ was declared here 10131 | SeqLocPtr slp_longest; | ^~~~~~~~~~~ alignmgr2.c: In function ‘AlnMgr2MapSeqAlignToBioseqStdSeg’: alignmgr2.c:10209:12: warning: ‘slp_longest’ may be used uninitialized [-Wmaybe-uninitialized] 10209 | stop1 = SeqLocStop(slp_longest); | ^~~~~~~~~~~~~~~~~~~~~~~ alignmgr2.c:10131:15: note: ‘slp_longest’ was declared here 10131 | SeqLocPtr slp_longest; | ^~~~~~~~~~~ alignmgr2.c: In function ‘AlnMgr2GetAlnLengthStdSeg’: alignmgr2.c:10236:12: warning: ‘slp_longest’ may be used uninitialized [-Wmaybe-uninitialized] 10236 | return (SeqLocLen(slp_longest)); | ~^~~~~~~~~~~~~~~~~~~~~~~ alignmgr2.c:10131:15: note: ‘slp_longest’ was declared here 10131 | SeqLocPtr slp_longest; | ^~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF alnread.c In function ‘s_AddDeflineFromOrganismLine’, inlined from ‘s_ReadOrgNamesFromText’ at alnread.c:2949:9: alnread.c:2876:17: warning: ‘free’ called on pointer ‘*clp.end’ with nonzero offset 1 [-Wfree-nonheap-object] 2876 | free (defline); | ^~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF acerdapi.c acerdapi.c: In function ‘DoesSeqStringMatchBsp’: acerdapi.c:201:30: warning: variable ‘seq_len’ set but not used [-Wunused-but-set-variable] 201 | Int4 ctr, pos = 0, i, len, seq_len; | ^~~~~~~ In file included from ../include/samutil.h:234, from ../include/alignmgr2.h:114, from acerdapi.c:40: ../include/objalignloc.h: At top level: ../include/objalignloc.h:80:27: warning: ‘Loc_locFree’ declared ‘static’ but never defined [-Wunused-function] 80 | static Loc_locPtr LIBCALL Loc_locFree PROTO ((Loc_locPtr )); | ^~~~~~~~~~~ ../include/objalignloc.h:81:27: warning: ‘Loc_locAsnRead’ declared ‘static’ but never defined [-Wunused-function] 81 | static Loc_locPtr LIBCALL Loc_locAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~ ../include/objalignloc.h:82:24: warning: ‘Loc_locAsnWrite’ declared ‘static’ but never defined [-Wunused-function] 82 | static Boolean LIBCALL Loc_locAsnWrite PROTO (( Loc_locPtr , AsnIoPtr, AsnTypePtr)); | ^~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF aceread.c aceread.c:3308:12: warning: ‘s_GetUngappedPosition’ defined but not used [-Wunused-function] 3308 | static int s_GetUngappedPosition (int gapped_pos, char *seq) | ^~~~~~~~~~~~~~~~~~~~~ aceread.c:276:13: warning: ‘AdjustGapInfoFor3Trim’ defined but not used [-Wunused-function] 276 | static void AdjustGapInfoFor3Trim (TGapInfoPtr gap_info, int new_len) | ^~~~~~~~~~~~~~~~~~~~~ aceread.c:247:13: warning: ‘AdjustGapInfoFor5Trim’ defined but not used [-Wunused-function] 247 | static void AdjustGapInfoFor5Trim (TGapInfoPtr gap_info, int trim) | ^~~~~~~~~~~~~~~~~~~~~ aceread.c:134:12: warning: ‘s_IsGapChar’ defined but not used [-Wunused-function] 134 | static int s_IsGapChar (char ch, char *gap_chars) | ^~~~~~~~~~~ aceread.c: In function ‘ReadListFree’: aceread.c:2148:11: warning: pointer ‘r_next’ used after ‘free’ [-Wuse-after-free] 2148 | r = r_next; | ~~^~~~~~~~ aceread.c:2147:9: note: call to ‘free’ here 2147 | free (r); | ^~~~~~~~ aceread.c: In function ‘s_ReadContig’: aceread.c:1477:33: warning: ‘linestring’ may be used uninitialized [-Wmaybe-uninitialized] 1477 | if (linestring != NULL) free (linestring); | ^~~~~~~~~~~~~~~~~ aceread.c:1384:16: note: ‘linestring’ was declared here 1384 | char *linestring; | ^~~~~~~~~~ rm -f libncbiobj.a ar cru libncbiobj.a objacces.o objalign.o objall.o objbibli.o objfeat.o objgen.o objloc.o objmedli.o objpub.o objres.o objscoremat.o objseq.o objblock.o objcode.o objsset.o objsub.o objprt.o objfdef.o objalignloc.o objtable.o objpubme.o objmdrs.o objproj.o objgbseq.o objtseq.o objinsdseq.o objmacro.o objent2.o ent2api.o pmfapi.o objtax3.o tax3api.o objegkludge.o objentgene.o objmla2.o mla2api.o qblastapi.o vecscnapi.o objmim.o objvalid.o mimapi.o cddapi.o seqport.o sequtil.o prtutil.o simple.o tofasta.o tofile.o tomedlin.o valid.o valapi.o alignmgr.o aliparse.o aliread.o alignval.o sqnutil1.o sqnutil2.o sqnutil3.o sqnutil4.o subutil.o edutil.o asn2ff1.o asn2ff2.o asn2ff3.o asn2ff4.o asn2ff5.o asn2ff6.o asn2gnb1.o asn2gnb2.o asn2gnb3.o asn2gnb4.o asn2gnb5.o asn2gnb6.o ftusrstr.o gbfeat.o gbftglob.o gbparint.o utilpars.o utilpub.o ffprint.o wprint.o satutil.o seqmgr.o objmgr.o gather.o accmmdbs.o acccn3ds.o lsqfetch.o findrepl.o codon.o jzcoll.o jzmisc.o maputil.o mconsist.o macroapi.o salpedit.o salpstat.o salpacc.o salprop.o salsap.o salstruc.o salutil.o udvseq.o blocks.o pgppop.o samutil.o ddvcolor.o viewmgr.o ddvcreate.o jsavlt.o needleman.o txalign.o fdlobj.o alignmgr2.o alnread.o acerdapi.o aceread.o ar: `u' modifier ignored since `D' is the default (see `U') cp -p libncbiobj.a ../lib ranlib ../lib/libncbiobj.a arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF cdentrez.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objsset.h:48, from ../include/accentr.h:125, from cdentrez.c:162: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ cdentrez.c:283:23: warning: ‘CdEntMlSumGet’ declared ‘static’ but never defined [-Wunused-function] 283 | static DocSumPtr NEAR CdEntMlSumGet PROTO((Int4 uid)); | ^~~~~~~~~~~~~ cdentrez.c:310:23: warning: ‘CdEntSeqSumGet’ declared ‘static’ but never defined [-Wunused-function] 310 | static DocSumPtr NEAR CdEntSeqSumGet PROTO((Int4 uid, DocType type)); | ^~~~~~~~~~~~~~ cdentrez.c:2935:23: warning: ‘MedSumAsnRead’ defined but not used [-Wunused-function] 2935 | static DocSumPtr NEAR MedSumAsnRead (AsnIoPtr aip, DocUid uid) | ^~~~~~~~~~~~~ cdentrez.c:1616:26: warning: ‘FreePostingList’ defined but not used [-Wunused-function] 1616 | static ByteStorePtr NEAR FreePostingList (ByteStorePtr lst) | ^~~~~~~~~~~~~~~ cdentrez.c:307:20: warning: ‘BIOSEQ_id_E’ defined but not used [-Wunused-variable] 307 | static AsnTypePtr BIOSEQ_id_E = NULL; | ^~~~~~~~~~~ cdentrez.c: In function ‘CdEntrezMergeTerm’: cdentrez.c:2637:12: warning: ‘termpage’ may be used uninitialized [-Wmaybe-uninitialized] 2637 | if (termpage >= 0) { | ^ cdentrez.c:2573:9: note: ‘termpage’ was declared here 2573 | Int4 termpage; | ^~~~~~~~ cdentrez.c:2672:17: warning: ‘special’ may be used uninitialized [-Wmaybe-uninitialized] 2672 | *spcl = special; | ~~~~~~^~~~~~~~~ cdentrez.c:2570:9: note: ‘special’ was declared here 2570 | Int4 special; | ^~~~~~~ cdentrez.c:2665:18: warning: ‘total’ may be used uninitialized [-Wmaybe-uninitialized] 2665 | if (scanOk && total > 0) { | ~~~~~~~^~~~~~~~~~~~ cdentrez.c:2572:9: note: ‘total’ was declared here 2572 | Int4 total; | ^~~~~ cdentrez.c: In function ‘CdLinkUidList’: cdentrez.c:938:16: warning: ‘count’ may be used uninitialized [-Wmaybe-uninitialized] 938 | return count; | ^~~~~ cdentrez.c:926:14: note: ‘count’ was declared here 926 | Int4 count; | ^~~~~ cdentrez.c: In function ‘CdTermListByTerm’: cdentrez.c:1023:24: warning: ‘first’ may be used uninitialized [-Wmaybe-uninitialized] 1023 | the_first_page = first; | ~~~~~~~~~~~~~~~^~~~~~~ cdentrez.c:1011:15: note: ‘first’ was declared here 1011 | Int4 first; | ^~~~~ In file included from ../include/ncbi.h:62: cdentrez.c: In function ‘CdEntTLAddTerm’: ../include/ncbistr.h:281:25: warning: ‘__builtin_strncpy’ specified bound 256 equals destination size [-Wstringop-truncation] 281 | #define Nlm_StrNCpy strncpy | ^~~~~~~ ../include/ncbistr.h:307:18: note: in expansion of macro ‘Nlm_StrNCpy’ 307 | #define StrNCpy Nlm_StrNCpy | ^~~~~~~~~~~ cdentrez.c:1813:11: note: in expansion of macro ‘StrNCpy’ 1813 | StrNCpy(topOfRange, highRange, sizeof(topOfRange)); | ^~~~~~~ In function ‘FindTermNode’, inlined from ‘CdEntTLAddTerm’ at cdentrez.c:617:14: cdentrez.c:1895:24: warning: ‘total’ may be used uninitialized [-Wmaybe-uninitialized] 1895 | if (scanOk && total > 0) { | ~~~~~~~^~~~~~~~~~~~ cdentrez.c: In function ‘CdEntTLAddTerm’: cdentrez.c:1787:13: note: ‘total’ was declared here 1787 | Int4 total; | ^~~~~ cdentrez.c: In function ‘CdEntrezFindTerm’: cdentrez.c:1119:20: warning: ‘ctp’ may be used uninitialized [-Wmaybe-uninitialized] 1119 | if (ctp == NULL) | ^ cdentrez.c:1100:19: note: ‘ctp’ was declared here 1100 | CdTermPtr ctp; | ^~~ cdentrez.c: In function ‘CdEntMedlineEntryListGet’: cdentrez.c:2715:20: warning: ‘aip’ may be used uninitialized [-Wmaybe-uninitialized] 2715 | if (aip != NULL) | ^ cdentrez.c:2697:18: note: ‘aip’ was declared here 2697 | AsnIoPtr aip; | ^~~ cdentrez.c: In function ‘CdSeqSumAsnRead’: cdentrez.c:3424:34: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 3424 | sprintf (cds, " cds%d", (int) proteins); | ^ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from ../include/ncbilcl.h:154: In function ‘sprintf’, inlined from ‘CdSeqSumAsnRead’ at cdentrez.c:3424:13: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 6 and 11 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF cdromlib.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objacces.h:64, from ../include/cdromlib.h:71, from cdromlib.c:73: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF cdnewlib.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/objacces.h:64, from ../include/cdromlib.h:71, from cdnewlib.c:208: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ cdnewlib.c:600:27: warning: missing braces around initializer [-Wmissing-braces] 600 | struct CdFInfo _finfo[] = { | ^ 601 | "", 0, 0, | { } 602 | "hca", MAGIC_hca, FORMAT_hca, | { } 603 | "sum", MAGIC_sum, FORMAT_sum, | { } 604 | "lnk", MAGIC_lnk, FORMAT_lnk, | { } 605 | "ofs", MAGIC_ofs, FORMAT_ofs, | { } 606 | "oix", MAGIC_oix, FORMAT_oix, | { } 607 | "trm", MAGIC_trm, FORMAT_trm, | { } 608 | "tix", MAGIC_tix, FORMAT_tix, | { } 609 | "pst", MAGIC_pst, FORMAT_pst, | { } 610 | "inf", MAGIC_inf, FORMAT_inf | { 611 | }; | } cdnewlib.c:614:27: warning: missing braces around initializer [-Wmissing-braces] 614 | struct CdDirInfo _dir[] = { | ^ cdnewlib.c: In function ‘cd3_CdDocAsnOpen’: cdnewlib.c:1327:23: warning: unused variable ‘fdir’ [-Wunused-variable] 1327 | char *fdir = NULL; | ^~~~ cdnewlib.c: In function ‘CdDevice_Init’: cdnewlib.c:2739:13: warning: variable ‘cd_num’ set but not used [-Wunused-but-set-variable] 2739 | int cd_num; | ^~~~~~ cdnewlib.c: At top level: cdnewlib.c:3605:13: warning: ‘Cache_Purge’ defined but not used [-Wunused-function] 3605 | static void Cache_Purge (Cache *cache) | ^~~~~~~~~~~ cdnewlib.c:3592:14: warning: ‘Cache_Peek’ defined but not used [-Wunused-function] 3592 | static void* Cache_Peek (Cache *cache, long id) | ^~~~~~~~~~ cdnewlib.c:3569:12: warning: ‘Cache_Touch’ defined but not used [-Wunused-function] 3569 | static int Cache_Touch (Cache *cache, long id) | ^~~~~~~~~~~ cdnewlib.c:3506:12: warning: ‘Cache_Delete’ defined but not used [-Wunused-function] 3506 | static int Cache_Delete (Cache *cache, long id) | ^~~~~~~~~~~~ cdnewlib.c:638:18: warning: ‘_div’ defined but not used [-Wunused-variable] 638 | static DivInfo * _div; | ^~~~ cdnewlib.c:582:15: warning: ‘_empty_string’ defined but not used [-Wunused-variable] 582 | static char * _empty_string = ""; | ^~~~~~~~~~~~~ cdnewlib.c: In function ‘CdDevice_FileBuildPath.isra’: cdnewlib.c:2679:33: warning: ‘__builtin___strncat_chk’ specified bound 16 equals destination size [-Wstringop-truncation] 2679 | strncat(volname,cddev->volume->volume_name,sizeof volname); | ^ In file included from /usr/arm-linux-gnueabi/include/string.h:548, from ../include/ncbilcl.h:156: In function ‘strncat’, inlined from ‘CdDevice_FileBuildPath.isra’ at cdnewlib.c:2679:5: /usr/arm-linux-gnueabi/include/bits/string_fortified.h:138:10: warning: ‘__builtin___strncat_chk’ specified bound 16 equals destination size [-Wstringop-overflow=] 138 | return __builtin___strncat_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ cdnewlib.c: In function ‘CdDevice_Init’: cdnewlib.c:2751:17: warning: ‘__builtin___strncat_chk’ specified bound 256 equals destination size [-Wstringop-truncation] 2751 | strncat(fpath,cddev->inf.root,sizeof fpath); | ^ cdnewlib.c:2769:41: warning: ‘__builtin___strncat_chk’ specified bound 256 equals destination size [-Wstringop-truncation] 2769 | strncat(fpath,cddev->inf.root,sizeof fpath); | ^ In function ‘strncat’, inlined from ‘CdDevice_Init’ at cdnewlib.c:2751:3: /usr/arm-linux-gnueabi/include/bits/string_fortified.h:138:10: warning: ‘__builtin___strncat_chk’ specified bound 256 equals destination size [-Wstringop-overflow=] 138 | return __builtin___strncat_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncat’, inlined from ‘CdDevice_Init’ at cdnewlib.c:2769:6: /usr/arm-linux-gnueabi/include/bits/string_fortified.h:138:10: warning: ‘__builtin___strncat_chk’ specified bound 256 equals destination size [-Wstringop-overflow=] 138 | return __builtin___strncat_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ cdnewlib.c: In function ‘TrmIndex_Lookup’: cdnewlib.c:2166:19: warning: ‘d’ may be used uninitialized [-Wmaybe-uninitialized] 2166 | for ( ; d <= 0 && mid >0; --mid) | ~~^~~~ cdnewlib.c:2136:31: note: ‘d’ was declared here 2136 | int lo, hi, mid, len, d; | ^ cdnewlib.c:2166:31: warning: ‘mid’ may be used uninitialized [-Wmaybe-uninitialized] 2166 | for ( ; d <= 0 && mid >0; --mid) | ~~~~^~ cdnewlib.c:2136:21: note: ‘mid’ was declared here 2136 | int lo, hi, mid, len, d; | ^~~ cdnewlib.c:2168:41: warning: ‘term’ may be used uninitialized [-Wmaybe-uninitialized] 2168 | if (d==0 && len == (int)strlen(term)) | ^~~~~~~~~~~~ cdnewlib.c:2137:15: note: ‘term’ was declared here 2137 | char *term; | ^~~~ cdnewlib.c: In function ‘UidIndex_Lookup’: cdnewlib.c:1986:27: warning: ‘p’ may be used uninitialized [-Wmaybe-uninitialized] 1986 | page_num = (uid < *p && mid >0) ? mid-1 : mid; | ^~ cdnewlib.c:1956:22: note: ‘p’ was declared here 1956 | long *page, *p; | ^ cdnewlib.c:1986:30: warning: ‘mid’ may be used uninitialized [-Wmaybe-uninitialized] 1986 | page_num = (uid < *p && mid >0) ? mid-1 : mid; | ~~~~~~~~~~^~~~~~~~~~ cdnewlib.c:1953:21: note: ‘mid’ was declared here 1953 | int lo, hi, mid; | ^~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF casn.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from casn.c:84: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF cdconfig.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from cdconfig.c:75: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from ../include/ncbi.h:58: cdconfig.c: In function ‘ChangeMedia’: ../include/ncbistd.h:247:15: warning: statement with no effect [-Wunused-value] 247 | #define FALSE ((Nlm_Boolean)0) | ^ ../include/ncbifile.h:144:76: note: in expansion of macro ‘FALSE’ 144 | #define EjectCd(sVolume, deviceName, rawDeviceName, mountPoint, mountCmd) FALSE | ^~~~~ cdconfig.c:941:29: note: in expansion of macro ‘EjectCd’ 941 | EjectCd(toBeEjected->entrez_info->volume_label, | ^~~~~~~ ../include/ncbistd.h:247:15: warning: statement with no effect [-Wunused-value] 247 | #define FALSE ((Nlm_Boolean)0) | ^ ../include/ncbifile.h:145:76: note: in expansion of macro ‘FALSE’ 145 | #define MountCd(sVolume, deviceName, mountPoint, mountCmd) FALSE | ^~~~~ cdconfig.c:960:17: note: in expansion of macro ‘MountCd’ 960 | MountCd(newMedia->entrez_info->volume_label, cdm->device_name, | ^~~~~~~ cdconfig.c: At top level: cdconfig.c:191:17: warning: ‘UnMarkLRUineligible’ declared ‘static’ but never defined [-Wunused-function] 191 | static void UnMarkLRUineligible PROTO((void)); | ^~~~~~~~~~~~~~~~~~~ cdconfig.c: In function ‘EntrezInfoMerge’: cdconfig.c:1246:37: warning: ‘besttype’ may be used uninitialized [-Wmaybe-uninitialized] 1246 | new->types[i].num = besttype->num; | ~~~~~~~~^~~~~ cdconfig.c:1141:23: note: ‘besttype’ was declared here 1141 | EntrezTypeDataPtr besttype; | ^~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF objentr.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/asn.h:54, from ../include/cdrom.h:9, from objentr.c:102: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ objentr.c: In function ‘CdRomAsnLoad’: objentr.c:170:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 170 | if (loaded) | ^~ objentr.c:172:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 172 | loaded = TRUE; | ^~~~~~ objentr.c: In function ‘DocSumAsnRead’: objentr.c:970:16: warning: variable ‘func’ set but not used [-Wunused-but-set-variable] 970 | AsnReadFunc func; | ^~~~ objentr.c:969:12: warning: unused variable ‘isError’ [-Wunused-variable] 969 | Boolean isError = FALSE; | ^~~~~~~ objentr.c: At top level: objentr.c:806:23: warning: ‘EntrezDivInfo_Destruct’ defined but not used [-Wunused-function] 806 | static EntrezDivInfo* EntrezDivInfo_Destruct (EntrezDivInfo *div) | ^~~~~~~~~~~~~~~~~~~~~~ objentr.c:771:16: warning: ‘EntrezLinkInfo_AsnWrite’ defined but not used [-Wunused-function] 771 | static Boolean EntrezLinkInfo_AsnWrite (const EntrezLinkInfo *link, AsnIo *stream, AsnType *type) | ^~~~~~~~~~~~~~~~~~~~~~~ objentr.c: In function ‘EntrezInfoAsnRead’: objentr.c:376:25: warning: ‘tinf’ may be used uninitialized [-Wmaybe-uninitialized] 376 | EntrezTypeInfo_AsnRead(tinf++,stream,atp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ objentr.c:238:25: note: ‘tinf’ was declared here 238 | EntrezTypeInfo *tinf; | ^~~~ objentr.c:378:25: warning: ‘fld’ may be used uninitialized [-Wmaybe-uninitialized] 378 | EntrezFieldInfo_AsnRead(fld++,stream,atp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ objentr.c:239:26: note: ‘fld’ was declared here 239 | EntrezFieldInfo *fld; | ^~~ objentr.c:380:25: warning: ‘link’ may be used uninitialized [-Wmaybe-uninitialized] 380 | EntrezLinkInfo_AsnRead(link++,stream,atp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ objentr.c:240:25: note: ‘link’ was declared here 240 | EntrezLinkInfo *link; | ^~~~ In function ‘EntrezDivInfo_AsnRead’, inlined from ‘EntrezInfoAsnRead’ at objentr.c:392:4: objentr.c:818:12: warning: ‘div’ may be used uninitialized [-Wmaybe-uninitialized] 818 | if (div == NULL) | ^ objentr.c: In function ‘EntrezInfoAsnRead’: objentr.c:241:24: note: ‘div’ was declared here 241 | EntrezDivInfo *div; | ^~~ In function ‘EntrezDivInfo_AsnRead’, inlined from ‘EntrezInfoAsnRead’ at objentr.c:392:4: objentr.c:856:44: warning: ‘i’ may be used uninitialized [-Wmaybe-uninitialized] 856 | div->docs[i++] = val.intvalue; | ~^~ objentr.c: In function ‘EntrezInfoAsnRead’: objentr.c:824:21: note: ‘i’ was declared here 824 | int i; | ^ rm -f libncbicdr.a ar cru libncbicdr.a cdentrez.o cdromlib.o cdnewlib.o casn.o cdconfig.o objentr.o ar: `u' modifier ignored since `D' is the default (see `U') cp -p libncbicdr.a ../lib ranlib ../lib/libncbicdr.a arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF vibbutns.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibbutns.c:45: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vibbutns.c: In function ‘Nlm_CheckCallback’: vibbutns.c:354:20: warning: variable ‘c’ set but not used [-Wunused-but-set-variable] 354 | Nlm_ControlTool c; | ^ vibbutns.c: In function ‘Nlm_RadioCallback’: vibbutns.c:373:20: warning: variable ‘c’ set but not used [-Wunused-but-set-variable] 373 | Nlm_ControlTool c; | ^ vibbutns.c: In function ‘Nlm_SetButtonStatus’: vibbutns.c:694:20: warning: variable ‘val’ set but not used [-Wunused-but-set-variable] 694 | Nlm_Int2 val; | ^~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF vibextra.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibextra.c:87: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vibextra.c: In function ‘Nlm_RGB2HSL.constprop’: vibextra.c:1216:7: warning: ‘min’ may be used uninitialized [-Wmaybe-uninitialized] 1216 | i = (min + 1); if ( i > 2 ) i=0; | ~~^~~~~~~~~~~ vibextra.c:1191:15: note: ‘min’ was declared here 1191 | int i, min; | ^~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF vibfiles.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibfiles.c:54: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vibfiles.c: In function ‘Nlm_CardToStr’: vibfiles.c:715:19: warning: ‘%*u’ directive writing between 1 and 32768 bytes into a region of size 80 [-Wformat-overflow=] 715 | sprintf (temp, "%*u", length, (int)cardval); | ^~~ vibfiles.c:715:18: note: directive argument in the range [0, 65535] 715 | sprintf (temp, "%*u", length, (int)cardval); | ^~~~~ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from ../include/ncbilcl.h:154: In function ‘sprintf’, inlined from ‘Nlm_CardToStr’ at vibfiles.c:715:3: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 32769 bytes into a destination of size 80 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ vibfiles.c: In function ‘Nlm_IntToStr’: vibfiles.c:725:19: warning: ‘%*d’ directive writing between 1 and 32768 bytes into a region of size 80 [-Wformat-overflow=] 725 | sprintf (temp, "%*d", length, intval); | ^~~ vibfiles.c:725:18: note: directive argument in the range [-32768, 32767] 725 | sprintf (temp, "%*d", length, intval); | ^~~~~ In function ‘sprintf’, inlined from ‘Nlm_IntToStr’ at vibfiles.c:725:3: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 32769 bytes into a destination of size 80 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF vibforms.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from ../include/vibrant.h:124, from vibforms.c:44: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF vibgroup.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibgroup.c:84: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF viblists.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from viblists.c:164: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ viblists.c: In function ‘Nlm_SetListPosition’: viblists.c:1121:15: warning: variable ‘is_realized’ set but not used [-Wunused-but-set-variable] 1121 | Nlm_Boolean is_realized; | ^~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF vibmenus.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibmenus.c:43: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vibmenus.c: In function ‘Nlm_IsMenuItemChecked’: vibmenus.c:563:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 563 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_CheckMenuItem’: vibmenus.c:591:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 591 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_EnableMenuItem’: vibmenus.c:2006:17: warning: variable ‘itm’ set but not used [-Wunused-but-set-variable] 2006 | Nlm_Int2 itm; | ^~~ vibmenus.c:2005:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 2005 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_EnableChoice’: vibmenus.c:2072:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 2072 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_EnableChoiceGroup’: vibmenus.c:2122:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 2122 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_EnableChoiceItem’: vibmenus.c:2166:17: warning: variable ‘itm’ set but not used [-Wunused-but-set-variable] 2166 | Nlm_Int2 itm; | ^~~ vibmenus.c:2164:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 2164 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_DisableMenuItem’: vibmenus.c:2329:17: warning: variable ‘itm’ set but not used [-Wunused-but-set-variable] 2329 | Nlm_Int2 itm; | ^~~ vibmenus.c:2328:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 2328 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_DisableChoice’: vibmenus.c:2395:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 2395 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_DisableChoiceItem’: vibmenus.c:2489:17: warning: variable ‘itm’ set but not used [-Wunused-but-set-variable] 2489 | Nlm_Int2 itm; | ^~~ vibmenus.c:2487:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 2487 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_RemoveSubMenu’: vibmenus.c:2627:20: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 2627 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_CountMenuItems’: vibmenus.c:3056:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 3056 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_GetMenuItem’: vibmenus.c:3239:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 3239 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_GetPopListTitle’: vibmenus.c:3349:18: warning: variable ‘m’ set but not used [-Wunused-but-set-variable] 3349 | Nlm_MenU m; | ^ vibmenus.c: In function ‘Nlm_AppendItems’: vibmenus.c:3978:17: warning: unused variable ‘accel’ [-Wunused-variable] 3978 | Nlm_Char accel; | ^~~~~ vibmenus.c: In function ‘Nlm_NewPopupList’: vibmenus.c:4969:19: warning: unused variable ‘lbl’ [-Wunused-variable] 4969 | Widget lbl; | ^~~ vibmenus.c:4967:19: warning: unused variable ‘color’ [-Wunused-variable] 4967 | Pixel color; | ^~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF vibprmpt.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibprmpt.c:78: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF vibsbars.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibsbars.c:135: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF vibslate.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibslate.c:53: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vibslate.c: In function ‘Nlm_EnableSlate’: vibslate.c:1199:18: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 1199 | Nlm_SlateTool h; | ^ vibslate.c: In function ‘Nlm_DisableSlate’: vibslate.c:1254:18: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 1254 | Nlm_SlateTool h; | ^ vibslate.c: In function ‘Nlm_SelectSlate’: vibslate.c:1515:5: warning: missing sentinel in function call [-Wformat=] 1515 | XtVaGetValues (h, XmNbackground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c:1517:5: warning: missing sentinel in function call [-Wformat=] 1517 | XtVaGetValues (h, XmNforeground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c: In function ‘Nlm_SelectPanel’: vibslate.c:1544:3: warning: missing sentinel in function call [-Wformat=] 1544 | XtVaGetValues (h, XmNbackground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c:1546:3: warning: missing sentinel in function call [-Wformat=] 1546 | XtVaGetValues (h, XmNforeground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c: In function ‘Nlm_SlateClick’: vibslate.c:2026:20: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 2026 | Nlm_SlateTool h; | ^ vibslate.c: In function ‘Nlm_SlateClickCallback’: vibslate.c:2157:3: warning: missing sentinel in function call [-Wformat=] 2157 | XtVaGetValues (w, XmNbackground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c:2159:3: warning: missing sentinel in function call [-Wformat=] 2159 | XtVaGetValues (w, XmNforeground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c: In function ‘Nlm_SlateInputCallback’: vibslate.c:2313:7: warning: missing sentinel in function call [-Wformat=] 2313 | XtVaGetValues(w, XmNbackground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c:2315:7: warning: missing sentinel in function call [-Wformat=] 2315 | XtVaGetValues(w, XmNforeground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c: In function ‘Nlm_SlateDrawCallback’: vibslate.c:2359:3: warning: missing sentinel in function call [-Wformat=] 2359 | XtVaGetValues (w, XmNbackground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c:2361:3: warning: missing sentinel in function call [-Wformat=] 2361 | XtVaGetValues (w, XmNforeground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c: In function ‘Nlm_ResetPanel’: vibslate.c:1389:6: warning: ‘pdata.reset’ may be used uninitialized [-Wmaybe-uninitialized] 1389 | if (rst != NULL) { | ^ vibslate.c:1378:20: note: ‘pdata.reset’ was declared here 1378 | Nlm_PanelData pdata; | ^~~~~ vibslate.c: In function ‘Nlm_RemoveSlate’: vibslate.c:1449:6: warning: ‘pdata.click’ may be used uninitialized [-Wmaybe-uninitialized] 1449 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:1403:20: note: ‘pdata.click’ was declared here 1403 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1449:27: warning: ‘pdata.drag’ may be used uninitialized [-Wmaybe-uninitialized] 1449 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:1403:20: note: ‘pdata.drag’ was declared here 1403 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1449:49: warning: ‘pdata.hold’ may be used uninitialized [-Wmaybe-uninitialized] 1449 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:1403:20: note: ‘pdata.hold’ was declared here 1403 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1449:71: warning: ‘pdata.release’ may be used uninitialized [-Wmaybe-uninitialized] 1449 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:1403:20: note: ‘pdata.release’ was declared here 1403 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1450:29: warning: ‘pdata.draw’ may be used uninitialized [-Wmaybe-uninitialized] 1450 | pdata.release != NULL || pdata.draw != NULL || pdata.reset != NULL) { | ^ vibslate.c:1403:20: note: ‘pdata.draw’ was declared here 1403 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1450:51: warning: ‘pdata.reset’ may be used uninitialized [-Wmaybe-uninitialized] 1450 | pdata.release != NULL || pdata.draw != NULL || pdata.reset != NULL) { | ^ vibslate.c:1403:20: note: ‘pdata.reset’ was declared here 1403 | Nlm_PanelData pdata; | ^~~~~ vibslate.c: In function ‘Nlm_ResetSlate’: vibslate.c:1346:6: warning: ‘pdata.click’ may be used uninitialized [-Wmaybe-uninitialized] 1346 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:1303:20: note: ‘pdata.click’ was declared here 1303 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1346:27: warning: ‘pdata.drag’ may be used uninitialized [-Wmaybe-uninitialized] 1346 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:1303:20: note: ‘pdata.drag’ was declared here 1303 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1346:49: warning: ‘pdata.hold’ may be used uninitialized [-Wmaybe-uninitialized] 1346 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:1303:20: note: ‘pdata.hold’ was declared here 1303 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1346:71: warning: ‘pdata.release’ may be used uninitialized [-Wmaybe-uninitialized] 1346 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:1303:20: note: ‘pdata.release’ was declared here 1303 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1347:29: warning: ‘pdata.draw’ may be used uninitialized [-Wmaybe-uninitialized] 1347 | pdata.release != NULL || pdata.draw != NULL || pdata.reset != NULL) { | ^ vibslate.c:1303:20: note: ‘pdata.draw’ was declared here 1303 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1347:51: warning: ‘pdata.reset’ may be used uninitialized [-Wmaybe-uninitialized] 1347 | pdata.release != NULL || pdata.draw != NULL || pdata.reset != NULL) { | ^ vibslate.c:1303:20: note: ‘pdata.reset’ was declared here 1303 | Nlm_PanelData pdata; | ^~~~~ In function ‘Nlm_DrawSlate’, inlined from ‘Nlm_SlateDrawCallback’ at vibslate.c:2393:3: vibslate.c:2215:10: warning: ‘pdata.click’ may be used uninitialized [-Wmaybe-uninitialized] 2215 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c: In function ‘Nlm_SlateDrawCallback’: vibslate.c:2202:20: note: ‘pdata.click’ was declared here 2202 | Nlm_PanelData pdata; | ^~~~~ In function ‘Nlm_DrawSlate’, inlined from ‘Nlm_SlateDrawCallback’ at vibslate.c:2393:3: vibslate.c:2215:31: warning: ‘pdata.drag’ may be used uninitialized [-Wmaybe-uninitialized] 2215 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c: In function ‘Nlm_SlateDrawCallback’: vibslate.c:2202:20: note: ‘pdata.drag’ was declared here 2202 | Nlm_PanelData pdata; | ^~~~~ In function ‘Nlm_DrawSlate’, inlined from ‘Nlm_SlateDrawCallback’ at vibslate.c:2393:3: vibslate.c:2215:53: warning: ‘pdata.hold’ may be used uninitialized [-Wmaybe-uninitialized] 2215 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c: In function ‘Nlm_SlateDrawCallback’: vibslate.c:2202:20: note: ‘pdata.hold’ was declared here 2202 | Nlm_PanelData pdata; | ^~~~~ In function ‘Nlm_DrawSlate’, inlined from ‘Nlm_SlateDrawCallback’ at vibslate.c:2393:3: vibslate.c:2215:75: warning: ‘pdata.release’ may be used uninitialized [-Wmaybe-uninitialized] 2215 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c: In function ‘Nlm_SlateDrawCallback’: vibslate.c:2202:20: note: ‘pdata.release’ was declared here 2202 | Nlm_PanelData pdata; | ^~~~~ In function ‘Nlm_DrawSlate’, inlined from ‘Nlm_SlateDrawCallback’ at vibslate.c:2393:3: vibslate.c:2216:33: warning: ‘pdata.draw’ may be used uninitialized [-Wmaybe-uninitialized] 2216 | pdata.release != NULL || pdata.draw != NULL || pdata.reset != NULL) { | ^ vibslate.c: In function ‘Nlm_SlateDrawCallback’: vibslate.c:2202:20: note: ‘pdata.draw’ was declared here 2202 | Nlm_PanelData pdata; | ^~~~~ In function ‘Nlm_DrawSlate’, inlined from ‘Nlm_SlateDrawCallback’ at vibslate.c:2393:3: vibslate.c:2216:55: warning: ‘pdata.reset’ may be used uninitialized [-Wmaybe-uninitialized] 2216 | pdata.release != NULL || pdata.draw != NULL || pdata.reset != NULL) { | ^ vibslate.c: In function ‘Nlm_SlateDrawCallback’: vibslate.c:2202:20: note: ‘pdata.reset’ was declared here 2202 | Nlm_PanelData pdata; | ^~~~~ In function ‘Nlm_DrawSlate’, inlined from ‘Nlm_SlateDrawCallback’ at vibslate.c:2393:3: vibslate.c:2222:12: warning: ‘pdata.draw’ may be used uninitialized [-Wmaybe-uninitialized] 2222 | if (drw != NULL && Nlm_GetVisible ((Nlm_GraphiC) p)) { | ^ vibslate.c: In function ‘Nlm_SlateDrawCallback’: vibslate.c:560:18: note: ‘pdata.draw’ was declared here 560 | Nlm_PanelData pdata; | ^~~~~ vibslate.c: In function ‘Nlm_SlateClick’: vibslate.c:2048:10: warning: ‘pdata.click’ may be used uninitialized [-Wmaybe-uninitialized] 2048 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:2031:20: note: ‘pdata.click’ was declared here 2031 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:2048:31: warning: ‘pdata.drag’ may be used uninitialized [-Wmaybe-uninitialized] 2048 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:2031:20: note: ‘pdata.drag’ was declared here 2031 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:2048:53: warning: ‘pdata.hold’ may be used uninitialized [-Wmaybe-uninitialized] 2048 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:2031:20: note: ‘pdata.hold’ was declared here 2031 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:2048:75: warning: ‘pdata.release’ may be used uninitialized [-Wmaybe-uninitialized] 2048 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:2031:20: note: ‘pdata.release’ was declared here 2031 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:2049:55: warning: ‘pdata.reset’ may be used uninitialized [-Wmaybe-uninitialized] 2049 | pdata.release != NULL || pdata.draw != NULL || pdata.reset != NULL) { | ^ vibslate.c:2031:20: note: ‘pdata.reset’ was declared here 2031 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:2049:33: warning: ‘pdata.draw’ may be used uninitialized [-Wmaybe-uninitialized] 2049 | pdata.release != NULL || pdata.draw != NULL || pdata.reset != NULL) { | ^ vibslate.c:2031:20: note: ‘pdata.draw’ was declared here 2031 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:2053:12: warning: ‘pdata.click’ may be used uninitialized [-Wmaybe-uninitialized] 2053 | if (clk != NULL && Nlm_GetEnabled ((Nlm_GraphiC) p) | ^ vibslate.c:524:18: note: ‘pdata.click’ was declared here 524 | Nlm_PanelData pdata; | ^~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF vibtexts.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibtexts.c:43: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vibtexts.c: In function ‘Nlm_TextCallback’: vibtexts.c:2982:24: warning: unused variable ‘cbs’ [-Wunused-variable] 2982 | XmAnyCallbackStruct *cbs = (XmAnyCallbackStruct *)call_data; | ^~~ vibtexts.c: In function ‘Nlm_LoseFocusCallback’: vibtexts.c:2999:25: warning: variable ‘cbs’ set but not used [-Wunused-but-set-variable] 2999 | XmAnyCallbackStruct *cbs; | ^~~ vibtexts.c: In function ‘Nlm_TabCallback’: vibtexts.c:3109:15: warning: variable ‘event’ set but not used [-Wunused-but-set-variable] 3109 | XKeyEvent *event; | ^~~~~ vibtexts.c: In function ‘Nlm_HiddenReturnCallback’: vibtexts.c:3122:15: warning: variable ‘event’ set but not used [-Wunused-but-set-variable] 3122 | XKeyEvent *event; | ^~~~~ vibtexts.c: In function ‘Nlm_HiddenActivateCallback’: vibtexts.c:3135:25: warning: variable ‘cbs’ set but not used [-Wunused-but-set-variable] 3135 | XmAnyCallbackStruct *cbs; | ^~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF vibutils.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from vibutils.c:43: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF vibwndws.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibwndws.c:43: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vibwndws.c: In function ‘Nlm_SetColorMap’: vibwndws.c:1060:13: warning: variable ‘defaultdepth’ set but not used [-Wunused-but-set-variable] 1060 | int defaultdepth; | ^~~~~~~~~~~~ vibwndws.c: In function ‘Nlm_SetWindowTitle’: vibwndws.c:1567:19: warning: variable ‘wptr’ set but not used [-Wunused-but-set-variable] 1567 | Nlm_WindowTool wptr; | ^~~~ vibwndws.c: In function ‘Nlm_GetWindowTitle’: vibwndws.c:1610:19: warning: variable ‘wptr’ set but not used [-Wunused-but-set-variable] 1610 | Nlm_WindowTool wptr; | ^~~~ vibwndws.c: In function ‘Nlm_NewWindow’: vibwndws.c:2155:19: warning: variable ‘screen_num’ set but not used [-Wunused-but-set-variable] 2155 | int screen_num; | ^~~~~~~~~~ vibwndws.c: In function ‘Nlm_HideWindow’: vibwndws.c:2526:19: warning: variable ‘wptr’ set but not used [-Wunused-but-set-variable] 2526 | Nlm_WindowTool wptr; | ^~~~ vibwndws.c: In function ‘Nlm_ShowNormal’: vibwndws.c:2969:19: warning: variable ‘wptr’ set but not used [-Wunused-but-set-variable] 2969 | Nlm_WindowTool wptr; | ^~~~ vibwndws.c: In function ‘Nlm_ShowModal’: vibwndws.c:3014:19: warning: variable ‘wptr’ set but not used [-Wunused-but-set-variable] 3014 | Nlm_WindowTool wptr; | ^~~~ vibwndws.c: In function ‘Nlm_ShowDocument’: vibwndws.c:3060:19: warning: variable ‘wptr’ set but not used [-Wunused-but-set-variable] 3060 | Nlm_WindowTool wptr; | ^~~~ vibwndws.c: In function ‘Nlm_VibMainPrelude’: vibwndws.c:6800:13: warning: unused variable ‘retval’ [-Wunused-variable] 6800 | Nlm_Int2 retval; | ^~~~~~ vibwndws.c: In function ‘Nlm_RemoveDyingWindows’: vibwndws.c:6922:20: warning: variable ‘wptr’ set but not used [-Wunused-but-set-variable] 6922 | Nlm_WindowTool wptr; | ^~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF vibmain.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibmain.c:40: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF ncbidraw.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from ncbidraw.c:43: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ncbidraw.c: In function ‘Nlm_CleanUpDrawingTools’: ncbidraw.c:7540:6: warning: ‘fdata.handle’ may be used uninitialized [-Wmaybe-uninitialized] 7540 | if (fdata.handle != NULL) { | ^ ncbidraw.c:7533:17: note: ‘fdata.handle’ was declared here 7533 | Nlm_FontData fdata; | ^~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF drawing.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/ncbidraw.h:47, from drawing.c:128: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF mapping.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/ncbidraw.h:47, from mapping.c:43: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mapping.c: In function ‘Nlm_MapRectToWorldBox’: mapping.c:139:8: warning: variable ‘curScale’ set but not used [-Wunused-but-set-variable] 139 | Int4 curScale; | ^~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF picture.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/ncbidraw.h:47, from picture.c:100: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF viewer.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from ../include/vibrant.h:124, from viewer.c:120: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF document.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from ../include/vibrant.h:124, from document.c:44: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ document.c: In function ‘Nlm_PrintDocument’: document.c:4419:7: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 4419 | system (cmmd); | ^~~~~~~~~~~~~ document.c:4423:7: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 4423 | system (cmmd); | ^~~~~~~~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF table.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from ../include/vibrant.h:124, from ../include/panels.h:68, from table.c:62: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF palette.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from ../include/vibrant.h:124, from ../include/panels.h:68, from palette.c:62: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF diagnost.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from ../include/vibrant.h:124, from diagnost.c:44: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF image.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from image.c:43: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ image.c: In function ‘ShiftXMask’: image.c:840:26: warning: suggest parentheses around ‘+’ inside ‘>>’ [-Wparentheses] 840 | if(!((mask >> hi + low) & (unsigned long)1)) break; | ~~~^~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF pictur3d.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from ../include/vibrant.h:124, from ../include/pictur3d.h:49, from ../include/ppict3d.h:49, from pictur3d.c:47: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ pictur3d.c: In function ‘Nlm_DeleteFromSeg’: pictur3d.c:114:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 114 | else seg->first = b->next; | ^~~~ pictur3d.c:115:10: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 115 | if ( seg->last == b ) seg->last = bprev; | ^~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF prim3d1.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from ../include/vibrant.h:124, from prim3d1.c:46: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF prim3d2.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from ../include/vibrant.h:124, from prim3d2.c:65: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF prim3d3.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from ../include/vibrant.h:124, from prim3d3.c:46: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF prim3d4.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from ../include/vibrant.h:124, from prim3d4.c:46: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF prim3d5.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from ../include/vibrant.h:124, from prim3d5.c:66: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF viewer3d.c arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF vibmouse.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from ../include/vibrant.h:124, from vibmouse.c:67: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF netscape.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from netscape.c:62: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ netscape.c: In function ‘NS_Obtain_lock’: netscape.c:236:10: warning: variable ‘waited’ set but not used [-Wunused-but-set-variable] 236 | Bool waited = False; | ^~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF imagelst.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/imagelst.h:52, from imagelst.c:61: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF treeview.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/treemgr.h:67, from treeview.c:91: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF shim3d.c shim3d.c: In function ‘Nlm_AddHalfWorm3D’: shim3d.c:3470:46: warning: unused variable ‘tmp’ [-Wunused-variable] 3470 | *pNx, *pNy, *pNz, *pCx, *pCy, *pCz, *tmp, *fblock = NULL; | ^~~ shim3d.c:3470:40: warning: unused variable ‘pCz’ [-Wunused-variable] 3470 | *pNx, *pNy, *pNz, *pCx, *pCy, *pCz, *tmp, *fblock = NULL; | ^~~ shim3d.c:3470:34: warning: unused variable ‘pCy’ [-Wunused-variable] 3470 | *pNx, *pNy, *pNz, *pCx, *pCy, *pCz, *tmp, *fblock = NULL; | ^~~ shim3d.c:3470:28: warning: unused variable ‘pCx’ [-Wunused-variable] 3470 | *pNx, *pNy, *pNz, *pCx, *pCy, *pCz, *tmp, *fblock = NULL; | ^~~ shim3d.c:3470:22: warning: unused variable ‘pNz’ [-Wunused-variable] 3470 | *pNx, *pNy, *pNz, *pCx, *pCy, *pCz, *tmp, *fblock = NULL; | ^~~ shim3d.c:3470:16: warning: unused variable ‘pNy’ [-Wunused-variable] 3470 | *pNx, *pNy, *pNz, *pCx, *pCy, *pCz, *tmp, *fblock = NULL; | ^~~ shim3d.c:3470:10: warning: unused variable ‘pNx’ [-Wunused-variable] 3470 | *pNx, *pNy, *pNz, *pCx, *pCy, *pCz, *tmp, *fblock = NULL; | ^~~ shim3d.c:3469:47: warning: unused variable ‘Cz’ [-Wunused-variable] 3469 | GLdouble *Nx = NULL, *Ny, *Nz, *Cx, *Cy, *Cz, | ^~ shim3d.c:3469:42: warning: unused variable ‘Cy’ [-Wunused-variable] 3469 | GLdouble *Nx = NULL, *Ny, *Nz, *Cx, *Cy, *Cz, | ^~ shim3d.c:3469:37: warning: unused variable ‘Cx’ [-Wunused-variable] 3469 | GLdouble *Nx = NULL, *Ny, *Nz, *Cx, *Cy, *Cz, | ^~ shim3d.c:3469:32: warning: unused variable ‘Nz’ [-Wunused-variable] 3469 | GLdouble *Nx = NULL, *Ny, *Nz, *Cx, *Cy, *Cz, | ^~ shim3d.c:3469:27: warning: unused variable ‘Ny’ [-Wunused-variable] 3469 | GLdouble *Nx = NULL, *Ny, *Nz, *Cx, *Cy, *Cz, | ^~ shim3d.c:3469:15: warning: unused variable ‘Nx’ [-Wunused-variable] 3469 | GLdouble *Nx = NULL, *Ny, *Nz, *Cx, *Cy, *Cz, | ^~ shim3d.c:3468:21: warning: unused variable ‘pi’ [-Wunused-variable] 3468 | cosj, sinj, pi = 3.14159265358979323846; | ^~ shim3d.c:3468:15: warning: unused variable ‘sinj’ [-Wunused-variable] 3468 | cosj, sinj, pi = 3.14159265358979323846; | ^~~~ shim3d.c:3468:9: warning: unused variable ‘cosj’ [-Wunused-variable] 3468 | cosj, sinj, pi = 3.14159265358979323846; | ^~~~ shim3d.c:3467:33: warning: unused variable ‘prevlen’ [-Wunused-variable] 3467 | Hx, Hy, Hz, Vx, Vy, Vz, prevlen, | ^~~~~~~ shim3d.c:3467:29: warning: unused variable ‘Vz’ [-Wunused-variable] 3467 | Hx, Hy, Hz, Vx, Vy, Vz, prevlen, | ^~ shim3d.c:3467:25: warning: unused variable ‘Vy’ [-Wunused-variable] 3467 | Hx, Hy, Hz, Vx, Vy, Vz, prevlen, | ^~ shim3d.c:3467:21: warning: unused variable ‘Vx’ [-Wunused-variable] 3467 | Hx, Hy, Hz, Vx, Vy, Vz, prevlen, | ^~ shim3d.c:3467:17: warning: unused variable ‘Hz’ [-Wunused-variable] 3467 | Hx, Hy, Hz, Vx, Vy, Vz, prevlen, | ^~ shim3d.c:3467:13: warning: unused variable ‘Hy’ [-Wunused-variable] 3467 | Hx, Hy, Hz, Vx, Vy, Vz, prevlen, | ^~ shim3d.c:3467:9: warning: unused variable ‘Hx’ [-Wunused-variable] 3467 | Hx, Hy, Hz, Vx, Vy, Vz, prevlen, | ^~ shim3d.c:3466:21: warning: unused variable ‘dQtz’ [-Wunused-variable] 3466 | dQtx, dQty, dQtz, /*ddQtx, ddQty, ddQtz,*/ | ^~~~ shim3d.c:3466:15: warning: unused variable ‘dQty’ [-Wunused-variable] 3466 | dQtx, dQty, dQtz, /*ddQtx, ddQty, ddQtz,*/ | ^~~~ shim3d.c:3466:9: warning: unused variable ‘dQtx’ [-Wunused-variable] 3466 | dQtx, dQty, dQtz, /*ddQtx, ddQty, ddQtz,*/ | ^~~~ shim3d.c:3464:14: warning: unused variable ‘len’ [-Wunused-variable] 3464 | GLdouble len, R1x, R1y, R1z, R2x, R2y, R2z, MG[4][3], | ^~~ shim3d.c:3463:26: warning: unused variable ‘offset’ [-Wunused-variable] 3463 | Nlm_Int4 i, j, k, m, offset; | ^~~~~~ shim3d.c:3463:23: warning: unused variable ‘m’ [-Wunused-variable] 3463 | Nlm_Int4 i, j, k, m, offset; | ^ shim3d.c:3463:20: warning: unused variable ‘k’ [-Wunused-variable] 3463 | Nlm_Int4 i, j, k, m, offset; | ^ shim3d.c:3463:17: warning: unused variable ‘j’ [-Wunused-variable] 3463 | Nlm_Int4 i, j, k, m, offset; | ^ arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF odlbox.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from odlbox.c:50: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ odlbox.c: In function ‘LB_onVScroll’: odlbox.c:424:33: warning: variable ‘IsGoUp’ set but not used [-Wunused-but-set-variable] 424 | Boolean IsGoUp=FALSE; | ^~~~~~ rm -f libvibrant.a ar cru libvibrant.a vibbutns.o vibextra.o vibfiles.o vibforms.o vibgroup.o viblists.o vibmenus.o vibprmpt.o vibsbars.o vibslate.o vibtexts.o vibutils.o vibwndws.o vibmain.o ncbidraw.o drawing.o mapping.o picture.o viewer.o document.o table.o palette.o diagnost.o image.o pictur3d.o prim3d1.o prim3d2.o prim3d3.o prim3d4.o prim3d5.o viewer3d.o vibmouse.o netscape.o imagelst.o treeview.o shim3d.o odlbox.o ar: `u' modifier ignored since `D' is the default (see `U') cp -p libvibrant.a ../lib ranlib ../lib/libvibrant.a mv vibbutns.o vibbutns.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL vibbutns.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibbutns.c:45: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vibbutns.c: In function ‘Nlm_CheckCallback’: vibbutns.c:354:20: warning: variable ‘c’ set but not used [-Wunused-but-set-variable] 354 | Nlm_ControlTool c; | ^ vibbutns.c: In function ‘Nlm_RadioCallback’: vibbutns.c:373:20: warning: variable ‘c’ set but not used [-Wunused-but-set-variable] 373 | Nlm_ControlTool c; | ^ vibbutns.c: In function ‘Nlm_SetButtonStatus’: vibbutns.c:694:20: warning: variable ‘val’ set but not used [-Wunused-but-set-variable] 694 | Nlm_Int2 val; | ^~~ mv vibbutns.o vibbutns.glo mv vibbutns.tmp vibbutns.o mv vibextra.o vibextra.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL vibextra.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibextra.c:87: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vibextra.c: In function ‘Nlm_RGB2HSL.constprop’: vibextra.c:1216:7: warning: ‘min’ may be used uninitialized [-Wmaybe-uninitialized] 1216 | i = (min + 1); if ( i > 2 ) i=0; | ~~^~~~~~~~~~~ vibextra.c:1191:15: note: ‘min’ was declared here 1191 | int i, min; | ^~~ mv vibextra.o vibextra.glo mv vibextra.tmp vibextra.o mv vibfiles.o vibfiles.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL vibfiles.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibfiles.c:54: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vibfiles.c: In function ‘Nlm_CardToStr’: vibfiles.c:715:19: warning: ‘%*u’ directive writing between 1 and 32768 bytes into a region of size 80 [-Wformat-overflow=] 715 | sprintf (temp, "%*u", length, (int)cardval); | ^~~ vibfiles.c:715:18: note: directive argument in the range [0, 65535] 715 | sprintf (temp, "%*u", length, (int)cardval); | ^~~~~ In file included from /usr/arm-linux-gnueabi/include/stdio.h:980, from ../include/ncbilcl.h:154: In function ‘sprintf’, inlined from ‘Nlm_CardToStr’ at vibfiles.c:715:3: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 32769 bytes into a destination of size 80 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ vibfiles.c: In function ‘Nlm_IntToStr’: vibfiles.c:725:19: warning: ‘%*d’ directive writing between 1 and 32768 bytes into a region of size 80 [-Wformat-overflow=] 725 | sprintf (temp, "%*d", length, intval); | ^~~ vibfiles.c:725:18: note: directive argument in the range [-32768, 32767] 725 | sprintf (temp, "%*d", length, intval); | ^~~~~ In function ‘sprintf’, inlined from ‘Nlm_IntToStr’ at vibfiles.c:725:3: /usr/arm-linux-gnueabi/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 32769 bytes into a destination of size 80 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ mv vibfiles.o vibfiles.glo mv vibfiles.tmp vibfiles.o mv vibforms.o vibforms.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL vibforms.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from ../include/vibrant.h:124, from vibforms.c:44: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mv vibforms.o vibforms.glo mv vibforms.tmp vibforms.o mv vibgroup.o vibgroup.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL vibgroup.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibgroup.c:84: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mv vibgroup.o vibgroup.glo mv vibgroup.tmp vibgroup.o mv viblists.o viblists.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL viblists.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from viblists.c:164: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ viblists.c: In function ‘Nlm_SetListPosition’: viblists.c:1121:15: warning: variable ‘is_realized’ set but not used [-Wunused-but-set-variable] 1121 | Nlm_Boolean is_realized; | ^~~~~~~~~~~ mv viblists.o viblists.glo mv viblists.tmp viblists.o mv vibmenus.o vibmenus.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL vibmenus.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibmenus.c:43: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vibmenus.c: In function ‘Nlm_IsMenuItemChecked’: vibmenus.c:563:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 563 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_CheckMenuItem’: vibmenus.c:591:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 591 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_EnableMenuItem’: vibmenus.c:2006:17: warning: variable ‘itm’ set but not used [-Wunused-but-set-variable] 2006 | Nlm_Int2 itm; | ^~~ vibmenus.c:2005:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 2005 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_EnableChoice’: vibmenus.c:2072:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 2072 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_EnableChoiceGroup’: vibmenus.c:2122:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 2122 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_EnableChoiceItem’: vibmenus.c:2166:17: warning: variable ‘itm’ set but not used [-Wunused-but-set-variable] 2166 | Nlm_Int2 itm; | ^~~ vibmenus.c:2164:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 2164 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_DisableMenuItem’: vibmenus.c:2329:17: warning: variable ‘itm’ set but not used [-Wunused-but-set-variable] 2329 | Nlm_Int2 itm; | ^~~ vibmenus.c:2328:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 2328 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_DisableChoice’: vibmenus.c:2395:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 2395 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_DisableChoiceItem’: vibmenus.c:2489:17: warning: variable ‘itm’ set but not used [-Wunused-but-set-variable] 2489 | Nlm_Int2 itm; | ^~~ vibmenus.c:2487:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 2487 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_RemoveSubMenu’: vibmenus.c:2627:20: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 2627 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_CountMenuItems’: vibmenus.c:3056:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 3056 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_GetMenuItem’: vibmenus.c:3239:17: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 3239 | Nlm_MenuTool h; | ^ vibmenus.c: In function ‘Nlm_GetPopListTitle’: vibmenus.c:3349:18: warning: variable ‘m’ set but not used [-Wunused-but-set-variable] 3349 | Nlm_MenU m; | ^ vibmenus.c: In function ‘Nlm_AppendItems’: vibmenus.c:3978:17: warning: unused variable ‘accel’ [-Wunused-variable] 3978 | Nlm_Char accel; | ^~~~~ vibmenus.c: In function ‘Nlm_NewPopupList’: vibmenus.c:4969:19: warning: unused variable ‘lbl’ [-Wunused-variable] 4969 | Widget lbl; | ^~~ vibmenus.c:4967:19: warning: unused variable ‘color’ [-Wunused-variable] 4967 | Pixel color; | ^~~~~ mv vibmenus.o vibmenus.glo mv vibmenus.tmp vibmenus.o mv vibprmpt.o vibprmpt.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL vibprmpt.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibprmpt.c:78: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mv vibprmpt.o vibprmpt.glo mv vibprmpt.tmp vibprmpt.o mv vibsbars.o vibsbars.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL vibsbars.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibsbars.c:135: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mv vibsbars.o vibsbars.glo mv vibsbars.tmp vibsbars.o mv vibslate.o vibslate.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL vibslate.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibslate.c:53: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vibslate.c: In function ‘Nlm_EnableSlate’: vibslate.c:1199:18: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 1199 | Nlm_SlateTool h; | ^ vibslate.c: In function ‘Nlm_DisableSlate’: vibslate.c:1254:18: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 1254 | Nlm_SlateTool h; | ^ vibslate.c: In function ‘Nlm_SelectSlate’: vibslate.c:1515:5: warning: missing sentinel in function call [-Wformat=] 1515 | XtVaGetValues (h, XmNbackground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c:1517:5: warning: missing sentinel in function call [-Wformat=] 1517 | XtVaGetValues (h, XmNforeground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c: In function ‘Nlm_SelectPanel’: vibslate.c:1544:3: warning: missing sentinel in function call [-Wformat=] 1544 | XtVaGetValues (h, XmNbackground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c:1546:3: warning: missing sentinel in function call [-Wformat=] 1546 | XtVaGetValues (h, XmNforeground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c: In function ‘Nlm_SlateClick’: vibslate.c:2026:20: warning: variable ‘h’ set but not used [-Wunused-but-set-variable] 2026 | Nlm_SlateTool h; | ^ vibslate.c: In function ‘Nlm_SlateClickCallback’: vibslate.c:2157:3: warning: missing sentinel in function call [-Wformat=] 2157 | XtVaGetValues (w, XmNbackground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c:2159:3: warning: missing sentinel in function call [-Wformat=] 2159 | XtVaGetValues (w, XmNforeground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c: In function ‘Nlm_SlateInputCallback’: vibslate.c:2313:7: warning: missing sentinel in function call [-Wformat=] 2313 | XtVaGetValues(w, XmNbackground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c:2315:7: warning: missing sentinel in function call [-Wformat=] 2315 | XtVaGetValues(w, XmNforeground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c: In function ‘Nlm_SlateDrawCallback’: vibslate.c:2359:3: warning: missing sentinel in function call [-Wformat=] 2359 | XtVaGetValues (w, XmNbackground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c:2361:3: warning: missing sentinel in function call [-Wformat=] 2361 | XtVaGetValues (w, XmNforeground, &color, 0); | ^~~~~~~~~~~~~ vibslate.c: In function ‘Nlm_Set3DColorMap’: vibslate.c:2686:17: warning: unused variable ‘testvisual’ [-Wunused-variable] 2686 | Boolean testvisual; | ^~~~~~~~~~ vibslate.c:2685:13: warning: variable ‘defaultdepth’ set but not used [-Wunused-but-set-variable] 2685 | int defaultdepth; | ^~~~~~~~~~~~ vibslate.c: In function ‘Nlm_ResetPanel’: vibslate.c:1389:6: warning: ‘pdata.reset’ may be used uninitialized [-Wmaybe-uninitialized] 1389 | if (rst != NULL) { | ^ vibslate.c:1378:20: note: ‘pdata.reset’ was declared here 1378 | Nlm_PanelData pdata; | ^~~~~ vibslate.c: In function ‘Nlm_RemoveSlate’: vibslate.c:1449:6: warning: ‘pdata.click’ may be used uninitialized [-Wmaybe-uninitialized] 1449 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:1403:20: note: ‘pdata.click’ was declared here 1403 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1449:27: warning: ‘pdata.drag’ may be used uninitialized [-Wmaybe-uninitialized] 1449 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:1403:20: note: ‘pdata.drag’ was declared here 1403 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1449:49: warning: ‘pdata.hold’ may be used uninitialized [-Wmaybe-uninitialized] 1449 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:1403:20: note: ‘pdata.hold’ was declared here 1403 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1449:71: warning: ‘pdata.release’ may be used uninitialized [-Wmaybe-uninitialized] 1449 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:1403:20: note: ‘pdata.release’ was declared here 1403 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1450:29: warning: ‘pdata.draw’ may be used uninitialized [-Wmaybe-uninitialized] 1450 | pdata.release != NULL || pdata.draw != NULL || pdata.reset != NULL) { | ^ vibslate.c:1403:20: note: ‘pdata.draw’ was declared here 1403 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1450:51: warning: ‘pdata.reset’ may be used uninitialized [-Wmaybe-uninitialized] 1450 | pdata.release != NULL || pdata.draw != NULL || pdata.reset != NULL) { | ^ vibslate.c:1403:20: note: ‘pdata.reset’ was declared here 1403 | Nlm_PanelData pdata; | ^~~~~ vibslate.c: In function ‘Nlm_ResetSlate’: vibslate.c:1346:6: warning: ‘pdata.click’ may be used uninitialized [-Wmaybe-uninitialized] 1346 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:1303:20: note: ‘pdata.click’ was declared here 1303 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1346:27: warning: ‘pdata.drag’ may be used uninitialized [-Wmaybe-uninitialized] 1346 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:1303:20: note: ‘pdata.drag’ was declared here 1303 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1346:49: warning: ‘pdata.hold’ may be used uninitialized [-Wmaybe-uninitialized] 1346 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:1303:20: note: ‘pdata.hold’ was declared here 1303 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1346:71: warning: ‘pdata.release’ may be used uninitialized [-Wmaybe-uninitialized] 1346 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:1303:20: note: ‘pdata.release’ was declared here 1303 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1347:29: warning: ‘pdata.draw’ may be used uninitialized [-Wmaybe-uninitialized] 1347 | pdata.release != NULL || pdata.draw != NULL || pdata.reset != NULL) { | ^ vibslate.c:1303:20: note: ‘pdata.draw’ was declared here 1303 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:1347:51: warning: ‘pdata.reset’ may be used uninitialized [-Wmaybe-uninitialized] 1347 | pdata.release != NULL || pdata.draw != NULL || pdata.reset != NULL) { | ^ vibslate.c:1303:20: note: ‘pdata.reset’ was declared here 1303 | Nlm_PanelData pdata; | ^~~~~ In function ‘Nlm_DrawSlate’, inlined from ‘Nlm_SlateDrawCallback’ at vibslate.c:2393:3: vibslate.c:2215:10: warning: ‘pdata.click’ may be used uninitialized [-Wmaybe-uninitialized] 2215 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c: In function ‘Nlm_SlateDrawCallback’: vibslate.c:2202:20: note: ‘pdata.click’ was declared here 2202 | Nlm_PanelData pdata; | ^~~~~ In function ‘Nlm_DrawSlate’, inlined from ‘Nlm_SlateDrawCallback’ at vibslate.c:2393:3: vibslate.c:2215:31: warning: ‘pdata.drag’ may be used uninitialized [-Wmaybe-uninitialized] 2215 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c: In function ‘Nlm_SlateDrawCallback’: vibslate.c:2202:20: note: ‘pdata.drag’ was declared here 2202 | Nlm_PanelData pdata; | ^~~~~ In function ‘Nlm_DrawSlate’, inlined from ‘Nlm_SlateDrawCallback’ at vibslate.c:2393:3: vibslate.c:2215:53: warning: ‘pdata.hold’ may be used uninitialized [-Wmaybe-uninitialized] 2215 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c: In function ‘Nlm_SlateDrawCallback’: vibslate.c:2202:20: note: ‘pdata.hold’ was declared here 2202 | Nlm_PanelData pdata; | ^~~~~ In function ‘Nlm_DrawSlate’, inlined from ‘Nlm_SlateDrawCallback’ at vibslate.c:2393:3: vibslate.c:2215:75: warning: ‘pdata.release’ may be used uninitialized [-Wmaybe-uninitialized] 2215 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c: In function ‘Nlm_SlateDrawCallback’: vibslate.c:2202:20: note: ‘pdata.release’ was declared here 2202 | Nlm_PanelData pdata; | ^~~~~ In function ‘Nlm_DrawSlate’, inlined from ‘Nlm_SlateDrawCallback’ at vibslate.c:2393:3: vibslate.c:2216:33: warning: ‘pdata.draw’ may be used uninitialized [-Wmaybe-uninitialized] 2216 | pdata.release != NULL || pdata.draw != NULL || pdata.reset != NULL) { | ^ vibslate.c: In function ‘Nlm_SlateDrawCallback’: vibslate.c:2202:20: note: ‘pdata.draw’ was declared here 2202 | Nlm_PanelData pdata; | ^~~~~ In function ‘Nlm_DrawSlate’, inlined from ‘Nlm_SlateDrawCallback’ at vibslate.c:2393:3: vibslate.c:2216:55: warning: ‘pdata.reset’ may be used uninitialized [-Wmaybe-uninitialized] 2216 | pdata.release != NULL || pdata.draw != NULL || pdata.reset != NULL) { | ^ vibslate.c: In function ‘Nlm_SlateDrawCallback’: vibslate.c:2202:20: note: ‘pdata.reset’ was declared here 2202 | Nlm_PanelData pdata; | ^~~~~ In function ‘Nlm_DrawSlate’, inlined from ‘Nlm_SlateDrawCallback’ at vibslate.c:2393:3: vibslate.c:2222:12: warning: ‘pdata.draw’ may be used uninitialized [-Wmaybe-uninitialized] 2222 | if (drw != NULL && Nlm_GetVisible ((Nlm_GraphiC) p)) { | ^ vibslate.c: In function ‘Nlm_SlateDrawCallback’: vibslate.c:560:18: note: ‘pdata.draw’ was declared here 560 | Nlm_PanelData pdata; | ^~~~~ vibslate.c: In function ‘Nlm_SlateClick’: vibslate.c:2048:10: warning: ‘pdata.click’ may be used uninitialized [-Wmaybe-uninitialized] 2048 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:2031:20: note: ‘pdata.click’ was declared here 2031 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:2048:31: warning: ‘pdata.drag’ may be used uninitialized [-Wmaybe-uninitialized] 2048 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:2031:20: note: ‘pdata.drag’ was declared here 2031 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:2048:53: warning: ‘pdata.hold’ may be used uninitialized [-Wmaybe-uninitialized] 2048 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:2031:20: note: ‘pdata.hold’ was declared here 2031 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:2048:75: warning: ‘pdata.release’ may be used uninitialized [-Wmaybe-uninitialized] 2048 | if (pdata.click != NULL || pdata.drag != NULL || pdata.hold != NULL || | ^ vibslate.c:2031:20: note: ‘pdata.release’ was declared here 2031 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:2049:55: warning: ‘pdata.reset’ may be used uninitialized [-Wmaybe-uninitialized] 2049 | pdata.release != NULL || pdata.draw != NULL || pdata.reset != NULL) { | ^ vibslate.c:2031:20: note: ‘pdata.reset’ was declared here 2031 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:2049:33: warning: ‘pdata.draw’ may be used uninitialized [-Wmaybe-uninitialized] 2049 | pdata.release != NULL || pdata.draw != NULL || pdata.reset != NULL) { | ^ vibslate.c:2031:20: note: ‘pdata.draw’ was declared here 2031 | Nlm_PanelData pdata; | ^~~~~ vibslate.c:2053:12: warning: ‘pdata.click’ may be used uninitialized [-Wmaybe-uninitialized] 2053 | if (clk != NULL && Nlm_GetEnabled ((Nlm_GraphiC) p) | ^ vibslate.c:524:18: note: ‘pdata.click’ was declared here 524 | Nlm_PanelData pdata; | ^~~~~ mv vibslate.o vibslate.glo mv vibslate.tmp vibslate.o mv vibtexts.o vibtexts.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL vibtexts.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibtexts.c:43: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vibtexts.c: In function ‘Nlm_TextCallback’: vibtexts.c:2982:24: warning: unused variable ‘cbs’ [-Wunused-variable] 2982 | XmAnyCallbackStruct *cbs = (XmAnyCallbackStruct *)call_data; | ^~~ vibtexts.c: In function ‘Nlm_LoseFocusCallback’: vibtexts.c:2999:25: warning: variable ‘cbs’ set but not used [-Wunused-but-set-variable] 2999 | XmAnyCallbackStruct *cbs; | ^~~ vibtexts.c: In function ‘Nlm_TabCallback’: vibtexts.c:3109:15: warning: variable ‘event’ set but not used [-Wunused-but-set-variable] 3109 | XKeyEvent *event; | ^~~~~ vibtexts.c: In function ‘Nlm_HiddenReturnCallback’: vibtexts.c:3122:15: warning: variable ‘event’ set but not used [-Wunused-but-set-variable] 3122 | XKeyEvent *event; | ^~~~~ vibtexts.c: In function ‘Nlm_HiddenActivateCallback’: vibtexts.c:3135:25: warning: variable ‘cbs’ set but not used [-Wunused-but-set-variable] 3135 | XmAnyCallbackStruct *cbs; | ^~~ mv vibtexts.o vibtexts.glo mv vibtexts.tmp vibtexts.o mv vibutils.o vibutils.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL vibutils.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from vibutils.c:43: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mv vibutils.o vibutils.glo mv vibutils.tmp vibutils.o mv vibwndws.o vibwndws.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL vibwndws.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibwndws.c:43: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vibwndws.c: In function ‘Nlm_SetColorMap’: vibwndws.c:1060:13: warning: variable ‘defaultdepth’ set but not used [-Wunused-but-set-variable] 1060 | int defaultdepth; | ^~~~~~~~~~~~ vibwndws.c: In function ‘Nlm_SetWindowTitle’: vibwndws.c:1567:19: warning: variable ‘wptr’ set but not used [-Wunused-but-set-variable] 1567 | Nlm_WindowTool wptr; | ^~~~ vibwndws.c: In function ‘Nlm_GetWindowTitle’: vibwndws.c:1610:19: warning: variable ‘wptr’ set but not used [-Wunused-but-set-variable] 1610 | Nlm_WindowTool wptr; | ^~~~ vibwndws.c: In function ‘Nlm_NewWindow’: vibwndws.c:2155:19: warning: variable ‘screen_num’ set but not used [-Wunused-but-set-variable] 2155 | int screen_num; | ^~~~~~~~~~ vibwndws.c: In function ‘Nlm_HideWindow’: vibwndws.c:2526:19: warning: variable ‘wptr’ set but not used [-Wunused-but-set-variable] 2526 | Nlm_WindowTool wptr; | ^~~~ vibwndws.c: In function ‘Nlm_ShowNormal’: vibwndws.c:2969:19: warning: variable ‘wptr’ set but not used [-Wunused-but-set-variable] 2969 | Nlm_WindowTool wptr; | ^~~~ vibwndws.c: In function ‘Nlm_ShowModal’: vibwndws.c:3014:19: warning: variable ‘wptr’ set but not used [-Wunused-but-set-variable] 3014 | Nlm_WindowTool wptr; | ^~~~ vibwndws.c: In function ‘Nlm_ShowDocument’: vibwndws.c:3060:19: warning: variable ‘wptr’ set but not used [-Wunused-but-set-variable] 3060 | Nlm_WindowTool wptr; | ^~~~ vibwndws.c: In function ‘Nlm_VibMainPrelude’: vibwndws.c:6800:13: warning: unused variable ‘retval’ [-Wunused-variable] 6800 | Nlm_Int2 retval; | ^~~~~~ vibwndws.c: In function ‘Nlm_RemoveDyingWindows’: vibwndws.c:6922:20: warning: variable ‘wptr’ set but not used [-Wunused-but-set-variable] 6922 | Nlm_WindowTool wptr; | ^~~~ vibwndws.c: At top level: vibwndws.c:1318:16: warning: ‘Nlm_StandardColormap’ defined but not used [-Wunused-function] 1318 | static Boolean Nlm_StandardColormap(Colormap *cMap, | ^~~~~~~~~~~~~~~~~~~~ mv vibwndws.o vibwndws.glo mv vibwndws.tmp vibwndws.o mv vibmain.o vibmain.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL vibmain.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from vibmain.c:40: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mv vibmain.o vibmain.glo mv vibmain.tmp vibmain.o mv ncbidraw.o ncbidraw.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL ncbidraw.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from ncbidraw.c:43: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ncbidraw.c: In function ‘Nlm_CleanUpDrawingTools’: ncbidraw.c:7540:6: warning: ‘fdata.handle’ may be used uninitialized [-Wmaybe-uninitialized] 7540 | if (fdata.handle != NULL) { | ^ ncbidraw.c:7533:17: note: ‘fdata.handle’ was declared here 7533 | Nlm_FontData fdata; | ^~~~~ mv ncbidraw.o ncbidraw.glo mv ncbidraw.tmp ncbidraw.o mv drawing.o drawing.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL drawing.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/ncbidraw.h:47, from drawing.c:128: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mv drawing.o drawing.glo mv drawing.tmp drawing.o mv mapping.o mapping.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL mapping.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/ncbidraw.h:47, from mapping.c:43: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mapping.c: In function ‘Nlm_MapRectToWorldBox’: mapping.c:139:8: warning: variable ‘curScale’ set but not used [-Wunused-but-set-variable] 139 | Int4 curScale; | ^~~~~~~~ mv mapping.o mapping.glo mv mapping.tmp mapping.o mv picture.o picture.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL picture.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/ncbidraw.h:47, from picture.c:100: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mv picture.o picture.glo mv picture.tmp picture.o mv viewer.o viewer.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL viewer.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from ../include/vibrant.h:124, from viewer.c:120: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mv viewer.o viewer.glo mv viewer.tmp viewer.o mv document.o document.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PNG -I../include -DWIN_MOTIF -D_OPENGL document.c In file included from /usr/arm-linux-gnueabi/include/sys/types.h:25, from ../include/ncbilcl.h:150, from ../include/ncbi.h:57, from ../include/vibtypes.h:94, from ../include/vibrant.h:124, from document.c:44: /usr/arm-linux-gnueabi/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ document.c: In function ‘Nlm_PrintDocument’: document.c:4419:7: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 4419 | system (cmmd); | ^~~~~~~~~~~~~ document.c:4423:7: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 4423 | system (cmmd); | ^~~~~~~~~~~~~ mv document.o document.glo mv document.tmp document.o mv table.o table.tmp arm-linux-gnueabi-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS