sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | pbseqlib 5.3.3+dfsg-4 (arm64) Thu, 30 Jan 2020 07:05:35 +0000 | +==============================================================================+ Package: pbseqlib Version: 5.3.3+dfsg-4 Source Version: 5.3.3+dfsg-4 Distribution: unstable Machine Architecture: amd64 Host Architecture: arm64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-2977ce90-a7ba-4a89-aba4-a9684a6d7c01' with '<>' I: NOTICE: Log filtering will replace 'build/pbseqlib-O84uL9/resolver-onofAU' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://debian.oregonstate.edu/debian unstable InRelease Get:2 http://debian.oregonstate.edu/debian unstable/main arm64 Packages [8055 kB] Fetched 8055 kB in 2s (3685 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'pbseqlib' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/pbseqlib.git Please use: git clone https://salsa.debian.org/med-team/pbseqlib.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 982 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main pbseqlib 5.3.3+dfsg-4 (dsc) [2429 B] Get:2 http://debian.oregonstate.edu/debian unstable/main pbseqlib 5.3.3+dfsg-4 (tar) [970 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main pbseqlib 5.3.3+dfsg-4 (diff) [8976 B] Fetched 982 kB in 0s (6496 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/pbseqlib-O84uL9/pbseqlib-5.3.3+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/pbseqlib-O84uL9' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), meson, pkg-config, cmake, googletest, libgtest-dev, zlib1g-dev, libhdf5-dev, libboost-dev, libpbbam-dev (>= 0.18.0+dfsg-1~), libpbcopper-dev, libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 Filtered Build-Depends: debhelper-compat (= 12), meson, pkg-config, cmake, googletest, libgtest-dev, zlib1g-dev, libhdf5-dev, libboost-dev, libpbbam-dev (>= 0.18.0+dfsg-1~), libpbcopper-dev, libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [484 B] Get:5 copy:/<>/apt_archive ./ Packages [575 B] Fetched 2016 B in 0s (106 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdmainutils build-essential cmake cmake-data cpp-9-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-9-aarch64-linux-gnu gcc-9-aarch64-linux-gnu-base gcc-9-base:arm64 gcc-9-cross-base gcc-aarch64-linux-gnu gettext gettext-base googletest groff-base hdf5-helpers:arm64 intltool-debian libaec-dev:arm64 libaec0:arm64 libarchive-zip-perl libarchive13 libasan5:arm64 libasan5-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libboost-dev:arm64 libboost1.67-dev:arm64 libbrotli1 libbrotli1:arm64 libbsd0 libbz2-1.0:arm64 libc6:arm64 libc6-arm64-cross libc6-dev libc6-dev:arm64 libc6-dev-arm64-cross libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:arm64 libcrypt1:arm64 libcurl3-gnutls:arm64 libcurl4 libdb5.3:arm64 libdebhelper-perl libdebian-dpkgcross-perl libdeflate0:arm64 libelf1 libexpat1 libffi7:arm64 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:arm64 libgcc-9-dev-arm64-cross libgcc1:arm64 libgcc1-arm64-cross libgcrypt20:arm64 libgfortran5:arm64 libglib2.0-0 libgmp10:arm64 libgnutls30:arm64 libgomp1:arm64 libgomp1-arm64-cross libgpg-error0:arm64 libgssapi-krb5-2 libgssapi-krb5-2:arm64 libgtest-dev:arm64 libhdf5-103:arm64 libhdf5-cpp-103:arm64 libhdf5-dev:arm64 libhogweed5:arm64 libhts-dev:arm64 libhts3:arm64 libicu63 libidn2-0:arm64 libio-string-perl libitm1:arm64 libitm1-arm64-cross libjpeg62-turbo:arm64 libjpeg62-turbo-dev:arm64 libjsoncpp1 libk5crypto3 libk5crypto3:arm64 libkeyutils1 libkeyutils1:arm64 libkrb5-3 libkrb5-3:arm64 libkrb5support0 libkrb5support0:arm64 libldap-2.4-2 libldap-2.4-2:arm64 libldap-common liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross liblzma-dev:arm64 liblzma5:arm64 libmagic-mgc libmagic1 libmpdec2 libncurses6 libnettle7:arm64 libnghttp2-14 libnghttp2-14:arm64 libp11-kit0:arm64 libpbbam-dev:arm64 libpbbam1.0.6:arm64 libpbcopper-dev:arm64 libpbcopper1.3.0:arm64 libpipeline1 libprocps7 libpsl5 libpsl5:arm64 libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libreadline8 librhash0 librtmp1 librtmp1:arm64 libsasl2-2 libsasl2-2:arm64 libsasl2-modules-db libsasl2-modules-db:arm64 libsigsegv2 libsqlite3-0 libssh2-1 libssh2-1:arm64 libssl-dev:arm64 libssl1.1 libssl1.1:arm64 libstdc++-9-dev libstdc++-9-dev:arm64 libstdc++-9-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libsz2:arm64 libtasn1-6:arm64 libtool libtsan0:arm64 libtsan0-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libunistring2:arm64 libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db meson mime-support ninja-build pkg-config po-debconf procps python3 python3-minimal python3.7 python3.7-minimal readline-common sensible-utils ucf zlib1g:arm64 zlib1g-dev:arm64 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican | wordlist whois vacation cmake-doc gcc-9-locales cpp-doc dh-make binutils-multiarch g++-multilib g++-9-multilib gcc-9-doc manpages-dev flex bison gdb-aarch64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libboost-doc:arm64 libboost1.67-doc:arm64 libboost-atomic1.67-dev:arm64 libboost-chrono1.67-dev:arm64 libboost-container1.67-dev:arm64 libboost-context1.67-dev:arm64 libboost-contract1.67-dev:arm64 libboost-coroutine1.67-dev:arm64 libboost-date-time1.67-dev:arm64 libboost-exception1.67-dev:arm64 libboost-fiber1.67-dev:arm64 libboost-filesystem1.67-dev:arm64 libboost-graph1.67-dev:arm64 libboost-graph-parallel1.67-dev:arm64 libboost-iostreams1.67-dev:arm64 libboost-locale1.67-dev:arm64 libboost-log1.67-dev:arm64 libboost-math1.67-dev:arm64 libboost-mpi1.67-dev:arm64 libboost-mpi-python1.67-dev:arm64 libboost-numpy1.67-dev:arm64 libboost-program-options1.67-dev:arm64 libboost-python1.67-dev:arm64 libboost-random1.67-dev:arm64 libboost-regex1.67-dev:arm64 libboost-serialization1.67-dev:arm64 libboost-signals1.67-dev:arm64 libboost-stacktrace1.67-dev:arm64 libboost-system1.67-dev:arm64 libboost-test1.67-dev:arm64 libboost-thread1.67-dev:arm64 libboost-timer1.67-dev:arm64 libboost-type-erasure1.67-dev:arm64 libboost-wave1.67-dev:arm64 libboost1.67-tools-dev:arm64 libmpfrc++-dev:arm64 libntl-dev:arm64 glibc-doc:arm64 libc-l10n:arm64 locales:arm64 glibc-doc manpages-dev:arm64 rng-tools:arm64 gnutls-bin:arm64 krb5-doc krb5-user krb5-doc:arm64 krb5-user:arm64 libhdf5-doc:arm64 liblzma-doc:arm64 libssl-doc:arm64 libstdc++-9-doc libstdc++-9-doc:arm64 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python3.7-venv python3.7-doc binfmt-support readline-doc Recommended packages: curl | wget | lynx ca-certificates:arm64 ca-certificates libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpg-error-l10n:arm64 krb5-locales krb5-locales:arm64 libgpm2 publicsuffix publicsuffix:arm64 libsasl2-modules libsasl2-modules:arm64 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdmainutils build-essential cmake cmake-data cpp-9-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-9-aarch64-linux-gnu gcc-9-aarch64-linux-gnu-base gcc-9-base:arm64 gcc-9-cross-base gcc-aarch64-linux-gnu gettext gettext-base googletest groff-base hdf5-helpers:arm64 intltool-debian libaec-dev:arm64 libaec0:arm64 libarchive-zip-perl libarchive13 libasan5:arm64 libasan5-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libboost-dev:arm64 libboost1.67-dev:arm64 libbrotli1 libbrotli1:arm64 libbsd0 libbz2-1.0:arm64 libc6:arm64 libc6-arm64-cross libc6-dev libc6-dev:arm64 libc6-dev-arm64-cross libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:arm64 libcrypt1:arm64 libcurl3-gnutls:arm64 libcurl4 libdb5.3:arm64 libdebhelper-perl libdebian-dpkgcross-perl libdeflate0:arm64 libelf1 libexpat1 libffi7:arm64 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:arm64 libgcc-9-dev-arm64-cross libgcc1:arm64 libgcc1-arm64-cross libgcrypt20:arm64 libgfortran5:arm64 libglib2.0-0 libgmp10:arm64 libgnutls30:arm64 libgomp1:arm64 libgomp1-arm64-cross libgpg-error0:arm64 libgssapi-krb5-2 libgssapi-krb5-2:arm64 libgtest-dev:arm64 libhdf5-103:arm64 libhdf5-cpp-103:arm64 libhdf5-dev:arm64 libhogweed5:arm64 libhts-dev:arm64 libhts3:arm64 libicu63 libidn2-0:arm64 libio-string-perl libitm1:arm64 libitm1-arm64-cross libjpeg62-turbo:arm64 libjpeg62-turbo-dev:arm64 libjsoncpp1 libk5crypto3 libk5crypto3:arm64 libkeyutils1 libkeyutils1:arm64 libkrb5-3 libkrb5-3:arm64 libkrb5support0 libkrb5support0:arm64 libldap-2.4-2 libldap-2.4-2:arm64 libldap-common liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross liblzma-dev:arm64 liblzma5:arm64 libmagic-mgc libmagic1 libmpdec2 libncurses6 libnettle7:arm64 libnghttp2-14 libnghttp2-14:arm64 libp11-kit0:arm64 libpbbam-dev:arm64 libpbbam1.0.6:arm64 libpbcopper-dev:arm64 libpbcopper1.3.0:arm64 libpipeline1 libprocps7 libpsl5 libpsl5:arm64 libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libreadline8 librhash0 librtmp1 librtmp1:arm64 libsasl2-2 libsasl2-2:arm64 libsasl2-modules-db libsasl2-modules-db:arm64 libsigsegv2 libsqlite3-0 libssh2-1 libssh2-1:arm64 libssl-dev:arm64 libssl1.1 libssl1.1:arm64 libstdc++-9-dev libstdc++-9-dev:arm64 libstdc++-9-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libsz2:arm64 libtasn1-6:arm64 libtool libtsan0:arm64 libtsan0-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libunistring2:arm64 libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db meson mime-support ninja-build pkg-config po-debconf procps python3 python3-minimal python3.7 python3.7-minimal readline-common sbuild-build-depends-main-dummy:arm64 sensible-utils ucf zlib1g:arm64 zlib1g-dev:arm64 0 upgraded, 194 newly installed, 0 to remove and 0 not upgraded. Need to get 124 MB of archives. After this operation, 599 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1000 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-4 [919 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.2-2 [33.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.0-2 [1307 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1d-2 [1540 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.7-minimal amd64 3.7.6-1+b1 [591 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.2.9-1 [94.3 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 python3.7-minimal amd64 3.7.6-1+b1 [1813 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 python3-minimal amd64 3.7.5-3 [36.8 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 mime-support all 3.64 [37.8 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmpdec2 amd64 2.4.2-2 [87.2 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-3 [72.5 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-3 [160 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.31.0+really3.30.1+fossil191229-1 [655 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.7-stdlib amd64 3.7.6-1+b1 [1735 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 python3.7 amd64 3.7.6-1+b1 [351 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3-stdlib amd64 3.7.5-3 [20.2 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 python3 amd64 3.7.5-3 [62.1 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-9-base arm64 9.2.1-25 [195 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20191019-1 [102 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libprocps7 amd64 2:3.3.15-2+b1 [62.0 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 procps amd64 2:3.3.15-2+b1 [259 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-4 [262 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-4 [120 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-4 [67.9 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-aarch64-linux-gnu amd64 2.33.90.20200122-2 [2787 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.10-10 [104 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.29-9 [2636 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev amd64 9.2.1-25 [1677 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9 amd64 9.2.1-25 [10.7 MB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:9.2.1-3.1 [1644 B] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 cmake-data all 3.15.4-1 [1580 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-2 [8301 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-8 [710 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive13 amd64 3.4.0-1+b1 [335 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libbrotli1 amd64 1.0.7-6 [266 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libkeyutils1 amd64 1.6-6 [15.0 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5support0 amd64 1.17-6 [64.6 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libk5crypto3 amd64 1.17-6 [116 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5-3 amd64 1.17-6 [366 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.17-6 [156 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2 [69.0 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2 [106 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-common all 2.4.48+dfsg-1 [90.8 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-2.4-2 amd64 2.4.48+dfsg-1+b2 [225 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libnghttp2-14 amd64 1.40.0-1 [85.0 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libpsl5 amd64 0.20.2-2 [53.7 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b1 [60.8 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libssh2-1 amd64 1.8.0-2.1 [140 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libcurl4 amd64 7.67.0-2 [321 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3.1 [77.6 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 librhash0 amd64 1.3.9-1 [123 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libuv1 amd64 1.33.1-2 [125 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 cmake amd64 3.15.4-1 [3568 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-aarch64-linux-gnu-base amd64 9.2.1-21cross1 [195 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-aarch64-linux-gnu amd64 9.2.1-21cross1 [6540 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-aarch64-linux-gnu amd64 4:9.2.1-3.1 [16.7 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base all 9.2.1-21cross1 [190 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-arm64-cross all 2.29-9cross1 [1242 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-arm64-cross all 1:9.2.1-21cross1 [34.1 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-arm64-cross all 9.2.1-21cross1 [76.5 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-arm64-cross all 9.2.1-21cross1 [24.2 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-arm64-cross all 9.2.1-21cross1 [8584 B] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-arm64-cross all 9.2.1-21cross1 [347 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0-arm64-cross all 9.2.1-21cross1 [121 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0-arm64-cross all 9.2.1-21cross1 [267 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-arm64-cross all 9.2.1-21cross1 [415 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-arm64-cross all 9.2.1-21cross1 [117 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-arm64-cross all 9.2.1-21cross1 [885 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-aarch64-linux-gnu amd64 9.2.1-21cross1 [6908 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-aarch64-linux-gnu amd64 4:9.2.1-3.1 [1460 B] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-arm64-cross all 5.4.8-1cross1 [1126 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-arm64-cross all 2.29-9cross1 [2263 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-arm64-cross all 9.2.1-21cross1 [1635 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-aarch64-linux-gnu amd64 9.2.1-21cross1 [7120 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 g++-aarch64-linux-gnu amd64 4:9.2.1-3.1 [1180 B] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000002-1 [52.0 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1+b1 [344 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-arm64 all 12.8 [6644 B] Get:106 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-11 [547 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 12.9 [183 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.67-1 [104 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.6.3-2 [23.7 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.6.3-2 [14.7 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.62.4-1+b1 [1319 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.9 [994 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main amd64 googletest all 1.10.0-2 [626 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main arm64 hdf5-helpers arm64 1.10.4+repack-10 [35.2 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc1 arm64 1:9.2.1-25 [34.2 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main arm64 libcrypt1 arm64 1:4.4.10-10 [89.7 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main arm64 libc6 arm64 2.29-9 [2455 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main arm64 libaec0 arm64 1.0.4-1 [19.8 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main arm64 libsz2 arm64 1.0.4-1 [6736 B] Get:128 http://debian.oregonstate.edu/debian unstable/main arm64 libaec-dev arm64 1.0.4-1 [18.2 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main arm64 libasan5 arm64 9.2.1-25 [354 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main arm64 libatomic1 arm64 9.2.1-25 [8832 B] Get:131 http://debian.oregonstate.edu/debian unstable/main arm64 libgomp1 arm64 9.2.1-25 [78.6 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main arm64 libitm1 arm64 9.2.1-25 [24.7 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main arm64 liblsan0 arm64 9.2.1-25 [122 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main arm64 libtsan0 arm64 9.2.1-25 [274 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++6 arm64 9.2.1-25 [455 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main arm64 libubsan1 arm64 9.2.1-25 [117 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc-9-dev arm64 9.2.1-25 [886 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main arm64 linux-libc-dev arm64 5.4.13-1 [1038 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main arm64 libcrypt-dev arm64 1:4.4.10-10 [111 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main arm64 libc6-dev arm64 2.29-9 [2274 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++-9-dev arm64 9.2.1-25 [1635 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main arm64 libboost1.67-dev arm64 1.67.0-17 [8389 kB] Get:143 http://debian.oregonstate.edu/debian unstable/main arm64 libboost-dev arm64 1.67.0.2+b1 [4484 B] Get:144 http://debian.oregonstate.edu/debian unstable/main arm64 libbrotli1 arm64 1.0.7-6 [271 kB] Get:145 http://debian.oregonstate.edu/debian unstable/main arm64 libbz2-1.0 arm64 1.0.8-2 [46.3 kB] Get:146 http://debian.oregonstate.edu/debian unstable/main arm64 libcom-err2 arm64 1.45.5-2 [71.2 kB] Get:147 http://debian.oregonstate.edu/debian unstable/main arm64 libgmp10 arm64 2:6.1.2+dfsg-4 [226 kB] Get:148 http://debian.oregonstate.edu/debian unstable/main arm64 libnettle7 arm64 3.5.1+really3.5.1-2 [233 kB] Get:149 http://debian.oregonstate.edu/debian unstable/main arm64 libhogweed5 arm64 3.5.1+really3.5.1-2 [135 kB] Get:150 http://debian.oregonstate.edu/debian unstable/main arm64 libunistring2 arm64 0.9.10-2 [381 kB] Get:151 http://debian.oregonstate.edu/debian unstable/main arm64 libidn2-0 arm64 2.2.0-2 [81.8 kB] Get:152 http://debian.oregonstate.edu/debian unstable/main arm64 libffi7 arm64 3.3-3 [20.4 kB] Get:153 http://debian.oregonstate.edu/debian unstable/main arm64 libp11-kit0 arm64 0.23.19-2 [315 kB] Get:154 http://debian.oregonstate.edu/debian unstable/main arm64 libtasn1-6 arm64 4.15.0-2 [52.7 kB] Get:155 http://debian.oregonstate.edu/debian unstable/main arm64 libgnutls30 arm64 3.6.11.1-2 [1108 kB] Get:156 http://debian.oregonstate.edu/debian unstable/main arm64 libkeyutils1 arm64 1.6-6 [14.9 kB] Get:157 http://debian.oregonstate.edu/debian unstable/main arm64 libkrb5support0 arm64 1.17-6 [63.8 kB] Get:158 http://debian.oregonstate.edu/debian unstable/main arm64 libk5crypto3 arm64 1.17-6 [117 kB] Get:159 http://debian.oregonstate.edu/debian unstable/main arm64 libssl1.1 arm64 1.1.1d-2 [1377 kB] Get:160 http://debian.oregonstate.edu/debian unstable/main arm64 libkrb5-3 arm64 1.17-6 [350 kB] Get:161 http://debian.oregonstate.edu/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.17-6 [148 kB] Get:162 http://debian.oregonstate.edu/debian unstable/main arm64 libdb5.3 arm64 5.3.28+dfsg1-0.6 [622 kB] Get:163 http://debian.oregonstate.edu/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-2 [69.2 kB] Get:164 http://debian.oregonstate.edu/debian unstable/main arm64 libsasl2-2 arm64 2.1.27+dfsg-2 [105 kB] Get:165 http://debian.oregonstate.edu/debian unstable/main arm64 libldap-2.4-2 arm64 2.4.48+dfsg-1+b2 [217 kB] Get:166 http://debian.oregonstate.edu/debian unstable/main arm64 libnghttp2-14 arm64 1.40.0-1 [81.5 kB] Get:167 http://debian.oregonstate.edu/debian unstable/main arm64 libpsl5 arm64 0.20.2-2 [53.6 kB] Get:168 http://debian.oregonstate.edu/debian unstable/main arm64 zlib1g arm64 1:1.2.11.dfsg-1+b1 [88.4 kB] Get:169 http://debian.oregonstate.edu/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b1 [59.4 kB] Get:170 http://debian.oregonstate.edu/debian unstable/main arm64 libgpg-error0 arm64 1.36-7 [68.8 kB] Get:171 http://debian.oregonstate.edu/debian unstable/main arm64 libgcrypt20 arm64 1.8.5-3 [488 kB] Get:172 http://debian.oregonstate.edu/debian unstable/main arm64 libssh2-1 arm64 1.8.0-2.1 [135 kB] Get:173 http://debian.oregonstate.edu/debian unstable/main arm64 libcurl3-gnutls arm64 7.67.0-2 [299 kB] Get:174 http://debian.oregonstate.edu/debian unstable/main arm64 libdeflate0 arm64 1.5-1 [80.3 kB] Get:175 http://debian.oregonstate.edu/debian unstable/main arm64 libgfortran5 arm64 9.2.1-25 [322 kB] Get:176 http://debian.oregonstate.edu/debian unstable/main arm64 libgtest-dev arm64 1.10.0-2 [219 kB] Get:177 http://debian.oregonstate.edu/debian unstable/main arm64 libhdf5-103 arm64 1.10.4+repack-10 [1168 kB] Get:178 http://debian.oregonstate.edu/debian unstable/main arm64 libhdf5-cpp-103 arm64 1.10.4+repack-10 [132 kB] Get:179 http://debian.oregonstate.edu/debian unstable/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-1+b1 [208 kB] Get:180 http://debian.oregonstate.edu/debian unstable/main arm64 libjpeg62-turbo arm64 1:1.5.2-2+b1 [115 kB] Get:181 http://debian.oregonstate.edu/debian unstable/main arm64 libjpeg62-turbo-dev arm64 1:1.5.2-2+b1 [186 kB] Get:182 http://debian.oregonstate.edu/debian unstable/main arm64 libhdf5-dev arm64 1.10.4+repack-10 [2683 kB] Get:183 http://debian.oregonstate.edu/debian unstable/main arm64 liblzma5 arm64 5.2.4-1+b1 [149 kB] Get:184 http://debian.oregonstate.edu/debian unstable/main arm64 libhts3 arm64 1.10.2-2 [346 kB] Get:185 http://debian.oregonstate.edu/debian unstable/main arm64 liblzma-dev arm64 5.2.4-1+b1 [209 kB] Get:186 http://debian.oregonstate.edu/debian unstable/main arm64 libhts-dev arm64 1.10.2-2 [4841 kB] Get:187 http://debian.oregonstate.edu/debian unstable/main arm64 libpbcopper1.3.0 arm64 1.3.0+dfsg-3 [302 kB] Get:188 http://debian.oregonstate.edu/debian unstable/main arm64 libpbbam1.0.6 arm64 1.0.6+dfsg-2 [602 kB] Get:189 http://debian.oregonstate.edu/debian unstable/main arm64 libssl-dev arm64 1.1.1d-2 [1680 kB] Get:190 http://debian.oregonstate.edu/debian unstable/main arm64 libpbbam-dev arm64 1.0.6+dfsg-2 [86.0 kB] Get:191 http://debian.oregonstate.edu/debian unstable/main arm64 libpbcopper-dev arm64 1.3.0+dfsg-3 [149 kB] Get:192 http://debian.oregonstate.edu/debian unstable/main amd64 ninja-build amd64 1.9.0-3 [95.9 kB] Get:193 http://debian.oregonstate.edu/debian unstable/main amd64 meson all 0.53.1-1 [377 kB] Get:194 http://debian.oregonstate.edu/debian unstable/main amd64 pkg-config amd64 0.29-6 [63.5 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 124 MB in 2s (56.5 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 12778 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-4_amd64.deb ... Unpacking groff-base (1.22.4-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.2-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.2-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.9.0-2_amd64.deb ... Unpacking man-db (2.9.0-2) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../06-liblocale-gettext-perl_1.07-4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../07-libssl1.1_1.1.1d-2_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1d-2) ... Selecting previously unselected package libpython3.7-minimal:amd64. Preparing to unpack .../08-libpython3.7-minimal_3.7.6-1+b1_amd64.deb ... Unpacking libpython3.7-minimal:amd64 (3.7.6-1+b1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../09-libexpat1_2.2.9-1_amd64.deb ... Unpacking libexpat1:amd64 (2.2.9-1) ... Selecting previously unselected package python3.7-minimal. Preparing to unpack .../10-python3.7-minimal_3.7.6-1+b1_amd64.deb ... Unpacking python3.7-minimal (3.7.6-1+b1) ... Setting up libssl1.1:amd64 (1.1.1d-2) ... Setting up libpython3.7-minimal:amd64 (3.7.6-1+b1) ... Setting up libexpat1:amd64 (2.2.9-1) ... Setting up python3.7-minimal (3.7.6-1+b1) ... Selecting previously unselected package python3-minimal. (Reading database ... 13707 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.7.5-3_amd64.deb ... Unpacking python3-minimal (3.7.5-3) ... Selecting previously unselected package mime-support. Preparing to unpack .../1-mime-support_3.64_all.deb ... Unpacking mime-support (3.64) ... Selecting previously unselected package libmpdec2:amd64. Preparing to unpack .../2-libmpdec2_2.4.2-2_amd64.deb ... Unpacking libmpdec2:amd64 (2.4.2-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../3-readline-common_8.0-3_all.deb ... Unpacking readline-common (8.0-3) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../4-libreadline8_8.0-3_amd64.deb ... Unpacking libreadline8:amd64 (8.0-3) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../5-libsqlite3-0_3.31.0+really3.30.1+fossil191229-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.31.0+really3.30.1+fossil191229-1) ... Selecting previously unselected package libpython3.7-stdlib:amd64. Preparing to unpack .../6-libpython3.7-stdlib_3.7.6-1+b1_amd64.deb ... Unpacking libpython3.7-stdlib:amd64 (3.7.6-1+b1) ... Selecting previously unselected package python3.7. Preparing to unpack .../7-python3.7_3.7.6-1+b1_amd64.deb ... Unpacking python3.7 (3.7.6-1+b1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../8-libpython3-stdlib_3.7.5-3_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.7.5-3) ... Setting up python3-minimal (3.7.5-3) ... Selecting previously unselected package python3. (Reading database ... 14178 files and directories currently installed.) Preparing to unpack .../000-python3_3.7.5-3_amd64.deb ... Unpacking python3 (3.7.5-3) ... Selecting previously unselected package gcc-9-base:arm64. Preparing to unpack .../001-gcc-9-base_9.2.1-25_arm64.deb ... Unpacking gcc-9-base:arm64 (9.2.1-25) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../002-libncurses6_6.1+20191019-1_amd64.deb ... Unpacking libncurses6:amd64 (6.1+20191019-1) ... Selecting previously unselected package libprocps7:amd64. Preparing to unpack .../003-libprocps7_2%3a3.3.15-2+b1_amd64.deb ... Unpacking libprocps7:amd64 (2:3.3.15-2+b1) ... Selecting previously unselected package procps. Preparing to unpack .../004-procps_2%3a3.3.15-2+b1_amd64.deb ... Unpacking procps (2:3.3.15-2+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../005-sensible-utils_0.0.12+nmu1_all.deb ... Unpacking sensible-utils (0.0.12+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../006-libmagic-mgc_1%3a5.38-4_amd64.deb ... Unpacking libmagic-mgc (1:5.38-4) ... Selecting previously unselected package libmagic1:amd64. 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Setting up libconfig-inifiles-perl (3.000002-1) ... Setting up libpipeline1:amd64 (1.5.2-2) ... Setting up libfile-which-perl (1.23-1) ... Setting up libkeyutils1:amd64 (1.6-6) ... Setting up libpsl5:amd64 (0.20.2-2) ... Setting up mime-support (3.64) ... Setting up hdf5-helpers:arm64 (1.10.4+repack-10) ... Setting up libmagic-mgc (1:5.38-4) ... Setting up libarchive-zip-perl (1.67-1) ... Setting up libglib2.0-0:amd64 (2.62.4-1+b1) ... No schema files found: doing nothing. Setting up libprocps7:amd64 (2:3.3.15-2+b1) ... Setting up gcc-9-aarch64-linux-gnu-base:amd64 (9.2.1-21cross1) ... Setting up libdebhelper-perl (12.9) ... Setting up libbrotli1:amd64 (1.0.7-6) ... Setting up libsqlite3-0:amd64 (3.31.0+really3.30.1+fossil191229-1) ... Setting up libnghttp2-14:amd64 (1.40.0-1) ... Setting up libmagic1:amd64 (1:5.38-4) ... Setting up linux-libc-dev:arm64 (5.4.13-1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up binutils-aarch64-linux-gnu (2.33.90.20200122-2) ... Setting up cpp-9-aarch64-linux-gnu (9.2.1-21cross1) ... Setting up file (1:5.38-4) ... Setting up libldap-common (2.4.48+dfsg-1) ... Setting up libyaml-perl (1.30-1) ... Setting up googletest (1.10.0-2) ... Setting up libicu63:amd64 (63.2-2) ... Setting up ninja-build (1.9.0-3) ... Setting up libkrb5support0:amd64 (1.17-6) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-2) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cpp-aarch64-linux-gnu (4:9.2.1-3.1) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3) ... Setting up libuv1:amd64 (1.33.1-2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b1) ... Setting up libncurses6:amd64 (6.1+20191019-1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libc6-arm64-cross (2.29-9cross1) ... Setting up autopoint (0.19.8.1-10) ... Setting up pkg-config (0.29-6) ... Setting up gcc-9-cross-base (9.2.1-21cross1) ... Setting up libk5crypto3:amd64 (1.17-6) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-2) ... Setting up linux-libc-dev-arm64-cross (5.4.8-1cross1) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up librhash0:amd64 (1.3.9-1) ... Setting up libcrypt-dev:amd64 (1:4.4.10-10) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up procps (2:3.3.15-2+b1) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode Setting up libsub-override-perl (0.09-2) ... Setting up libc6-dev:amd64 (2.29-9) ... Setting up libssh2-1:amd64 (1.8.0-2.1) ... Setting up cmake-data (3.15.4-1) ... Setting up libkrb5-3:amd64 (1.17-6) ... Setting up libmpdec2:amd64 (2.4.2-2) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up readline-common (8.0-3) ... Setting up libxml2:amd64 (2.9.4+dfsg1-8) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up libjsoncpp1:amd64 (1.7.4-3.1) ... Setting up gcc-9-base:arm64 (9.2.1-25) ... Setting up libatomic1-arm64-cross (9.2.1-21cross1) ... Setting up libgcc1-arm64-cross (1:9.2.1-21cross1) ... Setting up libfile-stripnondeterminism-perl (1.6.3-2) ... Setting up liblsan0-arm64-cross (9.2.1-21cross1) ... Setting up libgomp1-arm64-cross (9.2.1-21cross1) ... Setting up libgtest-dev:arm64 (1.10.0-2) ... Setting up libstdc++-9-dev:amd64 (9.2.1-25) ... Setting up libtool (2.4.6-11) ... Setting up libarchive13:amd64 (3.4.0-1+b1) ... Setting up libreadline8:amd64 (8.0-3) ... Setting up libtsan0-arm64-cross (9.2.1-21cross1) ... Setting up libldap-2.4-2:amd64 (2.4.48+dfsg-1+b2) ... Setting up m4 (1.4.18-4) ... Setting up libc6-dev-arm64-cross (2.29-9cross1) ... Setting up libasan5-arm64-cross (9.2.1-21cross1) ... Setting up libstdc++6-arm64-cross (9.2.1-21cross1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:amd64 (1.17-6) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up libitm1-arm64-cross (9.2.1-21cross1) ... Setting up ucf (3.0038+nmu1) ... Setting up g++-9 (9.2.1-25) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.6.3-2) ... Setting up g++ (4:9.2.1-3.1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4) ... Setting up build-essential (12.8) ... Setting up libcurl4:amd64 (7.67.0-2) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libpython3.7-stdlib:amd64 (3.7.6-1+b1) ... Setting up gettext (0.19.8.1-10) ... Setting up libubsan1-arm64-cross (9.2.1-21cross1) ... Setting up libgcc-9-dev-arm64-cross (9.2.1-21cross1) ... Setting up man-db (2.9.0-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up intltool-debian (0.35.0+20060710.5) ... Setting up gcc-9-aarch64-linux-gnu (9.2.1-21cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up cmake (3.15.4-1) ... Setting up libstdc++-9-dev-arm64-cross (9.2.1-21cross1) ... Setting up libpython3-stdlib:amd64 (3.7.5-3) ... Setting up gcc-aarch64-linux-gnu (4:9.2.1-3.1) ... Setting up python3.7 (3.7.6-1+b1) ... Setting up po-debconf (1.0.21) ... Setting up python3 (3.7.5-3) ... Setting up g++-9-aarch64-linux-gnu (9.2.1-21cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-aarch64-linux-gnu (4:9.2.1-3.1) ... Setting up meson (0.53.1-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-arm64 (12.8) ... Setting up libcrypt1:arm64 (1:4.4.10-10) ... Setting up dh-autoreconf (19) ... Setting up libc6:arm64 (2.29-9) ... Setting up libnettle7:arm64 (3.5.1+really3.5.1-2) ... Setting up libcrypt-dev:arm64 (1:4.4.10-10) ... Setting up libtasn1-6:arm64 (4.15.0-2) ... Setting up libc6-dev:arm64 (2.29-9) ... Setting up libbz2-1.0:arm64 (1.0.8-2) ... Setting up libdb5.3:arm64 (5.3.28+dfsg1-0.6) ... Setting up libitm1:arm64 (9.2.1-25) ... Setting up libkeyutils1:arm64 (1.6-6) ... Setting up liblzma5:arm64 (5.2.4-1+b1) ... Setting up libgpg-error0:arm64 (1.36-7) ... Setting up libgcc1:arm64 (1:9.2.1-25) ... Setting up libssl1.1:arm64 (1.1.1d-2) ... Setting up libbrotli1:arm64 (1.0.7-6) ... Setting up libffi7:arm64 (3.3-3) ... Setting up libnghttp2-14:arm64 (1.40.0-1) ... Setting up libunistring2:arm64 (0.9.10-2) ... Setting up libdeflate0:arm64 (1.5-1) ... Setting up libgcrypt20:arm64 (1.8.5-3) ... Setting up debhelper (12.9) ... Setting up zlib1g:arm64 (1:1.2.11.dfsg-1+b1) ... Setting up libidn2-0:arm64 (2.2.0-2) ... Setting up libcom-err2:arm64 (1.45.5-2) ... Setting up libgomp1:arm64 (9.2.1-25) ... Setting up libaec0:arm64 (1.0.4-1) ... Setting up libkrb5support0:arm64 (1.17-6) ... Setting up libsasl2-modules-db:arm64 (2.1.27+dfsg-2) ... Setting up libasan5:arm64 (9.2.1-25) ... Setting up libjpeg62-turbo:arm64 (1:1.5.2-2+b1) ... Setting up libjpeg62-turbo-dev:arm64 (1:1.5.2-2+b1) ... Setting up libgmp10:arm64 (2:6.1.2+dfsg-4) ... Setting up libp11-kit0:arm64 (0.23.19-2) ... Setting up libssl-dev:arm64 (1.1.1d-2) ... Setting up libatomic1:arm64 (9.2.1-25) ... Setting up libk5crypto3:arm64 (1.17-6) ... Setting up libsasl2-2:arm64 (2.1.27+dfsg-2) ... Setting up libgfortran5:arm64 (9.2.1-25) ... Setting up liblzma-dev:arm64 (5.2.4-1+b1) ... Setting up zlib1g-dev:arm64 (1:1.2.11.dfsg-1+b1) ... Setting up libssh2-1:arm64 (1.8.0-2.1) ... Setting up libkrb5-3:arm64 (1.17-6) ... Setting up libstdc++6:arm64 (9.2.1-25) ... Setting up liblsan0:arm64 (9.2.1-25) ... Setting up libsz2:arm64 (1.0.4-1) ... Setting up libtsan0:arm64 (9.2.1-25) ... Setting up libpsl5:arm64 (0.20.2-2) ... Setting up libhogweed5:arm64 (3.5.1+really3.5.1-2) ... Setting up libaec-dev:arm64 (1.0.4-1) ... Setting up libgnutls30:arm64 (3.6.11.1-2) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b1) ... Setting up libhdf5-103:arm64 (1.10.4+repack-10) ... Setting up libgssapi-krb5-2:arm64 (1.17-6) ... Setting up libubsan1:arm64 (9.2.1-25) ... Setting up libpbcopper1.3.0:arm64 (1.3.0+dfsg-3) ... Setting up libhdf5-cpp-103:arm64 (1.10.4+repack-10) ... Setting up libldap-2.4-2:arm64 (2.4.48+dfsg-1+b2) ... Setting up libcurl3-gnutls:arm64 (7.67.0-2) ... Setting up libgcc-9-dev:arm64 (9.2.1-25) ... Setting up libhdf5-dev:arm64 (1.10.4+repack-10) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libpbcopper-dev:arm64 (1.3.0+dfsg-3) ... Setting up libhts3:arm64 (1.10.2-2) ... Setting up libstdc++-9-dev:arm64 (9.2.1-25) ... Setting up libhts-dev:arm64 (1.10.2-2) ... Setting up libpbbam1.0.6:arm64 (1.0.6+dfsg-2) ... Setting up libpbbam-dev:arm64 (1.0.6+dfsg-2) ... Setting up libboost1.67-dev:arm64 (1.67.0-17) ... Setting up libboost-dev:arm64 (1.67.0.2+b1) ... Setting up sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.29-9) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 #1 SMP Debian 4.9.144-3.1 (2019-02-19) amd64 (x86_64) Toolchain package versions: binutils_2.33.90.20200122-2 dpkg-dev_1.19.7 g++-9_9.2.1-25 gcc-8_8.3.0-26 gcc-9_9.2.1-25 libc6-dev_2.29-9 libstdc++-9-dev_9.2.1-25 libstdc++-9-dev-arm64-cross_9.2.1-21cross1 libstdc++6_9.2.1-25 libstdc++6-arm64-cross_9.2.1-21cross1 linux-libc-dev_5.4.13-1 Package versions: adduser_3.118 apt_1.8.4 autoconf_2.69-11.1 automake_1:1.16.1-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-5 binutils_2.33.90.20200122-2 binutils-aarch64-linux-gnu_2.33.90.20200122-2 binutils-common_2.33.90.20200122-2 binutils-x86-64-linux-gnu_2.33.90.20200122-2 bsdmainutils_11.1.2+b1 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 cmake_3.15.4-1 cmake-data_3.15.4-1 coreutils_8.30-3+b1 cpp_4:9.2.1-3.1 cpp-8_8.3.0-26 cpp-9_9.2.1-25 cpp-9-aarch64-linux-gnu_9.2.1-21cross1 cpp-aarch64-linux-gnu_4:9.2.1-3.1 cross-config_2.6.15-3 crossbuild-essential-arm64_12.8 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.9 debian-archive-keyring_2019.1 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.6.3-2 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.5-2 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.38-4 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-9_9.2.1-25 g++-9-aarch64-linux-gnu_9.2.1-21cross1 g++-aarch64-linux-gnu_4:9.2.1-3.1 gcc_4:9.2.1-3.1 gcc-8_8.3.0-26 gcc-8-base_8.3.0-26 gcc-9_9.2.1-25 gcc-9-aarch64-linux-gnu_9.2.1-21cross1 gcc-9-aarch64-linux-gnu-base_9.2.1-21cross1 gcc-9-base_9.2.1-25 gcc-9-cross-base_9.2.1-21cross1 gcc-aarch64-linux-gnu_4:9.2.1-3.1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 googletest_1.10.0-2 gpgv_2.2.19-1 grep_3.4-1 groff-base_1.22.4-4 gzip_1.9-3+b1 hdf5-helpers_1.10.4+repack-10 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-5 libaec-dev_1.0.4-1 libaec0_1.0.4-1 libapt-pkg5.0_1.8.4 libarchive-zip-perl_1.67-1 libarchive13_3.4.0-1+b1 libasan5_9.2.1-25 libasan5-arm64-cross_9.2.1-21cross1 libatomic1_9.2.1-25 libatomic1-arm64-cross_9.2.1-21cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2+b1 libbinutils_2.33.90.20200122-2 libblkid1_2.34-0.1 libboost-dev_1.67.0.2+b1 libboost1.67-dev_1.67.0-17 libbrotli1_1.0.7-6 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.29-9 libc-dev-bin_2.29-9 libc6_2.29-9 libc6-arm64-cross_2.29-9cross1 libc6-dev_2.29-9 libc6-dev-arm64-cross_2.29-9cross1 libcap-ng0_0.7.9-2.1+b1 libcc1-0_9.2.1-25 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libgssapi-krb5-2_1.17-6 libgtest-dev_1.10.0-2 libhdf5-103_1.10.4+repack-10 libhdf5-cpp-103_1.10.4+repack-10 libhdf5-dev_1.10.4+repack-10 libhogweed4_3.5.1+really3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libhts-dev_1.10.2-2 libhts3_1.10.2-2 libicu63_63.2-2 libidn2-0_2.2.0-2 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22-2 libitm1_9.2.1-25 libitm1-arm64-cross_9.2.1-21cross1 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libjsoncpp1_1.7.4-3.1 libk5crypto3_1.17-6 libkeyutils1_1.6-6 libkrb5-3_1.17-6 libkrb5support0_1.17-6 libldap-2.4-2_2.4.48+dfsg-1+b2 libldap-common_2.4.48+dfsg-1 liblocale-gettext-perl_1.07-4 liblsan0_9.2.1-25 liblsan0-arm64-cross_9.2.1-21cross1 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1+b1 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.2-1 libmpx2_8.3.0-26 libncurses6_6.1+20191019-1 libncursesw6_6.1+20191019-1 libnettle6_3.5.1+really3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.40.0-1 libp11-kit0_0.23.19-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpbbam-dev_1.0.6+dfsg-2 libpbbam1.0.6_1.0.6+dfsg-2 libpbcopper-dev_1.3.0+dfsg-3 libpbcopper1.3.0_1.3.0+dfsg-3 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12+b1 libperl5.28_5.28.1-6 libperl5.30_5.30.0-9 libpipeline1_1.5.2-2 libprocps7_2:3.3.15-2+b1 libpsl5_0.20.2-2 libpython3-stdlib_3.7.5-3 libpython3.7-minimal_3.7.6-1+b1 libpython3.7-stdlib_3.7.6-1+b1 libquadmath0_9.2.1-25 libreadline8_8.0-3 librhash0_1.3.9-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.2-2 libselinux1_3.0-1 libsemanage-common_3.0-1 libsemanage1_3.0-1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libsqlite3-0_3.31.0+really3.30.1+fossil191229-1 libss2_1.45.5-2 libssh2-1_1.8.0-2.1 libssl-dev_1.1.1d-2 libssl1.1_1.1.1d-2 libstdc++-9-dev_9.2.1-25 libstdc++-9-dev-arm64-cross_9.2.1-21cross1 libstdc++6_9.2.1-25 libstdc++6-arm64-cross_9.2.1-21cross1 libsub-override-perl_0.09-2 libsystemd0_244.1-1 libsz2_1.0.4-1 libtasn1-6_4.15.0-2 libtinfo6_6.1+20191019-1 libtool_2.4.6-11 libtsan0_9.2.1-25 libtsan0-arm64-cross_9.2.1-21cross1 libubsan1_9.2.1-25 libubsan1-arm64-cross_9.2.1-21cross1 libuchardet0_0.0.6-3 libudev1_244.1-1 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libuv1_1.33.1-2 libxml-libxml-perl_2.0134+dfsg-1+b1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-8 libyaml-perl_1.30-1 libzstd1_1.4.4+dfsg-1 linux-libc-dev_5.4.13-1 linux-libc-dev-arm64-cross_5.4.8-1cross1 login_1:4.8-1 logsave_1.45.5-2 lsb-base_11.1.0 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-2 mawk_1.3.4.20200120-1 meson_0.53.1-1 mime-support_3.64 mount_2.34-0.1 ncurses-base_6.1+20191019-1 ncurses-bin_6.1+20191019-1 ninja-build_1.9.0-3 passwd_1:4.8-1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.0-9 pkg-config_0.29-6 po-debconf_1.0.21 procps_2:3.3.15-2+b1 python3_3.7.5-3 python3-minimal_3.7.5-3 python3.7_3.7.6-1+b1 python3.7-minimal_3.7.6-1+b1 readline-common_8.0-3 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-2.1 tar_1.30+dfsg-6+b1 tzdata_2019c-3 ucf_3.0038+nmu1 util-linux_2.34-0.1 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-1+b1 zlib1g-dev_1:1.2.11.dfsg-1+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: pbseqlib Binary: libpbseq, libpbseq-dev, libpbdata-dev, libpbihdf-dev, libblasr-dev, libblasr Architecture: any all Version: 5.3.3+dfsg-4 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/PacificBiosciences/blasr_libcpp Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/pbseqlib Vcs-Git: https://salsa.debian.org/med-team/pbseqlib.git Build-Depends: debhelper-compat (= 12), meson, pkg-config, cmake, googletest, libgtest-dev, zlib1g-dev, libhdf5-dev, libboost-dev, libpbbam-dev (>= 0.18.0+dfsg-1~), libpbcopper-dev, libhts-dev Package-List: libblasr deb libs optional arch=any libblasr-dev deb libdevel optional arch=any libpbdata-dev deb libdevel optional arch=all libpbihdf-dev deb libdevel optional arch=all libpbseq deb libs optional arch=all libpbseq-dev deb libdevel optional arch=any Checksums-Sha1: bab056887c594ed5d2c55b1164e8bef06b69979f 970424 pbseqlib_5.3.3+dfsg.orig.tar.xz 6bfeadc0b5e4018f7135c87930dcb4921032a60c 8976 pbseqlib_5.3.3+dfsg-4.debian.tar.xz Checksums-Sha256: 6a8efe8dec8e2ffc9b503ad392b06732262279451a3b2dd40a617b2309d1dcdc 970424 pbseqlib_5.3.3+dfsg.orig.tar.xz 6fe618d2ab82254e59d8c4e5e78a13599a99ca88197a8a4f7d3fa4c124287177 8976 pbseqlib_5.3.3+dfsg-4.debian.tar.xz Files: 41bcbf16cb8a5995de099388d7559b60 970424 pbseqlib_5.3.3+dfsg.orig.tar.xz bc0bd7892a95857d7401b4b8f4224896 8976 pbseqlib_5.3.3+dfsg-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl4xmFIRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHABw//SevdRaF/IP3QoJgDkdfxPtRtI3zf71RC HzjwAh3GyH2GCnk5uyMNte0hQMs8ipQLRquAFdm3KLMcJyuhABs7KD6w7YYQkja7 Y9LcAnxP+lOOTlrjvVBn9R7rNNRBuxfzD8kKPD88qhbEBm8qSxiJzJ+y5vUE1yti hYva8juuvs0YQ9htp5eNgEhyD9xFKHcmNMMCDfsNy5SL+0P55pq9ZEI958aLlNCM /jmToWRLCOLzcr4Dt/Db9mw5Vmv7l1IwQN6A4MgGheYBoAxzMAWn70NSNioeYxie ZwihiroL86XhSDhX/M/sycFZ6geRi1PvFnP0hnEDW6/7yTQAbDLT7cLYxLWv6KMA 4BdCt4opf/982OAnzEPkC0cMg7vQRpQYKbXWSy2hVPFPbc3x831+IaS58uK4M3c6 HKr+w6ggVQSS0j7QF/1QKO22bF3fj5wXieEixIPdLS6AUlkO/s/fmFNAYd2aoDTD JkEqxpjDxPpRgg3rJ0oRU3E3CNsZQkf7NV5rh8ONCLrAdksriF2RLReUDQEoQQY/ YHgjL123LUiUEwqqIh2cicoXptc9b6wiK6FHBF1q4TId/wfbqU8GnOdNro1BzKNP 3MVsoGqjYDUhM47pYAga/xgrXppFG2HXLF+YzM7+ZT2JHXfGr4xLqAiYmv6DCdQa +zxcghNlRvg= =iyPR -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Wed Jan 29 14:36:02 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./pbseqlib_5.3.3+dfsg-4.dsc dpkg-source: info: extracting pbseqlib in /<> dpkg-source: info: unpacking pbseqlib_5.3.3+dfsg.orig.tar.xz dpkg-source: info: unpacking pbseqlib_5.3.3+dfsg-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hdf5-1.10.1-support.patch dpkg-source: info: applying hdf5-1.10.0-support.patch dpkg-source: info: applying meson.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.arm64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-2977ce90-a7ba-4a89-aba4-a9684a6d7c01 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarm64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package pbseqlib dpkg-buildpackage: info: source version 5.3.3+dfsg-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type aarch64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean find -name defines.mk -delete rm -f pbdata/libconfig.h make[1]: Leaving directory '/<>' dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a cd obj-aarch64-linux-gnu && LC_ALL=C.UTF-8 meson .. --wrap-mode=nodownload --buildtype=plain --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/aarch64-linux-gnu --cross-file /<>/pbseqlib-5.3.3\+dfsg/debian/.debhelper/generated/_source/meson-cross-file.conf The Meson build system Version: 0.53.1 Source dir: /<> Build dir: /<>/obj-aarch64-linux-gnu Build type: cross build Project name: libblasr Project version: 5.3.3 Appending CXXFLAGS from environment: '-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14' Appending LDFLAGS from environment: ['-Wl,-z,relro', '-Wl,-z,now'] Appending CPPFLAGS from environment: '-Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -I/usr/include/hdf5/serial' C++ compiler for the build machine: c++ (gcc 9.2.1 "c++ (Debian 9.2.1-25) 9.2.1 20200123") C++ linker for the build machine: c++ GNU ld.bfd 2.33.90.20200122 C++ compiler for the host machine: /usr/bin/aarch64-linux-gnu-g++ (gcc 9.2.1 "aarch64-linux-gnu-g++ (Debian 9.2.1-21) 9.2.1 20191130") C++ linker for the host machine: /usr/bin/aarch64-linux-gnu-g++ GNU ld.bfd 2.33.90.20200122 Build machine cpu family: x86_64 Build machine cpu: x86_64 Host machine cpu family: aarch64 Host machine cpu: arm64 Target machine cpu family: aarch64 Target machine cpu: arm64 Compiler for C++ supports arguments -Wno-delete-non-virtual-dtor -Wdelete-non-virtual-dtor: YES Compiler for C++ supports arguments -Wno-unused-variable -Wunused-variable: YES Compiler for C++ supports arguments -Wno-non-virtual-dtor -Wnon-virtual-dtor: YES Run-time dependency Boost found: YES 1.67 Found pkg-config: /usr/bin/aarch64-linux-gnu-pkg-config (0.29) Run-time dependency pbbam found: YES 1.0.6 Run-time dependency zlib found: YES 1.2.11 Library rt found: YES WARNING: Project targeting '>= 0.46.0' but tried to use feature introduced in '0.49.0': disabler arg in dependency Run-time dependency HDF5 for cpp found: YES 1.10.4 Configuring LibBlasrConfig.h using configuration Program tools/check-formatting found: YES (/<>/tools/check-formatting) Run-time dependency GTest found: YES 1.10.0 Build targets in project: 2 WARNING: Project specifies a minimum meson_version '>= 0.46.0' but uses features which were added in newer versions: * 0.49.0: {'disabler arg in dependency'} Option buildtype is: plain [default: release] Found ninja-1.9.0 at /usr/bin/ninja dh_auto_build -a cd obj-aarch64-linux-gnu && LC_ALL=C.UTF-8 ninja -j1 -v [1/186] /usr/bin/aarch64-linux-gnu-g++ -Iblasr@sha -I. -I.. -I../ -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'blasr@sha/hdf_BufferedHDF2DArray.cpp.o' -MF 'blasr@sha/hdf_BufferedHDF2DArray.cpp.o.d' -o 'blasr@sha/hdf_BufferedHDF2DArray.cpp.o' -c ../hdf/BufferedHDF2DArray.cpp [2/186] /usr/bin/aarch64-linux-gnu-g++ -Iblasr@sha -I. -I.. -I../ -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'blasr@sha/hdf_BufferedHDFArray.cpp.o' -MF 'blasr@sha/hdf_BufferedHDFArray.cpp.o.d' -o 'blasr@sha/hdf_BufferedHDFArray.cpp.o' -c ../hdf/BufferedHDFArray.cpp [3/186] /usr/bin/aarch64-linux-gnu-g++ -Iblasr@sha -I. -I.. -I../ -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'blasr@sha/hdf_DatasetCollection.cpp.o' -MF 'blasr@sha/hdf_DatasetCollection.cpp.o.d' -o 'blasr@sha/hdf_DatasetCollection.cpp.o' -c ../hdf/DatasetCollection.cpp [4/186] /usr/bin/aarch64-linux-gnu-g++ -Iblasr@sha -I. -I.. -I../ -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'blasr@sha/hdf_HDFAlnGroupGroup.cpp.o' -MF 'blasr@sha/hdf_HDFAlnGroupGroup.cpp.o.d' -o 'blasr@sha/hdf_HDFAlnGroupGroup.cpp.o' -c ../hdf/HDFAlnGroupGroup.cpp [5/186] /usr/bin/aarch64-linux-gnu-g++ -Iblasr@sha -I. -I.. -I../ -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'blasr@sha/hdf_HDFAlnInfoGroup.cpp.o' -MF 'blasr@sha/hdf_HDFAlnInfoGroup.cpp.o.d' -o 'blasr@sha/hdf_HDFAlnInfoGroup.cpp.o' -c ../hdf/HDFAlnInfoGroup.cpp [6/186] /usr/bin/aarch64-linux-gnu-g++ -Iblasr@sha -I. -I.. -I../ -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat 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-I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'blasr@sha/hdf_HDFUtils.cpp.o' -MF 'blasr@sha/hdf_HDFUtils.cpp.o.d' -o 'blasr@sha/hdf_HDFUtils.cpp.o' -c ../hdf/HDFUtils.cpp [25/186] /usr/bin/aarch64-linux-gnu-g++ -Iblasr@sha -I. -I.. -I../ -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'blasr@sha/hdf_HDFWriterBase.cpp.o' -MF 'blasr@sha/hdf_HDFWriterBase.cpp.o.d' -o 'blasr@sha/hdf_HDFWriterBase.cpp.o' -c 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-D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'blasr@sha/pbdata_PackedDNASequence.cpp.o' -MF 'blasr@sha/pbdata_PackedDNASequence.cpp.o.d' -o 'blasr@sha/pbdata_PackedDNASequence.cpp.o' -c ../pbdata/PackedDNASequence.cpp [136/186] /usr/bin/aarch64-linux-gnu-g++ -Iblasr@sha -I. -I.. -I../ -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'blasr@sha/pbdata_ReverseCompressIndex.cpp.o' -MF 'blasr@sha/pbdata_ReverseCompressIndex.cpp.o.d' -o 'blasr@sha/pbdata_ReverseCompressIndex.cpp.o' -c ../pbdata/ReverseCompressIndex.cpp [137/186] /usr/bin/aarch64-linux-gnu-g++ -Iblasr@sha -I. -I.. -I../ -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'blasr@sha/pbdata_SMRTSequence.cpp.o' -MF 'blasr@sha/pbdata_SMRTSequence.cpp.o.d' -o 'blasr@sha/pbdata_SMRTSequence.cpp.o' -c ../pbdata/SMRTSequence.cpp [138/186] /usr/bin/aarch64-linux-gnu-g++ -Iblasr@sha -I. -I.. -I../ -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'blasr@sha/pbdata_StringUtils.cpp.o' -MF 'blasr@sha/pbdata_StringUtils.cpp.o.d' -o 'blasr@sha/pbdata_StringUtils.cpp.o' -c ../pbdata/StringUtils.cpp [139/186] /usr/bin/aarch64-linux-gnu-g++ -o libblasr.so.5.3.3 'blasr@sha/hdf_BufferedHDF2DArray.cpp.o' 'blasr@sha/hdf_BufferedHDFArray.cpp.o' 'blasr@sha/hdf_DatasetCollection.cpp.o' 'blasr@sha/hdf_HDFAlnGroupGroup.cpp.o' 'blasr@sha/hdf_HDFAlnInfoGroup.cpp.o' 'blasr@sha/hdf_HDFAtom.cpp.o' 'blasr@sha/hdf_HDFAttributable.cpp.o' 'blasr@sha/hdf_HDFBaseCallsWriter.cpp.o' 'blasr@sha/hdf_HDFBaxWriter.cpp.o' 'blasr@sha/hdf_HDFCmpExperimentGroup.cpp.o' 'blasr@sha/hdf_HDFCmpSupportedFields.cpp.o' 'blasr@sha/hdf_HDFData.cpp.o' 'blasr@sha/hdf_HDFFile.cpp.o' 'blasr@sha/hdf_HDFGroup.cpp.o' 'blasr@sha/hdf_HDFNewBasReader.cpp.o' 'blasr@sha/hdf_HDFPulseCallsWriter.cpp.o' 'blasr@sha/hdf_HDFPulseDataFile.cpp.o' 'blasr@sha/hdf_HDFPulseH5Writer.cpp.o' 'blasr@sha/hdf_HDFPulseWriter.cpp.o' 'blasr@sha/hdf_HDFRegionsWriter.cpp.o' 'blasr@sha/hdf_HDFRegionTableReader.cpp.o' 'blasr@sha/hdf_HDFScanDataReader.cpp.o' 'blasr@sha/hdf_HDFScanDataWriter.cpp.o' 'blasr@sha/hdf_HDFUtils.cpp.o' 'blasr@sha/hdf_HDFWriterBase.cpp.o' 'blasr@sha/hdf_HDFZMWMetricsWriter.cpp.o' 'blasr@sha/hdf_HDFZMWReader.cpp.o' 'blasr@sha/hdf_HDFZMWWriter.cpp.o' 'blasr@sha/alignment_algorithms_alignment_sdp_SDPFragment.cpp.o' 'blasr@sha/alignment_algorithms_alignment_sdp_SparseDynamicProgramming.cpp.o' 'blasr@sha/alignment_algorithms_alignment_AlignmentUtils.cpp.o' 'blasr@sha/alignment_algorithms_alignment_BaseScoreFunction.cpp.o' 'blasr@sha/alignment_algorithms_alignment_ExtendAlign.cpp.o' 'blasr@sha/alignment_algorithms_alignment_GuidedAlign.cpp.o' 'blasr@sha/alignment_algorithms_alignment_IDSScoreFunction.cpp.o' 'blasr@sha/alignment_algorithms_alignment_KBandAlign.cpp.o' 'blasr@sha/alignment_algorithms_alignment_QualityValueScoreFunction.cpp.o' 'blasr@sha/alignment_algorithms_alignment_ScoreMatrices.cpp.o' 'blasr@sha/alignment_algorithms_alignment_StringToScoreMatrix.cpp.o' 'blasr@sha/alignment_algorithms_anchoring_BWTSearch.cpp.o' 'blasr@sha/alignment_algorithms_anchoring_ClusterProbability.cpp.o' 'blasr@sha/alignment_algorithms_anchoring_Coordinate.cpp.o' 'blasr@sha/alignment_algorithms_anchoring_FindMaxInterval.cpp.o' 'blasr@sha/alignment_algorithms_sorting_DifferenceCovers.cpp.o' 'blasr@sha/alignment_algorithms_sorting_LightweightSuffixArray.cpp.o' 'blasr@sha/alignment_algorithms_sorting_MultikeyQuicksort.cpp.o' 'blasr@sha/alignment_algorithms_sorting_qsufsort.cpp.o' 'blasr@sha/alignment_datastructures_alignment_AlignmentCandidate.cpp.o' 'blasr@sha/alignment_datastructures_alignment_AlignmentContext.cpp.o' 'blasr@sha/alignment_datastructures_alignment_Alignment.cpp.o' 'blasr@sha/alignment_datastructures_alignment_AlignmentMap.cpp.o' 'blasr@sha/alignment_datastructures_alignment_AlignmentStats.cpp.o' 'blasr@sha/alignment_datastructures_alignment_CmpFile.cpp.o' 'blasr@sha/alignment_datastructures_alignment_FilterCriteria.cpp.o' 'blasr@sha/alignment_datastructures_alignment_SAMToAlignmentCandidateAdapter.cpp.o' 'blasr@sha/alignment_datastructures_alignmentset_SAMQVConversion.cpp.o' 'blasr@sha/alignment_datastructures_alignmentset_SAMSupplementalQVList.cpp.o' 'blasr@sha/alignment_datastructures_anchoring_AnchorParameters.cpp.o' 'blasr@sha/alignment_datastructures_anchoring_ClusterList.cpp.o' 'blasr@sha/alignment_datastructures_anchoring_MatchPos.cpp.o' 'blasr@sha/alignment_datastructures_anchoring_WeightedInterval.cpp.o' 'blasr@sha/alignment_files_BaseSequenceIO.cpp.o' 'blasr@sha/alignment_files_CCSIterator.cpp.o' 'blasr@sha/alignment_files_FragmentCCSIterator.cpp.o' 'blasr@sha/alignment_files_ReaderAgglomerate.cpp.o' 'blasr@sha/alignment_format_CompareSequencesPrinter.cpp.o' 'blasr@sha/alignment_format_IntervalPrinter.cpp.o' 'blasr@sha/alignment_format_SAMHeaderPrinter.cpp.o' 'blasr@sha/alignment_format_SAMPrinter.cpp.o' 'blasr@sha/alignment_format_SummaryPrinter.cpp.o' 'blasr@sha/alignment_query_PbiFilterZmwGroupQuery.cpp.o' 'blasr@sha/alignment_query_SequentialZmwGroupQuery.cpp.o' 'blasr@sha/alignment_qvs_QualityValueProfile.cpp.o' 'blasr@sha/alignment_simulator_ContextSample.cpp.o' 'blasr@sha/alignment_simulator_ContextSet.cpp.o' 'blasr@sha/alignment_simulator_LengthHistogram.cpp.o' 'blasr@sha/alignment_simulator_QualitySample.cpp.o' 'blasr@sha/alignment_statistics_cdfs.cpp.o' 'blasr@sha/alignment_statistics_LookupAnchorDistribution.cpp.o' 'blasr@sha/alignment_statistics_pdfs.cpp.o' 'blasr@sha/alignment_statistics_StatUtils.cpp.o' 'blasr@sha/alignment_tuples_BaseTuple.cpp.o' 'blasr@sha/alignment_tuples_DNATuple.cpp.o' 'blasr@sha/alignment_tuples_TupleMetrics.cpp.o' 'blasr@sha/alignment_utils_BlasrFileUtils.cpp.o' 'blasr@sha/alignment_utils_FileOfFileNames.cpp.o' 'blasr@sha/alignment_utils_LogUtils.cpp.o' 'blasr@sha/alignment_utils_PhredUtils.cpp.o' 'blasr@sha/alignment_utils_RangeUtils.cpp.o' 'blasr@sha/alignment_utils_RegionUtils.cpp.o' 'blasr@sha/alignment_MappingMetrics.cpp.o' 'blasr@sha/pbdata_alignment_CmpAlignment.cpp.o' 'blasr@sha/pbdata_amos_AfgBasWriter.cpp.o' 'blasr@sha/pbdata_loadpulses_MetricField.cpp.o' 'blasr@sha/pbdata_loadpulses_MovieAlnIndexLookupTable.cpp.o' 'blasr@sha/pbdata_metagenome_TitleTable.cpp.o' 'blasr@sha/pbdata_qvs_BlasrQualityValue.cpp.o' 'blasr@sha/pbdata_qvs_QualityTransform.cpp.o' 'blasr@sha/pbdata_reads_AcqParams.cpp.o' 'blasr@sha/pbdata_reads_BaseFile.cpp.o' 'blasr@sha/pbdata_reads_HoleXY.cpp.o' 'blasr@sha/pbdata_reads_PulseBaseCommon.cpp.o' 'blasr@sha/pbdata_reads_PulseFile.cpp.o' 'blasr@sha/pbdata_reads_ReadType.cpp.o' 'blasr@sha/pbdata_reads_RegionAnnotation.cpp.o' 'blasr@sha/pbdata_reads_RegionAnnotations.cpp.o' 'blasr@sha/pbdata_reads_RegionTable.cpp.o' 'blasr@sha/pbdata_reads_RegionTypeMap.cpp.o' 'blasr@sha/pbdata_reads_ScanData.cpp.o' 'blasr@sha/pbdata_reads_ZMWGroupEntry.cpp.o' 'blasr@sha/pbdata_saf_AlnGroup.cpp.o' 'blasr@sha/pbdata_saf_MovieInfo.cpp.o' 'blasr@sha/pbdata_saf_RefGroup.cpp.o' 'blasr@sha/pbdata_saf_RefInfo.cpp.o' 'blasr@sha/pbdata_sam_ReadGroup.cpp.o' 'blasr@sha/pbdata_sam_ReferenceSequence.cpp.o' 'blasr@sha/pbdata_sam_SAMAlignment.cpp.o' 'blasr@sha/pbdata_sam_SAMHeader.cpp.o' 'blasr@sha/pbdata_sam_SAMKeywordValuePair.cpp.o' 'blasr@sha/pbdata_utils_BitUtils.cpp.o' 'blasr@sha/pbdata_utils_SMRTReadUtils.cpp.o' 'blasr@sha/pbdata_utils_SMRTTitle.cpp.o' 'blasr@sha/pbdata_utils_TimeUtils.cpp.o' 'blasr@sha/pbdata_BlasrFASTAReader.cpp.o' 'blasr@sha/pbdata_BlasrFASTQReader.cpp.o' 'blasr@sha/pbdata_CCSSequence.cpp.o' 'blasr@sha/pbdata_ChangeListID.cpp.o' 'blasr@sha/pbdata_CommandLineParser.cpp.o' 'blasr@sha/pbdata_DNASequence.cpp.o' 'blasr@sha/pbdata_FASTASequence.cpp.o' 'blasr@sha/pbdata_FASTQSequence.cpp.o' 'blasr@sha/pbdata_GFFFile.cpp.o' 'blasr@sha/pbdata_MD5Utils.cpp.o' 'blasr@sha/pbdata_NucConversion.cpp.o' 'blasr@sha/pbdata_PackedDNASequence.cpp.o' 'blasr@sha/pbdata_ReverseCompressIndex.cpp.o' 'blasr@sha/pbdata_SMRTSequence.cpp.o' 'blasr@sha/pbdata_StringUtils.cpp.o' -Wl,--as-needed -Wl,--no-undefined -shared -fPIC -Wl,--start-group -Wl,-soname,libblasr.so.5.3.3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,-z,relro -Wl,-z,now /usr/lib/aarch64-linux-gnu/libpbbam.so /usr/lib/aarch64-linux-gnu/libpbcopper.so /usr/lib/aarch64-linux-gnu/libz.so -lrt /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5_hl_cpp.so /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -Wl,--end-group [140/186] /usr/bin/meson --internal symbolextractor libblasr.so.5.3.3 'blasr@sha/libblasr.so.5.3.3.symbols' --cross-host=linux [141/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/alignment_files_FragmentCCSIterator_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/alignment_files_FragmentCCSIterator_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/alignment_files_FragmentCCSIterator_gtest.cpp.o' -c ../unittest/alignment/files/FragmentCCSIterator_gtest.cpp [142/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/alignment_files_CCSIterator_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/alignment_files_CCSIterator_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/alignment_files_CCSIterator_gtest.cpp.o' -c ../unittest/alignment/files/CCSIterator_gtest.cpp [143/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/alignment_files_ReaderAgglomerate_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/alignment_files_ReaderAgglomerate_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/alignment_files_ReaderAgglomerate_gtest.cpp.o' -c ../unittest/alignment/files/ReaderAgglomerate_gtest.cpp [144/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/alignment_files_FragmentCCSIterator_other_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/alignment_files_FragmentCCSIterator_other_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/alignment_files_FragmentCCSIterator_other_gtest.cpp.o' -c ../unittest/alignment/files/FragmentCCSIterator_other_gtest.cpp [145/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/alignment_format_SAMPrinter_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/alignment_format_SAMPrinter_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/alignment_format_SAMPrinter_gtest.cpp.o' -c ../unittest/alignment/format/SAMPrinter_gtest.cpp [146/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/alignment_format_SAMHeaderPrinter_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/alignment_format_SAMHeaderPrinter_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/alignment_format_SAMHeaderPrinter_gtest.cpp.o' -c ../unittest/alignment/format/SAMHeaderPrinter_gtest.cpp [147/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/alignment_datastructures_alignment_CmpIndexedStringTable_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/alignment_datastructures_alignment_CmpIndexedStringTable_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/alignment_datastructures_alignment_CmpIndexedStringTable_gtest.cpp.o' -c ../unittest/alignment/datastructures/alignment/CmpIndexedStringTable_gtest.cpp [148/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/alignment_datastructures_alignment_AlignmentMap_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/alignment_datastructures_alignment_AlignmentMap_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/alignment_datastructures_alignment_AlignmentMap_gtest.cpp.o' -c ../unittest/alignment/datastructures/alignment/AlignmentMap_gtest.cpp [149/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/alignment_query_SequentialZmwGroupQuery_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/alignment_query_SequentialZmwGroupQuery_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/alignment_query_SequentialZmwGroupQuery_gtest.cpp.o' -c ../unittest/alignment/query/SequentialZmwGroupQuery_gtest.cpp [150/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/alignment_query_PbiFilterZmwGroupQuery_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/alignment_query_PbiFilterZmwGroupQuery_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/alignment_query_PbiFilterZmwGroupQuery_gtest.cpp.o' -c ../unittest/alignment/query/PbiFilterZmwGroupQuery_gtest.cpp [151/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/alignment_utils_FileUtils_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/alignment_utils_FileUtils_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/alignment_utils_FileUtils_gtest.cpp.o' -c ../unittest/alignment/utils/FileUtils_gtest.cpp [152/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/alignment_utils_RangeUtils_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/alignment_utils_RangeUtils_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/alignment_utils_RangeUtils_gtest.cpp.o' -c ../unittest/alignment/utils/RangeUtils_gtest.cpp [153/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/alignment_utils_RegionUtils_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/alignment_utils_RegionUtils_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/alignment_utils_RegionUtils_gtest.cpp.o' -c ../unittest/alignment/utils/RegionUtils_gtest.cpp [154/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFScanDataWriter_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFScanDataWriter_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFScanDataWriter_gtest.cpp.o' -c ../unittest/hdf/HDFScanDataWriter_gtest.cpp [155/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFCCSReader_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFCCSReader_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFCCSReader_gtest.cpp.o' -c ../unittest/hdf/HDFCCSReader_gtest.cpp [156/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFZMWReader_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFZMWReader_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFZMWReader_gtest.cpp.o' -c ../unittest/hdf/HDFZMWReader_gtest.cpp [157/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFPlsReader_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFPlsReader_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFPlsReader_gtest.cpp.o' -c ../unittest/hdf/HDFPlsReader_gtest.cpp [158/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/hdf_HDF2DArray_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/hdf_HDF2DArray_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/hdf_HDF2DArray_gtest.cpp.o' -c ../unittest/hdf/HDF2DArray_gtest.cpp [159/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFUtils_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFUtils_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFUtils_gtest.cpp.o' -c ../unittest/hdf/HDFUtils_gtest.cpp [160/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFBasReader_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFBasReader_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFBasReader_gtest.cpp.o' -c ../unittest/hdf/HDFBasReader_gtest.cpp [161/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFScanDataReader_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFScanDataReader_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFScanDataReader_gtest.cpp.o' -c ../unittest/hdf/HDFScanDataReader_gtest.cpp [162/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_metagenome_TitleTable_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_metagenome_TitleTable_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_metagenome_TitleTable_gtest.cpp.o' -c ../unittest/pbdata/metagenome/TitleTable_gtest.cpp [163/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_saf_RefInfo_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_saf_RefInfo_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_saf_RefInfo_gtest.cpp.o' -c ../unittest/pbdata/saf/RefInfo_gtest.cpp [164/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_saf_MovieInfo_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_saf_MovieInfo_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_saf_MovieInfo_gtest.cpp.o' -c ../unittest/pbdata/saf/MovieInfo_gtest.cpp [165/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_saf_AlnGroup_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_saf_AlnGroup_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_saf_AlnGroup_gtest.cpp.o' -c ../unittest/pbdata/saf/AlnGroup_gtest.cpp [166/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_utils_SMRTTitle_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_utils_SMRTTitle_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_utils_SMRTTitle_gtest.cpp.o' -c ../unittest/pbdata/utils/SMRTTitle_gtest.cpp [167/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_qvs_QualityValueVector_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_qvs_QualityValueVector_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_qvs_QualityValueVector_gtest.cpp.o' -c ../unittest/pbdata/qvs/QualityValueVector_gtest.cpp [168/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_reads_RegionTypeMap_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_reads_RegionTypeMap_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_reads_RegionTypeMap_gtest.cpp.o' -c ../unittest/pbdata/reads/RegionTypeMap_gtest.cpp [169/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_reads_ReadType_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_reads_ReadType_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_reads_ReadType_gtest.cpp.o' -c ../unittest/pbdata/reads/ReadType_gtest.cpp [170/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_reads_RegionAnnotations_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_reads_RegionAnnotations_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_reads_RegionAnnotations_gtest.cpp.o' -c ../unittest/pbdata/reads/RegionAnnotations_gtest.cpp [171/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_ScanData_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_ScanData_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_ScanData_gtest.cpp.o' -c ../unittest/pbdata/ScanData_gtest.cpp [172/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_StringUtils_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_StringUtils_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_StringUtils_gtest.cpp.o' -c ../unittest/pbdata/StringUtils_gtest.cpp [173/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_SMRTSequence_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_SMRTSequence_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_SMRTSequence_gtest.cpp.o' -c ../unittest/pbdata/SMRTSequence_gtest.cpp [174/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_NucConversion_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_NucConversion_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_NucConversion_gtest.cpp.o' -c ../unittest/pbdata/NucConversion_gtest.cpp [175/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_VectorUtils_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_VectorUtils_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_VectorUtils_gtest.cpp.o' -c ../unittest/pbdata/VectorUtils_gtest.cpp [176/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_defs_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_defs_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_defs_gtest.cpp.o' -c ../unittest/pbdata/defs_gtest.cpp [177/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_FASTASequence_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_FASTASequence_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_FASTASequence_gtest.cpp.o' -c ../unittest/pbdata/FASTASequence_gtest.cpp [178/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_ChangeListID_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_ChangeListID_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_ChangeListID_gtest.cpp.o' -c ../unittest/pbdata/ChangeListID_gtest.cpp [179/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_FASTQReader_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_FASTQReader_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_FASTQReader_gtest.cpp.o' -c ../unittest/pbdata/FASTQReader_gtest.cpp [180/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_SeqUtils_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_SeqUtils_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_SeqUtils_gtest.cpp.o' -c ../unittest/pbdata/SeqUtils_gtest.cpp [181/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_CCSSequence_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_CCSSequence_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_CCSSequence_gtest.cpp.o' -c ../unittest/pbdata/CCSSequence_gtest.cpp [182/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_utils_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_utils_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_utils_gtest.cpp.o' -c ../unittest/pbdata/utils_gtest.cpp [183/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_FASTQSequence_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_FASTQSequence_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_FASTQSequence_gtest.cpp.o' -c ../unittest/pbdata/FASTQSequence_gtest.cpp [184/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_DNASequence_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_DNASequence_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_DNASequence_gtest.cpp.o' -c ../unittest/pbdata/DNASequence_gtest.cpp [185/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/df08227@@libblasr_unittest@exe -Iunittest -I../unittest -I. -I../ -I/usr/include/hdf5/serial -I/usr/lib/aarch64-linux-gnu/pkgconfig/../../include -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ 'unittest/df08227@@libblasr_unittest@exe/pbdata_FASTAReader_gtest.cpp.o' -MF 'unittest/df08227@@libblasr_unittest@exe/pbdata_FASTAReader_gtest.cpp.o.d' -o 'unittest/df08227@@libblasr_unittest@exe/pbdata_FASTAReader_gtest.cpp.o' -c ../unittest/pbdata/FASTAReader_gtest.cpp [186/186] /usr/bin/aarch64-linux-gnu-g++ -o unittest/libblasr_unittest 'unittest/df08227@@libblasr_unittest@exe/alignment_files_FragmentCCSIterator_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/alignment_files_CCSIterator_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/alignment_files_ReaderAgglomerate_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/alignment_files_FragmentCCSIterator_other_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/alignment_format_SAMPrinter_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/alignment_format_SAMHeaderPrinter_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/alignment_datastructures_alignment_CmpIndexedStringTable_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/alignment_datastructures_alignment_AlignmentMap_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/alignment_query_SequentialZmwGroupQuery_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/alignment_query_PbiFilterZmwGroupQuery_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/alignment_utils_FileUtils_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/alignment_utils_RangeUtils_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/alignment_utils_RegionUtils_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFScanDataWriter_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFCCSReader_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFZMWReader_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFPlsReader_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/hdf_HDF2DArray_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFUtils_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFBasReader_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/hdf_HDFScanDataReader_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_metagenome_TitleTable_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_saf_RefInfo_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_saf_MovieInfo_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_saf_AlnGroup_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_utils_SMRTTitle_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_qvs_QualityValueVector_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_reads_RegionTypeMap_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_reads_ReadType_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_reads_RegionAnnotations_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_ScanData_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_StringUtils_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_SMRTSequence_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_NucConversion_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_VectorUtils_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_defs_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_FASTASequence_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_ChangeListID_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_FASTQReader_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_SeqUtils_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_CCSSequence_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_utils_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_FASTQSequence_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_DNASequence_gtest.cpp.o' 'unittest/df08227@@libblasr_unittest@exe/pbdata_FASTAReader_gtest.cpp.o' -Wl,--as-needed -Wl,--no-undefined -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,-z,relro -Wl,-z,now -Wl,--start-group libblasr.so.5.3.3 /usr/lib/aarch64-linux-gnu/libpbbam.so /usr/lib/aarch64-linux-gnu/libpbcopper.so /usr/lib/aarch64-linux-gnu/libz.so -lrt /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5_hl_cpp.so /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/aarch64-linux-gnu/libgtest_main.a -lpthread /usr/lib/aarch64-linux-gnu/libgtest.a -Wl,--end-group '-Wl,-rpath,$ORIGIN/..' -Wl,-rpath-link,/<>/obj-aarch64-linux-gnu/ create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' mkdir -p debian/libpbdata-dev/usr/include/pbseq cp -r pbdata debian/libpbdata-dev/usr/include/pbseq/ mkdir -p debian/libpbihdf-dev/usr/include/pbseq/ cp -r hdf debian/libpbihdf-dev/usr/include/pbseq/ mkdir -p debian/libblasr-dev/usr/include/pbseq/ cp -r alignment debian/libblasr-dev/usr/include/pbseq/ find -L debian/*/usr/include/ -type f -regextype posix-egrep -not -regex '.*(hpp|h)$' -delete find debian/*/usr/include/ -name "*.mk" -delete dh_auto_install cd obj-aarch64-linux-gnu && DESTDIR=/<>/pbseqlib-5.3.3\+dfsg/debian/tmp LC_ALL=C.UTF-8 ninja install [0/1] Installing files. Installing libblasr.so.5.3.3 to /<>/debian/tmp/usr/lib/aarch64-linux-gnu Installing /<>/obj-aarch64-linux-gnu/LibBlasrConfig.h to /<>/debian/tmp/usr/include/libblasr Installing /<>/hdf/BufferedHDF2DArray.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/BufferedHDF2DArrayImpl.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/BufferedHDFArray.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/BufferedHDFArrayImpl.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/DatasetCollection.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/DatasetCollectionImpl.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDF2DArray.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFAlnGroupGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFAlnGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFAlnInfoGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFArray.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFAtom.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFAttributable.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFBaseCallsWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFBasReader.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFBasWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFBaxWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFCCSReader.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFCmpData.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFCmpExperimentGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFCmpFile.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFCmpReader.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFCmpRefAlignmentGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFCmpRootGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFCmpSupportedFields.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFCommonFG.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFConfig.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFData.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFFile.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFFileLogGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFMovieInfoGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFNewBasReader.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFPlsReader.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFPlsWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFPulseCallsWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFPulseDataFile.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFPulseWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFRefGroupGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFRefInfoGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFRegionsWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFRegionTableReader.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFRegionTableWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFScanDataReader.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFScanDataWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFSentinalFile.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFSMRTSequenceReader.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFUtils.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFWriteBuffer.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFWriterBase.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFZMWMetricsWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFZMWReader.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFZMWWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/alignment/algorithms/alignment/sdp/FragmentSort.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/sdp/FragmentSortImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/sdp/NonoverlappingSparseDynamicProgramming.h to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/sdp/SDPColumn.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/sdp/SDPFragment.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/sdp/SDPSet.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/sdp/SDPSetImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/sdp/SparseDynamicProgramming.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/sdp/SparseDynamicProgrammingImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/sdp/VariableLengthSDPFragment.h to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/AffineGuidedAlign.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/AffineKBandAlign.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/AlignmentFormats.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/AlignmentUtils.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/AlignmentUtilsImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/BaseScoreFunction.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/DistanceMatrixScoreFunction.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/DistanceMatrixScoreFunctionImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/ExtendAlign.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/FullQVAlign.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/GraphPaper.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/GraphPaperImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/GuidedAlign.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/IDSScoreFunction.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/KBandAlign.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/OneGapAlignment.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/QualityValueScoreFunction.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/ScoreMatrices.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/SDPAlign.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/SDPAlignImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/StringToScoreMatrix.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/SWAlign.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/SWAlignImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/anchoring/BasicEndpoint.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/BasicEndpointImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/BWTSearch.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/BWTSearchImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/ClusterProbability.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/Coordinate.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/FindMaxInterval.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/FindMaxIntervalImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/GlobalChain.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/GlobalChainImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/LISPValue.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/LISPValueImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/LISPValueWeightor.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/LISPValueWeightorImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/LISQValueWeightor.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/LISSizeWeightor.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/LISSizeWeightorImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/LongestIncreasingSubsequence.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/LongestIncreasingSubsequenceImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/MapBySuffixArray.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/MapBySuffixArrayImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/PrioritySearchTree.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/PrioritySearchTreeImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/ScoreAnchors.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/ScoreAnchorsImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/compare/CompareStrings.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/compare Installing /<>/alignment/algorithms/sorting/DifferenceCovers.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/sorting Installing /<>/alignment/algorithms/sorting/Karkkainen.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/sorting Installing /<>/alignment/algorithms/sorting/LightweightSuffixArray.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/sorting Installing /<>/alignment/algorithms/sorting/MultikeyQuicksort.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/sorting Installing /<>/alignment/algorithms/sorting/qsufsort.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/sorting Installing /<>/alignment/bwt/BWT.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/bwt Installing /<>/alignment/bwt/Occ.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/bwt Installing /<>/alignment/bwt/PackedHash.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/bwt Installing /<>/alignment/bwt/Pos.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/bwt Installing /<>/alignment/datastructures/alignment/AlignedPair.h to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/AlignmentCandidate.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/AlignmentContext.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/AlignmentGapList.h to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/Alignment.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/AlignmentMap.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/AlignmentStats.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/ByteAlignment.h to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/CmpFile.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/CmpIndexedStringTable.h to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/CmpReadGroupTable.h to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/CmpRefSeqTable.h to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/FilterCriteria.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/Path.h to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/SAMToAlignmentCandidateAdapter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignmentset/AlignmentSetToCmpH5Adapter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignmentset Installing /<>/alignment/datastructures/alignmentset/AlignmentSetToCmpH5AdapterImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignmentset Installing /<>/alignment/datastructures/alignmentset/SAMQVConversion.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignmentset Installing /<>/alignment/datastructures/alignmentset/SAMSupplementalQVList.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignmentset Installing /<>/alignment/datastructures/anchoring/AnchorParameters.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/anchoring Installing /<>/alignment/datastructures/anchoring/ClusterList.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/anchoring Installing /<>/alignment/datastructures/anchoring/MatchPos.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/anchoring Installing /<>/alignment/datastructures/anchoring/WeightedInterval.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/anchoring Installing /<>/alignment/files/BaseSequenceIO.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/files Installing /<>/alignment/files/CCSIterator.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/files Installing /<>/alignment/files/FragmentCCSIterator.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/files Installing /<>/alignment/files/ReaderAgglomerate.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/files Installing /<>/alignment/files/ReaderAgglomerateImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/files Installing /<>/alignment/format/BAMPrinter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/BAMPrinterImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/CompareSequencesPrinter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/CompareSequencesPrinterImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/IntervalPrinter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/SAMHeaderPrinter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/SAMPrinter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/SAMPrinterImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/StickAlignmentPrinter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/SummaryPrinter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/VulgarPrinter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/XMLPrinter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/ipc/SharedMemoryAllocator.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/ipc Installing /<>/alignment/query/PbiFilterZmwGroupQuery.h to /<>/debian/tmp/usr/include/libblasr/alignment/query Installing /<>/alignment/query/SequentialZmwGroupQuery.h to /<>/debian/tmp/usr/include/libblasr/alignment/query Installing /<>/alignment/qvs/QualityValueProfile.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/qvs Installing /<>/alignment/simulator/CDFMap.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/simulator/ContextOutputList.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/simulator/ContextSample.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/simulator/ContextSet.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/simulator/LengthHistogram.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/simulator/OutputList.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/simulator/OutputSample.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/simulator/OutputSampleList.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/simulator/OutputSampleListSet.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/simulator/QualitySample.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/statistics/AnchorDistributionTable.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/statistics Installing /<>/alignment/statistics/cdfs.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/statistics Installing /<>/alignment/statistics/LookupAnchorDistribution.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/statistics Installing /<>/alignment/statistics/pdfs.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/statistics Installing /<>/alignment/statistics/StatUtils.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/statistics Installing /<>/alignment/statistics/StatUtilsImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/statistics Installing /<>/alignment/statistics/VarianceAccumulator.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/statistics Installing /<>/alignment/statistics/VarianceAccumulatorImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/statistics Installing /<>/alignment/suffixarray/LCPTable.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/suffixarray Installing /<>/alignment/suffixarray/SharedSuffixArray.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/suffixarray Installing /<>/alignment/suffixarray/ssort.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/suffixarray Installing /<>/alignment/suffixarray/SuffixArray.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/suffixarray Installing /<>/alignment/suffixarray/SuffixArrayTypes.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/suffixarray Installing /<>/alignment/tuples/BaseTuple.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/CompressedDNATuple.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/CountedTuple.h to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/DNATuple.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/DNATupleImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/DNATupleList.h to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/HashedTupleList.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/HashedTupleListImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleCountTable.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleCountTableImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/tuple.h to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleList.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleListImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleMask.h to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleMatching.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleMatchingImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleMetrics.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleOperations.h to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleTranslations.h to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/utils/FileOfFileNames.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/utils Installing /<>/alignment/utils/FileUtils.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/utils Installing /<>/alignment/utils/LogUtils.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/utils Installing /<>/alignment/utils/PhredUtils.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/utils Installing /<>/alignment/utils/RangeUtils.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/utils Installing /<>/alignment/utils/RegionUtils.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/utils Installing /<>/alignment/utils/RegionUtilsImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/utils Installing /<>/alignment/utils/SimpleXMLUtils.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/utils Installing /<>/alignment/MappingMetrics.hpp to /<>/debian/tmp/usr/include/libblasr/alignment Installing /<>/pbdata/alignment/CmpAlignment.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/alignment Installing /<>/pbdata/alignment/CmpAlignmentImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/alignment Installing /<>/pbdata/amos/AfgBasWriter.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/amos Installing /<>/pbdata/loadpulses/MetricField.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/loadpulses Installing /<>/pbdata/loadpulses/MovieAlnIndexLookupTable.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/loadpulses Installing /<>/pbdata/matrix/FlatMatrix.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/matrix Installing /<>/pbdata/matrix/FlatMatrixImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/matrix Installing /<>/pbdata/matrix/Matrix.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/matrix Installing /<>/pbdata/matrix/MatrixImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/matrix Installing /<>/pbdata/metagenome/FindRandomSequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/metagenome Installing /<>/pbdata/metagenome/SequenceIndexDatabase.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/metagenome Installing /<>/pbdata/metagenome/SequenceIndexDatabaseImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/metagenome Installing /<>/pbdata/metagenome/TitleTable.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/metagenome Installing /<>/pbdata/qvs/QualityTransform.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/qvs Installing /<>/pbdata/qvs/QualityValue.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/qvs Installing /<>/pbdata/qvs/QualityValueVector.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/qvs Installing /<>/pbdata/qvs/QualityValueVectorImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/qvs Installing /<>/pbdata/qvs/QualityTransform.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/qvs Installing /<>/pbdata/qvs/QualityValue.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/qvs Installing /<>/pbdata/qvs/QualityValueVector.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/qvs Installing /<>/pbdata/qvs/QualityValueVectorImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/qvs Installing /<>/pbdata/reads/AcqParams.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/BaseFile.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/BaseFileImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/HoleXY.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/PulseBaseCommon.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/PulseFile.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/PulseFileImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/ReadInterval.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/ReadType.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/RegionAnnotation.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/RegionAnnotations.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/RegionTable.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/RegionTypeMap.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/ScanData.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/ZMWGroupEntry.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/saf/AlnGroup.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/saf Installing /<>/pbdata/saf/AlnInfo.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/saf Installing /<>/pbdata/saf/MovieInfo.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/saf Installing /<>/pbdata/saf/RefGroup.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/saf Installing /<>/pbdata/saf/RefInfo.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/saf Installing /<>/pbdata/sam/AlignmentSet.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/AlignmentSetImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/CigarString.h to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/ReadGroup.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/ReferenceSequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/SAMAlignment.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/SAMFlag.h to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/SAMHeader.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/SAMKeywordValuePair.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/SAMKeywordValuePairImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/SAMReader.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/SAMReaderImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/utils/BitUtils.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/utils Installing /<>/pbdata/utils/SMRTReadUtils.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/utils Installing /<>/pbdata/utils/SMRTTitle.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/utils Installing /<>/pbdata/utils/TimeUtils.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/utils Installing /<>/pbdata/CCSSequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/ChangeListID.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/CommandLineParser.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/Compare4BitCompressed.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/CompressedDNASequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/CompressedSequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/CompressedSequenceImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/defs.h to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/DNASequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/Enumerations.h to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/FASTAReader.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/FASTASequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/FASTQReader.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/FASTQSequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/GFFFile.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/MD5Utils.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/MD5UtilsImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/NucConversion.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/PacBioDefs.h to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/PackedDNASequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/PrettyException.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/ReverseCompressIndex.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/SeqUtils.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/SeqUtilsImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/SMRTSequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/StringUtils.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/Types.h to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/utils.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/utilsImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/VectorUtils.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/obj-aarch64-linux-gnu/meson-private/libblasr.pc to /<>/debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig make[1]: Leaving directory '/<>' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_missing: warning: usr/include/libblasr/pbdata/VectorUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/utilsImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/utils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/Types.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/StringUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/SMRTSequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/SeqUtilsImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/SeqUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/ReverseCompressIndex.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/PrettyException.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/PackedDNASequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/PacBioDefs.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/NucConversion.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/MD5UtilsImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/MD5Utils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/GFFFile.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/FASTQSequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/FASTQReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/FASTASequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/FASTAReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/Enumerations.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/DNASequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/defs.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/CompressedSequenceImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/CompressedSequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/CompressedDNASequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/Compare4BitCompressed.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/CommandLineParser.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/ChangeListID.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/CCSSequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/utils/TimeUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/utils/SMRTTitle.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/utils/SMRTReadUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/utils/BitUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/SAMReaderImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/SAMReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/SAMKeywordValuePairImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/SAMKeywordValuePair.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/SAMHeader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/SAMFlag.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/SAMAlignment.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/ReferenceSequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/ReadGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/CigarString.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/AlignmentSetImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/AlignmentSet.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/saf/RefInfo.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/saf/RefGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/saf/MovieInfo.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/saf/AlnInfo.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/saf/AlnGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/ZMWGroupEntry.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/ScanData.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/RegionTypeMap.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/RegionTable.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/RegionAnnotations.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/RegionAnnotation.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/ReadType.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/ReadInterval.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/PulseFileImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/PulseFile.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/PulseBaseCommon.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/HoleXY.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/BaseFileImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/BaseFile.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/AcqParams.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/qvs/QualityValueVectorImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/qvs/QualityValueVector.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/qvs/QualityValue.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/qvs/QualityTransform.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/metagenome/TitleTable.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/metagenome/SequenceIndexDatabaseImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/metagenome/SequenceIndexDatabase.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/metagenome/FindRandomSequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/matrix/MatrixImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/matrix/Matrix.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/matrix/FlatMatrixImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/matrix/FlatMatrix.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/loadpulses/MovieAlnIndexLookupTable.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/loadpulses/MetricField.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/amos/AfgBasWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/alignment/CmpAlignmentImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/alignment/CmpAlignment.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/MappingMetrics.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/utils/SimpleXMLUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/utils/RegionUtilsImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/utils/RegionUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/utils/RangeUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/utils/PhredUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/utils/LogUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/utils/FileUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/utils/FileOfFileNames.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleTranslations.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleOperations.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleMetrics.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleMatchingImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleMatching.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleMask.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleListImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleList.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/tuple.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleCountTableImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleCountTable.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/HashedTupleListImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/HashedTupleList.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/DNATupleList.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/DNATupleImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/DNATuple.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/CountedTuple.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/CompressedDNATuple.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/BaseTuple.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/suffixarray/SuffixArrayTypes.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/suffixarray/SuffixArray.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/suffixarray/ssort.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/suffixarray/SharedSuffixArray.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/suffixarray/LCPTable.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/statistics/VarianceAccumulatorImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/statistics/VarianceAccumulator.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/statistics/StatUtilsImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/statistics/StatUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/statistics/pdfs.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/statistics/LookupAnchorDistribution.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/statistics/cdfs.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/statistics/AnchorDistributionTable.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/QualitySample.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/OutputSampleListSet.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/OutputSampleList.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/OutputSample.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/OutputList.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/LengthHistogram.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/ContextSet.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/ContextSample.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/ContextOutputList.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/CDFMap.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/qvs/QualityValueProfile.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/query/SequentialZmwGroupQuery.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/query/PbiFilterZmwGroupQuery.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/ipc/SharedMemoryAllocator.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/XMLPrinter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/VulgarPrinter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/SummaryPrinter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/StickAlignmentPrinter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/SAMPrinterImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/SAMPrinter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/SAMHeaderPrinter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/IntervalPrinter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/CompareSequencesPrinterImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/CompareSequencesPrinter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/BAMPrinterImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/BAMPrinter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/files/ReaderAgglomerateImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/files/ReaderAgglomerate.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/files/FragmentCCSIterator.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/files/CCSIterator.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/files/BaseSequenceIO.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/anchoring/WeightedInterval.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/anchoring/MatchPos.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/anchoring/ClusterList.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/anchoring/AnchorParameters.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignmentset/SAMSupplementalQVList.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignmentset/SAMQVConversion.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignmentset/AlignmentSetToCmpH5AdapterImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignmentset/AlignmentSetToCmpH5Adapter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/SAMToAlignmentCandidateAdapter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/Path.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/FilterCriteria.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/CmpRefSeqTable.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/CmpReadGroupTable.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/CmpIndexedStringTable.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/CmpFile.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/ByteAlignment.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/AlignmentStats.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/AlignmentMap.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/Alignment.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/AlignmentGapList.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/AlignmentContext.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/AlignmentCandidate.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/AlignedPair.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/bwt/Pos.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/bwt/PackedHash.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/bwt/Occ.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/bwt/BWT.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/sorting/qsufsort.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/sorting/MultikeyQuicksort.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/sorting/LightweightSuffixArray.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/sorting/Karkkainen.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/sorting/DifferenceCovers.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/compare/CompareStrings.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/ScoreAnchorsImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/ScoreAnchors.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/PrioritySearchTreeImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/PrioritySearchTree.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/MapBySuffixArrayImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/MapBySuffixArray.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/LongestIncreasingSubsequenceImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/LongestIncreasingSubsequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/LISSizeWeightorImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/LISSizeWeightor.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/LISQValueWeightor.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/LISPValueWeightorImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/LISPValueWeightor.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/LISPValueImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/LISPValue.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/GlobalChainImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/GlobalChain.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/FindMaxIntervalImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/FindMaxInterval.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/Coordinate.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/ClusterProbability.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/BWTSearchImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/BWTSearch.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/BasicEndpointImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/BasicEndpoint.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/SWAlignImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/SWAlign.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/StringToScoreMatrix.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/SDPAlignImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/SDPAlign.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/ScoreMatrices.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/QualityValueScoreFunction.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/OneGapAlignment.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/KBandAlign.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/IDSScoreFunction.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/GuidedAlign.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/GraphPaperImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/GraphPaper.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/FullQVAlign.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/ExtendAlign.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/DistanceMatrixScoreFunctionImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/DistanceMatrixScoreFunction.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/BaseScoreFunction.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/AlignmentUtilsImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/AlignmentUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/AlignmentFormats.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/AffineKBandAlign.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/AffineGuidedAlign.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/VariableLengthSDPFragment.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/SparseDynamicProgrammingImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/SparseDynamicProgramming.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/SDPSetImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/SDPSet.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/SDPFragment.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/SDPColumn.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/NonoverlappingSparseDynamicProgramming.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/FragmentSortImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/FragmentSort.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFZMWWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFZMWReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFZMWMetricsWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFWriterBase.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFWriteBuffer.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFSMRTSequenceReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFSentinalFile.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFScanDataWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFScanDataReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFRegionTableWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFRegionTableReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFRegionsWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFRefInfoGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFRefGroupGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFPulseWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFPulseDataFile.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFPulseCallsWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFPlsWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFPlsReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFNewBasReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFMovieInfoGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFFileLogGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFFile.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFData.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFConfig.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFCommonFG.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFCmpSupportedFields.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFCmpRootGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFCmpRefAlignmentGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFCmpReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFCmpFile.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFCmpExperimentGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFCmpData.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFCCSReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFBaxWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFBasWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFBasReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFBaseCallsWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFAttributable.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFAtom.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFArray.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFAlnInfoGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFAlnGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFAlnGroupGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDF2DArray.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/DatasetCollectionImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/DatasetCollection.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/BufferedHDFArrayImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/BufferedHDFArray.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/BufferedHDF2DArrayImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/BufferedHDF2DArray.hpp exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: libblasr (1), libblasr-dev (3), libpbdata-dev (0), libpbihdf-dev (0), libpbseq (0), libpbseq-dev (0) * dh_installdocs: libblasr (0), libblasr-dev (0), libpbdata-dev (0), libpbihdf-dev (0), libpbseq (0), libpbseq-dev (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built For a short-term work-around: Add the files to debian/not-installed dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'libpbseq-dev' in '../libpbseq-dev_5.3.3+dfsg-4_arm64.deb'. dpkg-deb: building package 'libblasr-dev' in '../libblasr-dev_5.3.3+dfsg-4_arm64.deb'. dpkg-deb: building package 'libblasr' in '../libblasr_5.3.3+dfsg-4_arm64.deb'. dpkg-deb: building package 'libblasr-dbgsym' in '../libblasr-dbgsym_5.3.3+dfsg-4_arm64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../pbseqlib_5.3.3+dfsg-4_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-01-30T07:14:30Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ pbseqlib_5.3.3+dfsg-4_arm64.changes: ------------------------------------ Format: 1.8 Date: Wed, 29 Jan 2020 15:28:50 +0100 Source: pbseqlib Binary: libblasr libblasr-dbgsym libblasr-dev libpbseq-dev Built-For-Profiles: cross nocheck Architecture: arm64 Version: 5.3.3+dfsg-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: libblasr - tools for aligning PacBio reads to target sequences libblasr-dev - tools for aligning PacBio reads to target sequences (development libpbseq-dev - library for analyzing PacBio sequencing data (development files) Closes: 950093 Changes: pbseqlib (5.3.3+dfsg-4) unstable; urgency=medium . * Breaks+Replaces: libblasr (<< 5.3.3) Closes: #950093 Checksums-Sha1: 27156438f5cb5e33eeda2a8cbae709b97e5520f3 8152012 libblasr-dbgsym_5.3.3+dfsg-4_arm64.deb 439e81e3abe0b26c5dcf3d8fa48124e92b1c39a2 782528 libblasr-dev_5.3.3+dfsg-4_arm64.deb 047668958658103ca2f414a8ee2beed6a907505f 1041928 libblasr_5.3.3+dfsg-4_arm64.deb 5a045cc0be479a68dabfc7e503b0fc331915a42a 5024 libpbseq-dev_5.3.3+dfsg-4_arm64.deb f2625742397bc897b1a598ecdf53c09fb7f9aaf9 7626 pbseqlib_5.3.3+dfsg-4_arm64.buildinfo Checksums-Sha256: 4b4afd7fe9037f6d1e19c9726f8943fa852c6ec23ee351acb15ee2c2a06e8632 8152012 libblasr-dbgsym_5.3.3+dfsg-4_arm64.deb 02705097b2f3948733ff398050dab5ee1de75f773154cdac43d57e6ddc278d62 782528 libblasr-dev_5.3.3+dfsg-4_arm64.deb 7dc9013486b4d895a10a20ef29ab1b77c766aad3ef56536746784a6ed672c08d 1041928 libblasr_5.3.3+dfsg-4_arm64.deb 936a0f11b82c3b0d4cf7fde3bfacee38c318fb5f45870abd742f1b978d87a2a8 5024 libpbseq-dev_5.3.3+dfsg-4_arm64.deb 2b255671b632bd3d8a761bcf800c59f60af013d9a5b989f2d92c9db1e8b4a389 7626 pbseqlib_5.3.3+dfsg-4_arm64.buildinfo Files: 6b0fca0bd7e8a3e7ecd217d4a809ab92 8152012 debug optional libblasr-dbgsym_5.3.3+dfsg-4_arm64.deb 1148d120009965649fb5a58484f4546d 782528 libdevel optional libblasr-dev_5.3.3+dfsg-4_arm64.deb ac10ca9633c67e74197f0fb07273e006 1041928 libs optional libblasr_5.3.3+dfsg-4_arm64.deb 7995cafc802ed4790f45d4989d813700 5024 libdevel optional libpbseq-dev_5.3.3+dfsg-4_arm64.deb 9d875c2f689289a8c87ffa761e7a600d 7626 libs optional pbseqlib_5.3.3+dfsg-4_arm64.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: pbseqlib Binary: libpbseq libpbseq-dev libpbdata-dev libpbihdf-dev libblasr-dev libblasr Architecture: arm64 Version: 5.3.3+dfsg-4 Checksums-Md5: 6b0fca0bd7e8a3e7ecd217d4a809ab92 8152012 libblasr-dbgsym_5.3.3+dfsg-4_arm64.deb 1148d120009965649fb5a58484f4546d 782528 libblasr-dev_5.3.3+dfsg-4_arm64.deb ac10ca9633c67e74197f0fb07273e006 1041928 libblasr_5.3.3+dfsg-4_arm64.deb 7995cafc802ed4790f45d4989d813700 5024 libpbseq-dev_5.3.3+dfsg-4_arm64.deb Checksums-Sha1: 27156438f5cb5e33eeda2a8cbae709b97e5520f3 8152012 libblasr-dbgsym_5.3.3+dfsg-4_arm64.deb 439e81e3abe0b26c5dcf3d8fa48124e92b1c39a2 782528 libblasr-dev_5.3.3+dfsg-4_arm64.deb 047668958658103ca2f414a8ee2beed6a907505f 1041928 libblasr_5.3.3+dfsg-4_arm64.deb 5a045cc0be479a68dabfc7e503b0fc331915a42a 5024 libpbseq-dev_5.3.3+dfsg-4_arm64.deb Checksums-Sha256: 4b4afd7fe9037f6d1e19c9726f8943fa852c6ec23ee351acb15ee2c2a06e8632 8152012 libblasr-dbgsym_5.3.3+dfsg-4_arm64.deb 02705097b2f3948733ff398050dab5ee1de75f773154cdac43d57e6ddc278d62 782528 libblasr-dev_5.3.3+dfsg-4_arm64.deb 7dc9013486b4d895a10a20ef29ab1b77c766aad3ef56536746784a6ed672c08d 1041928 libblasr_5.3.3+dfsg-4_arm64.deb 936a0f11b82c3b0d4cf7fde3bfacee38c318fb5f45870abd742f1b978d87a2a8 5024 libpbseq-dev_5.3.3+dfsg-4_arm64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Thu, 30 Jan 2020 07:14:30 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11.1), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-5), binutils (= 2.33.90.20200122-2), binutils-common (= 2.33.90.20200122-2), binutils-x86-64-linux-gnu (= 2.33.90.20200122-2), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.34-0.1), build-essential (= 12.8), bzip2 (= 1.0.8-2), cmake (= 3.15.4-1), cmake-data (= 3.15.4-1), coreutils (= 8.30-3+b1), cpp (= 4:9.2.1-3.1), cpp-8 (= 8.3.0-26), cpp-9 (= 9.2.1-25), dash (= 0.5.10.2-6), debconf (= 1.5.73), debhelper (= 12.9), debianutils (= 4.9.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.6.3-2), diffutils (= 1:3.7-3), dpkg (= 1.19.7), dpkg-dev (= 1.19.7), dwz (= 0.13-5), fdisk (= 2.34-0.1), file (= 1:5.38-4), findutils (= 4.7.0-1), g++ (= 4:9.2.1-3.1), g++-9 (= 9.2.1-25), gcc (= 4:9.2.1-3.1), gcc-8 (= 8.3.0-26), gcc-8-base (= 8.3.0-26), gcc-9 (= 9.2.1-25), gcc-9-base (= 9.2.1-25), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), googletest (= 1.10.0-2), grep (= 3.4-1), groff-base (= 1.22.4-4), gzip (= 1.9-3+b1), hdf5-helpers (= 1.10.4+repack-10), hostname (= 3.23), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-5), libaec-dev (= 1.0.4-1), libaec0 (= 1.0.4-1), libarchive-zip-perl (= 1.67-1), libarchive13 (= 3.4.0-1+b1), libasan5 (= 9.2.1-25), libatomic1 (= 9.2.1-25), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-2), libaudit1 (= 1:2.8.5-2+b1), libbinutils (= 2.33.90.20200122-2), libblkid1 (= 2.34-0.1), libboost-dev (= 1.67.0.2+b1), libboost1.67-dev (= 1.67.0-17), libbrotli1 (= 1.0.7-6), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.8-2), libc-bin (= 2.29-9), libc-dev-bin (= 2.29-9), libc6 (= 2.29-9), libc6-dev (= 2.29-9), libcap-ng0 (= 0.7.9-2.1+b1), libcc1-0 (= 9.2.1-25), libcom-err2 (= 1.45.5-2), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.10-10), libcrypt1 (= 1:4.4.10-10), libctf-nobfd0 (= 2.33.90.20200122-2), libctf0 (= 2.33.90.20200122-2), libcurl3-gnutls (= 7.67.0-2), libcurl4 (= 7.67.0-2), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.250), libdebhelper-perl (= 12.9), libdeflate0 (= 1.5-1), libdpkg-perl (= 1.19.7), libelf1 (= 0.176-1.1), libexpat1 (= 2.2.9-1), libfdisk1 (= 2.34-0.1), libffi7 (= 3.3-3), libfile-stripnondeterminism-perl (= 1.6.3-2), libgcc-8-dev (= 8.3.0-26), libgcc-9-dev (= 9.2.1-25), libgcc1 (= 1:9.2.1-25), libgcrypt20 (= 1.8.5-3), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libgfortran5 (= 9.2.1-25), libglib2.0-0 (= 2.62.4-1+b1), libgmp10 (= 2:6.1.2+dfsg-4), libgnutls30 (= 3.6.11.1-2), libgomp1 (= 9.2.1-25), libgpg-error0 (= 1.36-7), libgssapi-krb5-2 (= 1.17-6), libgtest-dev (= 1.10.0-2), libhdf5-103 (= 1.10.4+repack-10), libhdf5-cpp-103 (= 1.10.4+repack-10), libhdf5-dev (= 1.10.4+repack-10), libhogweed5 (= 3.5.1+really3.5.1-2), libhts-dev (= 1.10.2-2), libhts3 (= 1.10.2-2), libicu63 (= 63.2-2), libidn2-0 (= 2.2.0-2), libisl22 (= 0.22-2), libitm1 (= 9.2.1-25), libjpeg62-turbo (= 1:1.5.2-2+b1), libjpeg62-turbo-dev (= 1:1.5.2-2+b1), libjsoncpp1 (= 1.7.4-3.1), libk5crypto3 (= 1.17-6), libkeyutils1 (= 1.6-6), libkrb5-3 (= 1.17-6), libkrb5support0 (= 1.17-6), libldap-2.4-2 (= 2.4.48+dfsg-1+b2), libldap-common (= 2.4.48+dfsg-1), liblsan0 (= 9.2.1-25), liblz4-1 (= 1.9.2-2), liblzma-dev (= 5.2.4-1+b1), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-4), libmagic1 (= 1:5.38-4), libmount1 (= 2.34-0.1), libmpc3 (= 1.1.0-1), libmpdec2 (= 2.4.2-2), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-26), libncurses6 (= 6.1+20191019-1), libncursesw6 (= 6.1+20191019-1), libnettle7 (= 3.5.1+really3.5.1-2), libnghttp2-14 (= 1.40.0-1), libp11-kit0 (= 0.23.19-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpbbam-dev (= 1.0.6+dfsg-2), libpbbam1.0.6 (= 1.0.6+dfsg-2), libpbcopper-dev (= 1.3.0+dfsg-3), libpbcopper1.3.0 (= 1.3.0+dfsg-3), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-12+b1), libperl5.30 (= 5.30.0-9), libpipeline1 (= 1.5.2-2), libprocps7 (= 2:3.3.15-2+b1), libpsl5 (= 0.20.2-2), libpython3-stdlib (= 3.7.5-3), libpython3.7-minimal (= 3.7.6-1+b1), libpython3.7-stdlib (= 3.7.6-1+b1), libquadmath0 (= 9.2.1-25), libreadline8 (= 8.0-3), librhash0 (= 1.3.9-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b1), libsasl2-2 (= 2.1.27+dfsg-2), libsasl2-modules-db (= 2.1.27+dfsg-2), libseccomp2 (= 2.4.2-2), libselinux1 (= 3.0-1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.34-0.1), libsqlite3-0 (= 3.31.0+really3.30.1+fossil191229-1), libssh2-1 (= 1.8.0-2.1), libssl-dev (= 1.1.1d-2), libssl1.1 (= 1.1.1d-2), libstdc++-9-dev (= 9.2.1-25), libstdc++6 (= 9.2.1-25), libsub-override-perl (= 0.09-2), libsystemd0 (= 244.1-1), libsz2 (= 1.0.4-1), libtasn1-6 (= 4.15.0-2), libtinfo6 (= 6.1+20191019-1), libtool (= 2.4.6-11), libtsan0 (= 9.2.1-25), libubsan1 (= 9.2.1-25), libuchardet0 (= 0.0.6-3), libudev1 (= 244.1-1), libunistring2 (= 0.9.10-2), libuuid1 (= 2.34-0.1), libuv1 (= 1.33.1-2), libxml2 (= 2.9.4+dfsg1-8), libzstd1 (= 1.4.4+dfsg-1), linux-libc-dev (= 5.4.13-1), login (= 1:4.8-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.2.1-1.2), man-db (= 2.9.0-2), mawk (= 1.3.4.20200120-1), meson (= 0.53.1-1), mime-support (= 3.64), ncurses-base (= 6.1+20191019-1), ncurses-bin (= 6.1+20191019-1), ninja-build (= 1.9.0-3), patch (= 2.7.6-6), perl (= 5.30.0-9), perl-base (= 5.30.0-9), perl-modules-5.30 (= 5.30.0-9), pkg-config (= 0.29-6), po-debconf (= 1.0.21), procps (= 2:3.3.15-2+b1), python3 (= 3.7.5-3), python3-minimal (= 3.7.5-3), python3.7 (= 3.7.6-1+b1), python3.7-minimal (= 3.7.6-1+b1), readline-common (= 8.0-3), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-2.1), tar (= 1.30+dfsg-6+b1), util-linux (= 2.34-0.1), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-1+b1), zlib1g-dev (= 1:1.2.11.dfsg-1+b1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1580308130" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libblasr-dbgsym_5.3.3+dfsg-4_arm64.deb -------------------------------------- new Debian package, version 2.0. size 8152012 bytes: control archive=544 bytes. 385 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: libblasr-dbgsym Source: pbseqlib Version: 5.3.3+dfsg-4 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 8346 Depends: libblasr (= 5.3.3+dfsg-4) Section: debug Priority: optional Description: debug symbols for libblasr Build-Ids: a61d336d3d9c454415742456fefd9cb8d35d3be2 drwxr-xr-x root/root 0 2020-01-29 14:28 ./ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/lib/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/lib/debug/.build-id/a6/ -rw-r--r-- root/root 8535880 2020-01-29 14:28 ./usr/lib/debug/.build-id/a6/1d336d3d9c454415742456fefd9cb8d35d3be2.debug drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/share/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-01-29 14:28 ./usr/share/doc/libblasr-dbgsym -> libblasr libblasr-dev_5.3.3+dfsg-4_arm64.deb ----------------------------------- new Debian package, version 2.0. size 782528 bytes: control archive=5336 bytes. 793 bytes, 19 lines control 16152 bytes, 167 lines md5sums Package: libblasr-dev Source: pbseqlib Version: 5.3.3+dfsg-4 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 4210 Depends: libblasr (= 5.3.3+dfsg-4), libpbdata-dev (= 5.3.3+dfsg-4) Breaks: libblasr (<< 5.3.3) Replaces: libblasr (<< 5.3.3) Section: libdevel Priority: optional Homepage: https://github.com/PacificBiosciences/blasr_libcpp Description: tools for aligning PacBio reads to target sequences (development files) Blasr_libcpp is a library used by blasr and other executables such as samtoh5, loadPulses for analyzing PacBio sequences. This library contains three sub-libraries, including pbdata, hdf and alignment. . 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package, version 2.0. size 1041928 bytes: control archive=944 bytes. 770 bytes, 16 lines control 222 bytes, 3 lines md5sums 40 bytes, 1 lines shlibs 65 bytes, 2 lines triggers Package: libblasr Source: pbseqlib Version: 5.3.3+dfsg-4 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 3121 Depends: libc6 (>= 2.29), libgcc1 (>= 1:3.0), libhdf5-103, libhdf5-cpp-103 (>= 1.10.3), libpbbam1.0.6 (>= 1.0.6+dfsg), libpbcopper1.3.0 (>= 1.3.0+dfsg), libstdc++6 (>= 9) Section: libs Priority: optional Homepage: https://github.com/PacificBiosciences/blasr_libcpp Description: tools for aligning PacBio reads to target sequences Blasr_libcpp is a library used by blasr and other executables such as samtoh5, loadPulses for analyzing PacBio sequences. This library contains three sub-libraries, including pbdata, hdf and alignment. . This package contains the alignment sublibrary. drwxr-xr-x root/root 0 2020-01-29 14:28 ./ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/lib/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/lib/aarch64-linux-gnu/ -rw-r--r-- root/root 3177640 2020-01-29 14:28 ./usr/lib/aarch64-linux-gnu/libblasr.so.5.3.3 drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/share/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/share/doc/libblasr/ -rw-r--r-- root/root 1764 2020-01-29 14:28 ./usr/share/doc/libblasr/changelog.Debian.gz -rw-r--r-- root/root 4760 2020-01-29 14:28 ./usr/share/doc/libblasr/copyright libpbseq-dev_5.3.3+dfsg-4_arm64.deb ----------------------------------- new Debian package, version 2.0. size 5024 bytes: control archive=760 bytes. 753 bytes, 16 lines control 152 bytes, 2 lines md5sums Package: libpbseq-dev Source: pbseqlib Version: 5.3.3+dfsg-4 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 13 Depends: libpbdata-dev (= 5.3.3+dfsg-4), libpbihdf-dev (= 5.3.3+dfsg-4), libblasr-dev (= 5.3.3+dfsg-4) Section: libdevel Priority: optional Homepage: https://github.com/PacificBiosciences/blasr_libcpp Description: library for analyzing PacBio sequencing data (development files) Blasr_libcpp is a library used by blasr and other executables such as samtoh5, loadPulses for analyzing PacBio sequences. This library contains three sub-libraries, including pbdata, hdf and alignment. . This is a metapackage that depends on the pbseqlib component development files. drwxr-xr-x root/root 0 2020-01-29 14:28 ./ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/share/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/share/doc/libpbseq-dev/ -rw-r--r-- root/root 1764 2020-01-29 14:28 ./usr/share/doc/libpbseq-dev/changelog.Debian.gz -rw-r--r-- root/root 4760 2020-01-29 14:28 ./usr/share/doc/libpbseq-dev/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [616 B] Get:5 copy:/<>/apt_archive ./ Packages [705 B] Fetched 2284 B in 0s (149 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libdevel-callchecker-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl librole-tiny-perl libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults t1utils Suggested packages: libxml-parser-perl libdata-dump-perl ca-certificates libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libfreezethaw-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libperl4-corelibs-perl libauthen-sasl-perl libpackage-stash-xs-perl libunicode-utf8-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libdevel-callchecker-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl librole-tiny-perl libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults sbuild-build-depends-lintian-dummy:arm64 t1utils 0 upgraded, 73 newly installed, 0 to remove and 0 not upgraded. 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http://debian.oregonstate.edu/debian unstable/main amd64 libmldbm-perl all 2.05-2 [18.4 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.003006-1 [58.7 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1 [10.2 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b2 [12.0 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.008001-2 [331 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.81+repack-1 [35.4 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2+b1 [91.4 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.48.0 [1309 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 6882 kB in 0s (27.7 MB/s) Selecting previously unselected package netbase. (Reading database ... 39903 files and directories currently installed.) Preparing to unpack .../00-netbase_6.0_all.deb ... Unpacking netbase (6.0) ... Selecting previously unselected package diffstat. Preparing to unpack .../01-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../02-libassuan0_2.5.3-7_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7) ... Selecting previously unselected package gpgconf. Preparing to unpack .../03-gpgconf_2.2.19-1_amd64.deb ... Unpacking gpgconf (2.2.19-1) ... Selecting previously unselected package gpg. Preparing to unpack .../04-gpg_2.2.19-1_amd64.deb ... Unpacking gpg (2.2.19-1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../05-libapt-pkg-perl_0.1.36+b2_amd64.deb ... Unpacking libapt-pkg-perl (0.1.36+b2) ... Selecting previously unselected package libb-hooks-op-check-perl. 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Preparing to unpack .../72-sbuild-build-depends-lintian-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-lintian-dummy:arm64 (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.36+b2) ... Setting up libberkeleydb-perl:amd64 (0.62-1+b1) ... Setting up libstruct-dumb-perl (0.09-1) ... Setting up libdynaloader-functions-perl (0.003-1) ... Setting up libtext-glob-perl (0.10-1) ... Setting up libclass-method-modifiers-perl (2.13-1) ... Setting up liblist-compare-perl (0.53-1) ... Setting up libio-pty-perl (1:1.12-1) ... Setting up libclone-perl (0.43-2) ... Setting up libyaml-0-2:amd64 (0.2.2-1) ... Setting up libsub-identify-perl (0.14-1+b2) ... Setting up libhtml-tagset-perl (3.20-4) ... Setting up libfuture-perl (0.43-1) ... Setting up libyaml-libyaml-perl (0.81+repack-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up perl-openssl-defaults:amd64 (3) ... Setting up libmldbm-perl (2.05-2) ... Setting up libtext-levenshtein-perl (0.13-1) ... Setting up libassuan0:amd64 (2.5.3-7) ... Setting up libnumber-compare-perl (0.03-1) ... Setting up libio-async-perl (0.75-1) ... Setting up patchutils (0.3.4-2+b1) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up libdigest-hmac-perl (1.03+dfsg-2) ... Setting up libipc-system-simple-perl (1.26-1) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up t1utils (1.41-3) ... Setting up liblinux-epoll-perl (0.017-1) ... Setting up diffstat (1.63-1) ... Setting up libvariable-magic-perl (0.62-1+b2) ... Setting up libb-hooks-op-check-perl (0.22-1+b2) ... Setting up libipc-run-perl (20180523.0-2) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3100-1) ... Setting up libsub-name-perl (0.26-1) ... Setting up libpath-tiny-perl (0.108-1) ... Setting up gpgconf (2.2.19-1) ... Setting up librole-tiny-perl (2.001004-1) ... Setting up netbase (6.0) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b3) ... Setting up libexporter-tiny-perl (1.002001-1) ... Setting up libclass-accessor-perl (0.51-1) ... Setting up libfont-ttf-perl (1.06-1) ... Setting up libnet-ip-perl (1.26-2) ... Setting up liburi-perl (1.76-1) ... Setting up gpg (2.2.19-1) ... Setting up libnet-ssleay-perl (1.88-2) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b5) ... Setting up libtype-tiny-perl (1.008001-2) ... Setting up libnet-dns-perl (1.21-1) ... Setting up libdevel-callchecker-perl (0.008-1+b1) ... Setting up libio-async-loop-epoll-perl (0.20-1) ... Setting up libhtml-parser-perl (3.72-3+b4) ... Setting up libio-socket-ssl-perl (2.066-1) ... Setting up libparams-classify-perl (0.015-1+b2) ... Setting up libcgi-pm-perl (4.45-1) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libmailtools-perl (2.21-1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libemail-valid-perl (1.202-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.003006-1) ... Setting up libmoox-aliases-perl (0.001006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.48.0) ... Setting up sbuild-build-depends-lintian-dummy:arm64 (0.invalid.0) ... Processing triggers for man-db (2.9.0-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.29-9) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 359156 Build-Time: 490 Distribution: unstable Foreign Architectures: arm64 Host Architecture: arm64 Install-Time: 33 Job: pbseqlib_5.3.3+dfsg-4 Lintian: pass Machine Architecture: amd64 Package: pbseqlib Package-Time: 535 Source-Version: 5.3.3+dfsg-4 Space: 359156 Status: successful Version: 5.3.3+dfsg-4 -------------------------------------------------------------------------------- Finished at 2020-01-30T07:14:30Z Build needed 00:08:55, 359156k disk space