sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | pbseqlib 5.3.3+dfsg-4 (arm64) Fri, 25 Sep 2020 20:35:02 +0000 | +==============================================================================+ Package: pbseqlib Version: 5.3.3+dfsg-4 Source Version: 5.3.3+dfsg-4 Distribution: unstable Machine Architecture: amd64 Host Architecture: arm64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-73dcc4cb-ef8b-4334-b20e-6cff6c57f0ea' with '<>' I: NOTICE: Log filtering will replace 'build/pbseqlib-2YjUjF/resolver-8cjbzT' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-09-25-0815.42.pdiff [2699 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-09-25-1418.52.pdiff [15.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-09-25-1418.52.pdiff [15.9 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-09-25-0815.42.pdiff [2076 B] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-09-25-1418.52.pdiff [10.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-09-25-1418.52.pdiff [10.9 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main arm64 Packages [8250 kB] Fetched 8484 kB in 2s (5178 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'pbseqlib' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/pbseqlib.git Please use: git clone https://salsa.debian.org/med-team/pbseqlib.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 982 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main pbseqlib 5.3.3+dfsg-4 (dsc) [2429 B] Get:2 http://debian.oregonstate.edu/debian unstable/main pbseqlib 5.3.3+dfsg-4 (tar) [970 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main pbseqlib 5.3.3+dfsg-4 (diff) [8976 B] Fetched 982 kB in 0s (11.1 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/pbseqlib-2YjUjF/pbseqlib-5.3.3+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/pbseqlib-2YjUjF' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), meson, pkg-config, cmake, googletest, libgtest-dev, zlib1g-dev, libhdf5-dev, libboost-dev, libpbbam-dev (>= 0.18.0+dfsg-1~), libpbcopper-dev, libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 Filtered Build-Depends: debhelper-compat (= 12), meson, pkg-config, cmake, googletest, libgtest-dev, zlib1g-dev, libhdf5-dev, libboost-dev, libpbbam-dev (>= 0.18.0+dfsg-1~), libpbcopper-dev, libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [484 B] Get:5 copy:/<>/apt_archive ./ Packages [572 B] Fetched 2013 B in 0s (81.9 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils build-essential cmake cmake-data cpp-10-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-10-aarch64-linux-gnu gcc-10-aarch64-linux-gnu-base gcc-10-base:arm64 gcc-10-cross-base gcc-9-base:arm64 gcc-aarch64-linux-gnu gettext gettext-base googletest groff-base hdf5-helpers:arm64 intltool-debian libaec-dev:arm64 libaec0:arm64 libarchive-zip-perl libarchive13 libasan5:arm64 libasan6-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libboost-dev:arm64 libboost1.71-dev:arm64 libbrotli1 libbrotli1:arm64 libbz2-1.0:arm64 libc6:arm64 libc6-arm64-cross libc6-dev libc6-dev:arm64 libc6-dev-arm64-cross libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:arm64 libcrypt1:arm64 libcurl3-gnutls:arm64 libcurl4 libdb5.3:arm64 libdebhelper-perl libdebian-dpkgcross-perl libdeflate0:arm64 libdpkg-perl libelf1 libexpat1 libffi7:arm64 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-arm64-cross libgcc-9-dev:arm64 libgcc-s1:arm64 libgcc-s1-arm64-cross libgcrypt20:arm64 libgfortran5:arm64 libglib2.0-0 libgmp10:arm64 libgnutls30:arm64 libgomp1:arm64 libgomp1-arm64-cross libgpg-error0:arm64 libgssapi-krb5-2 libgssapi-krb5-2:arm64 libgtest-dev:arm64 libhdf5-103-1:arm64 libhdf5-cpp-103-1:arm64 libhdf5-dev:arm64 libhdf5-fortran-102:arm64 libhdf5-hl-100:arm64 libhdf5-hl-cpp-100:arm64 libhdf5-hl-fortran-100:arm64 libhogweed6:arm64 libhts-dev:arm64 libhts3:arm64 libicu67 libidn2-0:arm64 libio-string-perl libitm1:arm64 libitm1-arm64-cross libjpeg62-turbo:arm64 libjpeg62-turbo-dev:arm64 libjsoncpp1 libk5crypto3 libk5crypto3:arm64 libkeyutils1 libkeyutils1:arm64 libkrb5-3 libkrb5-3:arm64 libkrb5support0 libkrb5support0:arm64 libldap-2.4-2 libldap-2.4-2:arm64 liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross liblzma-dev:arm64 liblzma5:arm64 libmagic-mgc libmagic1 libncurses6 libnettle8:arm64 libnghttp2-14 libnghttp2-14:arm64 libp11-kit0:arm64 libpbbam-dev:arm64 libpbbam1.3.0:arm64 libpbcopper-dev:arm64 libpbcopper1.6.0:arm64 libperl5.30 libpipeline1 libprocps8 libpsl5 libpsl5:arm64 libpython3-stdlib libpython3.8-minimal libpython3.8-stdlib libreadline8 librhash0 librtmp1 librtmp1:arm64 libsasl2-2 libsasl2-2:arm64 libsasl2-modules-db libsasl2-modules-db:arm64 libsigsegv2 libsqlite3-0 libssh2-1 libssh2-1:arm64 libssl-dev:arm64 libssl1.1 libssl1.1:arm64 libstdc++-10-dev libstdc++-10-dev-arm64-cross libstdc++-9-dev:arm64 libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libsz2:arm64 libtasn1-6:arm64 libtool libtsan0:arm64 libtsan0-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libunistring2:arm64 libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db meson mime-support ninja-build perl perl-modules-5.30 pkg-config po-debconf procps python3 python3-minimal python3-pkg-resources python3.8 python3.8-minimal readline-common sensible-utils ucf zlib1g:arm64 zlib1g-dev:arm64 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc cmake-doc gcc-10-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-10-multilib gcc-10-doc manpages-dev flex bison gdb-aarch64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libboost-doc:arm64 libboost1.71-doc:arm64 libboost-atomic1.71-dev:arm64 libboost-chrono1.71-dev:arm64 libboost-container1.71-dev:arm64 libboost-context1.71-dev:arm64 libboost-contract1.71-dev:arm64 libboost-coroutine1.71-dev:arm64 libboost-date-time1.71-dev:arm64 libboost-exception1.71-dev:arm64 libboost-fiber1.71-dev:arm64 libboost-filesystem1.71-dev:arm64 libboost-graph1.71-dev:arm64 libboost-graph-parallel1.71-dev:arm64 libboost-iostreams1.71-dev:arm64 libboost-locale1.71-dev:arm64 libboost-log1.71-dev:arm64 libboost-math1.71-dev:arm64 libboost-mpi1.71-dev:arm64 libboost-mpi-python1.71-dev:arm64 libboost-numpy1.71-dev:arm64 libboost-program-options1.71-dev:arm64 libboost-python1.71-dev:arm64 libboost-random1.71-dev:arm64 libboost-regex1.71-dev:arm64 libboost-serialization1.71-dev:arm64 libboost-stacktrace1.71-dev:arm64 libboost-system1.71-dev:arm64 libboost-test1.71-dev:arm64 libboost-thread1.71-dev:arm64 libboost-timer1.71-dev:arm64 libboost-type-erasure1.71-dev:arm64 libboost-wave1.71-dev:arm64 libboost1.71-tools-dev:arm64 libmpfrc++-dev:arm64 libntl-dev:arm64 glibc-doc:arm64 libc-l10n:arm64 locales:arm64 glibc-doc manpages-dev:arm64 gnupg git bzr rng-tools:arm64 gnutls-bin:arm64 krb5-doc krb5-user krb5-doc:arm64 krb5-user:arm64 libhdf5-doc:arm64 liblzma-doc:arm64 libssl-doc:arm64 libstdc++-10-doc libstdc++-9-doc:arm64 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl python3-doc python3-tk python3-venv python3-setuptools python3.8-venv python3.8-doc binfmt-support readline-doc Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx ca-certificates:arm64 ca-certificates libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpg-error-l10n:arm64 krb5-locales krb5-locales:arm64 libldap-common libldap-common:arm64 libgpm2 publicsuffix publicsuffix:arm64 libsasl2-modules libsasl2-modules:arm64 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils build-essential cmake cmake-data cpp-10-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-10-aarch64-linux-gnu gcc-10-aarch64-linux-gnu-base gcc-10-base:arm64 gcc-10-cross-base gcc-9-base:arm64 gcc-aarch64-linux-gnu gettext gettext-base googletest groff-base hdf5-helpers:arm64 intltool-debian libaec-dev:arm64 libaec0:arm64 libarchive-zip-perl libarchive13 libasan5:arm64 libasan6-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libboost-dev:arm64 libboost1.71-dev:arm64 libbrotli1 libbrotli1:arm64 libbz2-1.0:arm64 libc6:arm64 libc6-arm64-cross libc6-dev libc6-dev:arm64 libc6-dev-arm64-cross libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:arm64 libcrypt1:arm64 libcurl3-gnutls:arm64 libcurl4 libdb5.3:arm64 libdebhelper-perl libdebian-dpkgcross-perl libdeflate0:arm64 libdpkg-perl libelf1 libexpat1 libffi7:arm64 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-arm64-cross libgcc-9-dev:arm64 libgcc-s1:arm64 libgcc-s1-arm64-cross libgcrypt20:arm64 libgfortran5:arm64 libglib2.0-0 libgmp10:arm64 libgnutls30:arm64 libgomp1:arm64 libgomp1-arm64-cross libgpg-error0:arm64 libgssapi-krb5-2 libgssapi-krb5-2:arm64 libgtest-dev:arm64 libhdf5-103-1:arm64 libhdf5-cpp-103-1:arm64 libhdf5-dev:arm64 libhdf5-fortran-102:arm64 libhdf5-hl-100:arm64 libhdf5-hl-cpp-100:arm64 libhdf5-hl-fortran-100:arm64 libhogweed6:arm64 libhts-dev:arm64 libhts3:arm64 libicu67 libidn2-0:arm64 libio-string-perl libitm1:arm64 libitm1-arm64-cross libjpeg62-turbo:arm64 libjpeg62-turbo-dev:arm64 libjsoncpp1 libk5crypto3 libk5crypto3:arm64 libkeyutils1 libkeyutils1:arm64 libkrb5-3 libkrb5-3:arm64 libkrb5support0 libkrb5support0:arm64 libldap-2.4-2 libldap-2.4-2:arm64 liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross liblzma-dev:arm64 liblzma5:arm64 libmagic-mgc libmagic1 libncurses6 libnettle8:arm64 libnghttp2-14 libnghttp2-14:arm64 libp11-kit0:arm64 libpbbam-dev:arm64 libpbbam1.3.0:arm64 libpbcopper-dev:arm64 libpbcopper1.6.0:arm64 libperl5.30 libpipeline1 libprocps8 libpsl5 libpsl5:arm64 libpython3-stdlib libpython3.8-minimal libpython3.8-stdlib libreadline8 librhash0 librtmp1 librtmp1:arm64 libsasl2-2 libsasl2-2:arm64 libsasl2-modules-db libsasl2-modules-db:arm64 libsigsegv2 libsqlite3-0 libssh2-1 libssh2-1:arm64 libssl-dev:arm64 libssl1.1 libssl1.1:arm64 libstdc++-10-dev libstdc++-10-dev-arm64-cross libstdc++-9-dev:arm64 libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libsz2:arm64 libtasn1-6:arm64 libtool libtsan0:arm64 libtsan0-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libunistring2:arm64 libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db meson mime-support ninja-build perl perl-modules-5.30 pkg-config po-debconf procps python3 python3-minimal python3-pkg-resources python3.8 python3.8-minimal readline-common sbuild-build-depends-main-dummy:arm64 sensible-utils ucf zlib1g:arm64 zlib1g-dev:arm64 0 upgraded, 202 newly installed, 0 to remove and 0 not upgraded. Need to get 148 MB of archives. After this operation, 700 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1000 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.36-3+b1 [140 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-5 [920 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.3-2 [1314 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.30 all 5.30.3-4 [2806 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.30 amd64 5.30.3-4 [4019 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.30.3-4 [290 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1g-1 [1543 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.8-minimal amd64 3.8.6-1 [761 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.2.9-1 [94.3 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 python3.8-minimal amd64 3.8.6-1 [1863 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 python3-minimal amd64 3.8.2-3 [37.6 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 mime-support all 3.64 [37.8 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-4 [72.5 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-4 [160 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.33.0-1 [790 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.8-stdlib amd64 3.8.6-1 [1720 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 python3.8 amd64 3.8.6-1 [422 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3-stdlib amd64 3.8.2-3 [20.8 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 python3 amd64 3.8.2-3 [63.7 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-10-base arm64 10.2.0-9 [199 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-9-base arm64 9.3.0-18 [197 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.2+20200918-1 [102 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libprocps8 amd64 2:3.3.16-5 [62.7 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 procps amd64 2:3.3.16-5 [262 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-5 [262 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-5 [120 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-5 [67.9 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.2-4 [801 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-aarch64-linux-gnu amd64 2.35.1-1 [2804 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.17-1 [104 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.31-3 [2395 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev amd64 10.2.0-9 [1737 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10 amd64 10.2.0-9 [8664 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:10.2.0-1 [1644 B] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.5 [1473 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.5 [1909 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 cmake-data all 3.18.2-1 [1725 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-4 [8624 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-6 [692 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive13 amd64 3.4.3-2 [342 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libbrotli1 amd64 1.0.9-2 [287 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5support0 amd64 1.17-10 [64.6 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libk5crypto3 amd64 1.17-10 [115 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libkeyutils1 amd64 1.6.1-2 [15.4 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5-3 amd64 1.17-10 [366 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.17-10 [156 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2 [69.0 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2 [106 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-2.4-2 amd64 2.4.53+dfsg-1 [231 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libnghttp2-14 amd64 1.41.0-3 [74.0 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libpsl5 amd64 0.21.0-1.1 [55.3 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libssh2-1 amd64 1.8.0-2.1 [140 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libcurl4 amd64 7.72.0-1 [336 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3.1 [77.6 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 librhash0 amd64 1.4.0-1 [124 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libuv1 amd64 1.39.0-1 [131 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 cmake amd64 3.18.2-1 [5596 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-aarch64-linux-gnu-base amd64 10.2.0-9cross1 [199 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-10-aarch64-linux-gnu amd64 10.2.0-9cross1 [7820 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-aarch64-linux-gnu amd64 4:10.2.0-1 [16.8 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3.1 [39.9 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10.2.0-9cross1 [195 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-arm64-cross all 2.31-1cross2 [1260 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-arm64-cross all 10.2.0-9cross1 [34.5 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-arm64-cross all 10.2.0-9cross1 [89.6 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-arm64-cross all 10.2.0-9cross1 [23.3 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-arm64-cross all 10.2.0-9cross1 [9240 B] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-arm64-cross all 10.2.0-9cross1 [298 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0-arm64-cross all 10.2.0-9cross1 [125 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0-arm64-cross all 10.2.0-9cross1 [285 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-arm64-cross all 10.2.0-9cross1 [411 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-arm64-cross all 10.2.0-9cross1 [122 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-10-dev-arm64-cross all 10.2.0-9cross1 [880 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-aarch64-linux-gnu amd64 10.2.0-9cross1 [15.6 MB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-aarch64-linux-gnu amd64 4:10.2.0-1 [1456 B] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-arm64-cross all 5.7.6-1cross2 [1208 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-arm64-cross all 2.31-1cross2 [2067 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev-arm64-cross all 10.2.0-9cross1 [1678 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10-aarch64-linux-gnu amd64 10.2.0-9cross1 [8478 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 g++-aarch64-linux-gnu amd64 4:10.2.0-1 [1176 B] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3.1 [38.9 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3.1 [49.9 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-arm64 all 12.8 [6644 B] Get:109 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.2.1 [188 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.9.0-1 [15.2 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.181-1 [164 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.66.0-2 [1361 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.2.1 [1007 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main amd64 googletest all 1.10.0-3 [626 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main arm64 hdf5-helpers arm64 1.10.6+repack-2 [40.0 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc-s1 arm64 10.2.0-9 [34.6 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main arm64 libcrypt1 arm64 1:4.4.17-1 [89.3 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main arm64 libc6 arm64 2.31-3 [2491 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main arm64 libaec0 arm64 1.0.4-1 [19.8 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main arm64 libsz2 arm64 1.0.4-1 [6736 B] Get:131 http://debian.oregonstate.edu/debian unstable/main arm64 libaec-dev arm64 1.0.4-1 [18.2 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main arm64 libasan5 arm64 9.3.0-18 [354 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main arm64 libatomic1 arm64 10.2.0-9 [9444 B] Get:134 http://debian.oregonstate.edu/debian unstable/main arm64 libgomp1 arm64 10.2.0-9 [91.6 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main arm64 libitm1 arm64 10.2.0-9 [23.8 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main arm64 liblsan0 arm64 10.2.0-9 [126 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main arm64 libtsan0 arm64 10.2.0-9 [293 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++6 arm64 10.2.0-9 [450 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main arm64 libubsan1 arm64 10.2.0-9 [123 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc-9-dev arm64 9.3.0-18 [884 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main arm64 linux-libc-dev arm64 5.8.10-1 [1161 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main arm64 libcrypt-dev arm64 1:4.4.17-1 [109 kB] Get:143 http://debian.oregonstate.edu/debian unstable/main arm64 libc6-dev arm64 2.31-3 [2079 kB] Get:144 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++-9-dev arm64 9.3.0-18 [1661 kB] Get:145 http://debian.oregonstate.edu/debian unstable/main arm64 libboost1.71-dev arm64 1.71.0-6+b2 [9097 kB] Get:146 http://debian.oregonstate.edu/debian unstable/main arm64 libboost-dev arm64 1.71.0.3 [4340 B] Get:147 http://debian.oregonstate.edu/debian unstable/main arm64 libbrotli1 arm64 1.0.9-2 [280 kB] Get:148 http://debian.oregonstate.edu/debian unstable/main arm64 libbz2-1.0 arm64 1.0.8-4 [46.5 kB] Get:149 http://debian.oregonstate.edu/debian unstable/main arm64 libcom-err2 arm64 1.45.6-1 [71.6 kB] Get:150 http://debian.oregonstate.edu/debian unstable/main arm64 libgmp10 arm64 2:6.2.0+dfsg-6 [230 kB] Get:151 http://debian.oregonstate.edu/debian unstable/main arm64 libnettle8 arm64 3.6-2 [248 kB] Get:152 http://debian.oregonstate.edu/debian unstable/main arm64 libhogweed6 arm64 3.6-2 [310 kB] Get:153 http://debian.oregonstate.edu/debian unstable/main arm64 libunistring2 arm64 0.9.10-4 [372 kB] Get:154 http://debian.oregonstate.edu/debian unstable/main arm64 libidn2-0 arm64 2.3.0-1 [84.8 kB] Get:155 http://debian.oregonstate.edu/debian unstable/main arm64 libffi7 arm64 3.3-4 [20.5 kB] Get:156 http://debian.oregonstate.edu/debian unstable/main arm64 libp11-kit0 arm64 0.23.21-2 [325 kB] Get:157 http://debian.oregonstate.edu/debian unstable/main arm64 libtasn1-6 arm64 4.16.0-2 [53.5 kB] Get:158 http://debian.oregonstate.edu/debian unstable/main arm64 libgnutls30 arm64 3.6.15-4 [1117 kB] Get:159 http://debian.oregonstate.edu/debian unstable/main arm64 libkrb5support0 arm64 1.17-10 [64.1 kB] Get:160 http://debian.oregonstate.edu/debian unstable/main arm64 libk5crypto3 arm64 1.17-10 [116 kB] Get:161 http://debian.oregonstate.edu/debian unstable/main arm64 libkeyutils1 arm64 1.6.1-2 [15.4 kB] Get:162 http://debian.oregonstate.edu/debian unstable/main arm64 libssl1.1 arm64 1.1.1g-1 [1379 kB] Get:163 http://debian.oregonstate.edu/debian unstable/main arm64 libkrb5-3 arm64 1.17-10 [349 kB] Get:164 http://debian.oregonstate.edu/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.17-10 [149 kB] Get:165 http://debian.oregonstate.edu/debian unstable/main arm64 libdb5.3 arm64 5.3.28+dfsg1-0.6 [622 kB] Get:166 http://debian.oregonstate.edu/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-2 [69.2 kB] Get:167 http://debian.oregonstate.edu/debian unstable/main arm64 libsasl2-2 arm64 2.1.27+dfsg-2 [105 kB] Get:168 http://debian.oregonstate.edu/debian unstable/main arm64 libldap-2.4-2 arm64 2.4.53+dfsg-1 [221 kB] Get:169 http://debian.oregonstate.edu/debian unstable/main arm64 libnghttp2-14 arm64 1.41.0-3 [70.9 kB] Get:170 http://debian.oregonstate.edu/debian unstable/main arm64 libpsl5 arm64 0.21.0-1.1 [55.1 kB] Get:171 http://debian.oregonstate.edu/debian unstable/main arm64 zlib1g arm64 1:1.2.11.dfsg-2 [87.9 kB] Get:172 http://debian.oregonstate.edu/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b2 [59.4 kB] Get:173 http://debian.oregonstate.edu/debian unstable/main arm64 libgpg-error0 arm64 1.38-2 [74.6 kB] Get:174 http://debian.oregonstate.edu/debian unstable/main arm64 libgcrypt20 arm64 1.8.6-2 [490 kB] Get:175 http://debian.oregonstate.edu/debian unstable/main arm64 libssh2-1 arm64 1.8.0-2.1 [135 kB] Get:176 http://debian.oregonstate.edu/debian unstable/main arm64 libcurl3-gnutls arm64 7.72.0-1 [313 kB] Get:177 http://debian.oregonstate.edu/debian unstable/main arm64 libdeflate0 arm64 1.6-1 [51.5 kB] Get:178 http://debian.oregonstate.edu/debian unstable/main arm64 libgfortran5 arm64 10.2.0-9 [333 kB] Get:179 http://debian.oregonstate.edu/debian unstable/main arm64 libgtest-dev arm64 1.10.0-3 [219 kB] Get:180 http://debian.oregonstate.edu/debian unstable/main arm64 libhdf5-103-1 arm64 1.10.6+repack-2 [1029 kB] Get:181 http://debian.oregonstate.edu/debian unstable/main arm64 libhdf5-cpp-103-1 arm64 1.10.6+repack-2 [134 kB] Get:182 http://debian.oregonstate.edu/debian unstable/main arm64 libhdf5-fortran-102 arm64 1.10.6+repack-2 [101 kB] Get:183 http://debian.oregonstate.edu/debian unstable/main arm64 libhdf5-hl-100 arm64 1.10.6+repack-2 [78.3 kB] Get:184 http://debian.oregonstate.edu/debian unstable/main arm64 libhdf5-hl-fortran-100 arm64 1.10.6+repack-2 [53.7 kB] Get:185 http://debian.oregonstate.edu/debian unstable/main arm64 libhdf5-hl-cpp-100 arm64 1.10.6+repack-2 [37.2 kB] Get:186 http://debian.oregonstate.edu/debian unstable/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-2 [189 kB] Get:187 http://debian.oregonstate.edu/debian unstable/main arm64 libjpeg62-turbo arm64 1:2.0.5-1.1 [132 kB] Get:188 http://debian.oregonstate.edu/debian unstable/main arm64 libjpeg62-turbo-dev arm64 1:2.0.5-1.1 [253 kB] Get:189 http://debian.oregonstate.edu/debian unstable/main arm64 libhdf5-dev arm64 1.10.6+repack-2 [2543 kB] Get:190 http://debian.oregonstate.edu/debian unstable/main arm64 liblzma5 arm64 5.2.4-1+b1 [149 kB] Get:191 http://debian.oregonstate.edu/debian unstable/main arm64 libhts3 arm64 1.10.2-5 [322 kB] Get:192 http://debian.oregonstate.edu/debian unstable/main arm64 liblzma-dev arm64 5.2.4-1+b1 [209 kB] Get:193 http://debian.oregonstate.edu/debian unstable/main arm64 libhts-dev arm64 1.10.2-5 [4730 kB] Get:194 http://debian.oregonstate.edu/debian unstable/main arm64 libpbcopper1.6.0 arm64 1.6.0+dfsg-4+b1 [317 kB] Get:195 http://debian.oregonstate.edu/debian unstable/main arm64 libpbbam1.3.0 arm64 1.3.0+dfsg-2 [612 kB] Get:196 http://debian.oregonstate.edu/debian unstable/main arm64 libssl-dev arm64 1.1.1g-1 [1685 kB] Get:197 http://debian.oregonstate.edu/debian unstable/main arm64 libpbbam-dev arm64 1.3.0+dfsg-2 [88.2 kB] Get:198 http://debian.oregonstate.edu/debian unstable/main arm64 libpbcopper-dev arm64 1.6.0+dfsg-4+b1 [573 kB] Get:199 http://debian.oregonstate.edu/debian unstable/main amd64 ninja-build amd64 1.10.1-1 [112 kB] Get:200 http://debian.oregonstate.edu/debian unstable/main amd64 python3-pkg-resources all 49.3.1-2 [188 kB] Get:201 http://debian.oregonstate.edu/debian unstable/main amd64 meson all 0.55.3-1 [416 kB] Get:202 http://debian.oregonstate.edu/debian unstable/main amd64 pkg-config amd64 0.29.2-1 [65.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 148 MB in 4s (41.3 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10451 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36-3+b1_amd64.deb ... Unpacking bsdextrautils (2.36-3+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../01-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-5_amd64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../03-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.3-2_amd64.deb ... Unpacking man-db (2.9.3-2) ... Selecting previously unselected package perl-modules-5.30. Preparing to unpack .../05-perl-modules-5.30_5.30.3-4_all.deb ... Unpacking perl-modules-5.30 (5.30.3-4) ... Selecting previously unselected package libperl5.30:amd64. Preparing to unpack .../06-libperl5.30_5.30.3-4_amd64.deb ... Unpacking libperl5.30:amd64 (5.30.3-4) ... Selecting previously unselected package perl. Preparing to unpack .../07-perl_5.30.3-4_amd64.deb ... Unpacking perl (5.30.3-4) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../08-liblocale-gettext-perl_1.07-4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../09-libssl1.1_1.1.1g-1_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1g-1) ... Selecting previously unselected package libpython3.8-minimal:amd64. Preparing to unpack .../10-libpython3.8-minimal_3.8.6-1_amd64.deb ... Unpacking libpython3.8-minimal:amd64 (3.8.6-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../11-libexpat1_2.2.9-1_amd64.deb ... Unpacking libexpat1:amd64 (2.2.9-1) ... Selecting previously unselected package python3.8-minimal. Preparing to unpack .../12-python3.8-minimal_3.8.6-1_amd64.deb ... Unpacking python3.8-minimal (3.8.6-1) ... Setting up libssl1.1:amd64 (1.1.1g-1) ... Setting up libpython3.8-minimal:amd64 (3.8.6-1) ... Setting up libexpat1:amd64 (2.2.9-1) ... Setting up python3.8-minimal (3.8.6-1) ... Selecting previously unselected package python3-minimal. (Reading database ... 13255 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.8.2-3_amd64.deb ... Unpacking python3-minimal (3.8.2-3) ... Selecting previously unselected package mime-support. Preparing to unpack .../1-mime-support_3.64_all.deb ... Unpacking mime-support (3.64) ... Selecting previously unselected package readline-common. Preparing to unpack .../2-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../3-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../4-libsqlite3-0_3.33.0-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.33.0-1) ... Selecting previously unselected package libpython3.8-stdlib:amd64. Preparing to unpack .../5-libpython3.8-stdlib_3.8.6-1_amd64.deb ... Unpacking libpython3.8-stdlib:amd64 (3.8.6-1) ... Selecting previously unselected package python3.8. Preparing to unpack .../6-python3.8_3.8.6-1_amd64.deb ... Unpacking python3.8 (3.8.6-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../7-libpython3-stdlib_3.8.2-3_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.8.2-3) ... Setting up python3-minimal (3.8.2-3) ... Selecting previously unselected package python3. (Reading database ... 13683 files and directories currently installed.) Preparing to unpack .../000-python3_3.8.2-3_amd64.deb ... Unpacking python3 (3.8.2-3) ... Selecting previously unselected package gcc-10-base:arm64. Preparing to unpack .../001-gcc-10-base_10.2.0-9_arm64.deb ... Unpacking gcc-10-base:arm64 (10.2.0-9) ... Selecting previously unselected package gcc-9-base:arm64. Preparing to unpack .../002-gcc-9-base_9.3.0-18_arm64.deb ... Unpacking gcc-9-base:arm64 (9.3.0-18) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../003-libncurses6_6.2+20200918-1_amd64.deb ... Unpacking libncurses6:amd64 (6.2+20200918-1) ... Selecting previously unselected package libprocps8:amd64. Preparing to unpack .../004-libprocps8_2%3a3.3.16-5_amd64.deb ... Unpacking libprocps8:amd64 (2:3.3.16-5) ... Selecting previously unselected package procps. Preparing to unpack .../005-procps_2%3a3.3.16-5_amd64.deb ... Unpacking procps (2:3.3.16-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../006-sensible-utils_0.0.12+nmu1_all.deb ... Unpacking sensible-utils (0.0.12+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../007-libmagic-mgc_1%3a5.38-5_amd64.deb ... Unpacking libmagic-mgc (1:5.38-5) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../008-libmagic1_1%3a5.38-5_amd64.deb ... Unpacking libmagic1:amd64 (1:5.38-5) ... Selecting previously unselected package file. Preparing to unpack .../009-file_1%3a5.38-5_amd64.deb ... Unpacking file (1:5.38-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../010-gettext-base_0.19.8.1-10_amd64.deb ... Unpacking gettext-base (0.19.8.1-10) ... Selecting previously unselected package ucf. Preparing to unpack .../011-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../012-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../013-m4_1.4.18-4_amd64.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../014-autoconf_2.69-11.1_all.deb ... Unpacking autoconf (2.69-11.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../015-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../016-automake_1%3a1.16.2-4_all.deb ... Unpacking automake (1:1.16.2-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../017-autopoint_0.19.8.1-10_all.deb ... Unpacking autopoint (0.19.8.1-10) ... Selecting previously unselected package binutils-aarch64-linux-gnu. Preparing to unpack .../018-binutils-aarch64-linux-gnu_2.35.1-1_amd64.deb ... Unpacking binutils-aarch64-linux-gnu (2.35.1-1) ... Selecting previously unselected package libcrypt-dev:amd64. Preparing to unpack .../019-libcrypt-dev_1%3a4.4.17-1_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.17-1) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../020-libc6-dev_2.31-3_amd64.deb ... Unpacking libc6-dev:amd64 (2.31-3) ... Selecting previously unselected package libstdc++-10-dev:amd64. Preparing to unpack .../021-libstdc++-10-dev_10.2.0-9_amd64.deb ... Unpacking libstdc++-10-dev:amd64 (10.2.0-9) ... Selecting previously unselected package g++-10. Preparing to unpack .../022-g++-10_10.2.0-9_amd64.deb ... Unpacking g++-10 (10.2.0-9) ... Selecting previously unselected package g++. Preparing to unpack .../023-g++_4%3a10.2.0-1_amd64.deb ... Unpacking g++ (4:10.2.0-1) ... Selecting previously unselected package libdpkg-perl. Preparing to unpack .../024-libdpkg-perl_1.20.5_all.deb ... Unpacking libdpkg-perl (1.20.5) ... Selecting previously unselected package dpkg-dev. Preparing to unpack .../025-dpkg-dev_1.20.5_all.deb ... Unpacking dpkg-dev (1.20.5) ... Selecting previously unselected package build-essential. Preparing to unpack .../026-build-essential_12.8_amd64.deb ... Unpacking build-essential (12.8) ... Selecting previously unselected package cmake-data. Preparing to unpack .../027-cmake-data_3.18.2-1_all.deb ... Unpacking cmake-data (3.18.2-1) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../028-libicu67_67.1-4_amd64.deb ... Unpacking libicu67:amd64 (67.1-4) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../029-libxml2_2.9.10+dfsg-6_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-6) ... Selecting previously unselected package libarchive13:amd64. Preparing to unpack .../030-libarchive13_3.4.3-2_amd64.deb ... Unpacking libarchive13:amd64 (3.4.3-2) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../031-libbrotli1_1.0.9-2_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.9-2) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../032-libkrb5support0_1.17-10_amd64.deb ... Unpacking libkrb5support0:amd64 (1.17-10) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../033-libk5crypto3_1.17-10_amd64.deb ... Unpacking libk5crypto3:amd64 (1.17-10) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../034-libkeyutils1_1.6.1-2_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.1-2) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../035-libkrb5-3_1.17-10_amd64.deb ... Unpacking libkrb5-3:amd64 (1.17-10) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../036-libgssapi-krb5-2_1.17-10_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.17-10) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../037-libsasl2-modules-db_2.1.27+dfsg-2_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.27+dfsg-2) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../038-libsasl2-2_2.1.27+dfsg-2_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.27+dfsg-2) ... Selecting previously unselected package libldap-2.4-2:amd64. Preparing to unpack .../039-libldap-2.4-2_2.4.53+dfsg-1_amd64.deb ... Unpacking libldap-2.4-2:amd64 (2.4.53+dfsg-1) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../040-libnghttp2-14_1.41.0-3_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.41.0-3) ... Selecting previously unselected package libpsl5:amd64. Preparing to unpack .../041-libpsl5_0.21.0-1.1_amd64.deb ... Unpacking libpsl5:amd64 (0.21.0-1.1) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../042-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:amd64. Preparing to unpack .../043-libssh2-1_1.8.0-2.1_amd64.deb ... Unpacking libssh2-1:amd64 (1.8.0-2.1) ... Selecting previously unselected package libcurl4:amd64. Preparing to unpack .../044-libcurl4_7.72.0-1_amd64.deb ... Unpacking libcurl4:amd64 (7.72.0-1) ... Selecting previously unselected package libjsoncpp1:amd64. Preparing to unpack .../045-libjsoncpp1_1.7.4-3.1_amd64.deb ... Unpacking libjsoncpp1:amd64 (1.7.4-3.1) ... Selecting previously unselected package librhash0:amd64. Preparing to unpack .../046-librhash0_1.4.0-1_amd64.deb ... Unpacking librhash0:amd64 (1.4.0-1) ... Selecting previously unselected package libuv1:amd64. Preparing to unpack .../047-libuv1_1.39.0-1_amd64.deb ... Unpacking libuv1:amd64 (1.39.0-1) ... Selecting previously unselected package cmake. Preparing to unpack .../048-cmake_3.18.2-1_amd64.deb ... Unpacking cmake (3.18.2-1) ... Selecting previously unselected package gcc-10-aarch64-linux-gnu-base:amd64. Preparing to unpack .../049-gcc-10-aarch64-linux-gnu-base_10.2.0-9cross1_amd64.deb ... Unpacking gcc-10-aarch64-linux-gnu-base:amd64 (10.2.0-9cross1) ... Selecting previously unselected package cpp-10-aarch64-linux-gnu. Preparing to unpack .../050-cpp-10-aarch64-linux-gnu_10.2.0-9cross1_amd64.deb ... Unpacking cpp-10-aarch64-linux-gnu (10.2.0-9cross1) ... Selecting previously unselected package cpp-aarch64-linux-gnu. Preparing to unpack .../051-cpp-aarch64-linux-gnu_4%3a10.2.0-1_amd64.deb ... Unpacking cpp-aarch64-linux-gnu (4:10.2.0-1) ... Selecting previously unselected package cross-config. Preparing to unpack .../052-cross-config_2.6.15-3.1_all.deb ... Unpacking cross-config (2.6.15-3.1) ... Selecting previously unselected package gcc-10-cross-base. Preparing to unpack .../053-gcc-10-cross-base_10.2.0-9cross1_all.deb ... Unpacking gcc-10-cross-base (10.2.0-9cross1) ... Selecting previously unselected package libc6-arm64-cross. Preparing to unpack .../054-libc6-arm64-cross_2.31-1cross2_all.deb ... Unpacking libc6-arm64-cross (2.31-1cross2) ... Selecting previously unselected package libgcc-s1-arm64-cross. Preparing to unpack .../055-libgcc-s1-arm64-cross_10.2.0-9cross1_all.deb ... Unpacking libgcc-s1-arm64-cross (10.2.0-9cross1) ... Selecting previously unselected package libgomp1-arm64-cross. Preparing to unpack .../056-libgomp1-arm64-cross_10.2.0-9cross1_all.deb ... Unpacking libgomp1-arm64-cross (10.2.0-9cross1) ... Selecting previously unselected package libitm1-arm64-cross. Preparing to unpack .../057-libitm1-arm64-cross_10.2.0-9cross1_all.deb ... Unpacking libitm1-arm64-cross (10.2.0-9cross1) ... Selecting previously unselected package libatomic1-arm64-cross. Preparing to unpack .../058-libatomic1-arm64-cross_10.2.0-9cross1_all.deb ... Unpacking libatomic1-arm64-cross (10.2.0-9cross1) ... Selecting previously unselected package libasan6-arm64-cross. Preparing to unpack .../059-libasan6-arm64-cross_10.2.0-9cross1_all.deb ... Unpacking libasan6-arm64-cross (10.2.0-9cross1) ... Selecting previously unselected package liblsan0-arm64-cross. Preparing to unpack .../060-liblsan0-arm64-cross_10.2.0-9cross1_all.deb ... Unpacking liblsan0-arm64-cross (10.2.0-9cross1) ... Selecting previously unselected package libtsan0-arm64-cross. Preparing to unpack .../061-libtsan0-arm64-cross_10.2.0-9cross1_all.deb ... Unpacking libtsan0-arm64-cross (10.2.0-9cross1) ... Selecting previously unselected package libstdc++6-arm64-cross. Preparing to unpack .../062-libstdc++6-arm64-cross_10.2.0-9cross1_all.deb ... Unpacking libstdc++6-arm64-cross (10.2.0-9cross1) ... Selecting previously unselected package libubsan1-arm64-cross. Preparing to unpack .../063-libubsan1-arm64-cross_10.2.0-9cross1_all.deb ... Unpacking libubsan1-arm64-cross (10.2.0-9cross1) ... Selecting previously unselected package libgcc-10-dev-arm64-cross. Preparing to unpack .../064-libgcc-10-dev-arm64-cross_10.2.0-9cross1_all.deb ... Unpacking libgcc-10-dev-arm64-cross (10.2.0-9cross1) ... Selecting previously unselected package gcc-10-aarch64-linux-gnu. Preparing to unpack .../065-gcc-10-aarch64-linux-gnu_10.2.0-9cross1_amd64.deb ... Unpacking gcc-10-aarch64-linux-gnu (10.2.0-9cross1) ... Selecting previously unselected package gcc-aarch64-linux-gnu. Preparing to unpack .../066-gcc-aarch64-linux-gnu_4%3a10.2.0-1_amd64.deb ... Unpacking gcc-aarch64-linux-gnu (4:10.2.0-1) ... Selecting previously unselected package linux-libc-dev-arm64-cross. Preparing to unpack .../067-linux-libc-dev-arm64-cross_5.7.6-1cross2_all.deb ... Unpacking linux-libc-dev-arm64-cross (5.7.6-1cross2) ... Selecting previously unselected package libc6-dev-arm64-cross. Preparing to unpack .../068-libc6-dev-arm64-cross_2.31-1cross2_all.deb ... Unpacking libc6-dev-arm64-cross (2.31-1cross2) ... Selecting previously unselected package libstdc++-10-dev-arm64-cross. Preparing to unpack .../069-libstdc++-10-dev-arm64-cross_10.2.0-9cross1_all.deb ... Unpacking libstdc++-10-dev-arm64-cross (10.2.0-9cross1) ... Selecting previously unselected package g++-10-aarch64-linux-gnu. Preparing to unpack .../070-g++-10-aarch64-linux-gnu_10.2.0-9cross1_amd64.deb ... Unpacking g++-10-aarch64-linux-gnu (10.2.0-9cross1) ... Selecting previously unselected package g++-aarch64-linux-gnu. Preparing to unpack .../071-g++-aarch64-linux-gnu_4%3a10.2.0-1_amd64.deb ... Unpacking g++-aarch64-linux-gnu (4:10.2.0-1) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../072-libconfig-inifiles-perl_3.000003-1_all.deb ... Unpacking libconfig-inifiles-perl (3.000003-1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../073-libio-string-perl_1.08-3_all.deb ... Unpacking libio-string-perl (1.08-3) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../074-libxml-namespacesupport-perl_1.12-1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../075-libxml-sax-base-perl_1.09-1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../076-libxml-sax-perl_1.02+dfsg-1_all.deb ... Unpacking libxml-sax-perl (1.02+dfsg-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../077-libxml-libxml-perl_2.0134+dfsg-2_amd64.deb ... Unpacking libxml-libxml-perl (2.0134+dfsg-2) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../078-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../079-libyaml-perl_1.30-1_all.deb ... Unpacking libyaml-perl (1.30-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../080-libconfig-auto-perl_0.44-1_all.deb ... Unpacking libconfig-auto-perl (0.44-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../081-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../082-libfile-homedir-perl_1.004-1_all.deb ... Unpacking libfile-homedir-perl (1.004-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../083-libdebian-dpkgcross-perl_2.6.15-3.1_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-3.1) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../084-dpkg-cross_2.6.15-3.1_all.deb ... Unpacking dpkg-cross (2.6.15-3.1) ... Selecting previously unselected package crossbuild-essential-arm64. Preparing to unpack .../085-crossbuild-essential-arm64_12.8_all.deb ... Unpacking crossbuild-essential-arm64 (12.8) ... Selecting previously unselected package libtool. Preparing to unpack .../086-libtool_2.4.6-14_all.deb ... Unpacking libtool (2.4.6-14) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../087-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../088-libdebhelper-perl_13.2.1_all.deb ... Unpacking libdebhelper-perl (13.2.1) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../089-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../090-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../091-libfile-stripnondeterminism-perl_1.9.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.9.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../092-dh-strip-nondeterminism_1.9.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.9.0-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../093-libelf1_0.181-1_amd64.deb ... Unpacking libelf1:amd64 (0.181-1) ... Selecting previously unselected package dwz. Preparing to unpack .../094-dwz_0.13-5_amd64.deb ... Unpacking dwz (0.13-5) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../095-libglib2.0-0_2.66.0-2_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.66.0-2) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../096-libcroco3_0.6.13-1_amd64.deb ... Unpacking libcroco3:amd64 (0.6.13-1) ... Selecting previously unselected package gettext. Preparing to unpack .../097-gettext_0.19.8.1-10_amd64.deb ... Unpacking gettext (0.19.8.1-10) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../098-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../099-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../100-debhelper_13.2.1_all.deb ... Unpacking debhelper (13.2.1) ... Selecting previously unselected package googletest. Preparing to unpack .../101-googletest_1.10.0-3_all.deb ... Unpacking googletest (1.10.0-3) ... Selecting previously unselected package hdf5-helpers:arm64. Preparing to unpack .../102-hdf5-helpers_1.10.6+repack-2_arm64.deb ... Unpacking hdf5-helpers:arm64 (1.10.6+repack-2) ... Selecting previously unselected package libgcc-s1:arm64. Preparing to unpack .../103-libgcc-s1_10.2.0-9_arm64.deb ... Unpacking libgcc-s1:arm64 (10.2.0-9) ... Selecting previously unselected package libcrypt1:arm64. Preparing to unpack .../104-libcrypt1_1%3a4.4.17-1_arm64.deb ... Unpacking libcrypt1:arm64 (1:4.4.17-1) ... Selecting previously unselected package libc6:arm64. Preparing to unpack .../105-libc6_2.31-3_arm64.deb ... Unpacking libc6:arm64 (2.31-3) ... Selecting previously unselected package libaec0:arm64. Preparing to unpack .../106-libaec0_1.0.4-1_arm64.deb ... Unpacking libaec0:arm64 (1.0.4-1) ... Selecting previously unselected package libsz2:arm64. Preparing to unpack .../107-libsz2_1.0.4-1_arm64.deb ... Unpacking libsz2:arm64 (1.0.4-1) ... Selecting previously unselected package libaec-dev:arm64. Preparing to unpack .../108-libaec-dev_1.0.4-1_arm64.deb ... Unpacking libaec-dev:arm64 (1.0.4-1) ... Selecting previously unselected package libasan5:arm64. Preparing to unpack .../109-libasan5_9.3.0-18_arm64.deb ... Unpacking libasan5:arm64 (9.3.0-18) ... Selecting previously unselected package libatomic1:arm64. Preparing to unpack .../110-libatomic1_10.2.0-9_arm64.deb ... Unpacking libatomic1:arm64 (10.2.0-9) ... Selecting previously unselected package libgomp1:arm64. Preparing to unpack .../111-libgomp1_10.2.0-9_arm64.deb ... Unpacking libgomp1:arm64 (10.2.0-9) ... Selecting previously unselected package libitm1:arm64. Preparing to unpack .../112-libitm1_10.2.0-9_arm64.deb ... Unpacking libitm1:arm64 (10.2.0-9) ... Selecting previously unselected package liblsan0:arm64. Preparing to unpack .../113-liblsan0_10.2.0-9_arm64.deb ... Unpacking liblsan0:arm64 (10.2.0-9) ... Selecting previously unselected package libtsan0:arm64. Preparing to unpack .../114-libtsan0_10.2.0-9_arm64.deb ... Unpacking libtsan0:arm64 (10.2.0-9) ... Selecting previously unselected package libstdc++6:arm64. Preparing to unpack .../115-libstdc++6_10.2.0-9_arm64.deb ... Unpacking libstdc++6:arm64 (10.2.0-9) ... Selecting previously unselected package libubsan1:arm64. Preparing to unpack .../116-libubsan1_10.2.0-9_arm64.deb ... Unpacking libubsan1:arm64 (10.2.0-9) ... Selecting previously unselected package libgcc-9-dev:arm64. Preparing to unpack .../117-libgcc-9-dev_9.3.0-18_arm64.deb ... Unpacking libgcc-9-dev:arm64 (9.3.0-18) ... Selecting previously unselected package linux-libc-dev:arm64. Preparing to unpack .../118-linux-libc-dev_5.8.10-1_arm64.deb ... Unpacking linux-libc-dev:arm64 (5.8.10-1) ... Selecting previously unselected package libcrypt-dev:arm64. Preparing to unpack .../119-libcrypt-dev_1%3a4.4.17-1_arm64.deb ... Unpacking libcrypt-dev:arm64 (1:4.4.17-1) ... Selecting previously unselected package libc6-dev:arm64. Preparing to unpack .../120-libc6-dev_2.31-3_arm64.deb ... Unpacking libc6-dev:arm64 (2.31-3) ... Selecting previously unselected package libstdc++-9-dev:arm64. Preparing to unpack .../121-libstdc++-9-dev_9.3.0-18_arm64.deb ... Unpacking libstdc++-9-dev:arm64 (9.3.0-18) ... Selecting previously unselected package libboost1.71-dev:arm64. Preparing to unpack .../122-libboost1.71-dev_1.71.0-6+b2_arm64.deb ... Unpacking libboost1.71-dev:arm64 (1.71.0-6+b2) ... Selecting previously unselected package libboost-dev:arm64. Preparing to unpack .../123-libboost-dev_1.71.0.3_arm64.deb ... Unpacking libboost-dev:arm64 (1.71.0.3) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../124-libbrotli1_1.0.9-2_arm64.deb ... Unpacking libbrotli1:arm64 (1.0.9-2) ... Selecting previously unselected package libbz2-1.0:arm64. Preparing to unpack .../125-libbz2-1.0_1.0.8-4_arm64.deb ... Unpacking libbz2-1.0:arm64 (1.0.8-4) ... Selecting previously unselected package libcom-err2:arm64. Preparing to unpack .../126-libcom-err2_1.45.6-1_arm64.deb ... Unpacking libcom-err2:arm64 (1.45.6-1) ... Selecting previously unselected package libgmp10:arm64. Preparing to unpack .../127-libgmp10_2%3a6.2.0+dfsg-6_arm64.deb ... Unpacking libgmp10:arm64 (2:6.2.0+dfsg-6) ... Selecting previously unselected package libnettle8:arm64. Preparing to unpack .../128-libnettle8_3.6-2_arm64.deb ... Unpacking libnettle8:arm64 (3.6-2) ... Selecting previously unselected package libhogweed6:arm64. Preparing to unpack .../129-libhogweed6_3.6-2_arm64.deb ... Unpacking libhogweed6:arm64 (3.6-2) ... Selecting previously unselected package libunistring2:arm64. Preparing to unpack .../130-libunistring2_0.9.10-4_arm64.deb ... Unpacking libunistring2:arm64 (0.9.10-4) ... Selecting previously unselected package libidn2-0:arm64. Preparing to unpack .../131-libidn2-0_2.3.0-1_arm64.deb ... Unpacking libidn2-0:arm64 (2.3.0-1) ... Selecting previously unselected package libffi7:arm64. Preparing to unpack .../132-libffi7_3.3-4_arm64.deb ... Unpacking libffi7:arm64 (3.3-4) ... Selecting previously unselected package libp11-kit0:arm64. Preparing to unpack .../133-libp11-kit0_0.23.21-2_arm64.deb ... Unpacking libp11-kit0:arm64 (0.23.21-2) ... Selecting previously unselected package libtasn1-6:arm64. Preparing to unpack .../134-libtasn1-6_4.16.0-2_arm64.deb ... Unpacking libtasn1-6:arm64 (4.16.0-2) ... Selecting previously unselected package libgnutls30:arm64. Preparing to unpack .../135-libgnutls30_3.6.15-4_arm64.deb ... Unpacking libgnutls30:arm64 (3.6.15-4) ... Selecting previously unselected package libkrb5support0:arm64. Preparing to unpack .../136-libkrb5support0_1.17-10_arm64.deb ... Unpacking libkrb5support0:arm64 (1.17-10) ... Selecting previously unselected package libk5crypto3:arm64. Preparing to unpack .../137-libk5crypto3_1.17-10_arm64.deb ... Unpacking libk5crypto3:arm64 (1.17-10) ... Selecting previously unselected package libkeyutils1:arm64. Preparing to unpack .../138-libkeyutils1_1.6.1-2_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6.1-2) ... Selecting previously unselected package libssl1.1:arm64. Preparing to unpack .../139-libssl1.1_1.1.1g-1_arm64.deb ... Unpacking libssl1.1:arm64 (1.1.1g-1) ... Selecting previously unselected package libkrb5-3:arm64. Preparing to unpack .../140-libkrb5-3_1.17-10_arm64.deb ... Unpacking libkrb5-3:arm64 (1.17-10) ... Selecting previously unselected package libgssapi-krb5-2:arm64. Preparing to unpack .../141-libgssapi-krb5-2_1.17-10_arm64.deb ... Unpacking libgssapi-krb5-2:arm64 (1.17-10) ... Selecting previously unselected package libdb5.3:arm64. Preparing to unpack .../142-libdb5.3_5.3.28+dfsg1-0.6_arm64.deb ... Unpacking libdb5.3:arm64 (5.3.28+dfsg1-0.6) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../143-libsasl2-modules-db_2.1.27+dfsg-2_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.27+dfsg-2) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../144-libsasl2-2_2.1.27+dfsg-2_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.27+dfsg-2) ... Selecting previously unselected package libldap-2.4-2:arm64. Preparing to unpack .../145-libldap-2.4-2_2.4.53+dfsg-1_arm64.deb ... Unpacking libldap-2.4-2:arm64 (2.4.53+dfsg-1) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../146-libnghttp2-14_1.41.0-3_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.41.0-3) ... Selecting previously unselected package libpsl5:arm64. Preparing to unpack .../147-libpsl5_0.21.0-1.1_arm64.deb ... Unpacking libpsl5:arm64 (0.21.0-1.1) ... Selecting previously unselected package zlib1g:arm64. Preparing to unpack .../148-zlib1g_1%3a1.2.11.dfsg-2_arm64.deb ... Unpacking zlib1g:arm64 (1:1.2.11.dfsg-2) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../149-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libgpg-error0:arm64. Preparing to unpack .../150-libgpg-error0_1.38-2_arm64.deb ... Unpacking libgpg-error0:arm64 (1.38-2) ... Selecting previously unselected package libgcrypt20:arm64. Preparing to unpack .../151-libgcrypt20_1.8.6-2_arm64.deb ... Unpacking libgcrypt20:arm64 (1.8.6-2) ... Selecting previously unselected package libssh2-1:arm64. Preparing to unpack .../152-libssh2-1_1.8.0-2.1_arm64.deb ... Unpacking libssh2-1:arm64 (1.8.0-2.1) ... Selecting previously unselected package libcurl3-gnutls:arm64. Preparing to unpack .../153-libcurl3-gnutls_7.72.0-1_arm64.deb ... Unpacking libcurl3-gnutls:arm64 (7.72.0-1) ... Selecting previously unselected package libdeflate0:arm64. Preparing to unpack .../154-libdeflate0_1.6-1_arm64.deb ... Unpacking libdeflate0:arm64 (1.6-1) ... Selecting previously unselected package libgfortran5:arm64. Preparing to unpack .../155-libgfortran5_10.2.0-9_arm64.deb ... Unpacking libgfortran5:arm64 (10.2.0-9) ... Selecting previously unselected package libgtest-dev:arm64. Preparing to unpack .../156-libgtest-dev_1.10.0-3_arm64.deb ... Unpacking libgtest-dev:arm64 (1.10.0-3) ... Selecting previously unselected package libhdf5-103-1:arm64. Preparing to unpack .../157-libhdf5-103-1_1.10.6+repack-2_arm64.deb ... Unpacking libhdf5-103-1:arm64 (1.10.6+repack-2) ... Selecting previously unselected package libhdf5-cpp-103-1:arm64. Preparing to unpack .../158-libhdf5-cpp-103-1_1.10.6+repack-2_arm64.deb ... Unpacking libhdf5-cpp-103-1:arm64 (1.10.6+repack-2) ... Selecting previously unselected package libhdf5-fortran-102:arm64. Preparing to unpack .../159-libhdf5-fortran-102_1.10.6+repack-2_arm64.deb ... Unpacking libhdf5-fortran-102:arm64 (1.10.6+repack-2) ... Selecting previously unselected package libhdf5-hl-100:arm64. Preparing to unpack .../160-libhdf5-hl-100_1.10.6+repack-2_arm64.deb ... Unpacking libhdf5-hl-100:arm64 (1.10.6+repack-2) ... Selecting previously unselected package libhdf5-hl-fortran-100:arm64. Preparing to unpack .../161-libhdf5-hl-fortran-100_1.10.6+repack-2_arm64.deb ... Unpacking libhdf5-hl-fortran-100:arm64 (1.10.6+repack-2) ... Selecting previously unselected package libhdf5-hl-cpp-100:arm64. Preparing to unpack .../162-libhdf5-hl-cpp-100_1.10.6+repack-2_arm64.deb ... Unpacking libhdf5-hl-cpp-100:arm64 (1.10.6+repack-2) ... Selecting previously unselected package zlib1g-dev:arm64. Preparing to unpack .../163-zlib1g-dev_1%3a1.2.11.dfsg-2_arm64.deb ... Unpacking zlib1g-dev:arm64 (1:1.2.11.dfsg-2) ... Selecting previously unselected package libjpeg62-turbo:arm64. Preparing to unpack .../164-libjpeg62-turbo_1%3a2.0.5-1.1_arm64.deb ... Unpacking libjpeg62-turbo:arm64 (1:2.0.5-1.1) ... Selecting previously unselected package libjpeg62-turbo-dev:arm64. Preparing to unpack .../165-libjpeg62-turbo-dev_1%3a2.0.5-1.1_arm64.deb ... Unpacking libjpeg62-turbo-dev:arm64 (1:2.0.5-1.1) ... Selecting previously unselected package libhdf5-dev:arm64. Preparing to unpack .../166-libhdf5-dev_1.10.6+repack-2_arm64.deb ... Unpacking libhdf5-dev:arm64 (1.10.6+repack-2) ... Selecting previously unselected package liblzma5:arm64. Preparing to unpack .../167-liblzma5_5.2.4-1+b1_arm64.deb ... Unpacking liblzma5:arm64 (5.2.4-1+b1) ... Selecting previously unselected package libhts3:arm64. Preparing to unpack .../168-libhts3_1.10.2-5_arm64.deb ... Unpacking libhts3:arm64 (1.10.2-5) ... Selecting previously unselected package liblzma-dev:arm64. Preparing to unpack .../169-liblzma-dev_5.2.4-1+b1_arm64.deb ... Unpacking liblzma-dev:arm64 (5.2.4-1+b1) ... Selecting previously unselected package libhts-dev:arm64. Preparing to unpack .../170-libhts-dev_1.10.2-5_arm64.deb ... Unpacking libhts-dev:arm64 (1.10.2-5) ... Selecting previously unselected package libpbcopper1.6.0:arm64. Preparing to unpack .../171-libpbcopper1.6.0_1.6.0+dfsg-4+b1_arm64.deb ... Unpacking libpbcopper1.6.0:arm64 (1.6.0+dfsg-4+b1) ... Selecting previously unselected package libpbbam1.3.0:arm64. Preparing to unpack .../172-libpbbam1.3.0_1.3.0+dfsg-2_arm64.deb ... Unpacking libpbbam1.3.0:arm64 (1.3.0+dfsg-2) ... Selecting previously unselected package libssl-dev:arm64. Preparing to unpack .../173-libssl-dev_1.1.1g-1_arm64.deb ... Unpacking libssl-dev:arm64 (1.1.1g-1) ... Selecting previously unselected package libpbbam-dev:arm64. Preparing to unpack .../174-libpbbam-dev_1.3.0+dfsg-2_arm64.deb ... Unpacking libpbbam-dev:arm64 (1.3.0+dfsg-2) ... Selecting previously unselected package libpbcopper-dev:arm64. Preparing to unpack .../175-libpbcopper-dev_1.6.0+dfsg-4+b1_arm64.deb ... Unpacking libpbcopper-dev:arm64 (1.6.0+dfsg-4+b1) ... Selecting previously unselected package ninja-build. Preparing to unpack .../176-ninja-build_1.10.1-1_amd64.deb ... Unpacking ninja-build (1.10.1-1) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../177-python3-pkg-resources_49.3.1-2_all.deb ... Unpacking python3-pkg-resources (49.3.1-2) ... Selecting previously unselected package meson. Preparing to unpack .../178-meson_0.55.3-1_all.deb ... Unpacking meson (0.55.3-1) ... Selecting previously unselected package pkg-config. Preparing to unpack .../179-pkg-config_0.29.2-1_amd64.deb ... Unpacking pkg-config (0.29.2-1) ... Selecting previously unselected package sbuild-build-depends-main-dummy:arm64. Preparing to unpack .../180-sbuild-build-depends-main-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libpipeline1:amd64 (1.5.3-1) ... Setting up libkeyutils1:amd64 (1.6.1-2) ... Setting up libpsl5:amd64 (0.21.0-1.1) ... Setting up perl-modules-5.30 (5.30.3-4) ... Setting up mime-support (3.64) ... Setting up bsdextrautils (2.36-3+b1) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up hdf5-helpers:arm64 (1.10.6+repack-2) ... Setting up libicu67:amd64 (67.1-4) ... Setting up libmagic-mgc (1:5.38-5) ... Setting up libglib2.0-0:amd64 (2.66.0-2) ... No schema files found: doing nothing. Setting up libbrotli1:amd64 (1.0.9-2) ... Setting up libsqlite3-0:amd64 (3.33.0-1) ... Setting up libnghttp2-14:amd64 (1.41.0-3) ... Setting up libmagic1:amd64 (1:5.38-5) ... Setting up linux-libc-dev:arm64 (5.8.10-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up binutils-aarch64-linux-gnu (2.35.1-1) ... Setting up file (1:5.38-5) ... Setting up googletest (1.10.0-3) ... Setting up ninja-build (1.10.1-1) ... Setting up libkrb5support0:amd64 (1.17-10) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-2) ... Setting up gcc-10-base:arm64 (10.2.0-9) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3.1) ... Setting up libuv1:amd64 (1.39.0-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libncurses6:amd64 (6.2+20200918-1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libc6-arm64-cross (2.31-1cross2) ... Setting up autopoint (0.19.8.1-10) ... Setting up libk5crypto3:amd64 (1.17-10) ... Setting up gcc-10-cross-base (10.2.0-9cross1) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-2) ... Setting up linux-libc-dev-arm64-cross (5.7.6-1cross2) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up librhash0:amd64 (1.4.0-1) ... Setting up libcrypt-dev:amd64 (1:4.4.17-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libperl5.30:amd64 (5.30.3-4) ... Setting up libc6-dev:amd64 (2.31-3) ... Setting up libssh2-1:amd64 (1.8.0-2.1) ... Setting up cmake-data (3.18.2-1) ... Setting up libkrb5-3:amd64 (1.17-10) ... Setting up libelf1:amd64 (0.181-1) ... Setting up readline-common (8.0-4) ... Setting up libxml2:amd64 (2.9.10+dfsg-6) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up libprocps8:amd64 (2:3.3.16-5) ... Setting up libjsoncpp1:amd64 (1.7.4-3.1) ... Setting up gcc-9-base:arm64 (9.3.0-18) ... Setting up libgcc-s1-arm64-cross (10.2.0-9cross1) ... Setting up gcc-10-aarch64-linux-gnu-base:amd64 (10.2.0-9cross1) ... Setting up libatomic1-arm64-cross (10.2.0-9cross1) ... Setting up liblsan0-arm64-cross (10.2.0-9cross1) ... Setting up libgomp1-arm64-cross (10.2.0-9cross1) ... Setting up libstdc++-10-dev:amd64 (10.2.0-9) ... Setting up g++-10 (10.2.0-9) ... Setting up libgtest-dev:arm64 (1.10.0-3) ... Setting up libtool (2.4.6-14) ... Setting up libarchive13:amd64 (3.4.3-2) ... Setting up libasan6-arm64-cross (10.2.0-9cross1) ... Setting up libreadline8:amd64 (8.0-4) ... Setting up libtsan0-arm64-cross (10.2.0-9cross1) ... Setting up libldap-2.4-2:amd64 (2.4.53+dfsg-1) ... Setting up m4 (1.4.18-4) ... Setting up libc6-dev-arm64-cross (2.31-1cross2) ... Setting up libstdc++6-arm64-cross (10.2.0-9cross1) ... Setting up perl (5.30.3-4) ... Setting up libgssapi-krb5-2:amd64 (1.17-10) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up libitm1-arm64-cross (10.2.0-9cross1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.5) ... Setting up autoconf (2.69-11.1) ... Setting up g++ (4:10.2.0-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up procps (2:3.3.16-5) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode Setting up cpp-10-aarch64-linux-gnu (10.2.0-9cross1) ... Setting up libcurl4:amd64 (7.72.0-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libpython3.8-stdlib:amd64 (3.8.6-1) ... Setting up python3.8 (3.8.6-1) ... Setting up libpython3-stdlib:amd64 (3.8.2-3) ... Setting up automake (1:1.16.2-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up gettext (0.19.8.1-10) ... Setting up libubsan1-arm64-cross (10.2.0-9cross1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libgcc-10-dev-arm64-cross (10.2.0-9cross1) ... Setting up libdebhelper-perl (13.2.1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up python3 (3.8.2-3) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.20.5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cpp-aarch64-linux-gnu (4:10.2.0-1) ... Setting up pkg-config (0.29.2-1) ... Setting up cmake (3.18.2-1) ... Setting up build-essential (12.8) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up python3-pkg-resources (49.3.1-2) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up libstdc++-10-dev-arm64-cross (10.2.0-9cross1) ... Setting up gcc-10-aarch64-linux-gnu (10.2.0-9cross1) ... Setting up po-debconf (1.0.21) ... Setting up meson (0.55.3-1) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-10-aarch64-linux-gnu (10.2.0-9cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up gcc-aarch64-linux-gnu (4:10.2.0-1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-aarch64-linux-gnu (4:10.2.0-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3.1) ... Setting up dpkg-cross (2.6.15-3.1) ... Setting up crossbuild-essential-arm64 (12.8) ... Setting up libcrypt1:arm64 (1:4.4.17-1) ... Setting up libgcc-s1:arm64 (10.2.0-9) ... Setting up dh-autoreconf (19) ... Setting up libc6:arm64 (2.31-3) ... Setting up libcrypt-dev:arm64 (1:4.4.17-1) ... Setting up libtasn1-6:arm64 (4.16.0-2) ... Setting up libc6-dev:arm64 (2.31-3) ... Setting up libbz2-1.0:arm64 (1.0.8-4) ... Setting up libdb5.3:arm64 (5.3.28+dfsg1-0.6) ... Setting up libstdc++6:arm64 (10.2.0-9) ... Setting up liblsan0:arm64 (10.2.0-9) ... Setting up libitm1:arm64 (10.2.0-9) ... Setting up libtsan0:arm64 (10.2.0-9) ... Setting up libkeyutils1:arm64 (1.6.1-2) ... Setting up libpbcopper1.6.0:arm64 (1.6.0+dfsg-4+b1) ... Setting up liblzma5:arm64 (5.2.4-1+b1) ... Setting up libgpg-error0:arm64 (1.38-2) ... Setting up libssl1.1:arm64 (1.1.1g-1) ... Setting up libbrotli1:arm64 (1.0.9-2) ... Setting up libffi7:arm64 (3.3-4) ... Setting up libnghttp2-14:arm64 (1.41.0-3) ... Setting up libunistring2:arm64 (0.9.10-4) ... Setting up libdeflate0:arm64 (1.6-1) ... Setting up libgcrypt20:arm64 (1.8.6-2) ... Setting up debhelper (13.2.1) ... Setting up zlib1g:arm64 (1:1.2.11.dfsg-2) ... Setting up libidn2-0:arm64 (2.3.0-1) ... Setting up libcom-err2:arm64 (1.45.6-1) ... Setting up libgomp1:arm64 (10.2.0-9) ... Setting up libaec0:arm64 (1.0.4-1) ... Setting up libkrb5support0:arm64 (1.17-10) ... Setting up libsasl2-modules-db:arm64 (2.1.27+dfsg-2) ... Setting up libasan5:arm64 (9.3.0-18) ... Setting up libjpeg62-turbo:arm64 (1:2.0.5-1.1) ... Setting up libnettle8:arm64 (3.6-2) ... Setting up libjpeg62-turbo-dev:arm64 (1:2.0.5-1.1) ... Setting up libgmp10:arm64 (2:6.2.0+dfsg-6) ... Setting up libp11-kit0:arm64 (0.23.21-2) ... Setting up libssl-dev:arm64 (1.1.1g-1) ... Setting up libatomic1:arm64 (10.2.0-9) ... Setting up libpbcopper-dev:arm64 (1.6.0+dfsg-4+b1) ... Setting up libk5crypto3:arm64 (1.17-10) ... Setting up libsasl2-2:arm64 (2.1.27+dfsg-2) ... Setting up libgfortran5:arm64 (10.2.0-9) ... Setting up liblzma-dev:arm64 (5.2.4-1+b1) ... Setting up libubsan1:arm64 (10.2.0-9) ... Setting up zlib1g-dev:arm64 (1:1.2.11.dfsg-2) ... Setting up libssh2-1:arm64 (1.8.0-2.1) ... Setting up libkrb5-3:arm64 (1.17-10) ... Setting up libsz2:arm64 (1.0.4-1) ... Setting up libpsl5:arm64 (0.21.0-1.1) ... Setting up libhogweed6:arm64 (3.6-2) ... Setting up libaec-dev:arm64 (1.0.4-1) ... Setting up libgcc-9-dev:arm64 (9.3.0-18) ... Setting up libgnutls30:arm64 (3.6.15-4) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libgssapi-krb5-2:arm64 (1.17-10) ... Setting up libhdf5-103-1:arm64 (1.10.6+repack-2) ... Setting up libhdf5-cpp-103-1:arm64 (1.10.6+repack-2) ... Setting up libhdf5-hl-100:arm64 (1.10.6+repack-2) ... Setting up libstdc++-9-dev:arm64 (9.3.0-18) ... Setting up libboost1.71-dev:arm64 (1.71.0-6+b2) ... Setting up libldap-2.4-2:arm64 (2.4.53+dfsg-1) ... Setting up libcurl3-gnutls:arm64 (7.72.0-1) ... Setting up libhdf5-hl-cpp-100:arm64 (1.10.6+repack-2) ... Setting up libhdf5-fortran-102:arm64 (1.10.6+repack-2) ... Setting up libhdf5-hl-fortran-100:arm64 (1.10.6+repack-2) ... Setting up libboost-dev:arm64 (1.71.0.3) ... Setting up libhts3:arm64 (1.10.2-5) ... Setting up libpbbam1.3.0:arm64 (1.3.0+dfsg-2) ... Setting up libhts-dev:arm64 (1.10.2-5) ... Setting up libhdf5-dev:arm64 (1.10.6+repack-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libpbbam-dev:arm64 (1.3.0+dfsg-2) ... Setting up sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.31-3) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-10-amd64 #1 SMP Debian 4.19.132-1 (2020-07-24) amd64 (x86_64) Toolchain package versions: binutils_2.35.1-1 dpkg-dev_1.20.5 g++-10_10.2.0-9 gcc-10_10.2.0-9 libc6-dev_2.31-3 libstdc++-10-dev_10.2.0-9 libstdc++-10-dev-arm64-cross_10.2.0-9cross1 libstdc++-9-dev_9.3.0-18 libstdc++6_10.2.0-9 libstdc++6-arm64-cross_10.2.0-9cross1 linux-libc-dev_5.8.10-1 Package versions: adduser_3.118 apt_2.1.10 autoconf_2.69-11.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-7 binutils_2.35.1-1 binutils-aarch64-linux-gnu_2.35.1-1 binutils-common_2.35.1-1 binutils-x86-64-linux-gnu_2.35.1-1 bsdextrautils_2.36-3+b1 bsdutils_1:2.36-3+b1 build-essential_12.8 bzip2_1.0.8-4 cmake_3.18.2-1 cmake-data_3.18.2-1 coreutils_8.32-4+b1 cpp_4:10.2.0-1 cpp-10_10.2.0-9 cpp-10-aarch64-linux-gnu_10.2.0-9cross1 cpp-8_8.4.0-4 cpp-aarch64-linux-gnu_4:10.2.0-1 cross-config_2.6.15-3.1 crossbuild-essential-arm64_12.8 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2.1 debian-archive-keyring_2019.1 debianutils_4.11.1 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dpkg_1.20.5 dpkg-cross_2.6.15-3.1 dpkg-dev_1.20.5 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.25.1-1 fdisk_2.36-3+b1 file_1:5.38-5 findutils_4.7.0-1 g++_4:10.2.0-1 g++-10_10.2.0-9 g++-10-aarch64-linux-gnu_10.2.0-9cross1 g++-aarch64-linux-gnu_4:10.2.0-1 gcc_4:10.2.0-1 gcc-10_10.2.0-9 gcc-10-aarch64-linux-gnu_10.2.0-9cross1 gcc-10-aarch64-linux-gnu-base_10.2.0-9cross1 gcc-10-base_10.2.0-9 gcc-10-cross-base_10.2.0-9cross1 gcc-8-base_8.4.0-4 gcc-9-base_9.3.0-18 gcc-aarch64-linux-gnu_4:10.2.0-1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 googletest_1.10.0-3 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hdf5-helpers_1.10.6+repack-2 hostname_3.23 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libaec-dev_1.0.4-1 libaec0_1.0.4-1 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.1.10 libarchive-zip-perl_1.68-1 libarchive13_3.4.3-2 libasan5_9.3.0-18 libasan6_10.2.0-9 libasan6-arm64-cross_10.2.0-9cross1 libatomic1_10.2.0-9 libatomic1-arm64-cross_10.2.0-9cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3+b1 libbinutils_2.35.1-1 libblkid1_2.36-3+b1 libboost-dev_1.71.0.3 libboost1.71-dev_1.71.0-6+b2 libbrotli1_1.0.9-2 libbz2-1.0_1.0.8-4 libc-bin_2.31-3 libc-dev-bin_2.31-3 libc6_2.31-3 libc6-arm64-cross_2.31-1cross2 libc6-dev_2.31-3 libc6-dev-arm64-cross_2.31-1cross2 libcap-ng0_0.7.9-2.2 libcc1-0_10.2.0-9 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000003-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-1 libctf0_2.35.1-1 libcurl3-gnutls_7.72.0-1 libcurl4_7.72.0-1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.254 libdebhelper-perl_13.2.1 libdebian-dpkgcross-perl_2.6.15-3.1 libdeflate0_1.6-1 libdpkg-perl_1.20.5 libelf1_0.181-1 libexpat1_2.2.9-1 libext2fs2_1.45.6-1 libfakeroot_1.25.1-1 libfdisk1_2.36-3+b1 libffi6_3.2.1-9 libffi7_3.3-4 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.9.0-1 libfile-which-perl_1.23-1 libgcc-10-dev_10.2.0-9 libgcc-10-dev-arm64-cross_10.2.0-9cross1 libgcc-9-dev_9.3.0-18 libgcc-s1_10.2.0-9 libgcc-s1-arm64-cross_10.2.0-9cross1 libgcrypt20_1.8.6-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libgfortran5_10.2.0-9 libglib2.0-0_2.66.0-2 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.15-4 libgomp1_10.2.0-9 libgomp1-arm64-cross_10.2.0-9cross1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.17-10 libgtest-dev_1.10.0-3 libhdf5-103-1_1.10.6+repack-2 libhdf5-cpp-103-1_1.10.6+repack-2 libhdf5-dev_1.10.6+repack-2 libhdf5-fortran-102_1.10.6+repack-2 libhdf5-hl-100_1.10.6+repack-2 libhdf5-hl-cpp-100_1.10.6+repack-2 libhdf5-hl-fortran-100_1.10.6+repack-2 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.6-2 libhts-dev_1.10.2-5 libhts3_1.10.2-5 libicu67_67.1-4 libidn2-0_2.3.0-1 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 libitm1_10.2.0-9 libitm1-arm64-cross_10.2.0-9cross1 libjpeg62-turbo_1:2.0.5-1.1 libjpeg62-turbo-dev_1:2.0.5-1.1 libjsoncpp1_1.7.4-3.1 libk5crypto3_1.17-10 libkeyutils1_1.6.1-2 libkrb5-3_1.17-10 libkrb5support0_1.17-10 libldap-2.4-2_2.4.53+dfsg-1 liblocale-gettext-perl_1.07-4 liblsan0_10.2.0-9 liblsan0-arm64-cross_10.2.0-9cross1 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1+b1 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.36-3+b1 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libmpx2_8.4.0-4 libncurses6_6.2+20200918-1 libncursesw6_6.2+20200918-1 libnettle6_3.5.1+really3.4.1-1 libnettle8_3.6-2 libnghttp2-14_1.41.0-3 libp11-kit0_0.23.21-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpbbam-dev_1.3.0+dfsg-2 libpbbam1.3.0_1.3.0+dfsg-2 libpbcopper-dev_1.6.0+dfsg-4+b1 libpbcopper1.6.0_1.6.0+dfsg-4+b1 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.28_5.28.1-6 libperl5.30_5.30.3-4 libpipeline1_1.5.3-1 libprocps8_2:3.3.16-5 libpsl5_0.21.0-1.1 libpython3-stdlib_3.8.2-3 libpython3.8-minimal_3.8.6-1 libpython3.8-stdlib_3.8.6-1 libquadmath0_10.2.0-9 libreadline8_8.0-4 librhash0_1.4.0-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.4-1 libselinux1_3.1-2 libsemanage-common_3.1-1 libsemanage1_3.1-1 libsepol1_3.1-1 libsigsegv2_2.12-2 libsmartcols1_2.36-3+b1 libsqlite3-0_3.33.0-1 libss2_1.45.6-1 libssh2-1_1.8.0-2.1 libssl-dev_1.1.1g-1 libssl1.1_1.1.1g-1 libstdc++-10-dev_10.2.0-9 libstdc++-10-dev-arm64-cross_10.2.0-9cross1 libstdc++-9-dev_9.3.0-18 libstdc++6_10.2.0-9 libstdc++6-arm64-cross_10.2.0-9cross1 libsub-override-perl_0.09-2 libsystemd0_246.6-1 libsz2_1.0.4-1 libtasn1-6_4.16.0-2 libtinfo6_6.2+20200918-1 libtool_2.4.6-14 libtsan0_10.2.0-9 libtsan0-arm64-cross_10.2.0-9cross1 libubsan1_10.2.0-9 libubsan1-arm64-cross_10.2.0-9cross1 libuchardet0_0.0.7-1 libudev1_246.6-1 libunistring2_0.9.10-4 libuuid1_2.36-3+b1 libuv1_1.39.0-1 libxml-libxml-perl_2.0134+dfsg-2 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-6 libyaml-perl_1.30-1 libzstd1_1.4.5+dfsg-4 linux-libc-dev_5.8.10-1 linux-libc-dev-arm64-cross_5.7.6-1cross2 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 meson_0.55.3-1 mime-support_3.64 mount_2.36-3+b1 ncurses-base_6.2+20200918-1 ncurses-bin_6.2+20200918-1 ninja-build_1.10.1-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.3-4 pkg-config_0.29.2-1 po-debconf_1.0.21 procps_2:3.3.16-5 python3_3.8.2-3 python3-minimal_3.8.2-3 python3-pkg-resources_49.3.1-2 python3.8_3.8.6-1 python3.8-minimal_3.8.6-1 readline-common_8.0-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-5 tar_1.30+dfsg-7 tzdata_2020a-1 ucf_3.0043 util-linux_2.36-3+b1 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: pbseqlib Binary: libpbseq, libpbseq-dev, libpbdata-dev, libpbihdf-dev, libblasr-dev, libblasr Architecture: any all Version: 5.3.3+dfsg-4 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/PacificBiosciences/blasr_libcpp Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/pbseqlib Vcs-Git: https://salsa.debian.org/med-team/pbseqlib.git Build-Depends: debhelper-compat (= 12), meson, pkg-config, cmake, googletest, libgtest-dev, zlib1g-dev, libhdf5-dev, libboost-dev, libpbbam-dev (>= 0.18.0+dfsg-1~), libpbcopper-dev, libhts-dev Package-List: libblasr deb libs optional arch=any libblasr-dev deb libdevel optional arch=any libpbdata-dev deb libdevel optional arch=all libpbihdf-dev deb libdevel optional arch=all libpbseq deb libs optional arch=all libpbseq-dev deb libdevel optional arch=any Checksums-Sha1: bab056887c594ed5d2c55b1164e8bef06b69979f 970424 pbseqlib_5.3.3+dfsg.orig.tar.xz 6bfeadc0b5e4018f7135c87930dcb4921032a60c 8976 pbseqlib_5.3.3+dfsg-4.debian.tar.xz Checksums-Sha256: 6a8efe8dec8e2ffc9b503ad392b06732262279451a3b2dd40a617b2309d1dcdc 970424 pbseqlib_5.3.3+dfsg.orig.tar.xz 6fe618d2ab82254e59d8c4e5e78a13599a99ca88197a8a4f7d3fa4c124287177 8976 pbseqlib_5.3.3+dfsg-4.debian.tar.xz Files: 41bcbf16cb8a5995de099388d7559b60 970424 pbseqlib_5.3.3+dfsg.orig.tar.xz bc0bd7892a95857d7401b4b8f4224896 8976 pbseqlib_5.3.3+dfsg-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl4xmFIRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHABw//SevdRaF/IP3QoJgDkdfxPtRtI3zf71RC HzjwAh3GyH2GCnk5uyMNte0hQMs8ipQLRquAFdm3KLMcJyuhABs7KD6w7YYQkja7 Y9LcAnxP+lOOTlrjvVBn9R7rNNRBuxfzD8kKPD88qhbEBm8qSxiJzJ+y5vUE1yti hYva8juuvs0YQ9htp5eNgEhyD9xFKHcmNMMCDfsNy5SL+0P55pq9ZEI958aLlNCM /jmToWRLCOLzcr4Dt/Db9mw5Vmv7l1IwQN6A4MgGheYBoAxzMAWn70NSNioeYxie ZwihiroL86XhSDhX/M/sycFZ6geRi1PvFnP0hnEDW6/7yTQAbDLT7cLYxLWv6KMA 4BdCt4opf/982OAnzEPkC0cMg7vQRpQYKbXWSy2hVPFPbc3x831+IaS58uK4M3c6 HKr+w6ggVQSS0j7QF/1QKO22bF3fj5wXieEixIPdLS6AUlkO/s/fmFNAYd2aoDTD JkEqxpjDxPpRgg3rJ0oRU3E3CNsZQkf7NV5rh8ONCLrAdksriF2RLReUDQEoQQY/ YHgjL123LUiUEwqqIh2cicoXptc9b6wiK6FHBF1q4TId/wfbqU8GnOdNro1BzKNP 3MVsoGqjYDUhM47pYAga/xgrXppFG2HXLF+YzM7+ZT2JHXfGr4xLqAiYmv6DCdQa +zxcghNlRvg= =iyPR -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.AqSiWX5J/trustedkeys.kbx': General error gpgv: Signature made Wed Jan 29 14:36:02 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./pbseqlib_5.3.3+dfsg-4.dsc dpkg-source: info: extracting pbseqlib in /<> dpkg-source: info: unpacking pbseqlib_5.3.3+dfsg.orig.tar.xz dpkg-source: info: unpacking pbseqlib_5.3.3+dfsg-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hdf5-1.10.1-support.patch dpkg-source: info: applying hdf5-1.10.0-support.patch dpkg-source: info: applying meson.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.arm64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-73dcc4cb-ef8b-4334-b20e-6cff6c57f0ea SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarm64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package pbseqlib dpkg-buildpackage: info: source version 5.3.3+dfsg-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type aarch64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean find -name defines.mk -delete rm -f pbdata/libconfig.h make[1]: Leaving directory '/<>' dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a cd obj-aarch64-linux-gnu && LC_ALL=C.UTF-8 meson .. --wrap-mode=nodownload --buildtype=plain --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/aarch64-linux-gnu --cross-file /<>/pbseqlib-5.3.3\+dfsg/debian/.debhelper/generated/_source/meson-cross-file.conf The Meson build system Version: 0.55.3 Source dir: /<> Build dir: /<>/obj-aarch64-linux-gnu Build type: cross build Project name: libblasr Project version: 5.3.3 C++ compiler for the build machine: c++ (gcc 10.2.0 "c++ (Debian 10.2.0-9) 10.2.0") C++ linker for the build machine: c++ ld.bfd 2.35.1 Using 'CXXFLAGS' from environment with value: '-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14' Using 'LDFLAGS' from environment with value: '-Wl,-z,relro -Wl,-z,now' Using 'CPPFLAGS' from environment with value: '-Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -I/usr/include/hdf5/serial' C++ compiler for the host machine: /usr/bin/aarch64-linux-gnu-g++ (gcc 10.2.0 "aarch64-linux-gnu-g++ (Debian 10.2.0-9) 10.2.0") C++ linker for the host machine: /usr/bin/aarch64-linux-gnu-g++ ld.bfd 2.35.1 Build machine cpu family: x86_64 Build machine cpu: x86_64 Host machine cpu family: aarch64 Host machine cpu: arm64 Target machine cpu family: aarch64 Target machine cpu: arm64 Compiler for C++ supports arguments -Wno-delete-non-virtual-dtor -Wdelete-non-virtual-dtor: YES Compiler for C++ supports arguments -Wno-unused-variable -Wunused-variable: YES Compiler for C++ supports arguments -Wno-non-virtual-dtor -Wnon-virtual-dtor: YES Found pkg-config: /usr/bin/aarch64-linux-gnu-pkg-config (0.29.2) Run-time dependency Boost found: YES 1.71.0 (/usr/include) Run-time dependency pbbam found: YES 1.3.0 Run-time dependency zlib found: YES 1.2.11 Library rt found: YES WARNING: Project targeting '>= 0.46.0' but tried to use feature introduced in '0.49.0': disabler arg in dependency. Run-time dependency HDF5 for cpp found: YES 1.10.6 Configuring LibBlasrConfig.h using configuration Program tools/check-formatting found: YES WARNING: Project targeting '>= 0.46.0' but tried to use feature introduced in '0.53.0': Fallback without variable name. Run-time dependency GTest found: YES 1.10.0 Build targets in project: 2 WARNING: Project specifies a minimum meson_version '>= 0.46.0' but uses features which were added in newer versions: * 0.49.0: {'disabler arg in dependency'} * 0.53.0: {'Fallback without variable name'} Option buildtype is: plain [default: release] Found ninja-1.10.1 at /usr/bin/ninja dh_auto_build -a cd obj-aarch64-linux-gnu && LC_ALL=C.UTF-8 ninja -j1 -v [1/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_BufferedHDF2DArray.cpp.o -MF libblasr.so.5.3.3.p/hdf_BufferedHDF2DArray.cpp.o.d -o libblasr.so.5.3.3.p/hdf_BufferedHDF2DArray.cpp.o -c ../hdf/BufferedHDF2DArray.cpp [2/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_BufferedHDFArray.cpp.o -MF libblasr.so.5.3.3.p/hdf_BufferedHDFArray.cpp.o.d -o libblasr.so.5.3.3.p/hdf_BufferedHDFArray.cpp.o -c ../hdf/BufferedHDFArray.cpp [3/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_DatasetCollection.cpp.o -MF libblasr.so.5.3.3.p/hdf_DatasetCollection.cpp.o.d -o libblasr.so.5.3.3.p/hdf_DatasetCollection.cpp.o -c ../hdf/DatasetCollection.cpp [4/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFAlnGroupGroup.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFAlnGroupGroup.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFAlnGroupGroup.cpp.o -c ../hdf/HDFAlnGroupGroup.cpp [5/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFAlnInfoGroup.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFAlnInfoGroup.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFAlnInfoGroup.cpp.o -c ../hdf/HDFAlnInfoGroup.cpp [6/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFAtom.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFAtom.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFAtom.cpp.o -c ../hdf/HDFAtom.cpp [7/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFAttributable.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFAttributable.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFAttributable.cpp.o -c ../hdf/HDFAttributable.cpp [8/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFBaseCallsWriter.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFBaseCallsWriter.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFBaseCallsWriter.cpp.o -c ../hdf/HDFBaseCallsWriter.cpp [9/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFBaxWriter.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFBaxWriter.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFBaxWriter.cpp.o -c ../hdf/HDFBaxWriter.cpp [10/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFCmpExperimentGroup.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFCmpExperimentGroup.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFCmpExperimentGroup.cpp.o -c ../hdf/HDFCmpExperimentGroup.cpp [11/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFCmpSupportedFields.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFCmpSupportedFields.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFCmpSupportedFields.cpp.o -c ../hdf/HDFCmpSupportedFields.cpp [12/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFData.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFData.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFData.cpp.o -c ../hdf/HDFData.cpp [13/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFFile.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFFile.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFFile.cpp.o -c ../hdf/HDFFile.cpp [14/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFGroup.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFGroup.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFGroup.cpp.o -c ../hdf/HDFGroup.cpp [15/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFNewBasReader.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFNewBasReader.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFNewBasReader.cpp.o -c ../hdf/HDFNewBasReader.cpp [16/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFPulseCallsWriter.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFPulseCallsWriter.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFPulseCallsWriter.cpp.o -c ../hdf/HDFPulseCallsWriter.cpp [17/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFPulseDataFile.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFPulseDataFile.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFPulseDataFile.cpp.o -c ../hdf/HDFPulseDataFile.cpp [18/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFPulseH5Writer.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFPulseH5Writer.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFPulseH5Writer.cpp.o -c ../hdf/HDFPulseH5Writer.cpp [19/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFPulseWriter.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFPulseWriter.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFPulseWriter.cpp.o -c ../hdf/HDFPulseWriter.cpp [20/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFRegionsWriter.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFRegionsWriter.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFRegionsWriter.cpp.o -c ../hdf/HDFRegionsWriter.cpp [21/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFRegionTableReader.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFRegionTableReader.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFRegionTableReader.cpp.o -c ../hdf/HDFRegionTableReader.cpp [22/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFScanDataReader.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFScanDataReader.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFScanDataReader.cpp.o -c ../hdf/HDFScanDataReader.cpp [23/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFScanDataWriter.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFScanDataWriter.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFScanDataWriter.cpp.o -c ../hdf/HDFScanDataWriter.cpp [24/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFUtils.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFUtils.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFUtils.cpp.o -c ../hdf/HDFUtils.cpp [25/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFWriterBase.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFWriterBase.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFWriterBase.cpp.o -c ../hdf/HDFWriterBase.cpp [26/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFZMWMetricsWriter.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFZMWMetricsWriter.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFZMWMetricsWriter.cpp.o -c ../hdf/HDFZMWMetricsWriter.cpp [27/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFZMWReader.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFZMWReader.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFZMWReader.cpp.o -c ../hdf/HDFZMWReader.cpp [28/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/hdf_HDFZMWWriter.cpp.o -MF libblasr.so.5.3.3.p/hdf_HDFZMWWriter.cpp.o.d -o libblasr.so.5.3.3.p/hdf_HDFZMWWriter.cpp.o -c ../hdf/HDFZMWWriter.cpp [29/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_algorithms_alignment_sdp_SDPFragment.cpp.o -MF libblasr.so.5.3.3.p/alignment_algorithms_alignment_sdp_SDPFragment.cpp.o.d -o libblasr.so.5.3.3.p/alignment_algorithms_alignment_sdp_SDPFragment.cpp.o -c ../alignment/algorithms/alignment/sdp/SDPFragment.cpp [30/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_algorithms_alignment_sdp_SparseDynamicProgramming.cpp.o -MF libblasr.so.5.3.3.p/alignment_algorithms_alignment_sdp_SparseDynamicProgramming.cpp.o.d -o libblasr.so.5.3.3.p/alignment_algorithms_alignment_sdp_SparseDynamicProgramming.cpp.o -c ../alignment/algorithms/alignment/sdp/SparseDynamicProgramming.cpp [31/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_algorithms_alignment_AlignmentUtils.cpp.o -MF libblasr.so.5.3.3.p/alignment_algorithms_alignment_AlignmentUtils.cpp.o.d -o libblasr.so.5.3.3.p/alignment_algorithms_alignment_AlignmentUtils.cpp.o -c ../alignment/algorithms/alignment/AlignmentUtils.cpp [32/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_algorithms_alignment_BaseScoreFunction.cpp.o -MF libblasr.so.5.3.3.p/alignment_algorithms_alignment_BaseScoreFunction.cpp.o.d -o libblasr.so.5.3.3.p/alignment_algorithms_alignment_BaseScoreFunction.cpp.o -c ../alignment/algorithms/alignment/BaseScoreFunction.cpp [33/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_algorithms_alignment_ExtendAlign.cpp.o -MF libblasr.so.5.3.3.p/alignment_algorithms_alignment_ExtendAlign.cpp.o.d -o libblasr.so.5.3.3.p/alignment_algorithms_alignment_ExtendAlign.cpp.o -c ../alignment/algorithms/alignment/ExtendAlign.cpp [34/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_algorithms_alignment_GuidedAlign.cpp.o -MF libblasr.so.5.3.3.p/alignment_algorithms_alignment_GuidedAlign.cpp.o.d -o libblasr.so.5.3.3.p/alignment_algorithms_alignment_GuidedAlign.cpp.o -c ../alignment/algorithms/alignment/GuidedAlign.cpp [35/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_algorithms_alignment_IDSScoreFunction.cpp.o -MF libblasr.so.5.3.3.p/alignment_algorithms_alignment_IDSScoreFunction.cpp.o.d -o libblasr.so.5.3.3.p/alignment_algorithms_alignment_IDSScoreFunction.cpp.o -c ../alignment/algorithms/alignment/IDSScoreFunction.cpp [36/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_algorithms_alignment_KBandAlign.cpp.o -MF libblasr.so.5.3.3.p/alignment_algorithms_alignment_KBandAlign.cpp.o.d -o libblasr.so.5.3.3.p/alignment_algorithms_alignment_KBandAlign.cpp.o -c ../alignment/algorithms/alignment/KBandAlign.cpp [37/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_algorithms_alignment_QualityValueScoreFunction.cpp.o -MF libblasr.so.5.3.3.p/alignment_algorithms_alignment_QualityValueScoreFunction.cpp.o.d -o libblasr.so.5.3.3.p/alignment_algorithms_alignment_QualityValueScoreFunction.cpp.o -c ../alignment/algorithms/alignment/QualityValueScoreFunction.cpp [38/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_algorithms_alignment_ScoreMatrices.cpp.o -MF libblasr.so.5.3.3.p/alignment_algorithms_alignment_ScoreMatrices.cpp.o.d -o libblasr.so.5.3.3.p/alignment_algorithms_alignment_ScoreMatrices.cpp.o -c ../alignment/algorithms/alignment/ScoreMatrices.cpp [39/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_algorithms_alignment_StringToScoreMatrix.cpp.o -MF libblasr.so.5.3.3.p/alignment_algorithms_alignment_StringToScoreMatrix.cpp.o.d -o libblasr.so.5.3.3.p/alignment_algorithms_alignment_StringToScoreMatrix.cpp.o -c ../alignment/algorithms/alignment/StringToScoreMatrix.cpp [40/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_algorithms_anchoring_BWTSearch.cpp.o -MF libblasr.so.5.3.3.p/alignment_algorithms_anchoring_BWTSearch.cpp.o.d -o libblasr.so.5.3.3.p/alignment_algorithms_anchoring_BWTSearch.cpp.o -c ../alignment/algorithms/anchoring/BWTSearch.cpp [41/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_algorithms_anchoring_ClusterProbability.cpp.o -MF libblasr.so.5.3.3.p/alignment_algorithms_anchoring_ClusterProbability.cpp.o.d -o libblasr.so.5.3.3.p/alignment_algorithms_anchoring_ClusterProbability.cpp.o -c ../alignment/algorithms/anchoring/ClusterProbability.cpp [42/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_algorithms_anchoring_Coordinate.cpp.o -MF libblasr.so.5.3.3.p/alignment_algorithms_anchoring_Coordinate.cpp.o.d -o libblasr.so.5.3.3.p/alignment_algorithms_anchoring_Coordinate.cpp.o -c ../alignment/algorithms/anchoring/Coordinate.cpp [43/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_algorithms_anchoring_FindMaxInterval.cpp.o -MF libblasr.so.5.3.3.p/alignment_algorithms_anchoring_FindMaxInterval.cpp.o.d -o libblasr.so.5.3.3.p/alignment_algorithms_anchoring_FindMaxInterval.cpp.o -c ../alignment/algorithms/anchoring/FindMaxInterval.cpp [44/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_algorithms_sorting_DifferenceCovers.cpp.o -MF libblasr.so.5.3.3.p/alignment_algorithms_sorting_DifferenceCovers.cpp.o.d -o libblasr.so.5.3.3.p/alignment_algorithms_sorting_DifferenceCovers.cpp.o -c ../alignment/algorithms/sorting/DifferenceCovers.cpp [45/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_algorithms_sorting_LightweightSuffixArray.cpp.o -MF libblasr.so.5.3.3.p/alignment_algorithms_sorting_LightweightSuffixArray.cpp.o.d -o libblasr.so.5.3.3.p/alignment_algorithms_sorting_LightweightSuffixArray.cpp.o -c ../alignment/algorithms/sorting/LightweightSuffixArray.cpp [46/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_algorithms_sorting_MultikeyQuicksort.cpp.o -MF libblasr.so.5.3.3.p/alignment_algorithms_sorting_MultikeyQuicksort.cpp.o.d -o libblasr.so.5.3.3.p/alignment_algorithms_sorting_MultikeyQuicksort.cpp.o -c ../alignment/algorithms/sorting/MultikeyQuicksort.cpp [47/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_algorithms_sorting_qsufsort.cpp.o -MF libblasr.so.5.3.3.p/alignment_algorithms_sorting_qsufsort.cpp.o.d -o libblasr.so.5.3.3.p/alignment_algorithms_sorting_qsufsort.cpp.o -c ../alignment/algorithms/sorting/qsufsort.cpp [48/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_datastructures_alignment_AlignmentCandidate.cpp.o -MF libblasr.so.5.3.3.p/alignment_datastructures_alignment_AlignmentCandidate.cpp.o.d -o libblasr.so.5.3.3.p/alignment_datastructures_alignment_AlignmentCandidate.cpp.o -c ../alignment/datastructures/alignment/AlignmentCandidate.cpp [49/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_datastructures_alignment_AlignmentContext.cpp.o -MF libblasr.so.5.3.3.p/alignment_datastructures_alignment_AlignmentContext.cpp.o.d -o libblasr.so.5.3.3.p/alignment_datastructures_alignment_AlignmentContext.cpp.o -c ../alignment/datastructures/alignment/AlignmentContext.cpp [50/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_datastructures_alignment_Alignment.cpp.o -MF libblasr.so.5.3.3.p/alignment_datastructures_alignment_Alignment.cpp.o.d -o libblasr.so.5.3.3.p/alignment_datastructures_alignment_Alignment.cpp.o -c ../alignment/datastructures/alignment/Alignment.cpp [51/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_datastructures_alignment_AlignmentMap.cpp.o -MF libblasr.so.5.3.3.p/alignment_datastructures_alignment_AlignmentMap.cpp.o.d -o libblasr.so.5.3.3.p/alignment_datastructures_alignment_AlignmentMap.cpp.o -c ../alignment/datastructures/alignment/AlignmentMap.cpp [52/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_datastructures_alignment_AlignmentStats.cpp.o -MF libblasr.so.5.3.3.p/alignment_datastructures_alignment_AlignmentStats.cpp.o.d -o libblasr.so.5.3.3.p/alignment_datastructures_alignment_AlignmentStats.cpp.o -c ../alignment/datastructures/alignment/AlignmentStats.cpp [53/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_datastructures_alignment_CmpFile.cpp.o -MF libblasr.so.5.3.3.p/alignment_datastructures_alignment_CmpFile.cpp.o.d -o libblasr.so.5.3.3.p/alignment_datastructures_alignment_CmpFile.cpp.o -c ../alignment/datastructures/alignment/CmpFile.cpp [54/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_datastructures_alignment_FilterCriteria.cpp.o -MF libblasr.so.5.3.3.p/alignment_datastructures_alignment_FilterCriteria.cpp.o.d -o libblasr.so.5.3.3.p/alignment_datastructures_alignment_FilterCriteria.cpp.o -c ../alignment/datastructures/alignment/FilterCriteria.cpp [55/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_datastructures_alignment_SAMToAlignmentCandidateAdapter.cpp.o -MF libblasr.so.5.3.3.p/alignment_datastructures_alignment_SAMToAlignmentCandidateAdapter.cpp.o.d -o libblasr.so.5.3.3.p/alignment_datastructures_alignment_SAMToAlignmentCandidateAdapter.cpp.o -c ../alignment/datastructures/alignment/SAMToAlignmentCandidateAdapter.cpp [56/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_datastructures_alignmentset_SAMQVConversion.cpp.o -MF libblasr.so.5.3.3.p/alignment_datastructures_alignmentset_SAMQVConversion.cpp.o.d -o libblasr.so.5.3.3.p/alignment_datastructures_alignmentset_SAMQVConversion.cpp.o -c ../alignment/datastructures/alignmentset/SAMQVConversion.cpp [57/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_datastructures_alignmentset_SAMSupplementalQVList.cpp.o -MF libblasr.so.5.3.3.p/alignment_datastructures_alignmentset_SAMSupplementalQVList.cpp.o.d -o libblasr.so.5.3.3.p/alignment_datastructures_alignmentset_SAMSupplementalQVList.cpp.o -c ../alignment/datastructures/alignmentset/SAMSupplementalQVList.cpp [58/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_datastructures_anchoring_AnchorParameters.cpp.o -MF libblasr.so.5.3.3.p/alignment_datastructures_anchoring_AnchorParameters.cpp.o.d -o libblasr.so.5.3.3.p/alignment_datastructures_anchoring_AnchorParameters.cpp.o -c ../alignment/datastructures/anchoring/AnchorParameters.cpp [59/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_datastructures_anchoring_ClusterList.cpp.o -MF libblasr.so.5.3.3.p/alignment_datastructures_anchoring_ClusterList.cpp.o.d -o libblasr.so.5.3.3.p/alignment_datastructures_anchoring_ClusterList.cpp.o -c ../alignment/datastructures/anchoring/ClusterList.cpp [60/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_datastructures_anchoring_MatchPos.cpp.o -MF libblasr.so.5.3.3.p/alignment_datastructures_anchoring_MatchPos.cpp.o.d -o libblasr.so.5.3.3.p/alignment_datastructures_anchoring_MatchPos.cpp.o -c ../alignment/datastructures/anchoring/MatchPos.cpp [61/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_datastructures_anchoring_WeightedInterval.cpp.o -MF libblasr.so.5.3.3.p/alignment_datastructures_anchoring_WeightedInterval.cpp.o.d -o libblasr.so.5.3.3.p/alignment_datastructures_anchoring_WeightedInterval.cpp.o -c ../alignment/datastructures/anchoring/WeightedInterval.cpp [62/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_files_BaseSequenceIO.cpp.o -MF libblasr.so.5.3.3.p/alignment_files_BaseSequenceIO.cpp.o.d -o libblasr.so.5.3.3.p/alignment_files_BaseSequenceIO.cpp.o -c ../alignment/files/BaseSequenceIO.cpp [63/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_files_CCSIterator.cpp.o -MF libblasr.so.5.3.3.p/alignment_files_CCSIterator.cpp.o.d -o libblasr.so.5.3.3.p/alignment_files_CCSIterator.cpp.o -c ../alignment/files/CCSIterator.cpp [64/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_files_FragmentCCSIterator.cpp.o -MF libblasr.so.5.3.3.p/alignment_files_FragmentCCSIterator.cpp.o.d -o libblasr.so.5.3.3.p/alignment_files_FragmentCCSIterator.cpp.o -c ../alignment/files/FragmentCCSIterator.cpp [65/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_FASTASequence.cpp.o -MF libblasr.so.5.3.3.p/pbdata_FASTASequence.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_FASTASequence.cpp.o -c ../pbdata/FASTASequence.cpp [66/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_files_ReaderAgglomerate.cpp.o -MF libblasr.so.5.3.3.p/alignment_files_ReaderAgglomerate.cpp.o.d -o libblasr.so.5.3.3.p/alignment_files_ReaderAgglomerate.cpp.o -c ../alignment/files/ReaderAgglomerate.cpp [67/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_format_CompareSequencesPrinter.cpp.o -MF libblasr.so.5.3.3.p/alignment_format_CompareSequencesPrinter.cpp.o.d -o libblasr.so.5.3.3.p/alignment_format_CompareSequencesPrinter.cpp.o -c ../alignment/format/CompareSequencesPrinter.cpp [68/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_format_IntervalPrinter.cpp.o -MF libblasr.so.5.3.3.p/alignment_format_IntervalPrinter.cpp.o.d -o libblasr.so.5.3.3.p/alignment_format_IntervalPrinter.cpp.o -c ../alignment/format/IntervalPrinter.cpp [69/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_format_SAMHeaderPrinter.cpp.o -MF libblasr.so.5.3.3.p/alignment_format_SAMHeaderPrinter.cpp.o.d -o libblasr.so.5.3.3.p/alignment_format_SAMHeaderPrinter.cpp.o -c ../alignment/format/SAMHeaderPrinter.cpp [70/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_format_SAMPrinter.cpp.o -MF libblasr.so.5.3.3.p/alignment_format_SAMPrinter.cpp.o.d -o libblasr.so.5.3.3.p/alignment_format_SAMPrinter.cpp.o -c ../alignment/format/SAMPrinter.cpp [71/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_format_SummaryPrinter.cpp.o -MF libblasr.so.5.3.3.p/alignment_format_SummaryPrinter.cpp.o.d -o libblasr.so.5.3.3.p/alignment_format_SummaryPrinter.cpp.o -c ../alignment/format/SummaryPrinter.cpp [72/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_query_PbiFilterZmwGroupQuery.cpp.o -MF libblasr.so.5.3.3.p/alignment_query_PbiFilterZmwGroupQuery.cpp.o.d -o libblasr.so.5.3.3.p/alignment_query_PbiFilterZmwGroupQuery.cpp.o -c ../alignment/query/PbiFilterZmwGroupQuery.cpp [73/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_query_SequentialZmwGroupQuery.cpp.o -MF libblasr.so.5.3.3.p/alignment_query_SequentialZmwGroupQuery.cpp.o.d -o libblasr.so.5.3.3.p/alignment_query_SequentialZmwGroupQuery.cpp.o -c ../alignment/query/SequentialZmwGroupQuery.cpp [74/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_qvs_QualityValueProfile.cpp.o -MF libblasr.so.5.3.3.p/alignment_qvs_QualityValueProfile.cpp.o.d -o libblasr.so.5.3.3.p/alignment_qvs_QualityValueProfile.cpp.o -c ../alignment/qvs/QualityValueProfile.cpp [75/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_simulator_ContextSample.cpp.o -MF libblasr.so.5.3.3.p/alignment_simulator_ContextSample.cpp.o.d -o libblasr.so.5.3.3.p/alignment_simulator_ContextSample.cpp.o -c ../alignment/simulator/ContextSample.cpp [76/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_simulator_ContextSet.cpp.o -MF libblasr.so.5.3.3.p/alignment_simulator_ContextSet.cpp.o.d -o libblasr.so.5.3.3.p/alignment_simulator_ContextSet.cpp.o -c ../alignment/simulator/ContextSet.cpp [77/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_simulator_LengthHistogram.cpp.o -MF libblasr.so.5.3.3.p/alignment_simulator_LengthHistogram.cpp.o.d -o libblasr.so.5.3.3.p/alignment_simulator_LengthHistogram.cpp.o -c ../alignment/simulator/LengthHistogram.cpp [78/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_simulator_QualitySample.cpp.o -MF libblasr.so.5.3.3.p/alignment_simulator_QualitySample.cpp.o.d -o libblasr.so.5.3.3.p/alignment_simulator_QualitySample.cpp.o -c ../alignment/simulator/QualitySample.cpp [79/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_statistics_cdfs.cpp.o -MF libblasr.so.5.3.3.p/alignment_statistics_cdfs.cpp.o.d -o libblasr.so.5.3.3.p/alignment_statistics_cdfs.cpp.o -c ../alignment/statistics/cdfs.cpp [80/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_statistics_LookupAnchorDistribution.cpp.o -MF libblasr.so.5.3.3.p/alignment_statistics_LookupAnchorDistribution.cpp.o.d -o libblasr.so.5.3.3.p/alignment_statistics_LookupAnchorDistribution.cpp.o -c ../alignment/statistics/LookupAnchorDistribution.cpp [81/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_statistics_pdfs.cpp.o -MF libblasr.so.5.3.3.p/alignment_statistics_pdfs.cpp.o.d -o libblasr.so.5.3.3.p/alignment_statistics_pdfs.cpp.o -c ../alignment/statistics/pdfs.cpp [82/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_statistics_StatUtils.cpp.o -MF libblasr.so.5.3.3.p/alignment_statistics_StatUtils.cpp.o.d -o libblasr.so.5.3.3.p/alignment_statistics_StatUtils.cpp.o -c ../alignment/statistics/StatUtils.cpp [83/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_tuples_BaseTuple.cpp.o -MF libblasr.so.5.3.3.p/alignment_tuples_BaseTuple.cpp.o.d -o libblasr.so.5.3.3.p/alignment_tuples_BaseTuple.cpp.o -c ../alignment/tuples/BaseTuple.cpp [84/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_tuples_DNATuple.cpp.o -MF libblasr.so.5.3.3.p/alignment_tuples_DNATuple.cpp.o.d -o libblasr.so.5.3.3.p/alignment_tuples_DNATuple.cpp.o -c ../alignment/tuples/DNATuple.cpp [85/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_tuples_TupleMetrics.cpp.o -MF libblasr.so.5.3.3.p/alignment_tuples_TupleMetrics.cpp.o.d -o libblasr.so.5.3.3.p/alignment_tuples_TupleMetrics.cpp.o -c ../alignment/tuples/TupleMetrics.cpp [86/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_utils_BlasrFileUtils.cpp.o -MF libblasr.so.5.3.3.p/alignment_utils_BlasrFileUtils.cpp.o.d -o libblasr.so.5.3.3.p/alignment_utils_BlasrFileUtils.cpp.o -c ../alignment/utils/BlasrFileUtils.cpp [87/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_utils_FileOfFileNames.cpp.o -MF libblasr.so.5.3.3.p/alignment_utils_FileOfFileNames.cpp.o.d -o libblasr.so.5.3.3.p/alignment_utils_FileOfFileNames.cpp.o -c ../alignment/utils/FileOfFileNames.cpp [88/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_utils_LogUtils.cpp.o -MF libblasr.so.5.3.3.p/alignment_utils_LogUtils.cpp.o.d -o libblasr.so.5.3.3.p/alignment_utils_LogUtils.cpp.o -c ../alignment/utils/LogUtils.cpp [89/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_utils_PhredUtils.cpp.o -MF libblasr.so.5.3.3.p/alignment_utils_PhredUtils.cpp.o.d -o libblasr.so.5.3.3.p/alignment_utils_PhredUtils.cpp.o -c ../alignment/utils/PhredUtils.cpp [90/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_utils_RangeUtils.cpp.o -MF libblasr.so.5.3.3.p/alignment_utils_RangeUtils.cpp.o.d -o libblasr.so.5.3.3.p/alignment_utils_RangeUtils.cpp.o -c ../alignment/utils/RangeUtils.cpp [91/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_utils_RegionUtils.cpp.o -MF libblasr.so.5.3.3.p/alignment_utils_RegionUtils.cpp.o.d -o libblasr.so.5.3.3.p/alignment_utils_RegionUtils.cpp.o -c ../alignment/utils/RegionUtils.cpp [92/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/alignment_MappingMetrics.cpp.o -MF libblasr.so.5.3.3.p/alignment_MappingMetrics.cpp.o.d -o libblasr.so.5.3.3.p/alignment_MappingMetrics.cpp.o -c ../alignment/MappingMetrics.cpp [93/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_alignment_CmpAlignment.cpp.o -MF libblasr.so.5.3.3.p/pbdata_alignment_CmpAlignment.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_alignment_CmpAlignment.cpp.o -c ../pbdata/alignment/CmpAlignment.cpp [94/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_amos_AfgBasWriter.cpp.o -MF libblasr.so.5.3.3.p/pbdata_amos_AfgBasWriter.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_amos_AfgBasWriter.cpp.o -c ../pbdata/amos/AfgBasWriter.cpp [95/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_loadpulses_MetricField.cpp.o -MF libblasr.so.5.3.3.p/pbdata_loadpulses_MetricField.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_loadpulses_MetricField.cpp.o -c ../pbdata/loadpulses/MetricField.cpp [96/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_loadpulses_MovieAlnIndexLookupTable.cpp.o -MF libblasr.so.5.3.3.p/pbdata_loadpulses_MovieAlnIndexLookupTable.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_loadpulses_MovieAlnIndexLookupTable.cpp.o -c ../pbdata/loadpulses/MovieAlnIndexLookupTable.cpp [97/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_metagenome_TitleTable.cpp.o -MF libblasr.so.5.3.3.p/pbdata_metagenome_TitleTable.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_metagenome_TitleTable.cpp.o -c ../pbdata/metagenome/TitleTable.cpp [98/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_qvs_BlasrQualityValue.cpp.o -MF libblasr.so.5.3.3.p/pbdata_qvs_BlasrQualityValue.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_qvs_BlasrQualityValue.cpp.o -c ../pbdata/qvs/BlasrQualityValue.cpp [99/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_qvs_QualityTransform.cpp.o -MF libblasr.so.5.3.3.p/pbdata_qvs_QualityTransform.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_qvs_QualityTransform.cpp.o -c ../pbdata/qvs/QualityTransform.cpp [100/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_reads_AcqParams.cpp.o -MF libblasr.so.5.3.3.p/pbdata_reads_AcqParams.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_reads_AcqParams.cpp.o -c ../pbdata/reads/AcqParams.cpp [101/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_reads_BaseFile.cpp.o -MF libblasr.so.5.3.3.p/pbdata_reads_BaseFile.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_reads_BaseFile.cpp.o -c ../pbdata/reads/BaseFile.cpp [102/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_reads_HoleXY.cpp.o -MF libblasr.so.5.3.3.p/pbdata_reads_HoleXY.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_reads_HoleXY.cpp.o -c ../pbdata/reads/HoleXY.cpp [103/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_reads_PulseBaseCommon.cpp.o -MF libblasr.so.5.3.3.p/pbdata_reads_PulseBaseCommon.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_reads_PulseBaseCommon.cpp.o -c ../pbdata/reads/PulseBaseCommon.cpp [104/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_reads_PulseFile.cpp.o -MF libblasr.so.5.3.3.p/pbdata_reads_PulseFile.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_reads_PulseFile.cpp.o -c ../pbdata/reads/PulseFile.cpp [105/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_reads_ReadType.cpp.o -MF libblasr.so.5.3.3.p/pbdata_reads_ReadType.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_reads_ReadType.cpp.o -c ../pbdata/reads/ReadType.cpp [106/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_reads_RegionAnnotation.cpp.o -MF libblasr.so.5.3.3.p/pbdata_reads_RegionAnnotation.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_reads_RegionAnnotation.cpp.o -c ../pbdata/reads/RegionAnnotation.cpp [107/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_reads_RegionAnnotations.cpp.o -MF libblasr.so.5.3.3.p/pbdata_reads_RegionAnnotations.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_reads_RegionAnnotations.cpp.o -c ../pbdata/reads/RegionAnnotations.cpp [108/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_reads_RegionTable.cpp.o -MF libblasr.so.5.3.3.p/pbdata_reads_RegionTable.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_reads_RegionTable.cpp.o -c ../pbdata/reads/RegionTable.cpp [109/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_reads_RegionTypeMap.cpp.o -MF libblasr.so.5.3.3.p/pbdata_reads_RegionTypeMap.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_reads_RegionTypeMap.cpp.o -c ../pbdata/reads/RegionTypeMap.cpp [110/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_reads_ScanData.cpp.o -MF libblasr.so.5.3.3.p/pbdata_reads_ScanData.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_reads_ScanData.cpp.o -c ../pbdata/reads/ScanData.cpp [111/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_reads_ZMWGroupEntry.cpp.o -MF libblasr.so.5.3.3.p/pbdata_reads_ZMWGroupEntry.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_reads_ZMWGroupEntry.cpp.o -c ../pbdata/reads/ZMWGroupEntry.cpp [112/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_saf_AlnGroup.cpp.o -MF libblasr.so.5.3.3.p/pbdata_saf_AlnGroup.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_saf_AlnGroup.cpp.o -c ../pbdata/saf/AlnGroup.cpp [113/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_saf_MovieInfo.cpp.o -MF libblasr.so.5.3.3.p/pbdata_saf_MovieInfo.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_saf_MovieInfo.cpp.o -c ../pbdata/saf/MovieInfo.cpp [114/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_saf_RefGroup.cpp.o -MF libblasr.so.5.3.3.p/pbdata_saf_RefGroup.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_saf_RefGroup.cpp.o -c ../pbdata/saf/RefGroup.cpp [115/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_saf_RefInfo.cpp.o -MF libblasr.so.5.3.3.p/pbdata_saf_RefInfo.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_saf_RefInfo.cpp.o -c ../pbdata/saf/RefInfo.cpp [116/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_sam_ReadGroup.cpp.o -MF libblasr.so.5.3.3.p/pbdata_sam_ReadGroup.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_sam_ReadGroup.cpp.o -c ../pbdata/sam/ReadGroup.cpp [117/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_sam_ReferenceSequence.cpp.o -MF libblasr.so.5.3.3.p/pbdata_sam_ReferenceSequence.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_sam_ReferenceSequence.cpp.o -c ../pbdata/sam/ReferenceSequence.cpp [118/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_sam_SAMAlignment.cpp.o -MF libblasr.so.5.3.3.p/pbdata_sam_SAMAlignment.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_sam_SAMAlignment.cpp.o -c ../pbdata/sam/SAMAlignment.cpp [119/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_sam_SAMHeader.cpp.o -MF libblasr.so.5.3.3.p/pbdata_sam_SAMHeader.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_sam_SAMHeader.cpp.o -c ../pbdata/sam/SAMHeader.cpp [120/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_sam_SAMKeywordValuePair.cpp.o -MF libblasr.so.5.3.3.p/pbdata_sam_SAMKeywordValuePair.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_sam_SAMKeywordValuePair.cpp.o -c ../pbdata/sam/SAMKeywordValuePair.cpp [121/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_utils_BitUtils.cpp.o -MF libblasr.so.5.3.3.p/pbdata_utils_BitUtils.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_utils_BitUtils.cpp.o -c ../pbdata/utils/BitUtils.cpp [122/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_utils_SMRTReadUtils.cpp.o -MF libblasr.so.5.3.3.p/pbdata_utils_SMRTReadUtils.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_utils_SMRTReadUtils.cpp.o -c ../pbdata/utils/SMRTReadUtils.cpp [123/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_utils_SMRTTitle.cpp.o -MF libblasr.so.5.3.3.p/pbdata_utils_SMRTTitle.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_utils_SMRTTitle.cpp.o -c ../pbdata/utils/SMRTTitle.cpp [124/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_utils_TimeUtils.cpp.o -MF libblasr.so.5.3.3.p/pbdata_utils_TimeUtils.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_utils_TimeUtils.cpp.o -c ../pbdata/utils/TimeUtils.cpp [125/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_BlasrFASTAReader.cpp.o -MF libblasr.so.5.3.3.p/pbdata_BlasrFASTAReader.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_BlasrFASTAReader.cpp.o -c ../pbdata/BlasrFASTAReader.cpp [126/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_BlasrFASTQReader.cpp.o -MF libblasr.so.5.3.3.p/pbdata_BlasrFASTQReader.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_BlasrFASTQReader.cpp.o -c ../pbdata/BlasrFASTQReader.cpp [127/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_CCSSequence.cpp.o -MF libblasr.so.5.3.3.p/pbdata_CCSSequence.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_CCSSequence.cpp.o -c ../pbdata/CCSSequence.cpp [128/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_ChangeListID.cpp.o -MF libblasr.so.5.3.3.p/pbdata_ChangeListID.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_ChangeListID.cpp.o -c ../pbdata/ChangeListID.cpp [129/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_CommandLineParser.cpp.o -MF libblasr.so.5.3.3.p/pbdata_CommandLineParser.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_CommandLineParser.cpp.o -c ../pbdata/CommandLineParser.cpp [130/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_DNASequence.cpp.o -MF libblasr.so.5.3.3.p/pbdata_DNASequence.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_DNASequence.cpp.o -c ../pbdata/DNASequence.cpp [131/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_FASTQSequence.cpp.o -MF libblasr.so.5.3.3.p/pbdata_FASTQSequence.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_FASTQSequence.cpp.o -c ../pbdata/FASTQSequence.cpp [132/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_GFFFile.cpp.o -MF libblasr.so.5.3.3.p/pbdata_GFFFile.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_GFFFile.cpp.o -c ../pbdata/GFFFile.cpp [133/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_MD5Utils.cpp.o -MF libblasr.so.5.3.3.p/pbdata_MD5Utils.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_MD5Utils.cpp.o -c ../pbdata/MD5Utils.cpp [134/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_NucConversion.cpp.o -MF libblasr.so.5.3.3.p/pbdata_NucConversion.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_NucConversion.cpp.o -c ../pbdata/NucConversion.cpp [135/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_PackedDNASequence.cpp.o -MF libblasr.so.5.3.3.p/pbdata_PackedDNASequence.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_PackedDNASequence.cpp.o -c ../pbdata/PackedDNASequence.cpp [136/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_ReverseCompressIndex.cpp.o -MF libblasr.so.5.3.3.p/pbdata_ReverseCompressIndex.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_ReverseCompressIndex.cpp.o -c ../pbdata/ReverseCompressIndex.cpp [137/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_SMRTSequence.cpp.o -MF libblasr.so.5.3.3.p/pbdata_SMRTSequence.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_SMRTSequence.cpp.o -c ../pbdata/SMRTSequence.cpp [138/186] /usr/bin/aarch64-linux-gnu-g++ -Ilibblasr.so.5.3.3.p -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -fPIC -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ libblasr.so.5.3.3.p/pbdata_StringUtils.cpp.o -MF libblasr.so.5.3.3.p/pbdata_StringUtils.cpp.o.d -o libblasr.so.5.3.3.p/pbdata_StringUtils.cpp.o -c ../pbdata/StringUtils.cpp [139/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_reads_RegionTypeMap_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_reads_RegionTypeMap_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_reads_RegionTypeMap_gtest.cpp.o -c ../unittest/pbdata/reads/RegionTypeMap_gtest.cpp [140/186] /usr/bin/aarch64-linux-gnu-g++ -o libblasr.so.5.3.3 libblasr.so.5.3.3.p/hdf_BufferedHDF2DArray.cpp.o libblasr.so.5.3.3.p/hdf_BufferedHDFArray.cpp.o libblasr.so.5.3.3.p/hdf_DatasetCollection.cpp.o libblasr.so.5.3.3.p/hdf_HDFAlnGroupGroup.cpp.o libblasr.so.5.3.3.p/hdf_HDFAlnInfoGroup.cpp.o libblasr.so.5.3.3.p/hdf_HDFAtom.cpp.o libblasr.so.5.3.3.p/hdf_HDFAttributable.cpp.o libblasr.so.5.3.3.p/hdf_HDFBaseCallsWriter.cpp.o libblasr.so.5.3.3.p/hdf_HDFBaxWriter.cpp.o libblasr.so.5.3.3.p/hdf_HDFCmpExperimentGroup.cpp.o libblasr.so.5.3.3.p/hdf_HDFCmpSupportedFields.cpp.o libblasr.so.5.3.3.p/hdf_HDFData.cpp.o libblasr.so.5.3.3.p/hdf_HDFFile.cpp.o libblasr.so.5.3.3.p/hdf_HDFGroup.cpp.o libblasr.so.5.3.3.p/hdf_HDFNewBasReader.cpp.o libblasr.so.5.3.3.p/hdf_HDFPulseCallsWriter.cpp.o libblasr.so.5.3.3.p/hdf_HDFPulseDataFile.cpp.o libblasr.so.5.3.3.p/hdf_HDFPulseH5Writer.cpp.o libblasr.so.5.3.3.p/hdf_HDFPulseWriter.cpp.o libblasr.so.5.3.3.p/hdf_HDFRegionsWriter.cpp.o libblasr.so.5.3.3.p/hdf_HDFRegionTableReader.cpp.o libblasr.so.5.3.3.p/hdf_HDFScanDataReader.cpp.o libblasr.so.5.3.3.p/hdf_HDFScanDataWriter.cpp.o libblasr.so.5.3.3.p/hdf_HDFUtils.cpp.o libblasr.so.5.3.3.p/hdf_HDFWriterBase.cpp.o libblasr.so.5.3.3.p/hdf_HDFZMWMetricsWriter.cpp.o libblasr.so.5.3.3.p/hdf_HDFZMWReader.cpp.o libblasr.so.5.3.3.p/hdf_HDFZMWWriter.cpp.o libblasr.so.5.3.3.p/alignment_algorithms_alignment_sdp_SDPFragment.cpp.o libblasr.so.5.3.3.p/alignment_algorithms_alignment_sdp_SparseDynamicProgramming.cpp.o libblasr.so.5.3.3.p/alignment_algorithms_alignment_AlignmentUtils.cpp.o libblasr.so.5.3.3.p/alignment_algorithms_alignment_BaseScoreFunction.cpp.o libblasr.so.5.3.3.p/alignment_algorithms_alignment_ExtendAlign.cpp.o libblasr.so.5.3.3.p/alignment_algorithms_alignment_GuidedAlign.cpp.o libblasr.so.5.3.3.p/alignment_algorithms_alignment_IDSScoreFunction.cpp.o libblasr.so.5.3.3.p/alignment_algorithms_alignment_KBandAlign.cpp.o libblasr.so.5.3.3.p/alignment_algorithms_alignment_QualityValueScoreFunction.cpp.o libblasr.so.5.3.3.p/alignment_algorithms_alignment_ScoreMatrices.cpp.o libblasr.so.5.3.3.p/alignment_algorithms_alignment_StringToScoreMatrix.cpp.o libblasr.so.5.3.3.p/alignment_algorithms_anchoring_BWTSearch.cpp.o libblasr.so.5.3.3.p/alignment_algorithms_anchoring_ClusterProbability.cpp.o libblasr.so.5.3.3.p/alignment_algorithms_anchoring_Coordinate.cpp.o libblasr.so.5.3.3.p/alignment_algorithms_anchoring_FindMaxInterval.cpp.o libblasr.so.5.3.3.p/alignment_algorithms_sorting_DifferenceCovers.cpp.o libblasr.so.5.3.3.p/alignment_algorithms_sorting_LightweightSuffixArray.cpp.o libblasr.so.5.3.3.p/alignment_algorithms_sorting_MultikeyQuicksort.cpp.o libblasr.so.5.3.3.p/alignment_algorithms_sorting_qsufsort.cpp.o libblasr.so.5.3.3.p/alignment_datastructures_alignment_AlignmentCandidate.cpp.o libblasr.so.5.3.3.p/alignment_datastructures_alignment_AlignmentContext.cpp.o libblasr.so.5.3.3.p/alignment_datastructures_alignment_Alignment.cpp.o libblasr.so.5.3.3.p/alignment_datastructures_alignment_AlignmentMap.cpp.o libblasr.so.5.3.3.p/alignment_datastructures_alignment_AlignmentStats.cpp.o libblasr.so.5.3.3.p/alignment_datastructures_alignment_CmpFile.cpp.o libblasr.so.5.3.3.p/alignment_datastructures_alignment_FilterCriteria.cpp.o libblasr.so.5.3.3.p/alignment_datastructures_alignment_SAMToAlignmentCandidateAdapter.cpp.o libblasr.so.5.3.3.p/alignment_datastructures_alignmentset_SAMQVConversion.cpp.o libblasr.so.5.3.3.p/alignment_datastructures_alignmentset_SAMSupplementalQVList.cpp.o libblasr.so.5.3.3.p/alignment_datastructures_anchoring_AnchorParameters.cpp.o libblasr.so.5.3.3.p/alignment_datastructures_anchoring_ClusterList.cpp.o libblasr.so.5.3.3.p/alignment_datastructures_anchoring_MatchPos.cpp.o libblasr.so.5.3.3.p/alignment_datastructures_anchoring_WeightedInterval.cpp.o libblasr.so.5.3.3.p/alignment_files_BaseSequenceIO.cpp.o libblasr.so.5.3.3.p/alignment_files_CCSIterator.cpp.o libblasr.so.5.3.3.p/alignment_files_FragmentCCSIterator.cpp.o libblasr.so.5.3.3.p/alignment_files_ReaderAgglomerate.cpp.o libblasr.so.5.3.3.p/alignment_format_CompareSequencesPrinter.cpp.o libblasr.so.5.3.3.p/alignment_format_IntervalPrinter.cpp.o libblasr.so.5.3.3.p/alignment_format_SAMHeaderPrinter.cpp.o libblasr.so.5.3.3.p/alignment_format_SAMPrinter.cpp.o libblasr.so.5.3.3.p/alignment_format_SummaryPrinter.cpp.o libblasr.so.5.3.3.p/alignment_query_PbiFilterZmwGroupQuery.cpp.o libblasr.so.5.3.3.p/alignment_query_SequentialZmwGroupQuery.cpp.o libblasr.so.5.3.3.p/alignment_qvs_QualityValueProfile.cpp.o libblasr.so.5.3.3.p/alignment_simulator_ContextSample.cpp.o libblasr.so.5.3.3.p/alignment_simulator_ContextSet.cpp.o libblasr.so.5.3.3.p/alignment_simulator_LengthHistogram.cpp.o libblasr.so.5.3.3.p/alignment_simulator_QualitySample.cpp.o libblasr.so.5.3.3.p/alignment_statistics_cdfs.cpp.o libblasr.so.5.3.3.p/alignment_statistics_LookupAnchorDistribution.cpp.o libblasr.so.5.3.3.p/alignment_statistics_pdfs.cpp.o libblasr.so.5.3.3.p/alignment_statistics_StatUtils.cpp.o libblasr.so.5.3.3.p/alignment_tuples_BaseTuple.cpp.o libblasr.so.5.3.3.p/alignment_tuples_DNATuple.cpp.o libblasr.so.5.3.3.p/alignment_tuples_TupleMetrics.cpp.o libblasr.so.5.3.3.p/alignment_utils_BlasrFileUtils.cpp.o libblasr.so.5.3.3.p/alignment_utils_FileOfFileNames.cpp.o libblasr.so.5.3.3.p/alignment_utils_LogUtils.cpp.o libblasr.so.5.3.3.p/alignment_utils_PhredUtils.cpp.o libblasr.so.5.3.3.p/alignment_utils_RangeUtils.cpp.o libblasr.so.5.3.3.p/alignment_utils_RegionUtils.cpp.o libblasr.so.5.3.3.p/alignment_MappingMetrics.cpp.o libblasr.so.5.3.3.p/pbdata_alignment_CmpAlignment.cpp.o libblasr.so.5.3.3.p/pbdata_amos_AfgBasWriter.cpp.o libblasr.so.5.3.3.p/pbdata_loadpulses_MetricField.cpp.o libblasr.so.5.3.3.p/pbdata_loadpulses_MovieAlnIndexLookupTable.cpp.o libblasr.so.5.3.3.p/pbdata_metagenome_TitleTable.cpp.o libblasr.so.5.3.3.p/pbdata_qvs_BlasrQualityValue.cpp.o libblasr.so.5.3.3.p/pbdata_qvs_QualityTransform.cpp.o libblasr.so.5.3.3.p/pbdata_reads_AcqParams.cpp.o libblasr.so.5.3.3.p/pbdata_reads_BaseFile.cpp.o libblasr.so.5.3.3.p/pbdata_reads_HoleXY.cpp.o libblasr.so.5.3.3.p/pbdata_reads_PulseBaseCommon.cpp.o libblasr.so.5.3.3.p/pbdata_reads_PulseFile.cpp.o libblasr.so.5.3.3.p/pbdata_reads_ReadType.cpp.o libblasr.so.5.3.3.p/pbdata_reads_RegionAnnotation.cpp.o libblasr.so.5.3.3.p/pbdata_reads_RegionAnnotations.cpp.o libblasr.so.5.3.3.p/pbdata_reads_RegionTable.cpp.o libblasr.so.5.3.3.p/pbdata_reads_RegionTypeMap.cpp.o libblasr.so.5.3.3.p/pbdata_reads_ScanData.cpp.o libblasr.so.5.3.3.p/pbdata_reads_ZMWGroupEntry.cpp.o libblasr.so.5.3.3.p/pbdata_saf_AlnGroup.cpp.o libblasr.so.5.3.3.p/pbdata_saf_MovieInfo.cpp.o libblasr.so.5.3.3.p/pbdata_saf_RefGroup.cpp.o libblasr.so.5.3.3.p/pbdata_saf_RefInfo.cpp.o libblasr.so.5.3.3.p/pbdata_sam_ReadGroup.cpp.o libblasr.so.5.3.3.p/pbdata_sam_ReferenceSequence.cpp.o libblasr.so.5.3.3.p/pbdata_sam_SAMAlignment.cpp.o libblasr.so.5.3.3.p/pbdata_sam_SAMHeader.cpp.o libblasr.so.5.3.3.p/pbdata_sam_SAMKeywordValuePair.cpp.o libblasr.so.5.3.3.p/pbdata_utils_BitUtils.cpp.o libblasr.so.5.3.3.p/pbdata_utils_SMRTReadUtils.cpp.o libblasr.so.5.3.3.p/pbdata_utils_SMRTTitle.cpp.o libblasr.so.5.3.3.p/pbdata_utils_TimeUtils.cpp.o libblasr.so.5.3.3.p/pbdata_BlasrFASTAReader.cpp.o libblasr.so.5.3.3.p/pbdata_BlasrFASTQReader.cpp.o libblasr.so.5.3.3.p/pbdata_CCSSequence.cpp.o libblasr.so.5.3.3.p/pbdata_ChangeListID.cpp.o libblasr.so.5.3.3.p/pbdata_CommandLineParser.cpp.o libblasr.so.5.3.3.p/pbdata_DNASequence.cpp.o libblasr.so.5.3.3.p/pbdata_FASTASequence.cpp.o libblasr.so.5.3.3.p/pbdata_FASTQSequence.cpp.o libblasr.so.5.3.3.p/pbdata_GFFFile.cpp.o libblasr.so.5.3.3.p/pbdata_MD5Utils.cpp.o libblasr.so.5.3.3.p/pbdata_NucConversion.cpp.o libblasr.so.5.3.3.p/pbdata_PackedDNASequence.cpp.o libblasr.so.5.3.3.p/pbdata_ReverseCompressIndex.cpp.o libblasr.so.5.3.3.p/pbdata_SMRTSequence.cpp.o libblasr.so.5.3.3.p/pbdata_StringUtils.cpp.o -Wl,--as-needed -Wl,--no-undefined -shared -fPIC -Wl,--start-group -Wl,-soname,libblasr.so.5.3.3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,-z,relro -Wl,-z,now /usr/lib/aarch64-linux-gnu/libpbbam.so /usr/lib/aarch64-linux-gnu/libpbcopper.so /usr/lib/aarch64-linux-gnu/libz.so -lrt /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5_hl_cpp.so /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -Wl,--end-group [141/186] /usr/bin/meson --internal symbolextractor /<>/obj-aarch64-linux-gnu libblasr.so.5.3.3 libblasr.so.5.3.3 libblasr.so.5.3.3.p/libblasr.so.5.3.3.symbols --cross-host=linux [142/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_qvs_QualityValueVector_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_qvs_QualityValueVector_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_qvs_QualityValueVector_gtest.cpp.o -c ../unittest/pbdata/qvs/QualityValueVector_gtest.cpp [143/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_utils_SMRTTitle_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_utils_SMRTTitle_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_utils_SMRTTitle_gtest.cpp.o -c ../unittest/pbdata/utils/SMRTTitle_gtest.cpp [144/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/alignment_files_FragmentCCSIterator_gtest.cpp.o -MF unittest/libblasr_unittest.p/alignment_files_FragmentCCSIterator_gtest.cpp.o.d -o unittest/libblasr_unittest.p/alignment_files_FragmentCCSIterator_gtest.cpp.o -c ../unittest/alignment/files/FragmentCCSIterator_gtest.cpp [145/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/alignment_files_CCSIterator_gtest.cpp.o -MF unittest/libblasr_unittest.p/alignment_files_CCSIterator_gtest.cpp.o.d -o unittest/libblasr_unittest.p/alignment_files_CCSIterator_gtest.cpp.o -c ../unittest/alignment/files/CCSIterator_gtest.cpp [146/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/alignment_files_ReaderAgglomerate_gtest.cpp.o -MF unittest/libblasr_unittest.p/alignment_files_ReaderAgglomerate_gtest.cpp.o.d -o unittest/libblasr_unittest.p/alignment_files_ReaderAgglomerate_gtest.cpp.o -c ../unittest/alignment/files/ReaderAgglomerate_gtest.cpp [147/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/alignment_files_FragmentCCSIterator_other_gtest.cpp.o -MF unittest/libblasr_unittest.p/alignment_files_FragmentCCSIterator_other_gtest.cpp.o.d -o unittest/libblasr_unittest.p/alignment_files_FragmentCCSIterator_other_gtest.cpp.o -c ../unittest/alignment/files/FragmentCCSIterator_other_gtest.cpp [148/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/alignment_format_SAMPrinter_gtest.cpp.o -MF unittest/libblasr_unittest.p/alignment_format_SAMPrinter_gtest.cpp.o.d -o unittest/libblasr_unittest.p/alignment_format_SAMPrinter_gtest.cpp.o -c ../unittest/alignment/format/SAMPrinter_gtest.cpp [149/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/alignment_format_SAMHeaderPrinter_gtest.cpp.o -MF unittest/libblasr_unittest.p/alignment_format_SAMHeaderPrinter_gtest.cpp.o.d -o unittest/libblasr_unittest.p/alignment_format_SAMHeaderPrinter_gtest.cpp.o -c ../unittest/alignment/format/SAMHeaderPrinter_gtest.cpp [150/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/alignment_datastructures_alignment_CmpIndexedStringTable_gtest.cpp.o -MF unittest/libblasr_unittest.p/alignment_datastructures_alignment_CmpIndexedStringTable_gtest.cpp.o.d -o unittest/libblasr_unittest.p/alignment_datastructures_alignment_CmpIndexedStringTable_gtest.cpp.o -c ../unittest/alignment/datastructures/alignment/CmpIndexedStringTable_gtest.cpp [151/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/alignment_datastructures_alignment_AlignmentMap_gtest.cpp.o -MF unittest/libblasr_unittest.p/alignment_datastructures_alignment_AlignmentMap_gtest.cpp.o.d -o unittest/libblasr_unittest.p/alignment_datastructures_alignment_AlignmentMap_gtest.cpp.o -c ../unittest/alignment/datastructures/alignment/AlignmentMap_gtest.cpp [152/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/alignment_query_SequentialZmwGroupQuery_gtest.cpp.o -MF unittest/libblasr_unittest.p/alignment_query_SequentialZmwGroupQuery_gtest.cpp.o.d -o unittest/libblasr_unittest.p/alignment_query_SequentialZmwGroupQuery_gtest.cpp.o -c ../unittest/alignment/query/SequentialZmwGroupQuery_gtest.cpp [153/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/alignment_query_PbiFilterZmwGroupQuery_gtest.cpp.o -MF unittest/libblasr_unittest.p/alignment_query_PbiFilterZmwGroupQuery_gtest.cpp.o.d -o unittest/libblasr_unittest.p/alignment_query_PbiFilterZmwGroupQuery_gtest.cpp.o -c ../unittest/alignment/query/PbiFilterZmwGroupQuery_gtest.cpp [154/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/alignment_utils_FileUtils_gtest.cpp.o -MF unittest/libblasr_unittest.p/alignment_utils_FileUtils_gtest.cpp.o.d -o unittest/libblasr_unittest.p/alignment_utils_FileUtils_gtest.cpp.o -c ../unittest/alignment/utils/FileUtils_gtest.cpp [155/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/alignment_utils_RangeUtils_gtest.cpp.o -MF unittest/libblasr_unittest.p/alignment_utils_RangeUtils_gtest.cpp.o.d -o unittest/libblasr_unittest.p/alignment_utils_RangeUtils_gtest.cpp.o -c ../unittest/alignment/utils/RangeUtils_gtest.cpp [156/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/alignment_utils_RegionUtils_gtest.cpp.o -MF unittest/libblasr_unittest.p/alignment_utils_RegionUtils_gtest.cpp.o.d -o unittest/libblasr_unittest.p/alignment_utils_RegionUtils_gtest.cpp.o -c ../unittest/alignment/utils/RegionUtils_gtest.cpp [157/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/hdf_HDFScanDataWriter_gtest.cpp.o -MF unittest/libblasr_unittest.p/hdf_HDFScanDataWriter_gtest.cpp.o.d -o unittest/libblasr_unittest.p/hdf_HDFScanDataWriter_gtest.cpp.o -c ../unittest/hdf/HDFScanDataWriter_gtest.cpp [158/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/hdf_HDFCCSReader_gtest.cpp.o -MF unittest/libblasr_unittest.p/hdf_HDFCCSReader_gtest.cpp.o.d -o unittest/libblasr_unittest.p/hdf_HDFCCSReader_gtest.cpp.o -c ../unittest/hdf/HDFCCSReader_gtest.cpp [159/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/hdf_HDFZMWReader_gtest.cpp.o -MF unittest/libblasr_unittest.p/hdf_HDFZMWReader_gtest.cpp.o.d -o unittest/libblasr_unittest.p/hdf_HDFZMWReader_gtest.cpp.o -c ../unittest/hdf/HDFZMWReader_gtest.cpp [160/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/hdf_HDFPlsReader_gtest.cpp.o -MF unittest/libblasr_unittest.p/hdf_HDFPlsReader_gtest.cpp.o.d -o unittest/libblasr_unittest.p/hdf_HDFPlsReader_gtest.cpp.o -c ../unittest/hdf/HDFPlsReader_gtest.cpp [161/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/hdf_HDF2DArray_gtest.cpp.o -MF unittest/libblasr_unittest.p/hdf_HDF2DArray_gtest.cpp.o.d -o unittest/libblasr_unittest.p/hdf_HDF2DArray_gtest.cpp.o -c ../unittest/hdf/HDF2DArray_gtest.cpp [162/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/hdf_HDFUtils_gtest.cpp.o -MF unittest/libblasr_unittest.p/hdf_HDFUtils_gtest.cpp.o.d -o unittest/libblasr_unittest.p/hdf_HDFUtils_gtest.cpp.o -c ../unittest/hdf/HDFUtils_gtest.cpp [163/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/hdf_HDFBasReader_gtest.cpp.o -MF unittest/libblasr_unittest.p/hdf_HDFBasReader_gtest.cpp.o.d -o unittest/libblasr_unittest.p/hdf_HDFBasReader_gtest.cpp.o -c ../unittest/hdf/HDFBasReader_gtest.cpp [164/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/hdf_HDFScanDataReader_gtest.cpp.o -MF unittest/libblasr_unittest.p/hdf_HDFScanDataReader_gtest.cpp.o.d -o unittest/libblasr_unittest.p/hdf_HDFScanDataReader_gtest.cpp.o -c ../unittest/hdf/HDFScanDataReader_gtest.cpp [165/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_metagenome_TitleTable_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_metagenome_TitleTable_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_metagenome_TitleTable_gtest.cpp.o -c ../unittest/pbdata/metagenome/TitleTable_gtest.cpp [166/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_saf_RefInfo_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_saf_RefInfo_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_saf_RefInfo_gtest.cpp.o -c ../unittest/pbdata/saf/RefInfo_gtest.cpp [167/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_saf_MovieInfo_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_saf_MovieInfo_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_saf_MovieInfo_gtest.cpp.o -c ../unittest/pbdata/saf/MovieInfo_gtest.cpp [168/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_saf_AlnGroup_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_saf_AlnGroup_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_saf_AlnGroup_gtest.cpp.o -c ../unittest/pbdata/saf/AlnGroup_gtest.cpp [169/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_reads_ReadType_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_reads_ReadType_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_reads_ReadType_gtest.cpp.o -c ../unittest/pbdata/reads/ReadType_gtest.cpp [170/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_reads_RegionAnnotations_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_reads_RegionAnnotations_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_reads_RegionAnnotations_gtest.cpp.o -c ../unittest/pbdata/reads/RegionAnnotations_gtest.cpp [171/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_ScanData_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_ScanData_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_ScanData_gtest.cpp.o -c ../unittest/pbdata/ScanData_gtest.cpp [172/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_StringUtils_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_StringUtils_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_StringUtils_gtest.cpp.o -c ../unittest/pbdata/StringUtils_gtest.cpp [173/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_SMRTSequence_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_SMRTSequence_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_SMRTSequence_gtest.cpp.o -c ../unittest/pbdata/SMRTSequence_gtest.cpp [174/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_NucConversion_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_NucConversion_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_NucConversion_gtest.cpp.o -c ../unittest/pbdata/NucConversion_gtest.cpp [175/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_VectorUtils_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_VectorUtils_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_VectorUtils_gtest.cpp.o -c ../unittest/pbdata/VectorUtils_gtest.cpp [176/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_defs_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_defs_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_defs_gtest.cpp.o -c ../unittest/pbdata/defs_gtest.cpp [177/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_FASTASequence_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_FASTASequence_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_FASTASequence_gtest.cpp.o -c ../unittest/pbdata/FASTASequence_gtest.cpp [178/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_ChangeListID_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_ChangeListID_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_ChangeListID_gtest.cpp.o -c ../unittest/pbdata/ChangeListID_gtest.cpp [179/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_FASTQReader_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_FASTQReader_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_FASTQReader_gtest.cpp.o -c ../unittest/pbdata/FASTQReader_gtest.cpp [180/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_SeqUtils_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_SeqUtils_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_SeqUtils_gtest.cpp.o -c ../unittest/pbdata/SeqUtils_gtest.cpp [181/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_CCSSequence_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_CCSSequence_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_CCSSequence_gtest.cpp.o -c ../unittest/pbdata/CCSSequence_gtest.cpp [182/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_utils_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_utils_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_utils_gtest.cpp.o -c ../unittest/pbdata/utils_gtest.cpp [183/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_FASTQSequence_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_FASTQSequence_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_FASTQSequence_gtest.cpp.o -c ../unittest/pbdata/FASTQSequence_gtest.cpp [184/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_DNASequence_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_DNASequence_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_DNASequence_gtest.cpp.o -c ../unittest/pbdata/DNASequence_gtest.cpp [185/186] /usr/bin/aarch64-linux-gnu-g++ -Iunittest/libblasr_unittest.p -Iunittest -I../unittest -I. -I.. -I/usr/include -I/usr/include/hdf5/serial -fdiagnostics-color=always -pipe -D_FILE_OFFSET_BITS=64 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,--start-group -lpthread -Wl,--end-group -DGTEST_HAS_PTHREAD=1 -DBOOST_ALL_NO_LIB -Wno-delete-non-virtual-dtor -Wno-unused-variable -Wno-non-virtual-dtor -MD -MQ unittest/libblasr_unittest.p/pbdata_FASTAReader_gtest.cpp.o -MF unittest/libblasr_unittest.p/pbdata_FASTAReader_gtest.cpp.o.d -o unittest/libblasr_unittest.p/pbdata_FASTAReader_gtest.cpp.o -c ../unittest/pbdata/FASTAReader_gtest.cpp [186/186] /usr/bin/aarch64-linux-gnu-g++ -o unittest/libblasr_unittest unittest/libblasr_unittest.p/alignment_files_FragmentCCSIterator_gtest.cpp.o unittest/libblasr_unittest.p/alignment_files_CCSIterator_gtest.cpp.o unittest/libblasr_unittest.p/alignment_files_ReaderAgglomerate_gtest.cpp.o unittest/libblasr_unittest.p/alignment_files_FragmentCCSIterator_other_gtest.cpp.o unittest/libblasr_unittest.p/alignment_format_SAMPrinter_gtest.cpp.o unittest/libblasr_unittest.p/alignment_format_SAMHeaderPrinter_gtest.cpp.o unittest/libblasr_unittest.p/alignment_datastructures_alignment_CmpIndexedStringTable_gtest.cpp.o unittest/libblasr_unittest.p/alignment_datastructures_alignment_AlignmentMap_gtest.cpp.o unittest/libblasr_unittest.p/alignment_query_SequentialZmwGroupQuery_gtest.cpp.o unittest/libblasr_unittest.p/alignment_query_PbiFilterZmwGroupQuery_gtest.cpp.o unittest/libblasr_unittest.p/alignment_utils_FileUtils_gtest.cpp.o unittest/libblasr_unittest.p/alignment_utils_RangeUtils_gtest.cpp.o unittest/libblasr_unittest.p/alignment_utils_RegionUtils_gtest.cpp.o unittest/libblasr_unittest.p/hdf_HDFScanDataWriter_gtest.cpp.o unittest/libblasr_unittest.p/hdf_HDFCCSReader_gtest.cpp.o unittest/libblasr_unittest.p/hdf_HDFZMWReader_gtest.cpp.o unittest/libblasr_unittest.p/hdf_HDFPlsReader_gtest.cpp.o unittest/libblasr_unittest.p/hdf_HDF2DArray_gtest.cpp.o unittest/libblasr_unittest.p/hdf_HDFUtils_gtest.cpp.o unittest/libblasr_unittest.p/hdf_HDFBasReader_gtest.cpp.o unittest/libblasr_unittest.p/hdf_HDFScanDataReader_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_metagenome_TitleTable_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_saf_RefInfo_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_saf_MovieInfo_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_saf_AlnGroup_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_utils_SMRTTitle_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_qvs_QualityValueVector_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_reads_RegionTypeMap_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_reads_ReadType_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_reads_RegionAnnotations_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_ScanData_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_StringUtils_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_SMRTSequence_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_NucConversion_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_VectorUtils_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_defs_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_FASTASequence_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_ChangeListID_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_FASTQReader_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_SeqUtils_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_CCSSequence_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_utils_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_FASTQSequence_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_DNASequence_gtest.cpp.o unittest/libblasr_unittest.p/pbdata_FASTAReader_gtest.cpp.o -Wl,--as-needed -Wl,--no-undefined -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++14 -Wl,-z,relro -Wl,-z,now -Wl,--start-group libblasr.so.5.3.3 /usr/lib/aarch64-linux-gnu/libpbbam.so /usr/lib/aarch64-linux-gnu/libpbcopper.so /usr/lib/aarch64-linux-gnu/libz.so -lrt /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5_hl_cpp.so /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/aarch64-linux-gnu/libgtest_main.a -lpthread /usr/lib/aarch64-linux-gnu/libgtest.a -Wl,--end-group '-Wl,-rpath,$ORIGIN/..' -Wl,-rpath-link,/<>/obj-aarch64-linux-gnu/ create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' mkdir -p debian/libpbdata-dev/usr/include/pbseq cp -r pbdata debian/libpbdata-dev/usr/include/pbseq/ mkdir -p debian/libpbihdf-dev/usr/include/pbseq/ cp -r hdf debian/libpbihdf-dev/usr/include/pbseq/ mkdir -p debian/libblasr-dev/usr/include/pbseq/ cp -r alignment debian/libblasr-dev/usr/include/pbseq/ find -L debian/*/usr/include/ -type f -regextype posix-egrep -not -regex '.*(hpp|h)$' -delete find debian/*/usr/include/ -name "*.mk" -delete dh_auto_install cd obj-aarch64-linux-gnu && DESTDIR=/<>/pbseqlib-5.3.3\+dfsg/debian/tmp LC_ALL=C.UTF-8 ninja install [0/1] Installing files. Installing libblasr.so.5.3.3 to /<>/debian/tmp/usr/lib/aarch64-linux-gnu Installing /<>/obj-aarch64-linux-gnu/LibBlasrConfig.h to /<>/debian/tmp/usr/include/libblasr Installing /<>/hdf/BufferedHDF2DArray.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/BufferedHDF2DArrayImpl.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/BufferedHDFArray.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/BufferedHDFArrayImpl.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/DatasetCollection.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/DatasetCollectionImpl.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDF2DArray.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFAlnGroupGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFAlnGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFAlnInfoGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFArray.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFAtom.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFAttributable.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFBaseCallsWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFBasReader.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFBasWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFBaxWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFCCSReader.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFCmpData.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFCmpExperimentGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFCmpFile.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFCmpReader.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFCmpRefAlignmentGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFCmpRootGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFCmpSupportedFields.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFCommonFG.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFConfig.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFData.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFFile.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFFileLogGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFMovieInfoGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFNewBasReader.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFPlsReader.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFPlsWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFPulseCallsWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFPulseDataFile.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFPulseWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFRefGroupGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFRefInfoGroup.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFRegionsWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFRegionTableReader.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFRegionTableWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFScanDataReader.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFScanDataWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFSentinalFile.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFSMRTSequenceReader.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFUtils.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFWriteBuffer.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFWriterBase.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFZMWMetricsWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFZMWReader.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/hdf/HDFZMWWriter.hpp to /<>/debian/tmp/usr/include/libblasr/hdf Installing /<>/alignment/algorithms/alignment/sdp/FragmentSort.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/sdp/FragmentSortImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/sdp/NonoverlappingSparseDynamicProgramming.h to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/sdp/SDPColumn.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/sdp/SDPFragment.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/sdp/SDPSet.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/sdp/SDPSetImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/sdp/SparseDynamicProgramming.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/sdp/SparseDynamicProgrammingImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/sdp/VariableLengthSDPFragment.h to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment/sdp Installing /<>/alignment/algorithms/alignment/AffineGuidedAlign.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/AffineKBandAlign.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/AlignmentFormats.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/AlignmentUtils.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/AlignmentUtilsImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/BaseScoreFunction.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/DistanceMatrixScoreFunction.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/DistanceMatrixScoreFunctionImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/ExtendAlign.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/FullQVAlign.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/GraphPaper.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/GraphPaperImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/GuidedAlign.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/IDSScoreFunction.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/KBandAlign.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/OneGapAlignment.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/QualityValueScoreFunction.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/ScoreMatrices.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/SDPAlign.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/SDPAlignImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/StringToScoreMatrix.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/SWAlign.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/alignment/SWAlignImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/alignment Installing /<>/alignment/algorithms/anchoring/BasicEndpoint.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/BasicEndpointImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/BWTSearch.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/BWTSearchImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/ClusterProbability.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/Coordinate.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/FindMaxInterval.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/FindMaxIntervalImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/GlobalChain.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/GlobalChainImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/LISPValue.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/LISPValueImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/LISPValueWeightor.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/LISPValueWeightorImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/LISQValueWeightor.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/LISSizeWeightor.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/LISSizeWeightorImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/LongestIncreasingSubsequence.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/LongestIncreasingSubsequenceImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/MapBySuffixArray.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/MapBySuffixArrayImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/PrioritySearchTree.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/PrioritySearchTreeImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/ScoreAnchors.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/anchoring/ScoreAnchorsImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/anchoring Installing /<>/alignment/algorithms/compare/CompareStrings.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/compare Installing /<>/alignment/algorithms/sorting/DifferenceCovers.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/sorting Installing /<>/alignment/algorithms/sorting/Karkkainen.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/sorting Installing /<>/alignment/algorithms/sorting/LightweightSuffixArray.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/sorting Installing /<>/alignment/algorithms/sorting/MultikeyQuicksort.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/sorting Installing /<>/alignment/algorithms/sorting/qsufsort.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/algorithms/sorting Installing /<>/alignment/bwt/BWT.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/bwt Installing /<>/alignment/bwt/Occ.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/bwt Installing /<>/alignment/bwt/PackedHash.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/bwt Installing /<>/alignment/bwt/Pos.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/bwt Installing /<>/alignment/datastructures/alignment/AlignedPair.h to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/AlignmentCandidate.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/AlignmentContext.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/AlignmentGapList.h to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/Alignment.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/AlignmentMap.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/AlignmentStats.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/ByteAlignment.h to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/CmpFile.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/CmpIndexedStringTable.h to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/CmpReadGroupTable.h to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/CmpRefSeqTable.h to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/FilterCriteria.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/Path.h to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignment/SAMToAlignmentCandidateAdapter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignment Installing /<>/alignment/datastructures/alignmentset/AlignmentSetToCmpH5Adapter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignmentset Installing /<>/alignment/datastructures/alignmentset/AlignmentSetToCmpH5AdapterImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignmentset Installing /<>/alignment/datastructures/alignmentset/SAMQVConversion.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignmentset Installing /<>/alignment/datastructures/alignmentset/SAMSupplementalQVList.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/alignmentset Installing /<>/alignment/datastructures/anchoring/AnchorParameters.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/anchoring Installing /<>/alignment/datastructures/anchoring/ClusterList.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/anchoring Installing /<>/alignment/datastructures/anchoring/MatchPos.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/anchoring Installing /<>/alignment/datastructures/anchoring/WeightedInterval.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/datastructures/anchoring Installing /<>/alignment/files/BaseSequenceIO.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/files Installing /<>/alignment/files/CCSIterator.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/files Installing /<>/alignment/files/FragmentCCSIterator.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/files Installing /<>/alignment/files/ReaderAgglomerate.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/files Installing /<>/alignment/files/ReaderAgglomerateImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/files Installing /<>/alignment/format/BAMPrinter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/BAMPrinterImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/CompareSequencesPrinter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/CompareSequencesPrinterImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/IntervalPrinter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/SAMHeaderPrinter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/SAMPrinter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/SAMPrinterImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/StickAlignmentPrinter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/SummaryPrinter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/VulgarPrinter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/format/XMLPrinter.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/format Installing /<>/alignment/ipc/SharedMemoryAllocator.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/ipc Installing /<>/alignment/query/PbiFilterZmwGroupQuery.h to /<>/debian/tmp/usr/include/libblasr/alignment/query Installing /<>/alignment/query/SequentialZmwGroupQuery.h to /<>/debian/tmp/usr/include/libblasr/alignment/query Installing /<>/alignment/qvs/QualityValueProfile.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/qvs Installing /<>/alignment/simulator/CDFMap.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/simulator/ContextOutputList.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/simulator/ContextSample.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/simulator/ContextSet.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/simulator/LengthHistogram.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/simulator/OutputList.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/simulator/OutputSample.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/simulator/OutputSampleList.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/simulator/OutputSampleListSet.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/simulator/QualitySample.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/simulator Installing /<>/alignment/statistics/AnchorDistributionTable.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/statistics Installing /<>/alignment/statistics/cdfs.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/statistics Installing /<>/alignment/statistics/LookupAnchorDistribution.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/statistics Installing /<>/alignment/statistics/pdfs.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/statistics Installing /<>/alignment/statistics/StatUtils.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/statistics Installing /<>/alignment/statistics/StatUtilsImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/statistics Installing /<>/alignment/statistics/VarianceAccumulator.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/statistics Installing /<>/alignment/statistics/VarianceAccumulatorImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/statistics Installing /<>/alignment/suffixarray/LCPTable.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/suffixarray Installing /<>/alignment/suffixarray/SharedSuffixArray.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/suffixarray Installing /<>/alignment/suffixarray/ssort.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/suffixarray Installing /<>/alignment/suffixarray/SuffixArray.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/suffixarray Installing /<>/alignment/suffixarray/SuffixArrayTypes.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/suffixarray Installing /<>/alignment/tuples/BaseTuple.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/CompressedDNATuple.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/CountedTuple.h to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/DNATuple.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/DNATupleImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/DNATupleList.h to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/HashedTupleList.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/HashedTupleListImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleCountTable.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleCountTableImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/tuple.h to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleList.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleListImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleMask.h to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleMatching.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleMatchingImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleMetrics.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleOperations.h to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/tuples/TupleTranslations.h to /<>/debian/tmp/usr/include/libblasr/alignment/tuples Installing /<>/alignment/utils/FileOfFileNames.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/utils Installing /<>/alignment/utils/FileUtils.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/utils Installing /<>/alignment/utils/LogUtils.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/utils Installing /<>/alignment/utils/PhredUtils.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/utils Installing /<>/alignment/utils/RangeUtils.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/utils Installing /<>/alignment/utils/RegionUtils.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/utils Installing /<>/alignment/utils/RegionUtilsImpl.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/utils Installing /<>/alignment/utils/SimpleXMLUtils.hpp to /<>/debian/tmp/usr/include/libblasr/alignment/utils Installing /<>/alignment/MappingMetrics.hpp to /<>/debian/tmp/usr/include/libblasr/alignment Installing /<>/pbdata/alignment/CmpAlignment.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/alignment Installing /<>/pbdata/alignment/CmpAlignmentImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/alignment Installing /<>/pbdata/amos/AfgBasWriter.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/amos Installing /<>/pbdata/loadpulses/MetricField.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/loadpulses Installing /<>/pbdata/loadpulses/MovieAlnIndexLookupTable.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/loadpulses Installing /<>/pbdata/matrix/FlatMatrix.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/matrix Installing /<>/pbdata/matrix/FlatMatrixImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/matrix Installing /<>/pbdata/matrix/Matrix.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/matrix Installing /<>/pbdata/matrix/MatrixImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/matrix Installing /<>/pbdata/metagenome/FindRandomSequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/metagenome Installing /<>/pbdata/metagenome/SequenceIndexDatabase.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/metagenome Installing /<>/pbdata/metagenome/SequenceIndexDatabaseImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/metagenome Installing /<>/pbdata/metagenome/TitleTable.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/metagenome Installing /<>/pbdata/qvs/QualityTransform.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/qvs Installing /<>/pbdata/qvs/QualityValue.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/qvs Installing /<>/pbdata/qvs/QualityValueVector.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/qvs Installing /<>/pbdata/qvs/QualityValueVectorImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/qvs Installing /<>/pbdata/qvs/QualityTransform.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/qvs Installing /<>/pbdata/qvs/QualityValue.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/qvs Installing /<>/pbdata/qvs/QualityValueVector.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/qvs Installing /<>/pbdata/qvs/QualityValueVectorImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/qvs Installing /<>/pbdata/reads/AcqParams.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/BaseFile.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/BaseFileImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/HoleXY.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/PulseBaseCommon.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/PulseFile.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/PulseFileImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/ReadInterval.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/ReadType.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/RegionAnnotation.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/RegionAnnotations.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/RegionTable.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/RegionTypeMap.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/ScanData.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/reads/ZMWGroupEntry.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/reads Installing /<>/pbdata/saf/AlnGroup.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/saf Installing /<>/pbdata/saf/AlnInfo.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/saf Installing /<>/pbdata/saf/MovieInfo.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/saf Installing /<>/pbdata/saf/RefGroup.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/saf Installing /<>/pbdata/saf/RefInfo.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/saf Installing /<>/pbdata/sam/AlignmentSet.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/AlignmentSetImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/CigarString.h to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/ReadGroup.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/ReferenceSequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/SAMAlignment.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/SAMFlag.h to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/SAMHeader.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/SAMKeywordValuePair.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/SAMKeywordValuePairImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/SAMReader.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/sam/SAMReaderImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/sam Installing /<>/pbdata/utils/BitUtils.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/utils Installing /<>/pbdata/utils/SMRTReadUtils.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/utils Installing /<>/pbdata/utils/SMRTTitle.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/utils Installing /<>/pbdata/utils/TimeUtils.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata/utils Installing /<>/pbdata/CCSSequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/ChangeListID.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/CommandLineParser.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/Compare4BitCompressed.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/CompressedDNASequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/CompressedSequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/CompressedSequenceImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/defs.h to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/DNASequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/Enumerations.h to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/FASTAReader.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/FASTASequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/FASTQReader.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/FASTQSequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/GFFFile.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/MD5Utils.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/MD5UtilsImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/NucConversion.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/PacBioDefs.h to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/PackedDNASequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/PrettyException.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/ReverseCompressIndex.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/SeqUtils.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/SeqUtilsImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/SMRTSequence.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/StringUtils.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/Types.h to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/utils.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/utilsImpl.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/pbdata/VectorUtils.hpp to /<>/debian/tmp/usr/include/libblasr/pbdata Installing /<>/obj-aarch64-linux-gnu/meson-private/libblasr.pc to /<>/debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig make[1]: Leaving directory '/<>' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_missing: warning: usr/include/libblasr/alignment/MappingMetrics.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/AffineGuidedAlign.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/AffineKBandAlign.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/AlignmentFormats.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/AlignmentUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/AlignmentUtilsImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/BaseScoreFunction.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/DistanceMatrixScoreFunction.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/DistanceMatrixScoreFunctionImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/ExtendAlign.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/FullQVAlign.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/GraphPaper.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/GraphPaperImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/GuidedAlign.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/IDSScoreFunction.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/KBandAlign.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/OneGapAlignment.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/QualityValueScoreFunction.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/SDPAlign.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/SDPAlignImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/SWAlign.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/SWAlignImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/ScoreMatrices.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/StringToScoreMatrix.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/FragmentSort.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/FragmentSortImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/NonoverlappingSparseDynamicProgramming.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/SDPColumn.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/SDPFragment.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/SDPSet.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/SDPSetImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/SparseDynamicProgramming.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/SparseDynamicProgrammingImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/alignment/sdp/VariableLengthSDPFragment.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/BWTSearch.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/BWTSearchImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/BasicEndpoint.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/BasicEndpointImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/ClusterProbability.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/Coordinate.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/FindMaxInterval.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/FindMaxIntervalImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/GlobalChain.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/GlobalChainImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/LISPValue.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/LISPValueImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/LISPValueWeightor.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/LISPValueWeightorImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/LISQValueWeightor.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/LISSizeWeightor.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/LISSizeWeightorImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/LongestIncreasingSubsequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/LongestIncreasingSubsequenceImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/MapBySuffixArray.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/MapBySuffixArrayImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/PrioritySearchTree.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/PrioritySearchTreeImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/ScoreAnchors.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/anchoring/ScoreAnchorsImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/compare/CompareStrings.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/sorting/DifferenceCovers.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/sorting/Karkkainen.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/sorting/LightweightSuffixArray.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/sorting/MultikeyQuicksort.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/algorithms/sorting/qsufsort.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/bwt/BWT.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/bwt/Occ.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/bwt/PackedHash.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/bwt/Pos.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/AlignedPair.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/Alignment.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/AlignmentCandidate.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/AlignmentContext.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/AlignmentGapList.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/AlignmentMap.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/AlignmentStats.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/ByteAlignment.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/CmpFile.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/CmpIndexedStringTable.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/CmpReadGroupTable.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/CmpRefSeqTable.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/FilterCriteria.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/Path.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignment/SAMToAlignmentCandidateAdapter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignmentset/AlignmentSetToCmpH5Adapter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignmentset/AlignmentSetToCmpH5AdapterImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignmentset/SAMQVConversion.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/alignmentset/SAMSupplementalQVList.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/anchoring/AnchorParameters.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/anchoring/ClusterList.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/anchoring/MatchPos.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/datastructures/anchoring/WeightedInterval.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/files/BaseSequenceIO.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/files/CCSIterator.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/files/FragmentCCSIterator.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/files/ReaderAgglomerate.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/files/ReaderAgglomerateImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/BAMPrinter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/BAMPrinterImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/CompareSequencesPrinter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/CompareSequencesPrinterImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/IntervalPrinter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/SAMHeaderPrinter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/SAMPrinter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/SAMPrinterImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/StickAlignmentPrinter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/SummaryPrinter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/VulgarPrinter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/format/XMLPrinter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/ipc/SharedMemoryAllocator.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/query/PbiFilterZmwGroupQuery.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/query/SequentialZmwGroupQuery.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/qvs/QualityValueProfile.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/CDFMap.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/ContextOutputList.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/ContextSample.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/ContextSet.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/LengthHistogram.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/OutputList.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/OutputSample.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/OutputSampleList.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/OutputSampleListSet.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/simulator/QualitySample.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/statistics/AnchorDistributionTable.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/statistics/LookupAnchorDistribution.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/statistics/StatUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/statistics/StatUtilsImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/statistics/VarianceAccumulator.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/statistics/VarianceAccumulatorImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/statistics/cdfs.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/statistics/pdfs.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/suffixarray/LCPTable.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/suffixarray/SharedSuffixArray.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/suffixarray/SuffixArray.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/suffixarray/SuffixArrayTypes.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/suffixarray/ssort.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/BaseTuple.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/CompressedDNATuple.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/CountedTuple.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/DNATuple.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/DNATupleImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/DNATupleList.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/HashedTupleList.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/HashedTupleListImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleCountTable.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleCountTableImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleList.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleListImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleMask.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleMatching.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleMatchingImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleMetrics.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleOperations.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/TupleTranslations.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/tuples/tuple.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/utils/FileOfFileNames.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/utils/FileUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/utils/LogUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/utils/PhredUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/utils/RangeUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/utils/RegionUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/utils/RegionUtilsImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/alignment/utils/SimpleXMLUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/BufferedHDF2DArray.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/BufferedHDF2DArrayImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/BufferedHDFArray.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/BufferedHDFArrayImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/DatasetCollection.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/DatasetCollectionImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDF2DArray.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFAlnGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFAlnGroupGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFAlnInfoGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFArray.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFAtom.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFAttributable.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFBasReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFBasWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFBaseCallsWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFBaxWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFCCSReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFCmpData.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFCmpExperimentGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFCmpFile.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFCmpReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFCmpRefAlignmentGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFCmpRootGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFCmpSupportedFields.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFCommonFG.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFConfig.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFData.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFFile.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFFileLogGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFMovieInfoGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFNewBasReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFPlsReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFPlsWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFPulseCallsWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFPulseDataFile.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFPulseWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFRefGroupGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFRefInfoGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFRegionTableReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFRegionTableWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFRegionsWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFSMRTSequenceReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFScanDataReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFScanDataWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFSentinalFile.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFWriteBuffer.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFWriterBase.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFZMWMetricsWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFZMWReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/hdf/HDFZMWWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/CCSSequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/ChangeListID.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/CommandLineParser.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/Compare4BitCompressed.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/CompressedDNASequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/CompressedSequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/CompressedSequenceImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/DNASequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/Enumerations.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/FASTAReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/FASTASequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/FASTQReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/FASTQSequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/GFFFile.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/MD5Utils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/MD5UtilsImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/NucConversion.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/PacBioDefs.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/PackedDNASequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/PrettyException.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/ReverseCompressIndex.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/SMRTSequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/SeqUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/SeqUtilsImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/StringUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/Types.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/VectorUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/alignment/CmpAlignment.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/alignment/CmpAlignmentImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/amos/AfgBasWriter.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/defs.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/loadpulses/MetricField.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/loadpulses/MovieAlnIndexLookupTable.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/matrix/FlatMatrix.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/matrix/FlatMatrixImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/matrix/Matrix.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/matrix/MatrixImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/metagenome/FindRandomSequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/metagenome/SequenceIndexDatabase.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/metagenome/SequenceIndexDatabaseImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/metagenome/TitleTable.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/qvs/QualityTransform.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/qvs/QualityValue.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/qvs/QualityValueVector.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/qvs/QualityValueVectorImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/AcqParams.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/BaseFile.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/BaseFileImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/HoleXY.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/PulseBaseCommon.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/PulseFile.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/PulseFileImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/ReadInterval.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/ReadType.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/RegionAnnotation.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/RegionAnnotations.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/RegionTable.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/RegionTypeMap.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/ScanData.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/reads/ZMWGroupEntry.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/saf/AlnGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/saf/AlnInfo.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/saf/MovieInfo.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/saf/RefGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/saf/RefInfo.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/AlignmentSet.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/AlignmentSetImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/CigarString.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/ReadGroup.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/ReferenceSequence.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/SAMAlignment.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/SAMFlag.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/SAMHeader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/SAMKeywordValuePair.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/SAMKeywordValuePairImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/SAMReader.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/sam/SAMReaderImpl.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/utils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/utils/BitUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/utils/SMRTReadUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/utils/SMRTTitle.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/utils/TimeUtils.hpp exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/libblasr/pbdata/utilsImpl.hpp exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: libblasr (1), libblasr-dev (3), libpbdata-dev (0), libpbihdf-dev (0), libpbseq (0), libpbseq-dev (0) * dh_installdocs: libblasr (0), libblasr-dev (0), libpbdata-dev (0), libpbihdf-dev (0), libpbseq (0), libpbseq-dev (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'libpbseq-dev' in '../libpbseq-dev_5.3.3+dfsg-4_arm64.deb'. dpkg-deb: building package 'libblasr-dev' in '../libblasr-dev_5.3.3+dfsg-4_arm64.deb'. dpkg-deb: building package 'libblasr' in '../libblasr_5.3.3+dfsg-4_arm64.deb'. dpkg-deb: building package 'libblasr-dbgsym' in '../libblasr-dbgsym_5.3.3+dfsg-4_arm64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../pbseqlib_5.3.3+dfsg-4_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-09-25T20:43:27Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ pbseqlib_5.3.3+dfsg-4_arm64.changes: ------------------------------------ Format: 1.8 Date: Wed, 29 Jan 2020 15:28:50 +0100 Source: pbseqlib Binary: libblasr libblasr-dbgsym libblasr-dev libpbseq-dev Built-For-Profiles: cross nocheck Architecture: arm64 Version: 5.3.3+dfsg-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: libblasr - tools for aligning PacBio reads to target sequences libblasr-dev - tools for aligning PacBio reads to target sequences (development libpbseq-dev - library for analyzing PacBio sequencing data (development files) Closes: 950093 Changes: pbseqlib (5.3.3+dfsg-4) unstable; urgency=medium . * Breaks+Replaces: libblasr (<< 5.3.3) Closes: #950093 Checksums-Sha1: 9364ebe27279bb63a4c3e490192c8e56f46208b9 8137984 libblasr-dbgsym_5.3.3+dfsg-4_arm64.deb b898bbf6384a5b827da6368eb3f81be1a4dcc4e9 782524 libblasr-dev_5.3.3+dfsg-4_arm64.deb 19680d7a5a549a41f5f99d7e254c8aacdffd3c12 1040124 libblasr_5.3.3+dfsg-4_arm64.deb 5a045cc0be479a68dabfc7e503b0fc331915a42a 5024 libpbseq-dev_5.3.3+dfsg-4_arm64.deb 7a56be6ced52f275f78063f1a25bdca56f583af3 7536 pbseqlib_5.3.3+dfsg-4_arm64.buildinfo Checksums-Sha256: 5ba8c7afd1f26148f0a6b98ec08ecfae3a27d8f1f6a6abaa26d6b8d4c7c00cdc 8137984 libblasr-dbgsym_5.3.3+dfsg-4_arm64.deb e040133bdbb11c555fe8bc904f8a93cec4e5ee280bc77a648ff2a5fd7deabbdf 782524 libblasr-dev_5.3.3+dfsg-4_arm64.deb fc1772df8135c77b22f43c433cb42e90cfb421604a7c76552e1c4028a893f998 1040124 libblasr_5.3.3+dfsg-4_arm64.deb 936a0f11b82c3b0d4cf7fde3bfacee38c318fb5f45870abd742f1b978d87a2a8 5024 libpbseq-dev_5.3.3+dfsg-4_arm64.deb b60fdd7a117e78712f2dc711a899c1c9892963b7ef9e0e57ba9cd0aa1015aa4b 7536 pbseqlib_5.3.3+dfsg-4_arm64.buildinfo Files: f41cebe7fa7659b8979c7c911271301d 8137984 debug optional libblasr-dbgsym_5.3.3+dfsg-4_arm64.deb 3ad90e156212176fd32ffeb71dccf40e 782524 libdevel optional libblasr-dev_5.3.3+dfsg-4_arm64.deb 2f39023205e08d8b9bd8275c4ace1193 1040124 libs optional libblasr_5.3.3+dfsg-4_arm64.deb 7995cafc802ed4790f45d4989d813700 5024 libdevel optional libpbseq-dev_5.3.3+dfsg-4_arm64.deb 8b185c5e07c261f498188378c23e46c6 7536 libs optional pbseqlib_5.3.3+dfsg-4_arm64.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: pbseqlib Binary: libblasr libblasr-dbgsym libblasr-dev libpbseq-dev Architecture: arm64 Version: 5.3.3+dfsg-4 Checksums-Md5: f41cebe7fa7659b8979c7c911271301d 8137984 libblasr-dbgsym_5.3.3+dfsg-4_arm64.deb 3ad90e156212176fd32ffeb71dccf40e 782524 libblasr-dev_5.3.3+dfsg-4_arm64.deb 2f39023205e08d8b9bd8275c4ace1193 1040124 libblasr_5.3.3+dfsg-4_arm64.deb 7995cafc802ed4790f45d4989d813700 5024 libpbseq-dev_5.3.3+dfsg-4_arm64.deb Checksums-Sha1: 9364ebe27279bb63a4c3e490192c8e56f46208b9 8137984 libblasr-dbgsym_5.3.3+dfsg-4_arm64.deb b898bbf6384a5b827da6368eb3f81be1a4dcc4e9 782524 libblasr-dev_5.3.3+dfsg-4_arm64.deb 19680d7a5a549a41f5f99d7e254c8aacdffd3c12 1040124 libblasr_5.3.3+dfsg-4_arm64.deb 5a045cc0be479a68dabfc7e503b0fc331915a42a 5024 libpbseq-dev_5.3.3+dfsg-4_arm64.deb Checksums-Sha256: 5ba8c7afd1f26148f0a6b98ec08ecfae3a27d8f1f6a6abaa26d6b8d4c7c00cdc 8137984 libblasr-dbgsym_5.3.3+dfsg-4_arm64.deb e040133bdbb11c555fe8bc904f8a93cec4e5ee280bc77a648ff2a5fd7deabbdf 782524 libblasr-dev_5.3.3+dfsg-4_arm64.deb fc1772df8135c77b22f43c433cb42e90cfb421604a7c76552e1c4028a893f998 1040124 libblasr_5.3.3+dfsg-4_arm64.deb 936a0f11b82c3b0d4cf7fde3bfacee38c318fb5f45870abd742f1b978d87a2a8 5024 libpbseq-dev_5.3.3+dfsg-4_arm64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Fri, 25 Sep 2020 20:43:26 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11.1), automake (= 1:1.16.2-4), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-7), binutils (= 2.35.1-1), binutils-common (= 2.35.1-1), binutils-x86-64-linux-gnu (= 2.35.1-1), bsdextrautils (= 2.36-3+b1), bsdutils (= 1:2.36-3+b1), build-essential (= 12.8), bzip2 (= 1.0.8-4), cmake (= 3.18.2-1), cmake-data (= 3.18.2-1), coreutils (= 8.32-4+b1), cpp (= 4:10.2.0-1), cpp-10 (= 10.2.0-9), dash (= 0.5.10.2-7), debconf (= 1.5.74), debhelper (= 13.2.1), debianutils (= 4.11.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.9.0-1), diffutils (= 1:3.7-3), dpkg (= 1.20.5), dpkg-dev (= 1.20.5), dwz (= 0.13-5), file (= 1:5.38-5), findutils (= 4.7.0-1), g++ (= 4:10.2.0-1), g++-10 (= 10.2.0-9), gcc (= 4:10.2.0-1), gcc-10 (= 10.2.0-9), gcc-10-base (= 10.2.0-9), gcc-9-base (= 9.3.0-18), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), googletest (= 1.10.0-3), grep (= 3.4-1), groff-base (= 1.22.4-5), gzip (= 1.10-2), hdf5-helpers (= 1.10.6+repack-2), hostname (= 3.23), init-system-helpers (= 1.58), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libaec-dev (= 1.0.4-1), libaec0 (= 1.0.4-1), libarchive-zip-perl (= 1.68-1), libarchive13 (= 3.4.3-2), libasan5 (= 9.3.0-18), libasan6 (= 10.2.0-9), libatomic1 (= 10.2.0-9), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3), libaudit1 (= 1:2.8.5-3+b1), libbinutils (= 2.35.1-1), libblkid1 (= 2.36-3+b1), libboost-dev (= 1.71.0.3), libboost1.71-dev (= 1.71.0-6+b2), libbrotli1 (= 1.0.9-2), libbz2-1.0 (= 1.0.8-4), libc-bin (= 2.31-3), libc-dev-bin (= 2.31-3), libc6 (= 2.31-3), libc6-dev (= 2.31-3), libcap-ng0 (= 0.7.9-2.2), libcc1-0 (= 10.2.0-9), libcom-err2 (= 1.45.6-1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.17-1), libcrypt1 (= 1:4.4.17-1), libctf-nobfd0 (= 2.35.1-1), libctf0 (= 2.35.1-1), libcurl3-gnutls (= 7.72.0-1), libcurl4 (= 7.72.0-1), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.254), libdebhelper-perl (= 13.2.1), libdeflate0 (= 1.6-1), libdpkg-perl (= 1.20.5), libelf1 (= 0.181-1), libexpat1 (= 2.2.9-1), libffi7 (= 3.3-4), libfile-stripnondeterminism-perl (= 1.9.0-1), libgcc-10-dev (= 10.2.0-9), libgcc-9-dev (= 9.3.0-18), libgcc-s1 (= 10.2.0-9), libgcrypt20 (= 1.8.6-2), libgdbm-compat4 (= 1.18.1-5.1), libgdbm6 (= 1.18.1-5.1), libgfortran5 (= 10.2.0-9), libglib2.0-0 (= 2.66.0-2), libgmp10 (= 2:6.2.0+dfsg-6), libgnutls30 (= 3.6.15-4), libgomp1 (= 10.2.0-9), libgpg-error0 (= 1.38-2), libgssapi-krb5-2 (= 1.17-10), libgtest-dev (= 1.10.0-3), libhdf5-103-1 (= 1.10.6+repack-2), libhdf5-cpp-103-1 (= 1.10.6+repack-2), libhdf5-dev (= 1.10.6+repack-2), libhdf5-fortran-102 (= 1.10.6+repack-2), libhdf5-hl-100 (= 1.10.6+repack-2), libhdf5-hl-cpp-100 (= 1.10.6+repack-2), libhdf5-hl-fortran-100 (= 1.10.6+repack-2), libhogweed6 (= 3.6-2), libhts-dev (= 1.10.2-5), libhts3 (= 1.10.2-5), libicu67 (= 67.1-4), libidn2-0 (= 2.3.0-1), libisl22 (= 0.22.1-1), libitm1 (= 10.2.0-9), libjpeg62-turbo (= 1:2.0.5-1.1), libjpeg62-turbo-dev (= 1:2.0.5-1.1), libjsoncpp1 (= 1.7.4-3.1), libk5crypto3 (= 1.17-10), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.17-10), libkrb5support0 (= 1.17-10), libldap-2.4-2 (= 2.4.53+dfsg-1), liblsan0 (= 10.2.0-9), liblz4-1 (= 1.9.2-2), liblzma-dev (= 5.2.4-1+b1), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-5), libmagic1 (= 1:5.38-5), libmount1 (= 2.36-3+b1), libmpc3 (= 1.2.0-1), libmpfr6 (= 4.1.0-3), libncurses6 (= 6.2+20200918-1), libncursesw6 (= 6.2+20200918-1), libnettle8 (= 3.6-2), libnghttp2-14 (= 1.41.0-3), libp11-kit0 (= 0.23.21-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpbbam-dev (= 1.3.0+dfsg-2), libpbbam1.3.0 (= 1.3.0+dfsg-2), libpbcopper-dev (= 1.6.0+dfsg-4+b1), libpbcopper1.6.0 (= 1.6.0+dfsg-4+b1), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-13), libperl5.30 (= 5.30.3-4), libpipeline1 (= 1.5.3-1), libprocps8 (= 2:3.3.16-5), libpsl5 (= 0.21.0-1.1), libpython3-stdlib (= 3.8.2-3), libpython3.8-minimal (= 3.8.6-1), libpython3.8-stdlib (= 3.8.6-1), libquadmath0 (= 10.2.0-9), libreadline8 (= 8.0-4), librhash0 (= 1.4.0-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2), libsasl2-2 (= 2.1.27+dfsg-2), libsasl2-modules-db (= 2.1.27+dfsg-2), libseccomp2 (= 2.4.4-1), libselinux1 (= 3.1-2), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.36-3+b1), libsqlite3-0 (= 3.33.0-1), libssh2-1 (= 1.8.0-2.1), libssl-dev (= 1.1.1g-1), libssl1.1 (= 1.1.1g-1), libstdc++-10-dev (= 10.2.0-9), libstdc++-9-dev (= 9.3.0-18), libstdc++6 (= 10.2.0-9), libsub-override-perl (= 0.09-2), libsystemd0 (= 246.6-1), libsz2 (= 1.0.4-1), libtasn1-6 (= 4.16.0-2), libtinfo6 (= 6.2+20200918-1), libtool (= 2.4.6-14), libtsan0 (= 10.2.0-9), libubsan1 (= 10.2.0-9), libuchardet0 (= 0.0.7-1), libudev1 (= 246.6-1), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36-3+b1), libuv1 (= 1.39.0-1), libxml2 (= 2.9.10+dfsg-6), libzstd1 (= 1.4.5+dfsg-4), linux-libc-dev (= 5.8.10-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.3-4), man-db (= 2.9.3-2), mawk (= 1.3.4.20200120-2), meson (= 0.55.3-1), mime-support (= 3.64), ncurses-base (= 6.2+20200918-1), ncurses-bin (= 6.2+20200918-1), ninja-build (= 1.10.1-1), patch (= 2.7.6-6), perl (= 5.30.3-4), perl-base (= 5.30.3-4), perl-modules-5.30 (= 5.30.3-4), pkg-config (= 0.29.2-1), po-debconf (= 1.0.21), procps (= 2:3.3.16-5), python3 (= 3.8.2-3), python3-minimal (= 3.8.2-3), python3-pkg-resources (= 49.3.1-2), python3.8 (= 3.8.6-1), python3.8-minimal (= 3.8.6-1), readline-common (= 8.0-4), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-5), tar (= 1.30+dfsg-7), util-linux (= 2.36-3+b1), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1580308130" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libblasr-dbgsym_5.3.3+dfsg-4_arm64.deb -------------------------------------- new Debian package, version 2.0. size 8137984 bytes: control archive=544 bytes. 385 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: libblasr-dbgsym Source: pbseqlib Version: 5.3.3+dfsg-4 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 8356 Depends: libblasr (= 5.3.3+dfsg-4) Section: debug Priority: optional Description: debug symbols for libblasr Build-Ids: 6464dec90579f104347865f7699f2188a02cc6b9 drwxr-xr-x root/root 0 2020-01-29 14:28 ./ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/lib/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/lib/debug/.build-id/64/ -rw-r--r-- root/root 8546144 2020-01-29 14:28 ./usr/lib/debug/.build-id/64/64dec90579f104347865f7699f2188a02cc6b9.debug drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/share/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-01-29 14:28 ./usr/share/doc/libblasr-dbgsym -> libblasr libblasr-dev_5.3.3+dfsg-4_arm64.deb ----------------------------------- new Debian package, version 2.0. size 782524 bytes: control archive=5336 bytes. 793 bytes, 19 lines control 16152 bytes, 167 lines md5sums Package: libblasr-dev Source: pbseqlib Version: 5.3.3+dfsg-4 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 4210 Depends: libblasr (= 5.3.3+dfsg-4), libpbdata-dev (= 5.3.3+dfsg-4) Breaks: libblasr (<< 5.3.3) Replaces: libblasr (<< 5.3.3) Section: libdevel Priority: optional Homepage: https://github.com/PacificBiosciences/blasr_libcpp Description: tools for aligning PacBio reads to target sequences (development files) Blasr_libcpp is a library used by blasr and other executables such as samtoh5, loadPulses for analyzing PacBio sequences. This library contains three sub-libraries, including pbdata, hdf and alignment. . This package contains the header files and static library for the alignment sublibrary. drwxr-xr-x root/root 0 2020-01-29 14:28 ./ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/ -rw-r--r-- root/root 130 2020-01-29 14:28 ./usr/include/pbseq/LibBlasrConfig.h drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/ -rw-r--r-- root/root 2868 2020-01-29 14:28 ./usr/include/pbseq/alignment/MappingMetrics.hpp drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/ -rw-r--r-- root/root 21547 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/AffineGuidedAlign.hpp -rw-r--r-- root/root 14470 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/AffineKBandAlign.hpp -rw-r--r-- root/root 253 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/AlignmentFormats.hpp -rw-r--r-- root/root 5585 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/AlignmentUtils.hpp -rw-r--r-- root/root 18470 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/AlignmentUtilsImpl.hpp -rw-r--r-- root/root 446 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/BaseScoreFunction.hpp -rw-r--r-- root/root 1664 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/DistanceMatrixScoreFunction.hpp -rw-r--r-- root/root 4641 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/DistanceMatrixScoreFunctionImpl.hpp -rw-r--r-- root/root 14955 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/ExtendAlign.hpp -rw-r--r-- root/root 5694 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/FullQVAlign.hpp -rw-r--r-- root/root 737 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/GraphPaper.hpp -rw-r--r-- root/root 4795 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/GraphPaperImpl.hpp -rw-r--r-- root/root 21551 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/GuidedAlign.hpp -rw-r--r-- root/root 5922 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/IDSScoreFunction.hpp -rw-r--r-- root/root 12931 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/KBandAlign.hpp -rw-r--r-- root/root 12739 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/OneGapAlignment.hpp -rw-r--r-- root/root 2595 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/QualityValueScoreFunction.hpp -rw-r--r-- root/root 2536 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/SDPAlign.hpp -rw-r--r-- root/root 26297 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/SDPAlignImpl.hpp -rw-r--r-- root/root 508 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/SWAlign.hpp -rw-r--r-- root/root 15288 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/SWAlignImpl.hpp -rw-r--r-- root/root 378 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/ScoreMatrices.hpp -rw-r--r-- root/root 212 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/StringToScoreMatrix.hpp drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/sdp/ -rw-r--r-- root/root 432 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/sdp/FragmentSort.hpp -rw-r--r-- root/root 509 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/sdp/FragmentSortImpl.hpp -rw-r--r-- root/root 7162 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/sdp/NonoverlappingSparseDynamicProgramming.h -rw-r--r-- root/root 502 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/sdp/SDPColumn.hpp -rw-r--r-- root/root 2931 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/sdp/SDPFragment.hpp -rw-r--r-- root/root 1120 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/sdp/SDPSet.hpp -rw-r--r-- root/root 2262 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/sdp/SDPSetImpl.hpp -rw-r--r-- root/root 1377 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/sdp/SparseDynamicProgramming.hpp -rw-r--r-- root/root 10646 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/sdp/SparseDynamicProgrammingImpl.hpp -rw-r--r-- root/root 1000 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/alignment/sdp/VariableLengthSDPFragment.h drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/ -rw-r--r-- root/root 1097 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/BWTSearch.hpp -rw-r--r-- root/root 484 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/BWTSearchImpl.hpp -rw-r--r-- root/root 1601 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/BasicEndpoint.hpp -rw-r--r-- root/root 2371 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/BasicEndpointImpl.hpp -rw-r--r-- root/root 361 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/ClusterProbability.hpp -rw-r--r-- root/root 1194 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/Coordinate.hpp -rw-r--r-- root/root 5936 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/FindMaxInterval.hpp -rw-r--r-- root/root 33971 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/FindMaxIntervalImpl.hpp -rw-r--r-- root/root 1411 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/GlobalChain.hpp -rw-r--r-- root/root 7592 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/GlobalChainImpl.hpp -rw-r--r-- root/root 743 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/LISPValue.hpp -rw-r--r-- root/root 5054 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/LISPValueImpl.hpp -rw-r--r-- root/root 1517 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/LISPValueWeightor.hpp -rw-r--r-- root/root 4041 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/LISPValueWeightorImpl.hpp -rw-r--r-- root/root 900 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/LISQValueWeightor.hpp -rw-r--r-- root/root 267 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/LISSizeWeightor.hpp -rw-r--r-- root/root 360 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/LISSizeWeightorImpl.hpp -rw-r--r-- root/root 818 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/LongestIncreasingSubsequence.hpp -rw-r--r-- root/root 3755 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/LongestIncreasingSubsequenceImpl.hpp -rw-r--r-- root/root 1848 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/MapBySuffixArray.hpp -rw-r--r-- root/root 11118 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/MapBySuffixArrayImpl.hpp -rw-r--r-- root/root 1964 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/PrioritySearchTree.hpp -rw-r--r-- root/root 10112 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/PrioritySearchTreeImpl.hpp -rw-r--r-- root/root 1642 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/ScoreAnchors.hpp -rw-r--r-- root/root 5620 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/anchoring/ScoreAnchorsImpl.hpp drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/compare/ -rw-r--r-- root/root 1815 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/compare/CompareStrings.hpp drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/sorting/ -rw-r--r-- root/root 1508 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/sorting/DifferenceCovers.hpp -rw-r--r-- root/root 4672 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/sorting/Karkkainen.hpp -rw-r--r-- root/root 3130 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/sorting/LightweightSuffixArray.hpp -rw-r--r-- root/root 1683 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/sorting/MultikeyQuicksort.hpp -rw-r--r-- root/root 14544 2020-01-29 14:28 ./usr/include/pbseq/alignment/algorithms/sorting/qsufsort.hpp drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/bwt/ -rw-r--r-- root/root 9659 2020-01-29 14:28 ./usr/include/pbseq/alignment/bwt/BWT.hpp -rw-r--r-- root/root 8156 2020-01-29 14:28 ./usr/include/pbseq/alignment/bwt/Occ.hpp -rw-r--r-- root/root 12460 2020-01-29 14:28 ./usr/include/pbseq/alignment/bwt/PackedHash.hpp -rw-r--r-- root/root 1121 2020-01-29 14:28 ./usr/include/pbseq/alignment/bwt/Pos.hpp drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignment/ -rw-r--r-- root/root 271 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignment/AlignedPair.h -rw-r--r-- root/root 6138 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp -rw-r--r-- root/root 18126 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignment/AlignmentCandidate.hpp -rw-r--r-- root/root 652 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignment/AlignmentContext.hpp -rw-r--r-- root/root 422 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignment/AlignmentGapList.h -rw-r--r-- root/root 445 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignment/AlignmentMap.hpp -rw-r--r-- root/root 463 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignment/AlignmentStats.hpp -rw-r--r-- root/root 11850 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignment/ByteAlignment.h -rw-r--r-- root/root 849 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignment/CmpFile.hpp -rw-r--r-- root/root 1611 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignment/CmpIndexedStringTable.h -rw-r--r-- root/root 412 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignment/CmpReadGroupTable.h -rw-r--r-- root/root 391 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignment/CmpRefSeqTable.h -rw-r--r-- root/root 5527 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignment/FilterCriteria.hpp -rw-r--r-- root/root 793 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignment/Path.h -rw-r--r-- root/root 2201 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignment/SAMToAlignmentCandidateAdapter.hpp drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignmentset/ -rw-r--r-- root/root 2604 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignmentset/AlignmentSetToCmpH5Adapter.hpp -rw-r--r-- root/root 10325 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignmentset/AlignmentSetToCmpH5AdapterImpl.hpp -rw-r--r-- root/root 315 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignmentset/SAMQVConversion.hpp -rw-r--r-- root/root 991 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/alignmentset/SAMSupplementalQVList.hpp drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/anchoring/ -rw-r--r-- root/root 827 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/anchoring/AnchorParameters.hpp -rw-r--r-- root/root 569 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/anchoring/ClusterList.hpp -rw-r--r-- root/root 4198 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/anchoring/MatchPos.hpp -rw-r--r-- root/root 2692 2020-01-29 14:28 ./usr/include/pbseq/alignment/datastructures/anchoring/WeightedInterval.hpp drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/files/ -rw-r--r-- root/root 547 2020-01-29 14:28 ./usr/include/pbseq/alignment/files/BaseSequenceIO.hpp -rw-r--r-- root/root 381 2020-01-29 14:28 ./usr/include/pbseq/alignment/files/CCSIterator.hpp -rw-r--r-- root/root 579 2020-01-29 14:28 ./usr/include/pbseq/alignment/files/FragmentCCSIterator.hpp -rw-r--r-- root/root 4744 2020-01-29 14:28 ./usr/include/pbseq/alignment/files/ReaderAgglomerate.hpp -rw-r--r-- root/root 1063 2020-01-29 14:28 ./usr/include/pbseq/alignment/files/ReaderAgglomerateImpl.hpp drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/format/ -rw-r--r-- root/root 1063 2020-01-29 14:28 ./usr/include/pbseq/alignment/format/BAMPrinter.hpp -rw-r--r-- root/root 7400 2020-01-29 14:28 ./usr/include/pbseq/alignment/format/BAMPrinterImpl.hpp -rw-r--r-- root/root 545 2020-01-29 14:28 ./usr/include/pbseq/alignment/format/CompareSequencesPrinter.hpp -rw-r--r-- root/root 3155 2020-01-29 14:28 ./usr/include/pbseq/alignment/format/CompareSequencesPrinterImpl.hpp -rw-r--r-- root/root 485 2020-01-29 14:28 ./usr/include/pbseq/alignment/format/IntervalPrinter.hpp -rw-r--r-- root/root 10483 2020-01-29 14:28 ./usr/include/pbseq/alignment/format/SAMHeaderPrinter.hpp -rw-r--r-- root/root 4005 2020-01-29 14:28 ./usr/include/pbseq/alignment/format/SAMPrinter.hpp -rw-r--r-- root/root 10771 2020-01-29 14:28 ./usr/include/pbseq/alignment/format/SAMPrinterImpl.hpp -rw-r--r-- root/root 4655 2020-01-29 14:28 ./usr/include/pbseq/alignment/format/StickAlignmentPrinter.hpp -rw-r--r-- root/root 350 2020-01-29 14:28 ./usr/include/pbseq/alignment/format/SummaryPrinter.hpp -rw-r--r-- root/root 1431 2020-01-29 14:28 ./usr/include/pbseq/alignment/format/VulgarPrinter.hpp -rw-r--r-- root/root 4497 2020-01-29 14:28 ./usr/include/pbseq/alignment/format/XMLPrinter.hpp drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/ipc/ -rw-r--r-- root/root 1089 2020-01-29 14:28 ./usr/include/pbseq/alignment/ipc/SharedMemoryAllocator.hpp drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/query/ -rw-r--r-- root/root 977 2020-01-29 14:28 ./usr/include/pbseq/alignment/query/PbiFilterZmwGroupQuery.h -rw-r--r-- root/root 878 2020-01-29 14:28 ./usr/include/pbseq/alignment/query/SequentialZmwGroupQuery.h drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/qvs/ -rw-r--r-- root/root 651 2020-01-29 14:28 ./usr/include/pbseq/alignment/qvs/QualityValueProfile.hpp drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/simulator/ -rw-r--r-- root/root 1186 2020-01-29 14:28 ./usr/include/pbseq/alignment/simulator/CDFMap.hpp -rw-r--r-- root/root 3135 2020-01-29 14:28 ./usr/include/pbseq/alignment/simulator/ContextOutputList.hpp -rw-r--r-- root/root 610 2020-01-29 14:28 ./usr/include/pbseq/alignment/simulator/ContextSample.hpp -rw-r--r-- root/root 417 2020-01-29 14:28 ./usr/include/pbseq/alignment/simulator/ContextSet.hpp -rw-r--r-- root/root 506 2020-01-29 14:28 ./usr/include/pbseq/alignment/simulator/LengthHistogram.hpp -rw-r--r-- root/root 1373 2020-01-29 14:28 ./usr/include/pbseq/alignment/simulator/OutputList.hpp -rw-r--r-- root/root 1587 2020-01-29 14:28 ./usr/include/pbseq/alignment/simulator/OutputSample.hpp -rw-r--r-- root/root 803 2020-01-29 14:28 ./usr/include/pbseq/alignment/simulator/OutputSampleList.hpp -rw-r--r-- root/root 3895 2020-01-29 14:28 ./usr/include/pbseq/alignment/simulator/OutputSampleListSet.hpp -rw-r--r-- root/root 554 2020-01-29 14:28 ./usr/include/pbseq/alignment/simulator/QualitySample.hpp drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/statistics/ -rw-r--r-- root/root 3478701 2020-01-29 14:28 ./usr/include/pbseq/alignment/statistics/AnchorDistributionTable.hpp -rw-r--r-- root/root 338 2020-01-29 14:28 ./usr/include/pbseq/alignment/statistics/LookupAnchorDistribution.hpp -rw-r--r-- root/root 7177 2020-01-29 14:28 ./usr/include/pbseq/alignment/statistics/StatUtils.hpp -rw-r--r-- root/root 1409 2020-01-29 14:28 ./usr/include/pbseq/alignment/statistics/StatUtilsImpl.hpp -rw-r--r-- root/root 413 2020-01-29 14:28 ./usr/include/pbseq/alignment/statistics/VarianceAccumulator.hpp -rw-r--r-- root/root 1136 2020-01-29 14:28 ./usr/include/pbseq/alignment/statistics/VarianceAccumulatorImpl.hpp -rw-r--r-- root/root 45199 2020-01-29 14:28 ./usr/include/pbseq/alignment/statistics/cdfs.hpp -rw-r--r-- root/root 304 2020-01-29 14:28 ./usr/include/pbseq/alignment/statistics/pdfs.hpp drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/suffixarray/ -rw-r--r-- root/root 6021 2020-01-29 14:28 ./usr/include/pbseq/alignment/suffixarray/LCPTable.hpp -rw-r--r-- root/root 2791 2020-01-29 14:28 ./usr/include/pbseq/alignment/suffixarray/SharedSuffixArray.hpp -rw-r--r-- root/root 40355 2020-01-29 14:28 ./usr/include/pbseq/alignment/suffixarray/SuffixArray.hpp -rw-r--r-- root/root 605 2020-01-29 14:28 ./usr/include/pbseq/alignment/suffixarray/SuffixArrayTypes.hpp -rw-r--r-- root/root 15481 2020-01-29 14:28 ./usr/include/pbseq/alignment/suffixarray/ssort.hpp drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/ -rw-r--r-- root/root 581 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/BaseTuple.hpp -rw-r--r-- root/root 1932 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/CompressedDNATuple.hpp -rw-r--r-- root/root 222 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/CountedTuple.h -rw-r--r-- root/root 2721 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/DNATuple.hpp -rw-r--r-- root/root 6388 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/DNATupleImpl.hpp -rw-r--r-- root/root 1596 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/DNATupleList.h -rw-r--r-- root/root 1272 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/HashedTupleList.hpp -rw-r--r-- root/root 3254 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/HashedTupleListImpl.hpp -rw-r--r-- root/root 718 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/TupleCountTable.hpp -rw-r--r-- root/root 2910 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/TupleCountTableImpl.hpp -rw-r--r-- root/root 1153 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/TupleList.hpp -rw-r--r-- root/root 3230 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/TupleListImpl.hpp -rw-r--r-- root/root 972 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/TupleMask.h -rw-r--r-- root/root 864 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/TupleMatching.hpp -rw-r--r-- root/root 3418 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/TupleMatchingImpl.hpp -rw-r--r-- root/root 327 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/TupleMetrics.hpp -rw-r--r-- root/root 64 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/TupleOperations.h -rw-r--r-- root/root 56 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/TupleTranslations.h -rw-r--r-- root/root 2013 2020-01-29 14:28 ./usr/include/pbseq/alignment/tuples/tuple.h drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/include/pbseq/alignment/utils/ -rw-r--r-- root/root 650 2020-01-29 14:28 ./usr/include/pbseq/alignment/utils/FileOfFileNames.hpp -rw-r--r-- root/root 815 2020-01-29 14:28 ./usr/include/pbseq/alignment/utils/FileUtils.hpp -rw-r--r-- root/root 368 2020-01-29 14:28 ./usr/include/pbseq/alignment/utils/LogUtils.hpp -rw-r--r-- root/root 184 2020-01-29 14:28 ./usr/include/pbseq/alignment/utils/PhredUtils.hpp -rw-r--r-- root/root 1316 2020-01-29 14:28 ./usr/include/pbseq/alignment/utils/RangeUtils.hpp -rw-r--r-- root/root 3484 2020-01-29 14:28 ./usr/include/pbseq/alignment/utils/RegionUtils.hpp -rw-r--r-- root/root 1667 2020-01-29 14:28 ./usr/include/pbseq/alignment/utils/RegionUtilsImpl.hpp -rw-r--r-- root/root 2134 2020-01-29 14:28 ./usr/include/pbseq/alignment/utils/SimpleXMLUtils.hpp drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/lib/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/lib/aarch64-linux-gnu/ lrwxrwxrwx root/root 0 2020-01-29 14:28 ./usr/lib/aarch64-linux-gnu/libblasr.so -> libblasr.so.5.3.3 drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/lib/aarch64-linux-gnu/pkgconfig/ -rw-r--r-- root/root 297 2020-01-29 14:28 ./usr/lib/aarch64-linux-gnu/pkgconfig/libblasr.pc drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/share/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/share/doc/libblasr-dev/ -rw-r--r-- root/root 1764 2020-01-29 14:28 ./usr/share/doc/libblasr-dev/changelog.Debian.gz -rw-r--r-- root/root 4760 2020-01-29 14:28 ./usr/share/doc/libblasr-dev/copyright libblasr_5.3.3+dfsg-4_arm64.deb ------------------------------- new Debian package, version 2.0. size 1040124 bytes: control archive=948 bytes. 774 bytes, 16 lines control 222 bytes, 3 lines md5sums 40 bytes, 1 lines shlibs 67 bytes, 2 lines triggers Package: libblasr Source: pbseqlib Version: 5.3.3+dfsg-4 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 3145 Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.0), libhdf5-103-1, libhdf5-cpp-103-1 (>= 1.10.5), libpbbam1.3.0 (>= 1.3.0+dfsg), libpbcopper1.6.0 (>= 1.6.0+dfsg), libstdc++6 (>= 9) Section: libs Priority: optional Homepage: https://github.com/PacificBiosciences/blasr_libcpp Description: tools for aligning PacBio reads to target sequences Blasr_libcpp is a library used by blasr and other executables such as samtoh5, loadPulses for analyzing PacBio sequences. This library contains three sub-libraries, including pbdata, hdf and alignment. . This package contains the alignment sublibrary. drwxr-xr-x root/root 0 2020-01-29 14:28 ./ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/lib/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/lib/aarch64-linux-gnu/ -rw-r--r-- root/root 3202216 2020-01-29 14:28 ./usr/lib/aarch64-linux-gnu/libblasr.so.5.3.3 drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/share/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/share/doc/libblasr/ -rw-r--r-- root/root 1764 2020-01-29 14:28 ./usr/share/doc/libblasr/changelog.Debian.gz -rw-r--r-- root/root 4760 2020-01-29 14:28 ./usr/share/doc/libblasr/copyright libpbseq-dev_5.3.3+dfsg-4_arm64.deb ----------------------------------- new Debian package, version 2.0. size 5024 bytes: control archive=760 bytes. 753 bytes, 16 lines control 152 bytes, 2 lines md5sums Package: libpbseq-dev Source: pbseqlib Version: 5.3.3+dfsg-4 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 13 Depends: libpbdata-dev (= 5.3.3+dfsg-4), libpbihdf-dev (= 5.3.3+dfsg-4), libblasr-dev (= 5.3.3+dfsg-4) Section: libdevel Priority: optional Homepage: https://github.com/PacificBiosciences/blasr_libcpp Description: library for analyzing PacBio sequencing data (development files) Blasr_libcpp is a library used by blasr and other executables such as samtoh5, loadPulses for analyzing PacBio sequences. This library contains three sub-libraries, including pbdata, hdf and alignment. . This is a metapackage that depends on the pbseqlib component development files. drwxr-xr-x root/root 0 2020-01-29 14:28 ./ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/share/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-01-29 14:28 ./usr/share/doc/libpbseq-dev/ -rw-r--r-- root/root 1764 2020-01-29 14:28 ./usr/share/doc/libpbseq-dev/changelog.Debian.gz -rw-r--r-- root/root 4760 2020-01-29 14:28 ./usr/share/doc/libpbseq-dev/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [616 B] Get:5 copy:/<>/apt_archive ./ Packages [696 B] Fetched 2275 B in 0s (93.4 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libwww-perl binutils-multiarch libtext-template-perl zip Recommended packages: gnupg libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils sbuild-build-depends-lintian-dummy:arm64 t1utils unzip 0 upgraded, 86 newly installed, 0 to remove and 0 not upgraded. Need to get 6490 kB of archives. After this operation, 19.9 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.63-1 [35.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.3-7.1 [50.5 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.20-1 [532 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.20-1 [894 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libaliased-perl all 0.34-1 [13.8 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b3 [71.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b2 [11.3 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1 [12.6 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b1 [15.9 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b2 [25.6 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1 [12.9 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b2 [46.0 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.24-1 [18.6 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b5 [38.4 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1 [15.1 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-tiny-perl all 2.24-1 [16.2 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.23-1 [128 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libexception-class-perl all 1.44-1 [32.3 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-perl all 0.03+ds1-1 [18.9 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-1 [14.2 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002002-1 [37.8 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b5 [63.6 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-util-perl amd64 1.07-3+b5 [22.9 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-install-perl all 0.928-1 [11.4 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-optlist-perl all 0.110-1 [10.6 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-perl all 0.987-1 [47.2 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-messagepack-perl amd64 1.00-4 [38.3 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-domain-perl all 0.10-1 [12.3 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b1 [26.0 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-address-xs-perl amd64 1.04-1+b2 [28.1 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1 [7642 B] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.11-1 [8888 B] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1 [317 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-html5-entities-perl all 0.004-1 [21.8 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004002-1 [13.1 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-utilsby-perl all 0.11-1 [15.4 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libmarkdown2 amd64 2.2.6-1 [36.8 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.004000-1 [59.4 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1 [10.2 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libmouse-perl amd64 2.5.10-1 [173 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b2 [12.0 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1 [13.5 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.114-1 [53.6 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-gzip-perl amd64 0.19-1+b6 [17.4 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libproc-processtable-perl amd64 0.59-2 [45.7 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.018+ds-1 [98.9 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.018+ds-1 [103 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-4+b7 [8696 B] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.12-1 [12.7 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.8-1 [198 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b2 [75.1 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-1 [39.2 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.010006-1 [339 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b1 [20.2 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-2 [90.2 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.82+repack-1 [35.6 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.21-8 [84.3 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-1 [83.4 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-25 [172 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.96.0 [1265 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 6490 kB in 0s (49.3 MB/s) Selecting previously unselected package diffstat. (Reading database ... 41540 files and directories currently installed.) Preparing to unpack .../00-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../01-libassuan0_2.5.3-7.1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7.1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../02-gpgconf_2.2.20-1_amd64.deb ... Unpacking gpgconf (2.2.20-1) ... Selecting previously unselected package gpg. Preparing to unpack .../03-gpg_2.2.20-1_amd64.deb ... Unpacking gpg (2.2.20-1) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../04-libaliased-perl_0.34-1_all.deb ... Unpacking libaliased-perl (0.34-1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../05-libapt-pkg-perl_0.1.36+b3_amd64.deb ... Unpacking libapt-pkg-perl (0.1.36+b3) ... Selecting previously unselected package libb-hooks-op-check-perl. Preparing to unpack .../06-libb-hooks-op-check-perl_0.22-1+b2_amd64.deb ... Unpacking libb-hooks-op-check-perl (0.22-1+b2) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../07-libdynaloader-functions-perl_0.003-1_all.deb ... Unpacking libdynaloader-functions-perl (0.003-1) ... Selecting previously unselected package libdevel-callchecker-perl. Preparing to unpack .../08-libdevel-callchecker-perl_0.008-1+b1_amd64.deb ... Unpacking libdevel-callchecker-perl (0.008-1+b1) ... Selecting previously unselected package libparams-classify-perl. Preparing to unpack .../09-libparams-classify-perl_0.015-1+b2_amd64.deb ... Unpacking libparams-classify-perl (0.015-1+b2) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../10-libmodule-runtime-perl_0.016-1_all.deb ... Unpacking libmodule-runtime-perl (0.016-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../11-libtry-tiny-perl_0.30-1_all.deb ... Unpacking libtry-tiny-perl (0.30-1) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../12-libmodule-implementation-perl_0.09-1_all.deb ... Unpacking libmodule-implementation-perl (0.09-1) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../13-libsub-exporter-progressive-perl_0.001013-1_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-1) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../14-libvariable-magic-perl_0.62-1+b2_amd64.deb ... Unpacking libvariable-magic-perl (0.62-1+b2) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../15-libb-hooks-endofscope-perl_0.24-1_all.deb ... Unpacking libb-hooks-endofscope-perl (0.24-1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../16-libcapture-tiny-perl_0.48-1_all.deb ... Unpacking libcapture-tiny-perl (0.48-1) ... Selecting previously unselected package libclass-data-inheritable-perl. Preparing to unpack .../17-libclass-data-inheritable-perl_0.08-3_all.deb ... Unpacking libclass-data-inheritable-perl (0.08-3) ... Selecting previously unselected package libclass-method-modifiers-perl. Preparing to unpack .../18-libclass-method-modifiers-perl_2.13-1_all.deb ... Unpacking libclass-method-modifiers-perl (2.13-1) ... Selecting previously unselected package libclass-xsaccessor-perl. Preparing to unpack .../19-libclass-xsaccessor-perl_1.19-3+b5_amd64.deb ... Unpacking libclass-xsaccessor-perl (1.19-3+b5) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../20-libclone-perl_0.45-1_amd64.deb ... Unpacking libclone-perl (0.45-1) ... Selecting previously unselected package libconfig-tiny-perl. Preparing to unpack .../21-libconfig-tiny-perl_2.24-1_all.deb ... Unpacking libconfig-tiny-perl (2.24-1) ... Selecting previously unselected package libcpanel-json-xs-perl. Preparing to unpack .../22-libcpanel-json-xs-perl_4.23-1_amd64.deb ... Unpacking libcpanel-json-xs-perl (4.23-1) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../23-libdevel-stacktrace-perl_2.0400-1_all.deb ... Unpacking libdevel-stacktrace-perl (2.0400-1) ... Selecting previously unselected package libexception-class-perl. Preparing to unpack .../24-libexception-class-perl_1.44-1_all.deb ... Unpacking libexception-class-perl (1.44-1) ... Selecting previously unselected package libiterator-perl. Preparing to unpack .../25-libiterator-perl_0.03+ds1-1_all.deb ... Unpacking libiterator-perl (0.03+ds1-1) ... Selecting previously unselected package libiterator-util-perl. Preparing to unpack .../26-libiterator-util-perl_0.02+ds1-1_all.deb ... Unpacking libiterator-util-perl (0.02+ds1-1) ... Selecting previously unselected package libexporter-tiny-perl. Preparing to unpack .../27-libexporter-tiny-perl_1.002002-1_all.deb ... Unpacking libexporter-tiny-perl (1.002002-1) ... Selecting previously unselected package liblist-moreutils-perl. Preparing to unpack .../28-liblist-moreutils-perl_0.416-1+b5_amd64.deb ... Unpacking liblist-moreutils-perl (0.416-1+b5) ... Selecting previously unselected package libparams-util-perl. Preparing to unpack .../29-libparams-util-perl_1.07-3+b5_amd64.deb ... Unpacking libparams-util-perl (1.07-3+b5) ... Selecting previously unselected package libsub-install-perl. Preparing to unpack .../30-libsub-install-perl_0.928-1_all.deb ... Unpacking libsub-install-perl (0.928-1) ... Selecting previously unselected package libdata-optlist-perl. Preparing to unpack .../31-libdata-optlist-perl_0.110-1_all.deb ... Unpacking libdata-optlist-perl (0.110-1) ... Selecting previously unselected package libsub-exporter-perl. Preparing to unpack .../32-libsub-exporter-perl_0.987-1_all.deb ... Unpacking libsub-exporter-perl (0.987-1) ... Selecting previously unselected package libdata-dpath-perl. Preparing to unpack .../33-libdata-dpath-perl_0.58-1_all.deb ... Unpacking libdata-dpath-perl (0.58-1) ... Selecting previously unselected package libdata-messagepack-perl. Preparing to unpack .../34-libdata-messagepack-perl_1.00-4_amd64.deb ... Unpacking libdata-messagepack-perl (1.00-4) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../35-libnet-domain-tld-perl_1.75-1_all.deb ... Unpacking libnet-domain-tld-perl (1.75-1) ... Selecting previously unselected package libdata-validate-domain-perl. Preparing to unpack .../36-libdata-validate-domain-perl_0.10-1_all.deb ... Unpacking libdata-validate-domain-perl (0.10-1) ... Selecting previously unselected package libdevel-size-perl. Preparing to unpack .../37-libdevel-size-perl_0.83-1+b1_amd64.deb ... Unpacking libdevel-size-perl (0.83-1+b1) ... Selecting previously unselected package libemail-address-xs-perl. Preparing to unpack .../38-libemail-address-xs-perl_1.04-1+b2_amd64.deb ... Unpacking libemail-address-xs-perl (1.04-1+b2) ... Selecting previously unselected package libipc-system-simple-perl. Preparing to unpack .../39-libipc-system-simple-perl_1.30-1_all.deb ... Unpacking libipc-system-simple-perl (1.30-1) ... Selecting previously unselected package libfile-basedir-perl. Preparing to unpack .../40-libfile-basedir-perl_0.08-1_all.deb ... Unpacking libfile-basedir-perl (0.08-1) ... Selecting previously unselected package libnumber-compare-perl. Preparing to unpack .../41-libnumber-compare-perl_0.03-1_all.deb ... Unpacking libnumber-compare-perl (0.03-1) ... Selecting previously unselected package libtext-glob-perl. Preparing to unpack .../42-libtext-glob-perl_0.11-1_all.deb ... Unpacking libtext-glob-perl (0.11-1) ... Selecting previously unselected package libfile-find-rule-perl. Preparing to unpack .../43-libfile-find-rule-perl_0.34-1_all.deb ... Unpacking libfile-find-rule-perl (0.34-1) ... Selecting previously unselected package libfont-ttf-perl. Preparing to unpack .../44-libfont-ttf-perl_1.06-1_all.deb ... Unpacking libfont-ttf-perl (1.06-1) ... Selecting previously unselected package libhtml-html5-entities-perl. Preparing to unpack .../45-libhtml-html5-entities-perl_0.004-1_all.deb ... Unpacking libhtml-html5-entities-perl (0.004-1) ... Selecting previously unselected package libimport-into-perl. Preparing to unpack .../46-libimport-into-perl_1.002005-1_all.deb ... Unpacking libimport-into-perl (1.002005-1) ... Selecting previously unselected package libipc-run3-perl. Preparing to unpack .../47-libipc-run3-perl_0.048-2_all.deb ... Unpacking libipc-run3-perl (0.048-2) ... Selecting previously unselected package libjson-maybexs-perl. Preparing to unpack .../48-libjson-maybexs-perl_1.004002-1_all.deb ... Unpacking libjson-maybexs-perl (1.004002-1) ... Selecting previously unselected package liblist-compare-perl. Preparing to unpack .../49-liblist-compare-perl_0.55-1_all.deb ... Unpacking liblist-compare-perl (0.55-1) ... Selecting previously unselected package liblist-utilsby-perl. Preparing to unpack .../50-liblist-utilsby-perl_0.11-1_all.deb ... Unpacking liblist-utilsby-perl (0.11-1) ... Selecting previously unselected package liblzo2-2:amd64. Preparing to unpack .../51-liblzo2-2_2.10-2_amd64.deb ... Unpacking liblzo2-2:amd64 (2.10-2) ... Selecting previously unselected package libmarkdown2:amd64. Preparing to unpack .../52-libmarkdown2_2.2.6-1_amd64.deb ... Unpacking libmarkdown2:amd64 (2.2.6-1) ... Selecting previously unselected package librole-tiny-perl. Preparing to unpack .../53-librole-tiny-perl_2.001004-1_all.deb ... Unpacking librole-tiny-perl (2.001004-1) ... Selecting previously unselected package libstrictures-perl. Preparing to unpack .../54-libstrictures-perl_2.000006-1_all.deb ... Unpacking libstrictures-perl (2.000006-1) ... Selecting previously unselected package libsub-quote-perl. Preparing to unpack .../55-libsub-quote-perl_2.006006-1_all.deb ... Unpacking libsub-quote-perl (2.006006-1) ... Selecting previously unselected package libmoo-perl. Preparing to unpack .../56-libmoo-perl_2.004000-1_all.deb ... Unpacking libmoo-perl (2.004000-1) ... Selecting previously unselected package libmoox-aliases-perl. Preparing to unpack .../57-libmoox-aliases-perl_0.001006-1_all.deb ... Unpacking libmoox-aliases-perl (0.001006-1) ... Selecting previously unselected package libmouse-perl. Preparing to unpack .../58-libmouse-perl_2.5.10-1_amd64.deb ... Unpacking libmouse-perl (2.5.10-1) ... Selecting previously unselected package libpackage-stash-perl. Preparing to unpack .../59-libpackage-stash-perl_0.38-1_all.deb ... Unpacking libpackage-stash-perl (0.38-1) ... Selecting previously unselected package libsub-identify-perl. Preparing to unpack .../60-libsub-identify-perl_0.14-1+b2_amd64.deb ... Unpacking libsub-identify-perl (0.14-1+b2) ... Selecting previously unselected package libsub-name-perl. Preparing to unpack .../61-libsub-name-perl_0.26-1_amd64.deb ... Unpacking libsub-name-perl (0.26-1) ... Selecting previously unselected package libnamespace-clean-perl. Preparing to unpack .../62-libnamespace-clean-perl_0.27-1_all.deb ... Unpacking libnamespace-clean-perl (0.27-1) ... Selecting previously unselected package libpath-tiny-perl. Preparing to unpack .../63-libpath-tiny-perl_0.114-1_all.deb ... Unpacking libpath-tiny-perl (0.114-1) ... Selecting previously unselected package libperlio-gzip-perl. Preparing to unpack .../64-libperlio-gzip-perl_0.19-1+b6_amd64.deb ... Unpacking libperlio-gzip-perl (0.19-1+b6) ... Selecting previously unselected package libproc-processtable-perl. Preparing to unpack .../65-libproc-processtable-perl_0.59-2_amd64.deb ... Unpacking libproc-processtable-perl (0.59-2) ... Selecting previously unselected package libsereal-decoder-perl. Preparing to unpack .../66-libsereal-decoder-perl_4.018+ds-1_amd64.deb ... Unpacking libsereal-decoder-perl (4.018+ds-1) ... Selecting previously unselected package libsereal-encoder-perl. Preparing to unpack .../67-libsereal-encoder-perl_4.018+ds-1_amd64.deb ... Unpacking libsereal-encoder-perl (4.018+ds-1) ... Selecting previously unselected package libtext-levenshteinxs-perl. Preparing to unpack .../68-libtext-levenshteinxs-perl_0.03-4+b7_amd64.deb ... Unpacking libtext-levenshteinxs-perl (0.03-4+b7) ... Selecting previously unselected package libtext-markdown-discount-perl:amd64. Preparing to unpack .../69-libtext-markdown-discount-perl_0.12-1_amd64.deb ... Unpacking libtext-markdown-discount-perl:amd64 (0.12-1) ... Selecting previously unselected package libtext-xslate-perl. Preparing to unpack .../70-libtext-xslate-perl_3.5.8-1_amd64.deb ... Unpacking libtext-xslate-perl (3.5.8-1) ... Selecting previously unselected package libtime-duration-perl. Preparing to unpack .../71-libtime-duration-perl_1.21-1_all.deb ... Unpacking libtime-duration-perl (1.21-1) ... Selecting previously unselected package libtime-moment-perl. Preparing to unpack .../72-libtime-moment-perl_0.44-1+b2_amd64.deb ... Unpacking libtime-moment-perl (0.44-1+b2) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../73-libtimedate-perl_2.3300-1_all.deb ... Unpacking libtimedate-perl (2.3300-1) ... Selecting previously unselected package libtype-tiny-perl. Preparing to unpack .../74-libtype-tiny-perl_1.010006-1_all.deb ... Unpacking libtype-tiny-perl (1.010006-1) ... Selecting previously unselected package libunicode-utf8-perl. Preparing to unpack .../75-libunicode-utf8-perl_0.62-1+b1_amd64.deb ... Unpacking libunicode-utf8-perl (0.62-1+b1) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../76-liburi-perl_1.76-2_all.deb ... Unpacking liburi-perl (1.76-2) ... Selecting previously unselected package libyaml-0-2:amd64. Preparing to unpack .../77-libyaml-0-2_0.2.2-1_amd64.deb ... Unpacking libyaml-0-2:amd64 (0.2.2-1) ... Selecting previously unselected package libyaml-libyaml-perl. Preparing to unpack .../78-libyaml-libyaml-perl_0.82+repack-1_amd64.deb ... Unpacking libyaml-libyaml-perl (0.82+repack-1) ... Selecting previously unselected package lzip. Preparing to unpack .../79-lzip_1.21-8_amd64.deb ... Unpacking lzip (1.21-8) ... Selecting previously unselected package lzop. Preparing to unpack .../80-lzop_1.04-1_amd64.deb ... Unpacking lzop (1.04-1) ... Selecting previously unselected package patchutils. Preparing to unpack .../81-patchutils_0.4.2-1_amd64.deb ... Unpacking patchutils (0.4.2-1) ... Selecting previously unselected package t1utils. Preparing to unpack .../82-t1utils_1.41-4_amd64.deb ... Unpacking t1utils (1.41-4) ... Selecting previously unselected package unzip. Preparing to unpack .../83-unzip_6.0-25_amd64.deb ... Unpacking unzip (6.0-25) ... Selecting previously unselected package lintian. Preparing to unpack .../84-lintian_2.96.0_all.deb ... Unpacking lintian (2.96.0) ... Selecting previously unselected package sbuild-build-depends-lintian-dummy:arm64. Preparing to unpack .../85-sbuild-build-depends-lintian-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-lintian-dummy:arm64 (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.36+b3) ... Setting up libunicode-utf8-perl (0.62-1+b1) ... Setting up libmouse-perl (2.5.10-1) ... Setting up libdata-messagepack-perl (1.00-4) ... Setting up libdynaloader-functions-perl (0.003-1) ... Setting up libtext-glob-perl (0.11-1) ... Setting up libclass-method-modifiers-perl (2.13-1) ... Setting up liblist-compare-perl (0.55-1) ... Setting up libclone-perl (0.45-1) ... Setting up libyaml-0-2:amd64 (0.2.2-1) ... Setting up libsub-identify-perl (0.14-1+b2) ... Setting up libcpanel-json-xs-perl (4.23-1) ... Setting up libdevel-size-perl (0.83-1+b1) ... Setting up unzip (6.0-25) ... Setting up libyaml-libyaml-perl (0.82+repack-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up liblzo2-2:amd64 (2.10-2) ... Setting up libtime-moment-perl (0.44-1+b2) ... Setting up libassuan0:amd64 (2.5.3-7.1) ... Setting up libconfig-tiny-perl (2.24-1) ... Setting up libsereal-encoder-perl (4.018+ds-1) ... Setting up liblist-utilsby-perl (0.11-1) ... Setting up libsub-install-perl (0.928-1) ... Setting up libnumber-compare-perl (0.03-1) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004002-1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up libipc-system-simple-perl (1.30-1) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up lzip (1.21-8) ... Setting up t1utils (1.41-4) ... Setting up diffstat (1.63-1) ... Setting up libvariable-magic-perl (0.62-1+b2) ... Setting up libb-hooks-op-check-perl (0.22-1+b2) ... Setting up libparams-util-perl (1.07-3+b5) ... Setting up libtime-duration-perl (1.21-1) ... Setting up libtext-xslate-perl (3.5.8-1) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3300-1) ... Setting up libsub-name-perl (0.26-1) ... Setting up libdata-validate-domain-perl (0.10-1) ... Setting up libproc-processtable-perl (0.59-2) ... Setting up libpath-tiny-perl (0.114-1) ... Setting up lzop (1.04-1) ... Setting up gpgconf (2.2.20-1) ... Setting up librole-tiny-perl (2.001004-1) ... Setting up libipc-run3-perl (0.048-2) ... Setting up libaliased-perl (0.34-1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libdevel-stacktrace-perl (2.0400-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b5) ... Setting up libexporter-tiny-perl (1.002002-1) ... Setting up libfont-ttf-perl (1.06-1) ... Setting up libtext-levenshteinxs-perl (0.03-4+b7) ... Setting up libperlio-gzip-perl (0.19-1+b6) ... Setting up libhtml-html5-entities-perl (0.004-1) ... Setting up libsereal-decoder-perl (4.018+ds-1) ... Setting up libmarkdown2:amd64 (2.2.6-1) ... Setting up liburi-perl (1.76-2) ... Setting up gpg (2.2.20-1) ... Setting up libemail-address-xs-perl (1.04-1+b2) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b5) ... Setting up libtype-tiny-perl (1.010006-1) ... Setting up libtext-markdown-discount-perl:amd64 (0.12-1) ... Setting up libexception-class-perl (1.44-1) ... Setting up libdevel-callchecker-perl (0.008-1+b1) ... Setting up libdata-optlist-perl (0.110-1) ... Setting up libsub-exporter-perl (0.987-1) ... Setting up libiterator-perl (0.03+ds1-1) ... Setting up libiterator-util-perl (0.02+ds1-1) ... Setting up libparams-classify-perl (0.015-1+b2) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.004000-1) ... Setting up libmoox-aliases-perl (0.001006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.96.0) ... Setting up sbuild-build-depends-lintian-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.31-3) ... Processing triggers for man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for mime-support (3.64) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 336736 Build-Time: 461 Distribution: unstable Foreign Architectures: arm64 Host Architecture: arm64 Install-Time: 35 Job: pbseqlib_5.3.3+dfsg-4 Lintian: pass Machine Architecture: amd64 Package: pbseqlib Package-Time: 505 Source-Version: 5.3.3+dfsg-4 Space: 336736 Status: successful Version: 5.3.3+dfsg-4 -------------------------------------------------------------------------------- Finished at 2020-09-25T20:43:27Z Build needed 00:08:25, 336736k disk space