sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | pbseqlib 5.3.5+dfsg-6 (arm64) Sat, 20 Apr 2024 19:59:06 +0000 | +==============================================================================+ Package: pbseqlib Version: 5.3.5+dfsg-6 Source Version: 5.3.5+dfsg-6 Distribution: unstable Machine Architecture: amd64 Host Architecture: arm64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-45e7c721-b9cd-4817-b270-951cd0dc2696' with '<>' I: NOTICE: Log filtering will replace 'build/pbseqlib-I4yrhe/resolver-9qFEhJ' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [198 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2024-04-20-1405.58-F-2024-04-20-0206.21.pdiff [27.5 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2024-04-20-1405.58-F-2024-04-20-0206.21.pdiff [65.3 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2024-04-20-1405.58-F-2024-04-20-0206.21.pdiff [27.5 kB] Get:6 http://localhost:3142/debian sid/main arm64 Packages [9761 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2024-04-20-1405.58-F-2024-04-20-0206.21.pdiff [65.3 kB] Fetched 10.2 MB in 3s (3728 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: tzdata 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 255 kB of archives. After this operation, 0 B of additional disk space will be used. Get:1 http://localhost:3142/debian sid/main amd64 tzdata all 2024a-3 [255 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 255 kB in 0s (0 B/s) (Reading database ... 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Run 'dpkg-reconfigure tzdata' if you wish to change it. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'pbseqlib' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/pbseqlib.git Please use: git clone https://salsa.debian.org/med-team/pbseqlib.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 987 kB of source archives. Get:1 http://localhost:3142/debian sid/main pbseqlib 5.3.5+dfsg-6 (dsc) [2450 B] Get:2 http://localhost:3142/debian sid/main pbseqlib 5.3.5+dfsg-6 (tar) [973 kB] Get:3 http://localhost:3142/debian sid/main pbseqlib 5.3.5+dfsg-6 (diff) [11.7 kB] Fetched 987 kB in 1s (781 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/pbseqlib-I4yrhe/pbseqlib-5.3.5+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/pbseqlib-I4yrhe' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), d-shlibs, meson, pkg-config, cmake, zlib1g-dev, libhdf5-dev, libboost-dev, libpbbam-dev (>> 2.3.0), libpbcopper-dev (>> 2.2.0), libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 Filtered Build-Depends: debhelper-compat (= 13), d-shlibs, meson, pkg-config, cmake, zlib1g-dev, libhdf5-dev, libboost-dev, libpbbam-dev (>> 2.3.0), libpbcopper-dev (>> 2.2.0), libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [902 B] Get:5 copy:/<>/apt_archive ./ Packages [897 B] Fetched 2408 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following package was automatically installed and is no longer required: mount Use 'apt autoremove' to remove it. The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils cmake cmake-data cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-13-aarch64-linux-gnu gcc-13-aarch64-linux-gnu-base gcc-13-base:arm64 gcc-13-cross-base gcc-14-base:arm64 gcc-14-cross-base gcc-aarch64-linux-gnu gettext gettext-base groff-base hdf5-helpers:arm64 intltool-debian libaec-dev:arm64 libaec0:arm64 libarchive-zip-perl libarchive13t64 libasan8:arm64 libasan8-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libboost-dev:arm64 libboost1.83-dev:arm64 libbrotli1 libbrotli1:arm64 libbz2-1.0:arm64 libc6:arm64 libc6-arm64-cross libc6-dev:arm64 libc6-dev-arm64-cross libcom-err2 libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:arm64 libcrypt1:arm64 libcurl3t64-gnutls:arm64 libcurl4-gnutls-dev:arm64 libcurl4t64 libcurl4t64:arm64 libdb5.3t64:arm64 libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:arm64 libdeflate0:arm64 libelf1t64 libexpat1 libfakeroot libffi8:arm64 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-13-dev:arm64 libgcc-13-dev-arm64-cross libgcc-s1:arm64 libgcc-s1-arm64-cross libgfortran5:arm64 libgmp10:arm64 libgnutls30t64:arm64 libgomp1:arm64 libgomp1-arm64-cross libgssapi-krb5-2 libgssapi-krb5-2:arm64 libhdf5-103-1t64:arm64 libhdf5-cpp-103-1t64:arm64 libhdf5-dev:arm64 libhdf5-fortran-102t64:arm64 libhdf5-hl-100t64:arm64 libhdf5-hl-cpp-100t64:arm64 libhdf5-hl-fortran-100t64:arm64 libhogweed6t64:arm64 libhts-dev:arm64 libhts3t64:arm64 libhtscodecs2:arm64 libhwasan0:arm64 libhwasan0-arm64-cross libicu72 libidn2-0:arm64 libio-string-perl libitm1:arm64 libitm1-arm64-cross libjpeg-dev:arm64 libjpeg62-turbo:arm64 libjpeg62-turbo-dev:arm64 libjsoncpp25 libk5crypto3 libk5crypto3:arm64 libkeyutils1 libkeyutils1:arm64 libkrb5-3 libkrb5-3:arm64 libkrb5support0 libkrb5support0:arm64 libldap-2.5-0 libldap-2.5-0:arm64 liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross liblzma-dev:arm64 liblzma5:arm64 libmagic-mgc libmagic1t64 libncursesw6 libnettle8t64:arm64 libnghttp2-14 libnghttp2-14:arm64 libp11-kit0:arm64 libpbbam-dev:arm64 libpbbam2.4.0:arm64 libpbcopper-dev:arm64 libpbcopper2.3.0:arm64 libpipeline1 libpkgconf3 libproc2-0 libpsl5t64 libpsl5t64:arm64 libpython3-stdlib libpython3.11-minimal libpython3.11-stdlib libreadline8t64 librhash0 librtmp1 librtmp1:arm64 libsasl2-2 libsasl2-2:arm64 libsasl2-modules-db libsasl2-modules-db:arm64 libsqlite3-0 libssh2-1t64 libssh2-1t64:arm64 libssl-dev:arm64 libssl3t64:arm64 libstdc++-13-dev:arm64 libstdc++-13-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libsz2:arm64 libtasn1-6:arm64 libtool libtsan2:arm64 libtsan2-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libunistring5:arm64 libuv1t64 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:arm64 m4 man-db media-types meson netbase ninja-build pkg-config:arm64 pkgconf:arm64 pkgconf-bin po-debconf procps python3 python3-distutils python3-lib2to3 python3-minimal python3-pkg-resources python3-setuptools python3.11 python3.11-minimal readline-common sensible-utils ucf zlib1g:arm64 zlib1g-dev:arm64 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc cmake-doc cmake-format elpa-cmake-mode gcc-13-locales cpp-13-doc cpp-doc dh-make binutils-multiarch gcc-13-doc manpages-dev flex bison gdb-aarch64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libboost-doc:arm64 libboost1.83-doc:arm64 libboost-atomic1.83-dev:arm64 libboost-chrono1.83-dev:arm64 libboost-container1.83-dev:arm64 libboost-context1.83-dev:arm64 libboost-contract1.83-dev:arm64 libboost-coroutine1.83-dev:arm64 libboost-date-time1.83-dev:arm64 libboost-exception1.83-dev:arm64 libboost-fiber1.83-dev:arm64 libboost-filesystem1.83-dev:arm64 libboost-graph-parallel1.83-dev:arm64 libboost-graph1.83-dev:arm64 libboost-iostreams1.83-dev:arm64 libboost-json1.83-dev:arm64 libboost-locale1.83-dev:arm64 libboost-log1.83-dev:arm64 libboost-math1.83-dev:arm64 libboost-mpi-python1.83-dev:arm64 libboost-mpi1.83-dev:arm64 libboost-nowide1.83-dev:arm64 libboost-numpy1.83-dev:arm64 libboost-program-options1.83-dev:arm64 libboost-python1.83-dev:arm64 libboost-random1.83-dev:arm64 libboost-regex1.83-dev:arm64 libboost-serialization1.83-dev:arm64 libboost-stacktrace1.83-dev:arm64 libboost-system1.83-dev:arm64 libboost-test1.83-dev:arm64 libboost-thread1.83-dev:arm64 libboost-timer1.83-dev:arm64 libboost-type-erasure1.83-dev:arm64 libboost-url1.83-dev:arm64 libboost-wave1.83-dev:arm64 libboost1.83-tools-dev:arm64 libmpfrc++-dev:arm64 libntl-dev:arm64 glibc-doc:arm64 libc-l10n:arm64 locales:arm64 libnss-nis:arm64 libnss-nisplus:arm64 manpages-dev:arm64 libcurl4-doc:arm64 libgnutls28-dev:arm64 libidn-dev:arm64 libkrb5-dev:arm64 libldap2-dev:arm64 librtmp-dev:arm64 libssh2-1-dev:arm64 gnutls-bin:arm64 krb5-doc krb5-user krb5-doc:arm64 krb5-user:arm64 libhdf5-doc:arm64 liblzma-doc:arm64 libssl-doc:arm64 libstdc++-13-doc:arm64 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python-setuptools-doc python3.11-venv python3.11-doc binfmt-support readline-doc Recommended packages: curl | wget | lynx ca-certificates:arm64 ca-certificates libarchive-cpio-perl krb5-locales krb5-locales:arm64 libldap-common libldap-common:arm64 libgpm2 publicsuffix publicsuffix:arm64 libsasl2-modules libsasl2-modules:arm64 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils cmake cmake-data cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-13-aarch64-linux-gnu gcc-13-aarch64-linux-gnu-base gcc-13-base:arm64 gcc-13-cross-base gcc-14-base:arm64 gcc-14-cross-base gcc-aarch64-linux-gnu gettext gettext-base groff-base hdf5-helpers:arm64 intltool-debian libaec-dev:arm64 libaec0:arm64 libarchive-zip-perl libarchive13t64 libasan8:arm64 libasan8-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libboost-dev:arm64 libboost1.83-dev:arm64 libbrotli1 libbrotli1:arm64 libbz2-1.0:arm64 libc6:arm64 libc6-arm64-cross libc6-dev:arm64 libc6-dev-arm64-cross libcom-err2 libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:arm64 libcrypt1:arm64 libcurl3t64-gnutls:arm64 libcurl4-gnutls-dev:arm64 libcurl4t64 libcurl4t64:arm64 libdb5.3t64:arm64 libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:arm64 libdeflate0:arm64 libelf1t64 libexpat1 libfakeroot libffi8:arm64 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-13-dev:arm64 libgcc-13-dev-arm64-cross libgcc-s1:arm64 libgcc-s1-arm64-cross libgfortran5:arm64 libgmp10:arm64 libgnutls30t64:arm64 libgomp1:arm64 libgomp1-arm64-cross libgssapi-krb5-2 libgssapi-krb5-2:arm64 libhdf5-103-1t64:arm64 libhdf5-cpp-103-1t64:arm64 libhdf5-dev:arm64 libhdf5-fortran-102t64:arm64 libhdf5-hl-100t64:arm64 libhdf5-hl-cpp-100t64:arm64 libhdf5-hl-fortran-100t64:arm64 libhogweed6t64:arm64 libhts-dev:arm64 libhts3t64:arm64 libhtscodecs2:arm64 libhwasan0:arm64 libhwasan0-arm64-cross libicu72 libidn2-0:arm64 libio-string-perl libitm1:arm64 libitm1-arm64-cross libjpeg-dev:arm64 libjpeg62-turbo:arm64 libjpeg62-turbo-dev:arm64 libjsoncpp25 libk5crypto3 libk5crypto3:arm64 libkeyutils1 libkeyutils1:arm64 libkrb5-3 libkrb5-3:arm64 libkrb5support0 libkrb5support0:arm64 libldap-2.5-0 libldap-2.5-0:arm64 liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross liblzma-dev:arm64 liblzma5:arm64 libmagic-mgc libmagic1t64 libncursesw6 libnettle8t64:arm64 libnghttp2-14 libnghttp2-14:arm64 libp11-kit0:arm64 libpbbam-dev:arm64 libpbbam2.4.0:arm64 libpbcopper-dev:arm64 libpbcopper2.3.0:arm64 libpipeline1 libpkgconf3 libproc2-0 libpsl5t64 libpsl5t64:arm64 libpython3-stdlib libpython3.11-minimal libpython3.11-stdlib libreadline8t64 librhash0 librtmp1 librtmp1:arm64 libsasl2-2 libsasl2-2:arm64 libsasl2-modules-db libsasl2-modules-db:arm64 libsqlite3-0 libssh2-1t64 libssh2-1t64:arm64 libssl-dev:arm64 libssl3t64:arm64 libstdc++-13-dev:arm64 libstdc++-13-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libsz2:arm64 libtasn1-6:arm64 libtool libtsan2:arm64 libtsan2-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libunistring5:arm64 libuv1t64 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:arm64 m4 man-db media-types meson netbase ninja-build pkg-config:arm64 pkgconf:arm64 pkgconf-bin po-debconf procps python3 python3-distutils python3-lib2to3 python3-minimal python3-pkg-resources python3-setuptools python3.11 python3.11-minimal readline-common sbuild-build-depends-main-dummy:arm64 sensible-utils ucf zlib1g:arm64 zlib1g-dev:arm64 0 upgraded, 201 newly installed, 0 to remove and 0 not upgraded. Need to get 156 MB of archives. After this operation, 753 MB of additional disk space will be used. 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http://localhost:3142/debian sid/main amd64 binutils-aarch64-linux-gnu amd64 2.42-4 [3371 kB] Get:36 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get:37 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b2 [692 kB] Get:38 http://localhost:3142/debian sid/main amd64 libarchive13t64 amd64 3.7.2-2 [346 kB] Get:39 http://localhost:3142/debian sid/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB] Get:40 http://localhost:3142/debian sid/main amd64 libkrb5support0 amd64 1.20.1-6+b1 [33.3 kB] Get:41 http://localhost:3142/debian sid/main amd64 libcom-err2 amd64 1.47.0-2.4 [20.2 kB] Get:42 http://localhost:3142/debian sid/main amd64 libk5crypto3 amd64 1.20.1-6+b1 [79.8 kB] Get:43 http://localhost:3142/debian sid/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get:44 http://localhost:3142/debian sid/main amd64 libkrb5-3 amd64 1.20.1-6+b1 [333 kB] Get:45 http://localhost:3142/debian sid/main amd64 libgssapi-krb5-2 amd64 1.20.1-6+b1 [135 kB] Get:46 http://localhost:3142/debian sid/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-6 [19.5 kB] Get:47 http://localhost:3142/debian sid/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-6 [56.9 kB] Get:48 http://localhost:3142/debian sid/main amd64 libldap-2.5-0 amd64 2.5.16+dfsg-2 [185 kB] Get:49 http://localhost:3142/debian sid/main amd64 libnghttp2-14 amd64 1.61.0-1+b1 [75.6 kB] Get:50 http://localhost:3142/debian sid/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get:51 http://localhost:3142/debian sid/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get:52 http://localhost:3142/debian sid/main amd64 libssh2-1t64 amd64 1.11.0-4.1+b2 [215 kB] Get:53 http://localhost:3142/debian sid/main amd64 libcurl4t64 amd64 8.7.1-3 [441 kB] Get:54 http://localhost:3142/debian sid/main amd64 libjsoncpp25 amd64 1.9.5-6+b2 [81.9 kB] Get:55 http://localhost:3142/debian sid/main amd64 librhash0 amd64 1.4.3-3+b1 [132 kB] Get:56 http://localhost:3142/debian sid/main amd64 libuv1t64 amd64 1.48.0-1.1 [147 kB] Get:57 http://localhost:3142/debian sid/main amd64 cmake-data all 3.28.3-1 [2128 kB] Get:58 http://localhost:3142/debian sid/main amd64 cmake amd64 3.28.3-1+b1 [10.5 MB] Get:59 http://localhost:3142/debian sid/main amd64 gcc-13-aarch64-linux-gnu-base amd64 13.2.0-12cross1 [42.7 kB] Get:60 http://localhost:3142/debian sid/main amd64 cpp-13-aarch64-linux-gnu amd64 13.2.0-12cross1 [9774 kB] Get:61 http://localhost:3142/debian sid/main amd64 cpp-aarch64-linux-gnu amd64 4:13.2.0-7 [4724 B] Get:62 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.20 [16.3 kB] Get:63 http://localhost:3142/debian sid/main amd64 gcc-13-cross-base all 13.2.0-12cross1 [38.1 kB] Get:64 http://localhost:3142/debian sid/main amd64 gcc-14-cross-base all 14-20240127-1cross1 [37.9 kB] Get:65 http://localhost:3142/debian sid/main amd64 libc6-arm64-cross all 2.37-12cross1 [1006 kB] Get:66 http://localhost:3142/debian sid/main amd64 libgcc-s1-arm64-cross all 14-20240127-1cross1 [43.7 kB] Get:67 http://localhost:3142/debian sid/main amd64 libgomp1-arm64-cross all 14-20240127-1cross1 [116 kB] Get:68 http://localhost:3142/debian sid/main amd64 libitm1-arm64-cross all 14-20240127-1cross1 [23.1 kB] Get:69 http://localhost:3142/debian sid/main amd64 libatomic1-arm64-cross all 14-20240127-1cross1 [9360 B] Get:70 http://localhost:3142/debian sid/main amd64 libasan8-arm64-cross all 14-20240127-1cross1 [2561 kB] Get:71 http://localhost:3142/debian sid/main amd64 liblsan0-arm64-cross all 14-20240127-1cross1 [1155 kB] Get:72 http://localhost:3142/debian sid/main amd64 libtsan2-arm64-cross all 14-20240127-1cross1 [2367 kB] Get:73 http://localhost:3142/debian sid/main amd64 libstdc++6-arm64-cross all 14-20240127-1cross1 [588 kB] Get:74 http://localhost:3142/debian sid/main amd64 libubsan1-arm64-cross all 14-20240127-1cross1 [1034 kB] Get:75 http://localhost:3142/debian sid/main amd64 libhwasan0-arm64-cross all 14-20240127-1cross1 [1386 kB] Get:76 http://localhost:3142/debian sid/main amd64 libgcc-13-dev-arm64-cross all 13.2.0-12cross1 [2231 kB] Get:77 http://localhost:3142/debian sid/main amd64 gcc-13-aarch64-linux-gnu amd64 13.2.0-12cross1 [18.8 MB] Get:78 http://localhost:3142/debian sid/main amd64 gcc-aarch64-linux-gnu amd64 4:13.2.0-7 [1444 B] Get:79 http://localhost:3142/debian sid/main amd64 libc6-dev-arm64-cross all 2.37-12cross1 [1427 kB] Get:80 http://localhost:3142/debian sid/main amd64 libstdc++-13-dev-arm64-cross all 13.2.0-12cross1 [2142 kB] Get:81 http://localhost:3142/debian sid/main amd64 g++-13-aarch64-linux-gnu amd64 13.2.0-12cross1 [10.7 MB] Get:82 http://localhost:3142/debian sid/main amd64 g++-aarch64-linux-gnu amd64 4:13.2.0-7 [1200 B] Get:83 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:84 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:85 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:86 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:87 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:88 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b3 [313 kB] Get:89 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:90 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.31-1 [64.8 kB] Get:91 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:92 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:93 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:94 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:95 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.20 [25.8 kB] Get:96 http://localhost:3142/debian sid/main amd64 crossbuild-essential-arm64 all 12.10 [3484 B] Get:97 http://localhost:3142/debian sid/main amd64 d-shlibs all 0.106 [10.9 kB] Get:98 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get:99 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-7 [517 kB] Get:100 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:101 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:102 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.10-1 [10.6 kB] Get:103 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:104 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:105 http://localhost:3142/debian sid/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get:106 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:107 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get:108 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:109 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:110 http://localhost:3142/debian sid/main amd64 debhelper all 13.15.3 [901 kB] Get:111 http://localhost:3142/debian sid/main amd64 libfakeroot amd64 1.34-1 [28.9 kB] Get:112 http://localhost:3142/debian sid/main amd64 fakeroot amd64 1.34-1 [74.0 kB] Get:113 http://localhost:3142/debian sid/main arm64 gcc-13-base arm64 13.2.0-23 [44.6 kB] Get:114 http://localhost:3142/debian sid/main arm64 gcc-14-base arm64 14-20240330-1 [43.3 kB] Get:115 http://localhost:3142/debian sid/main arm64 hdf5-helpers arm64 1.10.10+repack-3.3 [23.4 kB] Get:116 http://localhost:3142/debian sid/main arm64 libgcc-s1 arm64 14-20240330-1 [43.9 kB] Get:117 http://localhost:3142/debian sid/main arm64 libc6 arm64 2.37-18 [2316 kB] Get:118 http://localhost:3142/debian sid/main arm64 libaec0 arm64 1.1.3-1 [22.1 kB] Get:119 http://localhost:3142/debian sid/main arm64 libsz2 arm64 1.1.3-1 [7664 B] Get:120 http://localhost:3142/debian sid/main arm64 libaec-dev arm64 1.1.3-1 [19.7 kB] Get:121 http://localhost:3142/debian sid/main arm64 libasan8 arm64 14-20240330-1 [2571 kB] Get:122 http://localhost:3142/debian sid/main arm64 libatomic1 arm64 14-20240330-1 [9932 B] Get:123 http://localhost:3142/debian sid/main arm64 libgomp1 arm64 14-20240330-1 [123 kB] Get:124 http://localhost:3142/debian sid/main arm64 libitm1 arm64 14-20240330-1 [23.8 kB] Get:125 http://localhost:3142/debian sid/main arm64 liblsan0 arm64 14-20240330-1 [1156 kB] Get:126 http://localhost:3142/debian sid/main arm64 libtsan2 arm64 14-20240330-1 [2377 kB] Get:127 http://localhost:3142/debian sid/main arm64 libstdc++6 arm64 14-20240330-1 [635 kB] Get:128 http://localhost:3142/debian sid/main arm64 libubsan1 arm64 14-20240330-1 [1035 kB] Get:129 http://localhost:3142/debian sid/main arm64 libhwasan0 arm64 14-20240330-1 [1435 kB] Get:130 http://localhost:3142/debian sid/main arm64 libgcc-13-dev arm64 13.2.0-23 [2235 kB] Get:131 http://localhost:3142/debian sid/main arm64 libcrypt1 arm64 1:4.4.36-4 [90.5 kB] Get:132 http://localhost:3142/debian sid/main arm64 libcrypt-dev arm64 1:4.4.36-4 [121 kB] Get:133 http://localhost:3142/debian sid/main arm64 libc6-dev arm64 2.37-18 [1433 kB] Get:134 http://localhost:3142/debian sid/main arm64 libstdc++-13-dev arm64 13.2.0-23 [2191 kB] Get:135 http://localhost:3142/debian sid/main arm64 libboost1.83-dev arm64 1.83.0-2.1+b1 [10.6 MB] Get:136 http://localhost:3142/debian sid/main arm64 libboost-dev arm64 1.83.0.2+b2 [3828 B] Get:137 http://localhost:3142/debian sid/main arm64 libbrotli1 arm64 1.1.0-2+b3 [295 kB] Get:138 http://localhost:3142/debian sid/main arm64 libbz2-1.0 arm64 1.0.8-5.1 [37.9 kB] Get:139 http://localhost:3142/debian sid/main arm64 libcom-err2 arm64 1.47.0-2.4 [20.1 kB] Get:140 http://localhost:3142/debian sid/main arm64 libgmp10 arm64 2:6.3.0+dfsg-2+b1 [533 kB] Get:141 http://localhost:3142/debian sid/main arm64 libnettle8t64 arm64 3.9.1-2.2 [301 kB] Get:142 http://localhost:3142/debian sid/main arm64 libhogweed6t64 arm64 3.9.1-2.2 [324 kB] Get:143 http://localhost:3142/debian sid/main arm64 libunistring5 arm64 1.2-1 [402 kB] Get:144 http://localhost:3142/debian sid/main arm64 libidn2-0 arm64 2.3.7-2 [127 kB] Get:145 http://localhost:3142/debian sid/main arm64 libffi8 arm64 3.4.6-1 [20.9 kB] Get:146 http://localhost:3142/debian sid/main arm64 libp11-kit0 arm64 0.25.3-4 [400 kB] Get:147 http://localhost:3142/debian sid/main arm64 libtasn1-6 arm64 4.19.0-3+b2 [46.4 kB] Get:148 http://localhost:3142/debian sid/main arm64 libgnutls30t64 arm64 3.8.5-2 [1345 kB] Get:149 http://localhost:3142/debian sid/main arm64 libkrb5support0 arm64 1.20.1-6+b1 [33.0 kB] Get:150 http://localhost:3142/debian sid/main arm64 libk5crypto3 arm64 1.20.1-6+b1 [80.5 kB] Get:151 http://localhost:3142/debian sid/main arm64 libkeyutils1 arm64 1.6.3-3 [9112 B] Get:152 http://localhost:3142/debian sid/main arm64 libzstd1 arm64 1.5.5+dfsg2-2 [256 kB] Get:153 http://localhost:3142/debian sid/main arm64 zlib1g arm64 1:1.3.dfsg-3.1 [83.8 kB] Get:154 http://localhost:3142/debian sid/main arm64 libssl3t64 arm64 3.2.1-3 [2537 kB] Get:155 http://localhost:3142/debian sid/main arm64 libkrb5-3 arm64 1.20.1-6+b1 [315 kB] Get:156 http://localhost:3142/debian sid/main arm64 libgssapi-krb5-2 arm64 1.20.1-6+b1 [124 kB] Get:157 http://localhost:3142/debian sid/main arm64 libdb5.3t64 arm64 5.3.28+dfsg2-7 [625 kB] Get:158 http://localhost:3142/debian sid/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-6 [20.1 kB] Get:159 http://localhost:3142/debian sid/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-6 [55.3 kB] Get:160 http://localhost:3142/debian sid/main arm64 libldap-2.5-0 arm64 2.5.16+dfsg-2 [173 kB] Get:161 http://localhost:3142/debian sid/main arm64 libnghttp2-14 arm64 1.61.0-1+b1 [71.0 kB] Get:162 http://localhost:3142/debian sid/main arm64 libpsl5t64 arm64 0.21.2-1.1 [56.8 kB] Get:163 http://localhost:3142/debian sid/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b4 [56.7 kB] Get:164 http://localhost:3142/debian sid/main arm64 libssh2-1t64 arm64 1.11.0-4.1+b2 [207 kB] Get:165 http://localhost:3142/debian sid/main arm64 libcurl3t64-gnutls arm64 8.7.1-3 [405 kB] Get:166 http://localhost:3142/debian sid/main arm64 libcurl4-gnutls-dev arm64 8.7.1-3 [523 kB] Get:167 http://localhost:3142/debian sid/main arm64 libcurl4t64 arm64 8.7.1-3 [412 kB] Get:168 http://localhost:3142/debian sid/main arm64 libdeflate0 arm64 1.20-1 [41.5 kB] Get:169 http://localhost:3142/debian sid/main arm64 libdeflate-dev arm64 1.20-1 [50.5 kB] Get:170 http://localhost:3142/debian sid/main arm64 libgfortran5 arm64 14-20240330-1 [361 kB] Get:171 http://localhost:3142/debian sid/main arm64 libhdf5-103-1t64 arm64 1.10.10+repack-3.3 [1035 kB] Get:172 http://localhost:3142/debian sid/main arm64 libhdf5-cpp-103-1t64 arm64 1.10.10+repack-3.3 [119 kB] Get:173 http://localhost:3142/debian sid/main arm64 libhdf5-fortran-102t64 arm64 1.10.10+repack-3.3 [88.0 kB] Get:174 http://localhost:3142/debian sid/main arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-3.3 [60.1 kB] Get:175 http://localhost:3142/debian sid/main arm64 libhdf5-hl-fortran-100t64 arm64 1.10.10+repack-3.3 [38.5 kB] Get:176 http://localhost:3142/debian sid/main arm64 libhdf5-hl-cpp-100t64 arm64 1.10.10+repack-3.3 [21.2 kB] Get:177 http://localhost:3142/debian sid/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3.1 [915 kB] Get:178 http://localhost:3142/debian sid/main arm64 libjpeg62-turbo arm64 1:2.1.5-2+b2 [172 kB] Get:179 http://localhost:3142/debian sid/main arm64 libjpeg62-turbo-dev arm64 1:2.1.5-2+b2 [293 kB] Get:180 http://localhost:3142/debian sid/main arm64 libjpeg-dev arm64 1:2.1.5-2+b2 [72.1 kB] Get:181 http://localhost:3142/debian sid/main arm64 libssl-dev arm64 3.2.1-3 [3089 kB] Get:182 http://localhost:3142/debian sid/main arm64 libhdf5-dev arm64 1.10.10+repack-3.3 [2689 kB] Get:183 http://localhost:3142/debian sid/main arm64 libhtscodecs2 arm64 1.6.0-1+b1 [71.6 kB] Get:184 http://localhost:3142/debian sid/main arm64 liblzma5 arm64 5.6.1+really5.4.5-1 [233 kB] Get:185 http://localhost:3142/debian sid/main arm64 libhts3t64 arm64 1.19+ds-1.1+b1 [413 kB] Get:186 http://localhost:3142/debian sid/main arm64 liblzma-dev arm64 5.6.1+really5.4.5-1 [289 kB] Get:187 http://localhost:3142/debian sid/main arm64 libhts-dev arm64 1.19+ds-1.1+b1 [1604 kB] Get:188 http://localhost:3142/debian sid/main arm64 libpbcopper2.3.0 arm64 2.3.0+dfsg-2 [603 kB] Get:189 http://localhost:3142/debian sid/main arm64 libpbbam2.4.0 arm64 2.4.0+dfsg-1+b3 [708 kB] Get:190 http://localhost:3142/debian sid/main arm64 libpbcopper-dev arm64 2.3.0+dfsg-2 [966 kB] Get:191 http://localhost:3142/debian sid/main arm64 libpbbam-dev arm64 2.4.0+dfsg-1+b3 [88.4 kB] Get:192 http://localhost:3142/debian sid/main amd64 libpkgconf3 amd64 1.8.1-1+b2 [36.4 kB] Get:193 http://localhost:3142/debian sid/main amd64 ninja-build amd64 1.11.1-2 [142 kB] Get:194 http://localhost:3142/debian sid/main amd64 python3-pkg-resources all 68.1.2-2 [241 kB] Get:195 http://localhost:3142/debian sid/main amd64 python3-lib2to3 all 3.12.3-1 [77.6 kB] Get:196 http://localhost:3142/debian sid/main amd64 python3-distutils all 3.12.3-1 [131 kB] Get:197 http://localhost:3142/debian sid/main amd64 python3-setuptools all 68.1.2-2 [468 kB] Get:198 http://localhost:3142/debian sid/main amd64 meson all 1.4.0-1 [603 kB] Get:199 http://localhost:3142/debian sid/main amd64 pkgconf-bin amd64 1.8.1-1+b2 [29.7 kB] Get:200 http://localhost:3142/debian sid/main arm64 pkgconf arm64 1.8.1-1+b2 [26.2 kB] Get:201 http://localhost:3142/debian sid/main arm64 pkg-config arm64 1.8.1-1+b2 [14.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 156 MB in 2s (81.5 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 12853 files and directories currently installed.) Preparing to unpack .../liblocale-gettext-perl_1.07-7_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-7) ... Selecting previously unselected package libpython3.11-minimal:amd64. Preparing to unpack .../libpython3.11-minimal_3.11.9-1_amd64.deb ... Unpacking libpython3.11-minimal:amd64 (3.11.9-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.2-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.9-1_amd64.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:amd64 (3.11.9-1) ... Setting up libexpat1:amd64 (2.6.2-1) ... Setting up python3.11-minimal (3.11.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... 13183 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_amd64.deb ... Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package libncursesw6:amd64. Preparing to unpack .../3-libncursesw6_6.4+20240414-1_amd64.deb ... Unpacking libncursesw6:amd64 (6.4+20240414-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../5-libreadline8t64_8.2-4_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-4) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../6-libsqlite3-0_3.45.3-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.45.3-1) ... Selecting previously unselected package libpython3.11-stdlib:amd64. Preparing to unpack .../7-libpython3.11-stdlib_3.11.9-1_amd64.deb ... Unpacking libpython3.11-stdlib:amd64 (3.11.9-1) ... Selecting previously unselected package python3.11. 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Setting up libconfig-inifiles-perl (3.000003-2) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:amd64 (1.5.7-2) ... Setting up libfile-which-perl (1.27-2) ... Setting up libkeyutils1:amd64 (1.6.3-3) ... Setting up libicu72:amd64 (72.1-4+b1) ... Setting up bsdextrautils (2.40-6) ... Setting up hdf5-helpers:arm64 (1.10.10+repack-3.3) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up gcc-14-base:arm64 (14-20240330-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libbrotli1:amd64 (1.1.0-2+b3) ... Setting up libsqlite3-0:amd64 (3.45.3-1) ... Setting up libuv1t64:amd64 (1.48.0-1.1) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up libpsl5t64:amd64 (0.21.2-1.1) ... Setting up libnghttp2-14:amd64 (1.61.0-1+b1) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up binutils-aarch64-linux-gnu (2.42-4) ... 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Setting up libxml2:amd64 (2.9.14+dfsg-1.3+b2) ... Setting up liblocale-gettext-perl (1.07-7) ... Setting up libgcc-s1-arm64-cross (14-20240127-1cross1) ... Setting up libatomic1-arm64-cross (14-20240127-1cross1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up liblsan0-arm64-cross (14-20240127-1cross1) ... Setting up libgomp1-arm64-cross (14-20240127-1cross1) ... Setting up gettext (0.21-14+b1) ... Setting up cpp-13-aarch64-linux-gnu (13.2.0-12cross1) ... Setting up libtool (2.4.7-7) ... Setting up libhwasan0-arm64-cross (14-20240127-1cross1) ... Setting up libc6-dev-arm64-cross (2.37-12cross1) ... Setting up libldap-2.5-0:amd64 (2.5.16+dfsg-2) ... Setting up pkgconf:arm64 (1.8.1-1+b2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libstdc++6-arm64-cross (14-20240127-1cross1) ... Setting up dh-autoreconf (20) ... Setting up cpp-aarch64-linux-gnu (4:13.2.0-7) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-6+b1) ... Setting up pkg-config:arm64 (1.8.1-1+b2) ... Setting up ucf (3.0043+nmu1) ... Setting up libreadline8t64:amd64 (8.2-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-3+b1) ... Setting up libasan8-arm64-cross (14-20240127-1cross1) ... Setting up libarchive13t64:amd64 (3.7.2-2) ... Setting up libtsan2-arm64-cross (14-20240127-1cross1) ... Setting up libubsan1-arm64-cross (14-20240127-1cross1) ... Setting up libcurl4t64:amd64 (8.7.1-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:amd64 (3.11.9-1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-13-dev-arm64-cross (13.2.0-12cross1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up cmake (3.28.3-1+b1) ... Setting up libpython3-stdlib:amd64 (3.11.8-1) ... Setting up python3.11 (3.11.9-1) ... Setting up debhelper (13.15.3) ... Setting up python3 (3.11.8-1) ... Setting up gcc-13-aarch64-linux-gnu (13.2.0-12cross1) ... Setting up libstdc++-13-dev-arm64-cross (13.2.0-12cross1) ... Setting up libxml-simple-perl (2.25-2) ... Setting up python3-lib2to3 (3.12.3-1) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.12.3-1) ... Setting up g++-13-aarch64-linux-gnu (13.2.0-12cross1) ... Setting up gcc-aarch64-linux-gnu (4:13.2.0-7) ... Setting up python3-setuptools (68.1.2-2) ... Setting up meson (1.4.0-1) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up g++-aarch64-linux-gnu (4:13.2.0-7) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-arm64 (12.10) ... Setting up libgcc-s1:arm64 (14-20240330-1) ... Setting up libc6:arm64 (2.37-18) ... Setting up libdb5.3t64:arm64 (5.3.28+dfsg2-7) ... Setting up libffi8:arm64 (3.4.6-1) ... Setting up libhwasan0:arm64 (14-20240330-1) ... Setting up libasan8:arm64 (14-20240330-1) ... Setting up libtasn1-6:arm64 (4.19.0-3+b2) ... Setting up libtsan2:arm64 (14-20240330-1) ... Setting up libbz2-1.0:arm64 (1.0.8-5.1) ... Setting up libstdc++6:arm64 (14-20240330-1) ... Setting up liblsan0:arm64 (14-20240330-1) ... Setting up libitm1:arm64 (14-20240330-1) ... Setting up libpbcopper2.3.0:arm64 (2.3.0+dfsg-2) ... Setting up libhtscodecs2:arm64 (1.6.0-1+b1) ... Setting up libzstd1:arm64 (1.5.5+dfsg2-2) ... Setting up libkeyutils1:arm64 (1.6.3-3) ... Setting up liblzma5:arm64 (5.6.1+really5.4.5-1) ... Setting up libbrotli1:arm64 (1.1.0-2+b3) ... Setting up libnghttp2-14:arm64 (1.61.0-1+b1) ... Setting up libdeflate0:arm64 (1.20-1) ... Setting up zlib1g:arm64 (1:1.3.dfsg-3.1) ... Setting up libcrypt1:arm64 (1:4.4.36-4) ... Setting up libcom-err2:arm64 (1.47.0-2.4) ... Setting up libgomp1:arm64 (14-20240330-1) ... Setting up libaec0:arm64 (1.1.3-1) ... Setting up libkrb5support0:arm64 (1.20.1-6+b1) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-6) ... Setting up libnettle8t64:arm64 (3.9.1-2.2) ... Setting up libjpeg62-turbo:arm64 (1:2.1.5-2+b2) ... Setting up libgmp10:arm64 (2:6.3.0+dfsg-2+b1) ... Setting up libp11-kit0:arm64 (0.25.3-4) ... Setting up libunistring5:arm64 (1.2-1) ... Setting up libatomic1:arm64 (14-20240330-1) ... Setting up libpbcopper-dev:arm64 (2.3.0+dfsg-2) ... Setting up libk5crypto3:arm64 (1.20.1-6+b1) ... Setting up libgfortran5:arm64 (14-20240330-1) ... Setting up liblzma-dev:arm64 (5.6.1+really5.4.5-1) ... Setting up libubsan1:arm64 (14-20240330-1) ... Setting up libhogweed6t64:arm64 (3.9.1-2.2) ... Setting up libgcc-13-dev:arm64 (13.2.0-23) ... Setting up libcrypt-dev:arm64 (1:4.4.36-4) ... Setting up libc6-dev:arm64 (2.37-18) ... Setting up libdeflate-dev:arm64 (1.20-1) ... Setting up libsz2:arm64 (1.1.3-1) ... Setting up libstdc++-13-dev:arm64 (13.2.0-23) ... Setting up libboost1.83-dev:arm64 (1.83.0-2.1+b1) ... Setting up libssl3t64:arm64 (3.2.1-3) ... Setting up libaec-dev:arm64 (1.1.3-1) ... Setting up libidn2-0:arm64 (2.3.7-2) ... Setting up libjpeg62-turbo-dev:arm64 (1:2.1.5-2+b2) ... Setting up libssl-dev:arm64 (3.2.1-3) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-6) ... Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3.1) ... Setting up libkrb5-3:arm64 (1.20.1-6+b1) ... Setting up libboost-dev:arm64 (1.83.0.2+b2) ... Setting up libssh2-1t64:arm64 (1.11.0-4.1+b2) ... Setting up libgnutls30t64:arm64 (3.8.5-2) ... Setting up libpsl5t64:arm64 (0.21.2-1.1) ... Setting up libjpeg-dev:arm64 (1:2.1.5-2+b2) ... Setting up libldap-2.5-0:arm64 (2.5.16+dfsg-2) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libgssapi-krb5-2:arm64 (1.20.1-6+b1) ... Setting up libcurl4t64:arm64 (8.7.1-3) ... Setting up libcurl3t64-gnutls:arm64 (8.7.1-3) ... Setting up libcurl4-gnutls-dev:arm64 (8.7.1-3) ... Setting up libhts3t64:arm64 (1.19+ds-1.1+b1) ... Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-3.3) ... Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-3.3) ... Setting up libpbbam2.4.0:arm64 (2.4.0+dfsg-1+b3) ... Setting up libhdf5-cpp-103-1t64:arm64 (1.10.10+repack-3.3) ... Setting up libhts-dev:arm64 (1.19+ds-1.1+b1) ... Setting up libhdf5-fortran-102t64:arm64 (1.10.10+repack-3.3) ... Setting up libpbbam-dev:arm64 (2.4.0+dfsg-1+b3) ... Setting up libhdf5-hl-cpp-100t64:arm64 (1.10.10+repack-3.3) ... Setting up libhdf5-hl-fortran-100t64:arm64 (1.10.10+repack-3.3) ... Setting up libhdf5-dev:arm64 (1.10.10+repack-3.3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.37-18) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-20-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.85-1 (2024-04-11) amd64 (x86_64) Toolchain package versions: binutils_2.42-4 dpkg-dev_1.22.6 g++-13_13.2.0-23 gcc-13_13.2.0-23 libc6-dev_2.37-18 libstdc++-13-dev_13.2.0-23 libstdc++-13-dev-arm64-cross_13.2.0-12cross1 libstdc++6_14-20240330-1 libstdc++6-arm64-cross_14-20240127-1cross1 linux-libc-dev_6.7.9-2 Package versions: adduser_3.137 apt_2.9.1 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-14 autotools-dev_20220109.1 base-files_13.1 base-passwd_3.6.3 bash_5.2.21-2 binutils_2.42-4 binutils-aarch64-linux-gnu_2.42-4 binutils-common_2.42-4 binutils-x86-64-linux-gnu_2.42-4 bsdextrautils_2.40-6 bsdutils_1:2.40-6 build-essential_12.10 bzip2_1.0.8-5.1 cmake_3.28.3-1+b1 cmake-data_3.28.3-1 coreutils_9.4-3.1 cpp_4:13.2.0-7 cpp-13_13.2.0-23 cpp-13-aarch64-linux-gnu_13.2.0-12cross1 cpp-13-x86-64-linux-gnu_13.2.0-23 cpp-aarch64-linux-gnu_4:13.2.0-7 cpp-x86-64-linux-gnu_4:13.2.0-7 cross-config_2.6.20 crossbuild-essential-arm64_12.10 d-shlibs_0.106 dash_0.5.12-6 debconf_1.5.86 debhelper_13.15.3 debian-archive-keyring_2023.4 debianutils_5.17 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dpkg_1.22.6 dpkg-cross_2.6.20 dpkg-dev_1.22.6 dwz_0.15-1+b1 fakeroot_1.34-1 file_1:5.45-3 findutils_4.9.0-5 g++_4:13.2.0-7 g++-13_13.2.0-23 g++-13-aarch64-linux-gnu_13.2.0-12cross1 g++-13-x86-64-linux-gnu_13.2.0-23 g++-aarch64-linux-gnu_4:13.2.0-7 g++-x86-64-linux-gnu_4:13.2.0-7 gcc_4:13.2.0-7 gcc-13_13.2.0-23 gcc-13-aarch64-linux-gnu_13.2.0-12cross1 gcc-13-aarch64-linux-gnu-base_13.2.0-12cross1 gcc-13-base_13.2.0-23 gcc-13-cross-base_13.2.0-12cross1 gcc-13-x86-64-linux-gnu_13.2.0-23 gcc-14-base_14-20240330-1 gcc-14-cross-base_14-20240127-1cross1 gcc-aarch64-linux-gnu_4:13.2.0-7 gcc-x86-64-linux-gnu_4:13.2.0-7 gettext_0.21-14+b1 gettext-base_0.21-14+b1 gpgv_2.2.40-3 grep_3.11-4 groff-base_1.23.0-3+b1 gzip_1.12-1.1 hdf5-helpers_1.10.10+repack-3.3 hostname_3.23+nmu2 init-system-helpers_1.66 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-1 libaec-dev_1.1.3-1 libaec0_1.1.3-1 libapt-pkg6.0t64_2.9.1 libarchive-zip-perl_1.68-1 libarchive13t64_3.7.2-2 libasan8_14-20240330-1 libasan8-arm64-cross_14-20240127-1cross1 libatomic1_14-20240330-1 libatomic1-arm64-cross_14-20240127-1cross1 libattr1_1:2.5.2-1 libaudit-common_1:3.1.2-2.1 libaudit1_1:3.1.2-2.1 libbinutils_2.42-4 libblkid1_2.40-6 libboost-dev_1.83.0.2+b2 libboost1.83-dev_1.83.0-2.1+b1 libbrotli1_1.1.0-2+b3 libbz2-1.0_1.0.8-5.1 libc-bin_2.37-18 libc-dev-bin_2.37-18 libc6_2.37-18 libc6-arm64-cross_2.37-12cross1 libc6-dev_2.37-18 libc6-dev-arm64-cross_2.37-12cross1 libcap-ng0_0.8.5-1 libcap2_1:2.66-5 libcc1-0_14-20240330-1 libcom-err2_1.47.0-2.4 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-2 libcrypt-dev_1:4.4.36-4 libcrypt1_1:4.4.36-4 libctf-nobfd0_2.42-4 libctf0_2.42-4 libcurl3t64-gnutls_8.7.1-3 libcurl4-gnutls-dev_8.7.1-3 libcurl4t64_8.7.1-3 libdb5.3t64_5.3.28+dfsg2-7 libdebconfclient0_0.271+b3 libdebhelper-perl_13.15.3 libdebian-dpkgcross-perl_2.6.20 libdeflate-dev_1.20-1 libdeflate0_1.20-1 libdpkg-perl_1.22.6 libelf1t64_0.191-1+b1 libexpat1_2.6.2-1 libfakeroot_1.34-1 libffi8_3.4.6-1 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.13.1-1 libfile-which-perl_1.27-2 libgcc-13-dev_13.2.0-23 libgcc-13-dev-arm64-cross_13.2.0-12cross1 libgcc-s1_14-20240330-1 libgcc-s1-arm64-cross_14-20240127-1cross1 libgcrypt20_1.10.3-2 libgdbm-compat4t64_1.23-5.1+b1 libgdbm6t64_1.23-5.1+b1 libgfortran5_14-20240330-1 libgmp10_2:6.3.0+dfsg-2+b1 libgnutls30t64_3.8.5-2 libgomp1_14-20240330-1 libgomp1-arm64-cross_14-20240127-1cross1 libgpg-error0_1.47-3 libgprofng0_2.42-4 libgssapi-krb5-2_1.20.1-6+b1 libhdf5-103-1t64_1.10.10+repack-3.3 libhdf5-cpp-103-1t64_1.10.10+repack-3.3 libhdf5-dev_1.10.10+repack-3.3 libhdf5-fortran-102t64_1.10.10+repack-3.3 libhdf5-hl-100t64_1.10.10+repack-3.3 libhdf5-hl-cpp-100t64_1.10.10+repack-3.3 libhdf5-hl-fortran-100t64_1.10.10+repack-3.3 libhogweed6t64_3.9.1-2.2 libhts-dev_1.19+ds-1.1+b1 libhts3t64_1.19+ds-1.1+b1 libhtscodecs2_1.6.0-1+b1 libhwasan0_14-20240330-1 libhwasan0-arm64-cross_14-20240127-1cross1 libicu72_72.1-4+b1 libidn2-0_2.3.7-2 libio-string-perl_1.08-4 libisl23_0.26-3+b2 libitm1_14-20240330-1 libitm1-arm64-cross_14-20240127-1cross1 libjansson4_2.14-2+b2 libjpeg-dev_1:2.1.5-2+b2 libjpeg62-turbo_1:2.1.5-2+b2 libjpeg62-turbo-dev_1:2.1.5-2+b2 libjsoncpp25_1.9.5-6+b2 libk5crypto3_1.20.1-6+b1 libkeyutils1_1.6.3-3 libkrb5-3_1.20.1-6+b1 libkrb5support0_1.20.1-6+b1 libldap-2.5-0_2.5.16+dfsg-2 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libseccomp2_2.5.5-1 libselinux1_3.5-2+b2 libsemanage-common_3.5-1 libsemanage2_3.5-1+b3 libsepol2_3.5-2 libsframe1_2.42-4 libsmartcols1_2.40-6 libsqlite3-0_3.45.3-1 libssh2-1t64_1.11.0-4.1+b2 libssl-dev_3.2.1-3 libssl3t64_3.2.1-3 libstdc++-13-dev_13.2.0-23 libstdc++-13-dev-arm64-cross_13.2.0-12cross1 libstdc++6_14-20240330-1 libstdc++6-arm64-cross_14-20240127-1cross1 libsub-override-perl_0.10-1 libsystemd0_255.4-1+b1 libsz2_1.1.3-1 libtasn1-6_4.19.0-3+b2 libtinfo6_6.4+20240414-1 libtool_2.4.7-7 libtsan2_14-20240330-1 libtsan2-arm64-cross_14-20240127-1cross1 libubsan1_14-20240330-1 libubsan1-arm64-cross_14-20240127-1cross1 libuchardet0_0.0.8-1+b1 libudev1_255.4-1+b1 libunistring5_1.2-1 libuuid1_2.40-6 libuv1t64_1.48.0-1.1 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b3 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-2 libxml2_2.9.14+dfsg-1.3+b2 libxxhash0_0.8.2-2+b1 libyaml-perl_1.31-1 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.7.9-2 login_1:4.13+dfsg1-4 m4_1.4.19-4 make_4.3-4.1 man-db_2.12.1-1 mawk_1.3.4.20240123-1 media-types_10.1.0 meson_1.4.0-1 mount_2.40-6 ncurses-base_6.4+20240414-1 ncurses-bin_6.4+20240414-1 netbase_6.4 ninja-build_1.11.1-2 passwd_1:4.13+dfsg1-4 patch_2.7.6-7 perl_5.38.2-3.2+b2 perl-base_5.38.2-3.2+b2 perl-modules-5.38_5.38.2-3.2 pkg-config_1.8.1-1+b2 pkgconf_1.8.1-1+b2 pkgconf-bin_1.8.1-1+b2 po-debconf_1.0.21+nmu1 procps_2:4.0.4-4 python3_3.11.8-1 python3-distutils_3.12.3-1 python3-lib2to3_3.12.3-1 python3-minimal_3.11.8-1 python3-pkg-resources_68.1.2-2 python3-setuptools_68.1.2-2 python3.11_3.11.9-1 python3.11-minimal_3.11.9-1 readline-common_8.2-4 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.22 sysvinit-utils_3.09-1 tar_1.35+dfsg-3 tzdata_2024a-3 ucf_3.0043+nmu1 usr-is-merged_39 util-linux_2.40-6 xz-utils_5.6.1+really5.4.5-1 zlib1g_1:1.3.dfsg-3.1 zlib1g-dev_1:1.3.dfsg-3.1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: pbseqlib Binary: libblasr-dev, libblasr5.3.5, libpbseq, libpbseq-dev, libpbdata-dev, libpbihdf-dev Architecture: any Version: 5.3.5+dfsg-6 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/PacificBiosciences/blasr_libcpp Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/pbseqlib Vcs-Git: https://salsa.debian.org/med-team/pbseqlib.git Build-Depends: debhelper-compat (= 13), d-shlibs, meson, pkg-config, cmake, googletest , libgtest-dev , zlib1g-dev, libhdf5-dev, libboost-dev, libpbbam-dev (>> 2.3.0), libpbcopper-dev (>> 2.2.0), libhts-dev Package-List: libblasr-dev deb libdevel optional arch=any libblasr5.3.5 deb libs optional arch=any libpbdata-dev deb libdevel optional arch=any libpbihdf-dev deb libdevel optional arch=any libpbseq deb science optional arch=any libpbseq-dev deb libdevel optional arch=any Checksums-Sha1: 52e008afcd7a07d4df0a18e2299c8b8e7c480e91 973104 pbseqlib_5.3.5+dfsg.orig.tar.xz 89b7c4e78f918c24e79b106067f0ad1887d9b639 11736 pbseqlib_5.3.5+dfsg-6.debian.tar.xz Checksums-Sha256: 81afecd5d7ccb3cd70ed42cd8afa64876fde4c0deee89e1112c7f3b3d6ee8c49 973104 pbseqlib_5.3.5+dfsg.orig.tar.xz d8492bad067709139926f1fd9c0c0e6b081e5d8c4168104fb7aadb68ba79eb44 11736 pbseqlib_5.3.5+dfsg-6.debian.tar.xz Files: 53cbc19d8c807640dafbd04fcc47f86e 973104 pbseqlib_5.3.5+dfsg.orig.tar.xz d38db4d8c7c892de9d8702f4be2985eb 11736 pbseqlib_5.3.5+dfsg-6.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmTlAwEACgkQPCZ2P2xn 5uJMyBAAuhKRJRXQBizUPXMeEtELO2UNqzo0b0uiHzKiXxXXGUhrHp08AJpHoi7U dpx16SD5rt/uyB60NETkkV2H/FnjXT8I26wDbCrZ8Q4fnI96vRUj1++0weBYuimY 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info: unpacking pbseqlib_5.3.5+dfsg-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hdf5-1.10.1-support.patch dpkg-source: info: applying hdf5-1.10.0-support.patch dpkg-source: info: applying meson.patch dpkg-source: info: applying static+shared_lib.patch dpkg-source: info: applying gcc-13.patch dpkg-source: info: applying pbbam_2.3.0 Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.arm64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.4et6uOSAZp/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-45e7c721-b9cd-4817-b270-951cd0dc2696 SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa XDG_SESSION_CLASS=user dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aarm64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package pbseqlib dpkg-buildpackage: info: source version 5.3.5+dfsg-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-architecture: warning: specified GNU system type aarch64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean find -name defines.mk -delete rm -f pbdata/libconfig.h make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb LC_ALL=C.UTF-8 meson setup .. --wrap-mode=nodownload --buildtype=plain --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/aarch64-linux-gnu -Dpython.bytecompile=-1 --cross-file /<>/pbseqlib-5.3.5\+dfsg/debian/.debhelper/generated/_source/meson-cross-file.conf DEPRECATION: "pkgconfig" entry is deprecated and should be replaced by "pkg-config" DEPRECATION: c_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. DEPRECATION: cpp_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. DEPRECATION: c_link_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. DEPRECATION: cpp_link_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. The Meson build system Version: 1.4.0 Source dir: /<> Build dir: /<>/obj-aarch64-linux-gnu Build type: cross build Project name: libblasr Project version: 5.3.5 C++ compiler for the host machine: /usr/bin/aarch64-linux-gnu-g++ (gcc 13.2.0 "aarch64-linux-gnu-g++ (Debian 13.2.0-12) 13.2.0") C++ linker for the host machine: /usr/bin/aarch64-linux-gnu-g++ ld.bfd 2.42 C++ compiler for the build machine: c++ (gcc 13.2.0 "c++ (Debian 13.2.0-23) 13.2.0") C++ linker for the build machine: c++ ld.bfd 2.42 Build machine cpu family: x86_64 Build machine cpu: x86_64 Host machine cpu family: aarch64 Host machine cpu: arm64 Target machine cpu family: aarch64 Target machine cpu: arm64 Compiler for C++ supports arguments -Wno-delete-non-virtual-dtor: YES Compiler for C++ supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-non-virtual-dtor: YES Found pkg-config: YES (/usr/bin/aarch64-linux-gnu-pkg-config) 1.8.1 Run-time dependency Boost found: YES 1.83.0 (/usr/include) Run-time dependency pbbam found: YES 2.4.0 Run-time dependency zlib found: YES 1.3 Run-time dependency htslib found: YES 1.19 Library rt found: YES Run-time dependency HDF5 for cpp found: YES 1.10.10 Configuring LibBlasrConfig.h using configuration Program tools/check-formatting found: YES (/<>/tools/check-formatting) Run-time dependency GTest found: NO (tried pkgconfig and system) Looking for a fallback subproject for the dependency gtest ../unittest/meson.build:15:21: ERROR: Automatic wrap-based subproject downloading is disabled A full log can be found at /<>/obj-aarch64-linux-gnu/meson-logs/meson-log.txt cd obj-aarch64-linux-gnu && tail -v -n \+0 meson-logs/meson-log.txt ==> meson-logs/meson-log.txt <== Build started at 2024-04-20T19:59:43.140926 Main binary: /usr/bin/python3 Build Options: -Dpython.bytecompile=-1 -Dprefix=/usr -Dlibdir=lib/aarch64-linux-gnu -Dlocalstatedir=/var -Dsysconfdir=/etc -Dbuildtype=plain -Dwrap_mode=nodownload --cross-file=/<>/debian/.debhelper/generated/_source/meson-cross-file.conf Python system: Linux The Meson build system Version: 1.4.0 Source dir: /<> Build dir: /<>/obj-aarch64-linux-gnu Build type: cross build Project name: libblasr Project version: 5.3.5 ----------- Detecting compiler via: `/usr/bin/aarch64-linux-gnu-g++ --version` -> 0 stdout: aarch64-linux-gnu-g++ (Debian 13.2.0-12) 13.2.0 Copyright (C) 2023 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. ----------- Running command: /usr/bin/aarch64-linux-gnu-g++ -E -dM - ----- ----------- Detecting linker via: `/usr/bin/aarch64-linux-gnu-g++ -Wl,--version -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro -Wl,-z,now` -> 0 stdout: GNU ld (GNU Binutils for Debian) 2.42 Copyright (C) 2024 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) a later version. This program has absolutely no warranty. ----------- stderr: collect2 version 13.2.0 /usr/lib/gcc-cross/aarch64-linux-gnu/13/../../../../aarch64-linux-gnu/bin/ld -plugin /usr/libexec/gcc-cross/aarch64-linux-gnu/13/liblto_plugin.so -plugin-opt=/usr/libexec/gcc-cross/aarch64-linux-gnu/13/lto-wrapper -plugin-opt=-fresolution=/tmp/ccWG0dMW.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --sysroot=/ --build-id --eh-frame-hdr --hash-style=gnu --as-needed -dynamic-linker /lib/ld-linux-aarch64.so.1 -X -EL -maarch64linux --fix-cortex-a53-843419 -pie /usr/lib/gcc-cross/aarch64-linux-gnu/13/../../../../aarch64-linux-gnu/lib/../lib/Scrt1.o /usr/lib/gcc-cross/aarch64-linux-gnu/13/../../../../aarch64-linux-gnu/lib/../lib/crti.o /usr/lib/gcc-cross/aarch64-linux-gnu/13/crtbeginS.o -L/usr/lib/gcc-cross/aarch64-linux-gnu/13 -L/usr/lib/gcc-cross/aarch64-linux-gnu/13/../../../../aarch64-linux-gnu/lib/../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc-cross/aarch64-linux-gnu/13/../../../../aarch64-linux-gnu/lib --version -z relro -z now -lstdc++ -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc-cross/aarch64-linux-gnu/13/crtendS.o /usr/lib/gcc-cross/aarch64-linux-gnu/13/../../../../aarch64-linux-gnu/lib/../lib/crtn.o ----------- Sanity testing C++ compiler: /usr/bin/aarch64-linux-gnu-g++ Is cross compiler: True. Sanity check compiler command line: /usr/bin/aarch64-linux-gnu-g++ sanitycheckcpp.cc -o sanitycheckcpp_cross.exe -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -D_FILE_OFFSET_BITS=64 -c Sanity check compile stdout: ----- Sanity check compile stderr: ----- C++ compiler for the host machine: /usr/bin/aarch64-linux-gnu-g++ (gcc 13.2.0 "aarch64-linux-gnu-g++ (Debian 13.2.0-12) 13.2.0") C++ linker for the host machine: /usr/bin/aarch64-linux-gnu-g++ ld.bfd 2.42 ----------- Detecting archiver via: `/usr/bin/aarch64-linux-gnu-ar --version` -> 0 stdout: GNU ar (GNU Binutils for Debian) 2.42 Copyright (C) 2024 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. ----------- ----------- Detecting compiler via: `c++ --version` -> 0 stdout: c++ (Debian 13.2.0-23) 13.2.0 Copyright (C) 2023 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. ----------- Running command: c++ -E -dM - ----- ----------- Detecting linker via: `c++ -Wl,--version -g -O2` -> 0 stdout: GNU ld (GNU Binutils for Debian) 2.42 Copyright (C) 2024 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) a later version. This program has absolutely no warranty. ----------- stderr: collect2 version 13.2.0 /usr/bin/ld -plugin /usr/libexec/gcc/x86_64-linux-gnu/13/liblto_plugin.so -plugin-opt=/usr/libexec/gcc/x86_64-linux-gnu/13/lto-wrapper -plugin-opt=-fresolution=/tmp/ccyJZM66.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu --as-needed -dynamic-linker /lib64/ld-linux-x86-64.so.2 -pie /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/Scrt1.o /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/13/crtbeginS.o -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. --version -lstdc++ -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/13/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/crtn.o ----------- Sanity testing C++ compiler: c++ Is cross compiler: False. Sanity check compiler command line: c++ sanitycheckcpp.cc -o sanitycheckcpp.exe -g -O2 -D_FILE_OFFSET_BITS=64 Sanity check compile stdout: ----- Sanity check compile stderr: ----- Running test binary command: /<>/obj-aarch64-linux-gnu/meson-private/sanitycheckcpp.exe C++ compiler for the build machine: c++ (gcc 13.2.0 "c++ (Debian 13.2.0-23) 13.2.0") C++ linker for the build machine: c++ ld.bfd 2.42 ----------- Detecting archiver via: `gcc-ar --version` -> 0 stdout: GNU ar (GNU Binutils for Debian) 2.42 Copyright (C) 2024 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. ----------- Build machine cpu family: x86_64 Build machine cpu: x86_64 Host machine cpu family: aarch64 Host machine cpu: arm64 Target machine cpu family: aarch64 Target machine cpu: arm64 Running compile: Working directory: /<>/obj-aarch64-linux-gnu/meson-private/tmpgib93ipr Code: extern int i; int i; ----------- Command line: `/usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial /<>/obj-aarch64-linux-gnu/meson-private/tmpgib93ipr/testfile.cpp -o /<>/obj-aarch64-linux-gnu/meson-private/tmpgib93ipr/output.obj -c -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -D_FILE_OFFSET_BITS=64 -O0 -fpermissive -Wdelete-non-virtual-dtor -Wno-delete-non-virtual-dtor` -> 0 Compiler for C++ supports arguments -Wno-delete-non-virtual-dtor: YES Running compile: Working directory: /<>/obj-aarch64-linux-gnu/meson-private/tmp0uw3g5cp Code: extern int i; int i; ----------- Command line: `/usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial /<>/obj-aarch64-linux-gnu/meson-private/tmp0uw3g5cp/testfile.cpp -o /<>/obj-aarch64-linux-gnu/meson-private/tmp0uw3g5cp/output.obj -c -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -D_FILE_OFFSET_BITS=64 -O0 -fpermissive -Wunused-variable -Wno-unused-variable` -> 0 Compiler for C++ supports arguments -Wno-unused-variable: YES Running compile: Working directory: /<>/obj-aarch64-linux-gnu/meson-private/tmpgq_yj0mt Code: extern int i; int i; ----------- Command line: `/usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial /<>/obj-aarch64-linux-gnu/meson-private/tmpgq_yj0mt/testfile.cpp -o /<>/obj-aarch64-linux-gnu/meson-private/tmpgq_yj0mt/output.obj -c -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -D_FILE_OFFSET_BITS=64 -O0 -fpermissive -Wnon-virtual-dtor -Wno-non-virtual-dtor` -> 0 Compiler for C++ supports arguments -Wno-non-virtual-dtor: YES Pkg-config binary for host machine specified from cross file, native file, or env var as ['/usr/bin/aarch64-linux-gnu-pkg-config'] Found pkg-config: YES (/usr/bin/aarch64-linux-gnu-pkg-config) 1.8.1 Determining dependency 'boost' with pkg-config executable '/usr/bin/aarch64-linux-gnu-pkg-config' env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/aarch64-linux-gnu-pkg-config ----------- Called: `/usr/bin/aarch64-linux-gnu-pkg-config --modversion boost` -> 1 stderr: Package boost was not found in the pkg-config search path. Perhaps you should add the directory containing `boost.pc' to the PKG_CONFIG_PATH environment variable Package 'boost', required by 'virtual:world', not found ----------- Checking potential boost root /usr/aarch64-linux-gnu/include/c++ Checking potential boost root /usr/aarch64-linux-gnu/include/c++/13 Checking potential boost root /usr/lib/gcc-cross/aarch64-linux-gnu/13 Checking potential boost root /usr/aarch64-linux-gnu Checking potential boost root /usr/include Running compile: Working directory: /<>/obj-aarch64-linux-gnu/meson-private/tmpthvl03qp Code: ----------- Command line: `/usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial /<>/obj-aarch64-linux-gnu/meson-private/tmpthvl03qp/testfile.cpp -o /<>/obj-aarch64-linux-gnu/meson-private/tmpthvl03qp/output.obj -c -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -D_FILE_OFFSET_BITS=64 -O0 -fpermissive --print-search-dirs` -> 0 stdout: install: /usr/lib/gcc-cross/aarch64-linux-gnu/13/ programs: =/usr/libexec/gcc-cross/aarch64-linux-gnu/13/:/usr/libexec/gcc-cross/aarch64-linux-gnu/13/:/usr/libexec/gcc-cross/aarch64-linux-gnu/:/usr/lib/gcc-cross/aarch64-linux-gnu/13/:/usr/lib/gcc-cross/aarch64-linux-gnu/:/usr/lib/gcc-cross/aarch64-linux-gnu/13/../../../../aarch64-linux-gnu/bin/aarch64-linux-gnu/13/:/usr/lib/gcc-cross/aarch64-linux-gnu/13/../../../../aarch64-linux-gnu/bin/aarch64-linux-gnu/:/usr/lib/gcc-cross/aarch64-linux-gnu/13/../../../../aarch64-linux-gnu/bin/ libraries: =/usr/lib/gcc-cross/aarch64-linux-gnu/13/:/usr/lib/gcc-cross/aarch64-linux-gnu/13/../../../../aarch64-linux-gnu/lib/aarch64-linux-gnu/13/:/usr/lib/gcc-cross/aarch64-linux-gnu/13/../../../../aarch64-linux-gnu/lib/aarch64-linux-gnu/:/usr/lib/gcc-cross/aarch64-linux-gnu/13/../../../../aarch64-linux-gnu/lib/../lib/:/lib/aarch64-linux-gnu/13/:/lib/aarch64-linux-gnu/:/lib/../lib/:/usr/lib/aarch64-linux-gnu/13/:/usr/lib/aarch64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc-cross/aarch64-linux-gnu/13/../../../../aarch64-linux-gnu/lib/:/lib/:/usr/lib/ ----------- - potential library dirs: [] - potential include dirs: ['/usr/include'] - found boost 1.83.0 include dir: /usr/include - filtered library list: - found: - final compile args: ['-I/usr/include', '-DBOOST_ALL_NO_LIB'] - final link args: [] Run-time dependency Boost found: YES 1.83.0 (/usr/include) Determining dependency 'pbbam' with pkg-config executable '/usr/bin/aarch64-linux-gnu-pkg-config' env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/aarch64-linux-gnu-pkg-config ----------- Called: `/usr/bin/aarch64-linux-gnu-pkg-config --modversion pbbam` -> 0 stdout: 2.4.0 ----------- env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/aarch64-linux-gnu-pkg-config ----------- Called: `/usr/bin/aarch64-linux-gnu-pkg-config --cflags pbbam` -> 0 env[PKG_CONFIG_ALLOW_SYSTEM_LIBS]: 1 env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/aarch64-linux-gnu-pkg-config ----------- Called: `/usr/bin/aarch64-linux-gnu-pkg-config --libs pbbam` -> 0 stdout: -L/usr/lib/aarch64-linux-gnu -lpbbam -lpbcopper ----------- env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/aarch64-linux-gnu-pkg-config ----------- Called: `/usr/bin/aarch64-linux-gnu-pkg-config --libs pbbam` -> 0 stdout: -lpbbam -lpbcopper ----------- Running compile: Working directory: /<>/obj-aarch64-linux-gnu/meson-private/tmpgwq7f26w Code: #include int main(void) { void * something; return 0; } ----------- Command line: `/usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial /<>/obj-aarch64-linux-gnu/meson-private/tmpgwq7f26w/testfile.cpp -o /<>/obj-aarch64-linux-gnu/meson-private/tmpgwq7f26w/output.obj -c -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -D_FILE_OFFSET_BITS=64 -O0 -fpermissive` -> 0 Running compile: Working directory: /<>/obj-aarch64-linux-gnu/meson-private/tmpsg16t_ce Code: #include int main(void) { static int a[1-2*!(sizeof(void *) >= 0)]; a[0]=0; return 0; } ----------- Command line: `/usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial /<>/obj-aarch64-linux-gnu/meson-private/tmpsg16t_ce/testfile.cpp -o /<>/obj-aarch64-linux-gnu/meson-private/tmpsg16t_ce/output.obj -c -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -D_FILE_OFFSET_BITS=64 -O0 -fpermissive` -> 0 Running compile: Working directory: /<>/obj-aarch64-linux-gnu/meson-private/tmpt2tkhrtp Code: #include int main(void) { static int a[1-2*!(sizeof(void *) > 0)]; a[0]=0; return 0; } ----------- Command line: `/usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial /<>/obj-aarch64-linux-gnu/meson-private/tmpt2tkhrtp/testfile.cpp -o /<>/obj-aarch64-linux-gnu/meson-private/tmpt2tkhrtp/output.obj -c -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -D_FILE_OFFSET_BITS=64 -O0 -fpermissive` -> 0 Running compile: Working directory: /<>/obj-aarch64-linux-gnu/meson-private/tmpbz3hl52m Code: #include int main(void) { static int a[1-2*!(sizeof(void *) > 1)]; a[0]=0; return 0; } ----------- Command line: `/usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial /<>/obj-aarch64-linux-gnu/meson-private/tmpbz3hl52m/testfile.cpp -o /<>/obj-aarch64-linux-gnu/meson-private/tmpbz3hl52m/output.obj -c -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -D_FILE_OFFSET_BITS=64 -O0 -fpermissive` -> 0 Running compile: Working directory: /<>/obj-aarch64-linux-gnu/meson-private/tmpk33gf3e_ Code: #include int main(void) { static int a[1-2*!(sizeof(void *) > 3)]; a[0]=0; return 0; } ----------- Command line: `/usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial /<>/obj-aarch64-linux-gnu/meson-private/tmpk33gf3e_/testfile.cpp -o /<>/obj-aarch64-linux-gnu/meson-private/tmpk33gf3e_/output.obj -c -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -D_FILE_OFFSET_BITS=64 -O0 -fpermissive` -> 0 Running compile: Working directory: /<>/obj-aarch64-linux-gnu/meson-private/tmpiv43h8pc Code: #include int main(void) { static int a[1-2*!(sizeof(void *) > 7)]; a[0]=0; return 0; } ----------- Command line: `/usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial /<>/obj-aarch64-linux-gnu/meson-private/tmpiv43h8pc/testfile.cpp -o /<>/obj-aarch64-linux-gnu/meson-private/tmpiv43h8pc/output.obj -c -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -D_FILE_OFFSET_BITS=64 -O0 -fpermissive` -> 0 Running compile: Working directory: /<>/obj-aarch64-linux-gnu/meson-private/tmpgg6y7n5s Code: #include int main(void) { static int a[1-2*!(sizeof(void *) > 15)]; a[0]=0; return 0; } ----------- Command line: `/usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial /<>/obj-aarch64-linux-gnu/meson-private/tmpgg6y7n5s/testfile.cpp -o /<>/obj-aarch64-linux-gnu/meson-private/tmpgg6y7n5s/output.obj -c -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -D_FILE_OFFSET_BITS=64 -O0 -fpermissive` -> 1 stderr: /<>/obj-aarch64-linux-gnu/meson-private/tmpgg6y7n5s/testfile.cpp: In function 'int main()': /<>/obj-aarch64-linux-gnu/meson-private/tmpgg6y7n5s/testfile.cpp:3:65: error: narrowing conversion of '-1' from 'int' to 'long unsigned int' [-Wnarrowing] 3 | int main(void) { static int a[1-2*!(sizeof(void *) > 15)]; a[0]=0; return 0; } | ^ /<>/obj-aarch64-linux-gnu/meson-private/tmpgg6y7n5s/testfile.cpp:3:40: error: size '-1' of array 'a' is negative 3 | int main(void) { static int a[1-2*!(sizeof(void *) > 15)]; a[0]=0; return 0; } | ~^~~~~~~~~~~~~~~~~~~~~~~~~ ----------- Running compile: Working directory: /<>/obj-aarch64-linux-gnu/meson-private/tmpc8dyydpt Code: #include int main(void) { static int a[1-2*!(sizeof(void *) <= 11)]; a[0]=0; return 0; } ----------- Command line: `/usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial /<>/obj-aarch64-linux-gnu/meson-private/tmpc8dyydpt/testfile.cpp -o /<>/obj-aarch64-linux-gnu/meson-private/tmpc8dyydpt/output.obj -c -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -D_FILE_OFFSET_BITS=64 -O0 -fpermissive` -> 0 Running compile: Working directory: /<>/obj-aarch64-linux-gnu/meson-private/tmp60muscb0 Code: #include int main(void) { static int a[1-2*!(sizeof(void *) <= 9)]; a[0]=0; return 0; } ----------- Command line: `/usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial /<>/obj-aarch64-linux-gnu/meson-private/tmp60muscb0/testfile.cpp -o /<>/obj-aarch64-linux-gnu/meson-private/tmp60muscb0/output.obj -c -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -D_FILE_OFFSET_BITS=64 -O0 -fpermissive` -> 0 Running compile: Working directory: /<>/obj-aarch64-linux-gnu/meson-private/tmpsaqwrrf8 Code: #include int main(void) { static int a[1-2*!(sizeof(void *) <= 8)]; a[0]=0; return 0; } ----------- Command line: `/usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial /<>/obj-aarch64-linux-gnu/meson-private/tmpsaqwrrf8/testfile.cpp -o /<>/obj-aarch64-linux-gnu/meson-private/tmpsaqwrrf8/output.obj -c -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -D_FILE_OFFSET_BITS=64 -O0 -fpermissive` -> 0 Run-time dependency pbbam found: YES 2.4.0 Determining dependency 'zlib' with pkg-config executable '/usr/bin/aarch64-linux-gnu-pkg-config' env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/aarch64-linux-gnu-pkg-config ----------- Called: `/usr/bin/aarch64-linux-gnu-pkg-config --modversion zlib` -> 0 stdout: 1.3 ----------- env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/aarch64-linux-gnu-pkg-config ----------- Called: `/usr/bin/aarch64-linux-gnu-pkg-config --cflags zlib` -> 0 env[PKG_CONFIG_ALLOW_SYSTEM_LIBS]: 1 env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/aarch64-linux-gnu-pkg-config ----------- Called: `/usr/bin/aarch64-linux-gnu-pkg-config --libs zlib` -> 0 stdout: -L/usr/lib/aarch64-linux-gnu -lz ----------- env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/aarch64-linux-gnu-pkg-config ----------- Called: `/usr/bin/aarch64-linux-gnu-pkg-config --libs zlib` -> 0 stdout: -lz ----------- Run-time dependency zlib found: YES 1.3 Determining dependency 'htslib' with pkg-config executable '/usr/bin/aarch64-linux-gnu-pkg-config' env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/aarch64-linux-gnu-pkg-config ----------- Called: `/usr/bin/aarch64-linux-gnu-pkg-config --modversion htslib` -> 0 stdout: 1.19 ----------- env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/aarch64-linux-gnu-pkg-config ----------- Called: `/usr/bin/aarch64-linux-gnu-pkg-config --cflags htslib` -> 0 env[PKG_CONFIG_ALLOW_SYSTEM_LIBS]: 1 env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/aarch64-linux-gnu-pkg-config ----------- Called: `/usr/bin/aarch64-linux-gnu-pkg-config --libs htslib` -> 0 stdout: -L/usr/lib/aarch64-linux-gnu -lhts ----------- env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/aarch64-linux-gnu-pkg-config ----------- Called: `/usr/bin/aarch64-linux-gnu-pkg-config --libs htslib` -> 0 stdout: -lhts ----------- Run-time dependency htslib found: YES 1.19 Running compile: Working directory: /<>/obj-aarch64-linux-gnu/meson-private/tmp87hqza2b Code: int main(void) { return 0; } ----------- Command line: `/usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial /<>/obj-aarch64-linux-gnu/meson-private/tmp87hqza2b/testfile.cpp -o /<>/obj-aarch64-linux-gnu/meson-private/tmp87hqza2b/output.exe -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -D_FILE_OFFSET_BITS=64 -O0 -fpermissive -lrt -Wl,--allow-shlib-undefined -Wl,-z,relro -Wl,-z,now` -> 0 Library rt found: YES env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/aarch64-linux-gnu-pkg-config ----------- Called: `/usr/bin/aarch64-linux-gnu-pkg-config --list-all` -> 0 stdout: hdf5 HDF5 - Hierarchical Data Format 5 (HDF5) - serial version pbbam pbbam - Library for accessing PacBio-compatible BAM files pbcopper pbcopper - C++ library providing a suite of data structures, algorithms, and utilities htslib htslib - C library for high-throughput sequencing data formats liblzma liblzma - General purpose data compression library hdf5-serial HDF5 - Hierarchical Data Format 5 (HDF5) - serial version openssl OpenSSL - Secure Sockets Layer and cryptography libraries and tools libssl OpenSSL-libssl - Secure Sockets Layer and cryptography libraries libcrypto OpenSSL-libcrypto - OpenSSL cryptography library libjpeg libjpeg - A SIMD-accelerated JPEG codec that provides the libjpeg API zlib zlib - zlib compression library libdeflate libdeflate - Fast implementation of DEFLATE, zlib, and gzip libcurl libcurl - Library to transfer files with ftp, http, etc. libcrypt libxcrypt - Extended crypt library for DES, MD5, Blowfish and others libxcrypt libxcrypt - Extended crypt library for DES, MD5, Blowfish and others ----------- Determining dependency 'hdf5' with pkg-config executable '/usr/bin/aarch64-linux-gnu-pkg-config' env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/aarch64-linux-gnu-pkg-config ----------- Called: `/usr/bin/aarch64-linux-gnu-pkg-config --modversion hdf5` -> 0 stdout: 1.10.10 ----------- env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/aarch64-linux-gnu-pkg-config ----------- Called: `/usr/bin/aarch64-linux-gnu-pkg-config --cflags hdf5` -> 0 stdout: -I/usr/include/hdf5/serial ----------- env[PKG_CONFIG_ALLOW_SYSTEM_LIBS]: 1 env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/aarch64-linux-gnu-pkg-config ----------- Called: `/usr/bin/aarch64-linux-gnu-pkg-config --libs hdf5` -> 0 stdout: -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 ----------- env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/aarch64-linux-gnu-pkg-config ----------- Called: `/usr/bin/aarch64-linux-gnu-pkg-config --libs hdf5` -> 0 stdout: -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 ----------- Run-time dependency HDF5 for cpp found: YES 1.10.10 Configuring LibBlasrConfig.h using configuration Program tools/check-formatting found: YES (/<>/tools/check-formatting) Determining dependency 'gtest_main' with pkg-config executable '/usr/bin/aarch64-linux-gnu-pkg-config' env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/aarch64-linux-gnu-pkg-config ----------- Called: `/usr/bin/aarch64-linux-gnu-pkg-config --modversion gtest_main` -> 1 stderr: Package gtest_main was not found in the pkg-config search path. Perhaps you should add the directory containing `gtest_main.pc' to the PKG_CONFIG_PATH environment variable Package 'gtest_main', required by 'virtual:world', not found ----------- Running compile: Working directory: /<>/obj-aarch64-linux-gnu/meson-private/tmpy_k6_c05 Code: int main(void) { return 0; } ----------- Command line: `/usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial /<>/obj-aarch64-linux-gnu/meson-private/tmpy_k6_c05/testfile.cpp -o /<>/obj-aarch64-linux-gnu/meson-private/tmpy_k6_c05/output.exe -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -D_FILE_OFFSET_BITS=64 -O0 -fpermissive -lgtest -Wl,--allow-shlib-undefined -Wl,-z,relro -Wl,-z,now` -> 1 stderr: /usr/lib/gcc-cross/aarch64-linux-gnu/13/../../../../aarch64-linux-gnu/bin/ld: cannot find -lgtest: No such file or directory collect2: error: ld returned 1 exit status ----------- Running compile: Working directory: /<>/obj-aarch64-linux-gnu/meson-private/tmp1e7cnb2v Code: int main(void) { return 0; } ----------- Command line: `/usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial /<>/obj-aarch64-linux-gnu/meson-private/tmp1e7cnb2v/testfile.cpp -o /<>/obj-aarch64-linux-gnu/meson-private/tmp1e7cnb2v/output.exe -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_HDF5_1_10_1 -O3 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -D_FILE_OFFSET_BITS=64 -O0 -fpermissive -lgtest_main -Wl,--allow-shlib-undefined -Wl,-z,relro -Wl,-z,now` -> 1 stderr: /usr/lib/gcc-cross/aarch64-linux-gnu/13/../../../../aarch64-linux-gnu/bin/ld: cannot find -lgtest_main: No such file or directory collect2: error: ld returned 1 exit status ----------- Run-time dependency GTest found: NO (tried pkgconfig and system) Looking for a fallback subproject for the dependency gtest ../unittest/meson.build:15:21: ERROR: Automatic wrap-based subproject downloading is disabled dh_auto_configure: error: cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb LC_ALL=C.UTF-8 meson setup .. --wrap-mode=nodownload --buildtype=plain --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/aarch64-linux-gnu -Dpython.bytecompile=-1 --cross-file /<>/pbseqlib-5.3.5\+dfsg/debian/.debhelper/generated/_source/meson-cross-file.conf returned exit code 1 make: *** [debian/rules:24: binary-arch] Error 25 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2024-04-20T19:59:43Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 7056 Build-Time: 3 Distribution: unstable Fail-Stage: build Foreign Architectures: arm64 Host Architecture: arm64 Install-Time: 23 Job: pbseqlib_5.3.5+dfsg-6 Machine Architecture: amd64 Package: pbseqlib Package-Time: 37 Source-Version: 5.3.5+dfsg-6 Space: 7056 Status: attempted Version: 5.3.5+dfsg-6 -------------------------------------------------------------------------------- Finished at 2024-04-20T19:59:43Z Build needed 00:00:37, 7056k disk space