sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | plink2 2.00~a3-200116+dfsg-1 (armhf) Thu, 23 Jan 2020 01:40:03 +0000 | +==============================================================================+ Package: plink2 Version: 2.00~a3-200116+dfsg-1 Source Version: 2.00~a3-200116+dfsg-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-8e51d1f8-ecc6-46fa-b3dd-7a1dfa8249f9' with '<>' I: NOTICE: Log filtering will replace 'build/plink2-OQ4ask/resolver-wUozoQ' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [142 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-01-22-0813.55.pdiff [26.0 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-01-22-1416.53.pdiff [12.7 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-01-22-2021.59.pdiff [10.1 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-01-22-0813.55.pdiff [6802 B] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-01-22-1416.53.pdiff [36.2 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-01-22-2021.59.pdiff [12.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-01-22-2021.59.pdiff [10.1 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-01-22-2021.59.pdiff [12.3 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main armhf Packages [7960 kB] Fetched 8263 kB in 2s (4239 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: binutils binutils-common binutils-x86-64-linux-gnu libbinutils libctf-nobfd0 libctf0 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 4333 kB of archives. After this operation, 79.9 kB of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 libctf0 amd64 2.33.90.20200122-2 [45.8 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 binutils amd64 2.33.90.20200122-2 [58.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-x86-64-linux-gnu amd64 2.33.90.20200122-2 [1588 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libbinutils amd64 2.33.90.20200122-2 [470 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-common amd64 2.33.90.20200122-2 [2071 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libctf-nobfd0 amd64 2.33.90.20200122-2 [100 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 4333 kB in 0s (51.9 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12779 files and directories currently installed.) Preparing to unpack .../0-libctf0_2.33.90.20200122-2_amd64.deb ... Unpacking libctf0:amd64 (2.33.90.20200122-2) over (2.33.50.20200115-2) ... Preparing to unpack .../1-binutils_2.33.90.20200122-2_amd64.deb ... Unpacking binutils (2.33.90.20200122-2) over (2.33.50.20200115-2) ... Preparing to unpack .../2-binutils-x86-64-linux-gnu_2.33.90.20200122-2_amd64.deb ... Unpacking binutils-x86-64-linux-gnu (2.33.90.20200122-2) over (2.33.50.20200115-2) ... Preparing to unpack .../3-libbinutils_2.33.90.20200122-2_amd64.deb ... Unpacking libbinutils:amd64 (2.33.90.20200122-2) over (2.33.50.20200115-2) ... Preparing to unpack .../4-binutils-common_2.33.90.20200122-2_amd64.deb ... Unpacking binutils-common:amd64 (2.33.90.20200122-2) over (2.33.50.20200115-2) ... Preparing to unpack .../5-libctf-nobfd0_2.33.90.20200122-2_amd64.deb ... Unpacking libctf-nobfd0:amd64 (2.33.90.20200122-2) over (2.33.50.20200115-2) ... Setting up binutils-common:amd64 (2.33.90.20200122-2) ... Setting up libctf-nobfd0:amd64 (2.33.90.20200122-2) ... Setting up libbinutils:amd64 (2.33.90.20200122-2) ... Setting up libctf0:amd64 (2.33.90.20200122-2) ... Setting up binutils-x86-64-linux-gnu (2.33.90.20200122-2) ... Setting up binutils (2.33.90.20200122-2) ... Processing triggers for libc-bin (2.29-9) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'plink2' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/plink2.git Please use: git clone https://salsa.debian.org/med-team/plink2.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 866 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main plink2 2.00~a3-200116+dfsg-1 (dsc) [2180 B] Get:2 http://debian.oregonstate.edu/debian unstable/main plink2 2.00~a3-200116+dfsg-1 (tar) [845 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main plink2 2.00~a3-200116+dfsg-1 (diff) [18.8 kB] Fetched 866 kB in 1s (989 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/plink2-OQ4ask/plink2-2.00~a3-200116+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/plink2-OQ4ask' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), help2man, libatlas-base-dev, liblapack-dev, libzstd-dev, zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf Filtered Build-Depends: debhelper-compat (= 12), help2man, libatlas-base-dev, liblapack-dev, libzstd-dev, zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [433 B] Get:5 copy:/<>/apt_archive ./ Packages [522 B] Fetched 1912 B in 0s (90.3 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdmainutils build-essential cpp-9-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-9-arm-linux-gnueabihf gcc-9-arm-linux-gnueabihf-base gcc-9-base:armhf gcc-9-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan5:armhf libasan5-armhf-cross libatlas-base-dev:armhf libatlas3-base:armhf libatomic1:armhf libatomic1-armhf-cross libbsd0 libc6:armhf libc6-armhf-cross libc6-dev libc6-dev:armhf libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:armhf libcrypt1:armhf libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:armhf libgcc-9-dev-armhf-cross libgcc1:armhf libgcc1-armhf-cross libgfortran5:armhf libglib2.0-0 libgomp1:armhf libgomp1-armhf-cross libicu63 libio-string-perl liblapack-dev:armhf liblapack3:armhf liblocale-gettext-perl libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libstdc++-9-dev libstdc++-9-dev:armhf libstdc++-9-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd-dev:armhf libzstd1:armhf linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db po-debconf sensible-utils ucf zlib1g:armhf zlib1g-dev:armhf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican | wordlist whois vacation gcc-9-locales cpp-doc dh-make binutils-multiarch g++-multilib g++-9-multilib gcc-9-doc manpages-dev flex bison gdb-arm-linux-gnueabihf gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff libatlas-doc:armhf liblapack-doc:armhf glibc-doc:armhf libc-l10n:armhf locales:armhf glibc-doc manpages-dev:armhf libstdc++-9-doc libstdc++-9-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:armhf libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdmainutils build-essential cpp-9-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-9-arm-linux-gnueabihf gcc-9-arm-linux-gnueabihf-base gcc-9-base:armhf gcc-9-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan5:armhf libasan5-armhf-cross libatlas-base-dev:armhf libatlas3-base:armhf libatomic1:armhf libatomic1-armhf-cross libbsd0 libc6:armhf libc6-armhf-cross libc6-dev libc6-dev:armhf libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:armhf libcrypt1:armhf libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:armhf libgcc-9-dev-armhf-cross libgcc1:armhf libgcc1-armhf-cross libgfortran5:armhf libglib2.0-0 libgomp1:armhf libgomp1-armhf-cross libicu63 libio-string-perl liblapack-dev:armhf liblapack3:armhf liblocale-gettext-perl libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libstdc++-9-dev libstdc++-9-dev:armhf libstdc++-9-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd-dev:armhf libzstd1:armhf linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:armhf sensible-utils ucf zlib1g:armhf zlib1g-dev:armhf 0 upgraded, 102 newly installed, 0 to remove and 0 not upgraded. Need to get 87.2 MB of archives. After this operation, 355 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [948 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-4 [919 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.2-2 [33.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.0-2 [1307 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main armhf gcc-9-base armhf 9.2.1-24 [195 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-4 [262 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-4 [120 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-4 [67.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabihf amd64 2.33.90.20200122-2 [2748 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.10-10 [104 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.29-9 [2636 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev amd64 9.2.1-24 [1677 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9 amd64 9.2.1-24 [10.7 MB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:9.2.1-3.1 [1644 B] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-arm-linux-gnueabihf-base amd64 9.2.1-21cross1 [194 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-arm-linux-gnueabihf amd64 9.2.1-21cross1 [6813 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabihf amd64 4:9.2.1-3.1 [16.7 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base all 9.2.1-21cross1 [190 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armhf-cross all 2.29-9cross1 [1110 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-armhf-cross all 1:9.2.1-21cross1 [37.3 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armhf-cross all 9.2.1-21cross1 [73.2 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armhf-cross all 9.2.1-21cross1 [6624 B] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-armhf-cross all 9.2.1-21cross1 [362 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armhf-cross all 9.2.1-21cross1 [392 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armhf-cross all 9.2.1-21cross1 [112 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-armhf-cross all 9.2.1-21cross1 [664 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-arm-linux-gnueabihf amd64 9.2.1-21cross1 [7159 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabihf amd64 4:9.2.1-3.1 [1476 B] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armhf-cross all 5.4.8-1cross1 [1128 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armhf-cross all 2.29-9cross1 [2110 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-armhf-cross all 9.2.1-21cross1 [1720 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-arm-linux-gnueabihf amd64 9.2.1-21cross1 [7390 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabihf amd64 4:9.2.1-3.1 [1184 B] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000002-1 [52.0 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-2 [8301 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-8 [710 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1+b1 [344 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.29-1 [67.4 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armhf all 12.8 [6644 B] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-11 [547 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 12.8 [176 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.67-1 [104 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.6.3-2 [23.7 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.6.3-2 [14.7 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.62.4-1+b1 [1319 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.8 [1019 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 help2man amd64 1.47.12 [180 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main armhf libgcc1 armhf 1:9.2.1-24 [37.3 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main armhf libcrypt1 armhf 1:4.4.10-10 [101 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main armhf libc6 armhf 2.29-9 [2328 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main armhf libasan5 armhf 9.2.1-24 [370 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main armhf libgfortran5 armhf 9.2.1-24 [238 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main armhf libatlas3-base armhf 3.10.3-9 [2466 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main armhf libatlas-base-dev armhf 3.10.3-9 [3072 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main armhf libatomic1 armhf 9.2.1-24 [6880 B] Get:89 http://debian.oregonstate.edu/debian unstable/main armhf linux-libc-dev armhf 5.4.13-1 [1040 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main armhf libcrypt-dev armhf 1:4.4.10-10 [120 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main armhf libc6-dev armhf 2.29-9 [2129 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main armhf libgomp1 armhf 9.2.1-24 [75.2 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++6 armhf 9.2.1-24 [432 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main armhf libubsan1 armhf 9.2.1-24 [113 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-9-dev armhf 9.2.1-24 [664 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main armhf liblapack3 armhf 3.9.0-1 [1747 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main armhf liblapack-dev armhf 3.9.0-1 [1827 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++-9-dev armhf 9.2.1-24 [1721 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main armhf libzstd1 armhf 1.4.4+dfsg-1 [220 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main armhf libzstd-dev armhf 1.4.4+dfsg-1 [272 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main armhf zlib1g armhf 1:1.2.11.dfsg-1+b1 [85.1 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1+b1 [204 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 87.2 MB in 1s (75.2 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 12779 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../001-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../002-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../003-groff-base_1.22.4-4_amd64.deb ... Unpacking groff-base (1.22.4-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../004-libpipeline1_1.5.2-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.2-2) ... Selecting previously unselected package man-db. Preparing to unpack .../005-man-db_2.9.0-2_amd64.deb ... Unpacking man-db (2.9.0-2) ... 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Unpacking libstdc++-9-dev:armhf (9.2.1-24) ... Selecting previously unselected package libzstd1:armhf. Preparing to unpack .../097-libzstd1_1.4.4+dfsg-1_armhf.deb ... Unpacking libzstd1:armhf (1.4.4+dfsg-1) ... Selecting previously unselected package libzstd-dev:armhf. Preparing to unpack .../098-libzstd-dev_1.4.4+dfsg-1_armhf.deb ... Unpacking libzstd-dev:armhf (1.4.4+dfsg-1) ... Selecting previously unselected package zlib1g:armhf. Preparing to unpack .../099-zlib1g_1%3a1.2.11.dfsg-1+b1_armhf.deb ... Unpacking zlib1g:armhf (1:1.2.11.dfsg-1+b1) ... Selecting previously unselected package zlib1g-dev:armhf. Preparing to unpack .../100-zlib1g-dev_1%3a1.2.11.dfsg-1+b1_armhf.deb ... Unpacking zlib1g-dev:armhf (1:1.2.11.dfsg-1+b1) ... Selecting previously unselected package sbuild-build-depends-main-dummy:armhf. Preparing to unpack .../101-sbuild-build-depends-main-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000002-1) ... Setting up libpipeline1:amd64 (1.5.2-2) ... Setting up libfile-which-perl (1.23-1) ... Setting up libc6-armhf-cross (2.29-9cross1) ... Setting up libmagic-mgc (1:5.38-4) ... Setting up libarchive-zip-perl (1.67-1) ... Setting up libglib2.0-0:amd64 (2.62.4-1+b1) ... No schema files found: doing nothing. Setting up libdebhelper-perl (12.8) ... Setting up libmagic1:amd64 (1:5.38-4) ... Setting up linux-libc-dev:armhf (5.4.13-1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.38-4) ... Setting up libyaml-perl (1.29-1) ... Setting up libicu63:amd64 (63.2-2) ... Setting up gcc-9-arm-linux-gnueabihf-base:amd64 (9.2.1-21cross1) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up linux-libc-dev-armhf-cross (5.4.8-1cross1) ... Setting up autopoint (0.19.8.1-10) ... Setting up gcc-9-cross-base (9.2.1-21cross1) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.10-10) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up libc6-dev:amd64 (2.29-9) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up binutils-arm-linux-gnueabihf (2.33.90.20200122-2) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-8) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up gcc-9-base:armhf (9.2.1-24) ... Setting up libgomp1-armhf-cross (9.2.1-21cross1) ... Setting up libfile-stripnondeterminism-perl (1.6.3-2) ... Setting up libstdc++-9-dev:amd64 (9.2.1-24) ... Setting up libtool (2.4.6-11) ... Setting up cpp-9-arm-linux-gnueabihf (9.2.1-21cross1) ... Setting up libc6-dev-armhf-cross (2.29-9cross1) ... Setting up m4 (1.4.18-4) ... Setting up libatomic1-armhf-cross (9.2.1-21cross1) ... Setting up help2man (1.47.12) ... Setting up libgcc1-armhf-cross (1:9.2.1-21cross1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0038+nmu1) ... Setting up g++-9 (9.2.1-24) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.6.3-2) ... Setting up g++ (4:9.2.1-3.1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4) ... Setting up build-essential (12.8) ... Setting up cpp-arm-linux-gnueabihf (4:9.2.1-3.1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10) ... Setting up man-db (2.9.0-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libasan5-armhf-cross (9.2.1-21cross1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libstdc++6-armhf-cross (9.2.1-21cross1) ... Setting up libubsan1-armhf-cross (9.2.1-21cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-9-dev-armhf-cross (9.2.1-21cross1) ... Setting up po-debconf (1.0.21) ... Setting up libxml-simple-perl (2.25-1) ... Setting up gcc-9-arm-linux-gnueabihf (9.2.1-21cross1) ... Setting up libstdc++-9-dev-armhf-cross (9.2.1-21cross1) ... Setting up gcc-arm-linux-gnueabihf (4:9.2.1-3.1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up g++-9-arm-linux-gnueabihf (9.2.1-21cross1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up g++-arm-linux-gnueabihf (4:9.2.1-3.1) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-armhf (12.8) ... Setting up libcrypt1:armhf (1:4.4.10-10) ... Setting up dh-autoreconf (19) ... Setting up libc6:armhf (2.29-9) ... Setting up libcrypt-dev:armhf (1:4.4.10-10) ... Setting up libc6-dev:armhf (2.29-9) ... Setting up libzstd1:armhf (1.4.4+dfsg-1) ... Setting up libzstd-dev:armhf (1.4.4+dfsg-1) ... Setting up libgcc1:armhf (1:9.2.1-24) ... Setting up debhelper (12.8) ... Setting up zlib1g:armhf (1:1.2.11.dfsg-1+b1) ... Setting up libgomp1:armhf (9.2.1-24) ... Setting up libasan5:armhf (9.2.1-24) ... Setting up libatomic1:armhf (9.2.1-24) ... Setting up libgfortran5:armhf (9.2.1-24) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1+b1) ... Setting up libstdc++6:armhf (9.2.1-24) ... Setting up libatlas3-base:armhf (3.10.3-9) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/atlas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode update-alternatives: using /usr/lib/arm-linux-gnueabihf/atlas/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up libatlas-base-dev:armhf (3.10.3-9) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/atlas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode update-alternatives: using /usr/lib/arm-linux-gnueabihf/atlas/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode Setting up libubsan1:armhf (9.2.1-24) ... Setting up liblapack3:armhf (3.9.0-1) ... Setting up libgcc-9-dev:armhf (9.2.1-24) ... Setting up liblapack-dev:armhf (3.9.0-1) ... Setting up libstdc++-9-dev:armhf (9.2.1-24) ... Setting up sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.29-9) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any-amd64 any-i386 armel armhf mipsel) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 #1 SMP Debian 4.9.144-3.1 (2019-02-19) amd64 (x86_64) Toolchain package versions: binutils_2.33.90.20200122-2 dpkg-dev_1.19.7 g++-9_9.2.1-24 gcc-8_8.3.0-26 gcc-9_9.2.1-24 libc6-dev_2.29-9 libstdc++-9-dev_9.2.1-24 libstdc++-9-dev-armhf-cross_9.2.1-21cross1 libstdc++6_9.2.1-24 libstdc++6-armhf-cross_9.2.1-21cross1 linux-libc-dev_5.4.13-1 Package versions: adduser_3.118 apt_1.8.4 autoconf_2.69-11.1 automake_1:1.16.1-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-5 binutils_2.33.90.20200122-2 binutils-arm-linux-gnueabihf_2.33.90.20200122-2 binutils-common_2.33.90.20200122-2 binutils-x86-64-linux-gnu_2.33.90.20200122-2 bsdmainutils_11.1.2+b1 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 coreutils_8.30-3+b1 cpp_4:9.2.1-3.1 cpp-8_8.3.0-26 cpp-9_9.2.1-24 cpp-9-arm-linux-gnueabihf_9.2.1-21cross1 cpp-arm-linux-gnueabihf_4:9.2.1-3.1 cross-config_2.6.15-3 crossbuild-essential-armhf_12.8 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.8 debian-archive-keyring_2019.1 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.6.3-2 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.5-2 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.38-4 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-9_9.2.1-24 g++-9-arm-linux-gnueabihf_9.2.1-21cross1 g++-arm-linux-gnueabihf_4:9.2.1-3.1 gcc_4:9.2.1-3.1 gcc-8_8.3.0-26 gcc-8-base_8.3.0-26 gcc-9_9.2.1-24 gcc-9-arm-linux-gnueabihf_9.2.1-21cross1 gcc-9-arm-linux-gnueabihf-base_9.2.1-21cross1 gcc-9-base_9.2.1-24 gcc-9-cross-base_9.2.1-21cross1 gcc-arm-linux-gnueabihf_4:9.2.1-3.1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.19-1 grep_3.3-1 groff-base_1.22.4-4 gzip_1.9-3+b1 help2man_1.47.12 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-5 libapt-pkg5.0_1.8.4 libarchive-zip-perl_1.67-1 libasan5_9.2.1-24 libasan5-armhf-cross_9.2.1-21cross1 libatlas-base-dev_3.10.3-9 libatlas3-base_3.10.3-9 libatomic1_9.2.1-24 libatomic1-armhf-cross_9.2.1-21cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2+b1 libbinutils_2.33.90.20200122-2 libblkid1_2.34-0.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.29-9 libc-dev-bin_2.29-9 libc6_2.29-9 libc6-armhf-cross_2.29-9cross1 libc6-dev_2.29-9 libc6-dev-armhf-cross_2.29-9cross1 libcap-ng0_0.7.9-2.1+b1 libcc1-0_9.2.1-24 libcom-err2_1.45.5-2 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000002-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.10-10 libcrypt1_1:4.4.10-10 libctf-nobfd0_2.33.90.20200122-2 libctf0_2.33.90.20200122-2 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.250 libdebhelper-perl_12.8 libdebian-dpkgcross-perl_2.6.15-3 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libext2fs2_1.45.5-2 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi6_3.2.1-9 libffi7_3.3-3 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.6.3-2 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-26 libgcc-9-dev_9.2.1-24 libgcc-9-dev-armhf-cross_9.2.1-21cross1 libgcc1_1:9.2.1-24 libgcc1-armhf-cross_1:9.2.1-21cross1 libgcrypt20_1.8.5-3 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran5_9.2.1-24 libglib2.0-0_2.62.4-1+b1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.11.1-2 libgomp1_9.2.1-24 libgomp1-armhf-cross_9.2.1-21cross1 libgpg-error0_1.36-7 libhogweed4_3.5.1+really3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libicu63_63.2-2 libidn2-0_2.2.0-2 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22-2 libitm1_9.2.1-24 liblapack-dev_3.9.0-1 liblapack3_3.9.0-1 liblocale-gettext-perl_1.07-4 liblsan0_9.2.1-24 liblz4-1_1.9.2-2 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-26 libncursesw6_6.1+20191019-1 libnettle6_3.5.1+really3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libp11-kit0_0.23.18.1-2+b1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12+b1 libperl5.28_5.28.1-6 libperl5.30_5.30.0-9 libpipeline1_1.5.2-2 libquadmath0_9.2.1-24 libseccomp2_2.4.2-2 libselinux1_3.0-1 libsemanage-common_3.0-1 libsemanage1_3.0-1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libss2_1.45.5-2 libstdc++-9-dev_9.2.1-24 libstdc++-9-dev-armhf-cross_9.2.1-21cross1 libstdc++6_9.2.1-24 libstdc++6-armhf-cross_9.2.1-21cross1 libsub-override-perl_0.09-2 libsystemd0_244-3 libtasn1-6_4.15.0-2 libtinfo6_6.1+20191019-1 libtool_2.4.6-11 libtsan0_9.2.1-24 libubsan1_9.2.1-24 libubsan1-armhf-cross_9.2.1-21cross1 libuchardet0_0.0.6-3 libudev1_244-3 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libxml-libxml-perl_2.0134+dfsg-1+b1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-8 libyaml-perl_1.29-1 libzstd-dev_1.4.4+dfsg-1 libzstd1_1.4.4+dfsg-1 linux-libc-dev_5.4.13-1 linux-libc-dev-armhf-cross_5.4.8-1cross1 login_1:4.8-1 logsave_1.45.5-2 lsb-base_11.1.0 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-2 mawk_1.3.3-20 mount_2.34-0.1 ncurses-base_6.1+20191019-1 ncurses-bin_6.1+20191019-1 passwd_1:4.8-1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.0-9 po-debconf_1.0.21 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-2.1 tar_1.30+dfsg-6+b1 tzdata_2019c-3 ucf_3.0038+nmu1 util-linux_2.34-0.1 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-1+b1 zlib1g-dev_1:1.2.11.dfsg-1+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: plink2 Binary: plink2 Architecture: any-amd64 any-i386 armel armhf mipsel Version: 2.00~a3-200116+dfsg-1 Maintainer: Debian Med Packaging Team Uploaders: Dylan Aïssi Homepage: https://www.cog-genomics.org/plink/2.0/ Standards-Version: 4.4.1 Vcs-Browser: https://salsa.debian.org/med-team/plink2 Vcs-Git: https://salsa.debian.org/med-team/plink2.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 12), help2man, libatlas-base-dev, liblapack-dev, libzstd-dev, zlib1g-dev Package-List: plink2 deb science optional arch=any-amd64,any-i386,armel,armhf,mipsel Checksums-Sha1: 9b16fe573949cd62127febd8f1f358e087b71ef0 845044 plink2_2.00~a3-200116+dfsg.orig.tar.xz 383d19690d2576390d4855c0ab5ba33933a482e9 18776 plink2_2.00~a3-200116+dfsg-1.debian.tar.xz Checksums-Sha256: ef88933a649089e3fba0621b28e8d93d14bd371ca11f4fa58a02189d5db8cd8a 845044 plink2_2.00~a3-200116+dfsg.orig.tar.xz c85f408307af2eb524f8ad9da018d4add326cea0c5c7a5d17488f79c5f42b3f2 18776 plink2_2.00~a3-200116+dfsg-1.debian.tar.xz Files: 2986e16a76c4b3202db4b5a09b094998 845044 plink2_2.00~a3-200116+dfsg.orig.tar.xz 83bbc69dbfb240237a21bcb541ae0da1 18776 plink2_2.00~a3-200116+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEmjwHvQbeL0FugTpdYS7xYT4FD1QFAl4n6doSHGRhaXNzaUBk ZWJpYW4ub3JnAAoJEGEu8WE+BQ9UQ+cP/1li5NQzwMFwRTd7szp3TiEQ5/6R906k jVIwVwFQwSWhtv0cAaySmu+4LWTpesoLDh+vexrKwdYEHvKrasuA10IIIlIoBAVV WKP1Kdai+FzbGgPlcr6wehvzCWxQaXn8o8QCWuvHC7BbjGsm8OaZ7D86sKG1DVD5 5WaAFJKkErkM4Oz88RrgcYccjGG0aamX/r7gy1M8Hi1WpFWG8mnziFDufuT1Dk4K VQxyC6LH5R71zpvAVSnGjpfFa3rm67W3BowJqr9CvCdqMEGwzZEdRKedUxXTEMUI fX2BJDb9ZMeDA2uezG1JOVbdyk4NchCLh41bxScmwNCyOQCy7mqP7qPEnM2Db79j JjG+XmNmr8B2lopmCF8uqmiSuYXWDowJGxtWa7CUnf84YtnzduZW0spu+g0MilXj x5VX/rXnOR/YBlAFSyyZAk5xxyRflxy5nAPombR4kiLm7ciiLg71GOoPdtTd1NiM A1wrbEbHSBLvlyIaSbudwga7QGaIPEbAa3WSFj9rRjhRlrlRVpSZYJe7OHV8King /pECRI45lDkfTuWXcY+Bn7dgBitLCgFDJK5sTEqPDmhLGEs6WEv3ON8cOZYICBQi e2Nx/Cwj/Bos3ujNVI8fwTnJIYrdP78/PkYw3GZY3vFOWSOu+xH5TEpEQ1x4+D+q A69iLFj8qIWl =o77L -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Wed Jan 22 06:21:14 2020 UTC gpgv: using RSA key 9A3C07BD06DE2F416E813A5D612EF1613E050F54 gpgv: issuer "daissi@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./plink2_2.00~a3-200116+dfsg-1.dsc dpkg-source: info: extracting plink2 in /<> dpkg-source: info: unpacking plink2_2.00~a3-200116+dfsg.orig.tar.xz dpkg-source: info: unpacking plink2_2.00~a3-200116+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying Fix_Makefile.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-8e51d1f8-ecc6-46fa-b3dd-7a1dfa8249f9 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarmhf -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package plink2 dpkg-buildpackage: info: source version 2.00~a3-200116+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Dylan Aïssi dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --sourcedirectory=build_dynamic/ debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean cd build_dynamic && make -j1 clean make[2]: Entering directory '/<>/build_dynamic' rm -f *.o rm -f plink2 rm -f pgen_compress make[2]: Leaving directory '/<>/build_dynamic' rm -f plink2.1 rm -f pgen_compress.1 make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--sourcedirectory=build_dynamic/ dh_clean -O--sourcedirectory=build_dynamic/ debian/rules build-arch dh build-arch --sourcedirectory=build_dynamic/ dh_update_autotools_config -a -O--sourcedirectory=build_dynamic/ dh_autoreconf -a -O--sourcedirectory=build_dynamic/ dh_auto_configure -a -O--sourcedirectory=build_dynamic/ debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build cd build_dynamic && make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabihf-pkg-config CXX=arm-linux-gnueabihf-g\+\+ CC=arm-linux-gnueabihf-gcc make[2]: Entering directory '/<>/build_dynamic' gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -std=gnu99 -DZSTD_MULTITHREAD -Wall -Wextra -Wshadow -Wformat-security -I../libdeflate -I../libdeflate/common ../include/SFMT.c ../libdeflate/lib/adler32.c ../libdeflate/lib/aligned_malloc.c ../libdeflate/lib/crc32.c ../libdeflate/lib/deflate_compress.c ../libdeflate/lib/deflate_decompress.c ../libdeflate/lib/gzip_compress.c ../libdeflate/lib/gzip_decompress.c ../libdeflate/lib/zlib_compress.c ../libdeflate/lib/zlib_decompress.c ../libdeflate/lib/x86/cpu_features.c -c echo gcc -O2 -std=gnu99 -DZSTD_MULTITHREAD -Wall -Wextra -Wshadow -Wformat-security -I../zstd/lib -I../zstd/lib/common -c gcc -O2 -std=gnu99 -DZSTD_MULTITHREAD -Wall -Wextra -Wshadow -Wformat-security -I../zstd/lib -I../zstd/lib/common -c g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++11 -O2 -DZSTD_MULTITHREAD -Wall -Wextra -Wshadow -Wformat-security -Wold-style-cast ../include/plink2_base.cc ../include/plink2_bits.cc ../include/pgenlib_misc.cc ../include/pgenlib_read.cc ../include/pgenlib_write.cc ../include/plink2_bgzf.cc ../include/plink2_stats.cc ../include/plink2_string.cc ../include/plink2_text.cc ../include/plink2_thread.cc ../include/plink2_zstfile.cc ../plink2.cc ../plink2_adjust.cc ../plink2_cmdline.cc ../plink2_common.cc ../plink2_compress_stream.cc ../plink2_data.cc ../plink2_decompress.cc ../plink2_export.cc ../plink2_fasta.cc ../plink2_filter.cc ../plink2_glm.cc ../plink2_help.cc ../plink2_import.cc ../plink2_ld.cc ../plink2_matrix.cc ../plink2_matrix_calc.cc ../plink2_misc.cc ../plink2_psam.cc ../plink2_pvar.cc ../plink2_random.cc ../plink2_set.cc -c In file included from ../plink2_glm.cc:20: ../plink2_matrix.h:116:22: fatal error: cblas.h: No such file or directory 116 | # include | ^~~~~~~~~ compilation terminated. In file included from ../plink2_matrix.cc:18: ../plink2_matrix.h:116:22: fatal error: cblas.h: No such file or directory 116 | # include | ^~~~~~~~~ compilation terminated. In file included from ../plink2_matrix_calc.cc:19: ../plink2_matrix.h:116:22: fatal error: cblas.h: No such file or directory 116 | # include | ^~~~~~~~~ compilation terminated. make[2]: *** [Makefile:149: plink2] Error 1 make[2]: Leaving directory '/<>/build_dynamic' dh_auto_build: error: cd build_dynamic && make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabihf-pkg-config CXX=arm-linux-gnueabihf-g\+\+ CC=arm-linux-gnueabihf-gcc returned exit code 2 make[1]: *** [debian/rules:16: override_dh_auto_build] Error 25 make[1]: Leaving directory '/<>' make: *** [debian/rules:8: build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2020-01-23T01:42:01Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 41468 Build-Time: 82 Distribution: unstable Fail-Stage: build Foreign Architectures: armhf Host Architecture: armhf Install-Time: 21 Job: plink2_2.00~a3-200116+dfsg-1 Machine Architecture: amd64 Package: plink2 Package-Time: 118 Source-Version: 2.00~a3-200116+dfsg-1 Space: 41468 Status: attempted Version: 2.00~a3-200116+dfsg-1 -------------------------------------------------------------------------------- Finished at 2020-01-23T01:42:01Z Build needed 00:01:58, 41468k disk space