sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | plink2 2.00~a6.9-250129+dfsg-1 (mips64el) Mon, 17 Feb 2025 07:09:35 +0000 | +==============================================================================+ Package: plink2 Version: 2.00~a6.9-250129+dfsg-1 Source Version: 2.00~a6.9-250129+dfsg-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: mips64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-598d88ea-d5b8-403a-a1e9-c3aa07f702ef' with '<>' I: NOTICE: Log filtering will replace 'build/plink2-BeQ8rT/resolver-ZhMmS3' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian unstable InRelease [205 kB] Get:2 http://localhost:3142/debian unstable/non-free Sources.diff/Index [63.3 kB] Get:3 http://localhost:3142/debian unstable/non-free-firmware Sources.diff/Index [63.3 kB] Get:4 http://localhost:3142/debian unstable/main Sources.diff/Index [63.6 kB] Get:5 http://localhost:3142/debian unstable/contrib Sources.diff/Index [63.3 kB] Get:6 http://localhost:3142/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:7 http://localhost:3142/debian unstable/non-free Sources T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [418 B] Get:8 http://localhost:3142/debian unstable/non-free-firmware Sources T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [658 B] Get:9 http://localhost:3142/debian unstable/main Sources T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [23.1 kB] Get:10 http://localhost:3142/debian unstable/contrib Sources T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [309 B] Get:7 http://localhost:3142/debian unstable/non-free Sources T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [418 B] Get:11 http://localhost:3142/debian unstable/main amd64 Packages T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [26.4 kB] Get:10 http://localhost:3142/debian unstable/contrib Sources T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [309 B] Get:9 http://localhost:3142/debian unstable/main Sources T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [23.1 kB] Get:8 http://localhost:3142/debian unstable/non-free-firmware Sources T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [658 B] Get:11 http://localhost:3142/debian unstable/main amd64 Packages T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [26.4 kB] Get:12 http://localhost:3142/debian unstable/main mips64el Packages [9729 kB] Fetched 10.3 MB in 2s (5166 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libapt-pkg6.0t64 Use 'apt autoremove' to remove it. The following NEW packages will be installed: libapt-pkg7.0 The following packages will be upgraded: apt libperl5.40 login.defs passwd perl perl-base perl-modules-5.40 7 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 13.2 MB of archives. After this operation, 3834 kB of additional disk space will be used. Get:1 http://localhost:3142/debian unstable/main amd64 perl-modules-5.40 all 5.40.1-2 [3017 kB] Get:2 http://localhost:3142/debian unstable/main amd64 libperl5.40 amd64 5.40.1-2 [4315 kB] Get:3 http://localhost:3142/debian unstable/main amd64 perl amd64 5.40.1-2 [267 kB] Get:4 http://localhost:3142/debian unstable/main amd64 perl-base amd64 5.40.1-2 [1665 kB] Get:5 http://localhost:3142/debian unstable/main amd64 libapt-pkg7.0 amd64 2.9.30 [1104 kB] Get:6 http://localhost:3142/debian unstable/main amd64 apt amd64 2.9.30 [1440 kB] Get:7 http://localhost:3142/debian unstable/main amd64 login.defs all 1:4.17.2-3 [185 kB] Get:8 http://localhost:3142/debian unstable/main amd64 passwd amd64 1:4.17.2-3 [1237 kB] Fetched 13.2 MB in 0s (188 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12871 files and directories currently installed.) Preparing to unpack .../perl_5.40.1-2_amd64.deb ... Unpacking perl (5.40.1-2) over (5.40.0-8) ... Preparing to unpack .../perl-modules-5.40_5.40.1-2_all.deb ... Unpacking perl-modules-5.40 (5.40.1-2) over (5.40.0-8) ... Preparing to unpack .../libperl5.40_5.40.1-2_amd64.deb ... Unpacking libperl5.40:amd64 (5.40.1-2) over (5.40.0-8) ... Preparing to unpack .../perl-base_5.40.1-2_amd64.deb ... Unpacking perl-base (5.40.1-2) over (5.40.0-8) ... Setting up perl-base (5.40.1-2) ... Selecting previously unselected package libapt-pkg7.0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12871 files and directories currently installed.) Preparing to unpack .../libapt-pkg7.0_2.9.30_amd64.deb ... Unpacking libapt-pkg7.0:amd64 (2.9.30) ... Setting up libapt-pkg7.0:amd64 (2.9.30) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12920 files and directories currently installed.) Preparing to unpack .../archives/apt_2.9.30_amd64.deb ... Unpacking apt (2.9.30) over (2.9.29) ... Setting up apt (2.9.30) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12920 files and directories currently installed.) Preparing to unpack .../login.defs_1%3a4.17.2-3_all.deb ... Unpacking login.defs (1:4.17.2-3) over (1:4.17.2-2) ... Preparing to unpack .../passwd_1%3a4.17.2-3_amd64.deb ... Unpacking passwd (1:4.17.2-3) over (1:4.17.2-2) ... Setting up login.defs (1:4.17.2-3) ... Setting up passwd (1:4.17.2-3) ... Setting up perl-modules-5.40 (5.40.1-2) ... Setting up libperl5.40:amd64 (5.40.1-2) ... Setting up perl (5.40.1-2) ... Processing triggers for libc-bin (2.40-7) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'plink2' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/plink2.git Please use: git clone https://salsa.debian.org/med-team/plink2.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1630 kB of source archives. Get:1 http://localhost:3142/debian unstable/main plink2 2.00~a6.9-250129+dfsg-1 (dsc) [2130 B] Get:2 http://localhost:3142/debian unstable/main plink2 2.00~a6.9-250129+dfsg-1 (tar) [1569 kB] Get:3 http://localhost:3142/debian unstable/main plink2 2.00~a6.9-250129+dfsg-1 (diff) [58.5 kB] Fetched 1630 kB in 0s (9905 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/plink2-BeQ8rT/plink2-2.00~a6.9-250129+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/plink2-BeQ8rT' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), help2man, liblapack-dev | liblapack.so, libzstd-dev, zlib1g-dev, libsimde-dev, libdeflate-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el Filtered Build-Depends: debhelper-compat (= 13), help2man, liblapack-dev, libzstd-dev, zlib1g-dev, libsimde-dev, libdeflate-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el dpkg-deb: warning: root directory /<>/sbuild-build-depends-main-dummy has unusual owner or group 1000:119 dpkg-deb: hint: you might need to pass --root-owner-group, see for further details dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [818 B] Get:5 copy:/<>/apt_archive ./ Packages [849 B] Fetched 2276 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... /usr/lib/apt/solvers/apt: /lib/x86_64-linux-gnu/libapt-private.so.0.0: no version information available (required by /usr/lib/apt/solvers/apt) Execute external solver... The following package was automatically installed and is no longer required: libapt-pkg6.0t64 Use 'apt autoremove' to remove it. The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdextrautils cpp-14-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-14-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-14-base:mips64el gcc-14-cross-base-mipsen gcc-14-mips64el-linux-gnuabi64 gcc-14-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libblas-dev:mips64el libblas3:mips64el libc6:mips64el libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:mips64el libcrypt1:mips64el libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:mips64el libdeflate0:mips64el libelf1t64 libfakeroot libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-14-dev:mips64el libgcc-14-dev-mips64el-cross libgcc-s1:mips64el libgcc-s1-mips64el-cross libgfortran5:mips64el libgomp1:mips64el libgomp1-mips64el-cross libicu72 libio-string-perl liblapack-dev:mips64el liblapack3:mips64el liblocale-gettext-perl libmagic-mgc libmagic1t64 libncursesw6 libpipeline1 libproc2-0 libsimde-dev libstdc++-14-dev:mips64el libstdc++-14-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libtext-charwidth-perl libtext-wrapi18n-perl libtool libuchardet0 libunistring5 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd-dev:mips64el libzstd1:mips64el linux-libc-dev-mips64el-cross m4 man-db po-debconf procps sensible-utils ucf zlib1g:mips64el zlib1g-dev:mips64el Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-14-locales cpp-14-doc cpp-doc dh-make binutils-multiarch gcc-14-doc manpages-dev flex bison gdb-mips64el-linux-gnuabi64 gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff liblapack-doc:mips64el glibc-doc:mips64el libc-l10n:mips64el locales:mips64el libnss-nis:mips64el libnss-nisplus:mips64el manpages-dev:mips64el libstdc++-14-doc:mips64el libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:mips64el libarchive-cpio-perl libgpm2 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl psmisc linux-sysctl-defaults The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdextrautils cpp-14-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-14-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-14-base:mips64el gcc-14-cross-base-mipsen gcc-14-mips64el-linux-gnuabi64 gcc-14-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libblas-dev:mips64el libblas3:mips64el libc6:mips64el libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:mips64el libcrypt1:mips64el libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:mips64el libdeflate0:mips64el libelf1t64 libfakeroot libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-14-dev:mips64el libgcc-14-dev-mips64el-cross libgcc-s1:mips64el libgcc-s1-mips64el-cross libgfortran5:mips64el libgomp1:mips64el libgomp1-mips64el-cross libicu72 libio-string-perl liblapack-dev:mips64el liblapack3:mips64el liblocale-gettext-perl libmagic-mgc libmagic1t64 libncursesw6 libpipeline1 libproc2-0 libsimde-dev libstdc++-14-dev:mips64el libstdc++-14-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libtext-charwidth-perl libtext-wrapi18n-perl libtool libuchardet0 libunistring5 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd-dev:mips64el libzstd1:mips64el linux-libc-dev-mips64el-cross m4 man-db po-debconf procps sbuild-build-depends-main-dummy:mips64el sensible-utils ucf zlib1g:mips64el zlib1g-dev:mips64el 0 upgraded, 97 newly installed, 0 to remove and 0 not upgraded. Need to get 90.3 MB of archives. After this operation, 391 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [960 B] Get:2 http://localhost:3142/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-7+b1 [15.3 kB] Get:3 http://localhost:3142/debian unstable/main amd64 libncursesw6 amd64 6.5+20250125-2 [135 kB] Get:4 http://localhost:3142/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-7 [64.9 kB] Get:5 http://localhost:3142/debian unstable/main amd64 procps amd64 2:4.0.4-7 [878 kB] Get:6 http://localhost:3142/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:7 http://localhost:3142/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get:8 http://localhost:3142/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get:9 http://localhost:3142/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get:10 http://localhost:3142/debian unstable/main amd64 gettext-base amd64 0.23.1-1 [243 kB] Get:11 http://localhost:3142/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get:12 http://localhost:3142/debian unstable/main amd64 groff-base amd64 1.23.0-7 [1185 kB] Get:13 http://localhost:3142/debian unstable/main amd64 bsdextrautils amd64 2.40.4-3 [92.1 kB] Get:14 http://localhost:3142/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:15 http://localhost:3142/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get:16 http://localhost:3142/debian unstable/main amd64 libtext-charwidth-perl amd64 0.04-11+b4 [9476 B] Get:17 http://localhost:3142/debian unstable/main amd64 libtext-wrapi18n-perl all 0.06-10 [8808 B] Get:18 http://localhost:3142/debian unstable/main amd64 ucf all 3.0049 [42.5 kB] Get:19 http://localhost:3142/debian unstable/main amd64 m4 amd64 1.4.19-5 [294 kB] Get:20 http://localhost:3142/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get:21 http://localhost:3142/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:22 http://localhost:3142/debian unstable/main amd64 automake all 1:1.17-3 [862 kB] Get:23 http://localhost:3142/debian unstable/main amd64 autopoint all 0.23.1-1 [770 kB] Get:24 http://localhost:3142/debian unstable/main amd64 binutils-mips64el-linux-gnuabi64 amd64 2.43.50.20241230-1cross1+nmu1 [2903 kB] Get:25 http://localhost:3142/debian unstable/main amd64 gcc-14-mips64el-linux-gnuabi64-base amd64 14.2.0-13cross1 [48.8 kB] Get:26 http://localhost:3142/debian unstable/main amd64 cpp-14-mips64el-linux-gnuabi64 amd64 14.2.0-13cross1 [9700 kB] Get:27 http://localhost:3142/debian unstable/main amd64 cpp-mips64el-linux-gnuabi64 amd64 4:14.2.0-1 [3408 B] Get:28 http://localhost:3142/debian unstable/main amd64 cross-config all 2.6.20 [16.3 kB] Get:29 http://localhost:3142/debian unstable/main amd64 gcc-14-cross-base-mipsen all 14.2.0-13cross1 [44.1 kB] Get:30 http://localhost:3142/debian unstable/main amd64 libc6-mips64el-cross all 2.40-5cross1 [1145 kB] Get:31 http://localhost:3142/debian unstable/main amd64 libgcc-s1-mips64el-cross all 14.2.0-13cross1 [86.3 kB] Get:32 http://localhost:3142/debian unstable/main amd64 libgomp1-mips64el-cross all 14.2.0-13cross1 [118 kB] Get:33 http://localhost:3142/debian unstable/main amd64 libatomic1-mips64el-cross all 14.2.0-13cross1 [7676 B] Get:34 http://localhost:3142/debian unstable/main amd64 libgcc-14-dev-mips64el-cross all 14.2.0-13cross1 [330 kB] Get:35 http://localhost:3142/debian unstable/main amd64 gcc-14-mips64el-linux-gnuabi64 amd64 14.2.0-13cross1 [18.5 MB] Get:36 http://localhost:3142/debian unstable/main amd64 gcc-mips64el-linux-gnuabi64 amd64 4:14.2.0-1 [1460 B] Get:37 http://localhost:3142/debian unstable/main amd64 libstdc++6-mips64el-cross all 14.2.0-13cross1 [620 kB] Get:38 http://localhost:3142/debian unstable/main amd64 linux-libc-dev-mips64el-cross all 6.12.8-1cross1 [2311 kB] Get:39 http://localhost:3142/debian unstable/main amd64 libc6-dev-mips64el-cross all 2.40-5cross1 [1644 kB] Get:40 http://localhost:3142/debian unstable/main amd64 libstdc++-14-dev-mips64el-cross all 14.2.0-13cross1 [2452 kB] Get:41 http://localhost:3142/debian unstable/main amd64 g++-14-mips64el-linux-gnuabi64 amd64 14.2.0-13cross1 [10.7 MB] Get:42 http://localhost:3142/debian unstable/main amd64 g++-mips64el-linux-gnuabi64 amd64 4:14.2.0-1 [1212 B] Get:43 http://localhost:3142/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-3 [44.8 kB] Get:44 http://localhost:3142/debian unstable/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:45 http://localhost:3142/debian unstable/main amd64 libicu72 amd64 72.1-6 [9421 kB] Get:46 http://localhost:3142/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get:47 http://localhost:3142/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:48 http://localhost:3142/debian unstable/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:49 http://localhost:3142/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-4 [53.4 kB] Get:50 http://localhost:3142/debian unstable/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-5+b2 [314 kB] Get:51 http://localhost:3142/debian unstable/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:52 http://localhost:3142/debian unstable/main amd64 libyaml-perl all 1.31-1 [64.8 kB] Get:53 http://localhost:3142/debian unstable/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:54 http://localhost:3142/debian unstable/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:55 http://localhost:3142/debian unstable/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:56 http://localhost:3142/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:57 http://localhost:3142/debian unstable/main amd64 dpkg-cross all 2.6.20 [25.8 kB] Get:58 http://localhost:3142/debian unstable/main amd64 crossbuild-essential-mips64el all 12.9 [6740 B] Get:59 http://localhost:3142/debian unstable/main amd64 libdebhelper-perl all 13.24.1 [90.9 kB] Get:60 http://localhost:3142/debian unstable/main amd64 libtool all 2.5.4-3 [539 kB] Get:61 http://localhost:3142/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:62 http://localhost:3142/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:63 http://localhost:3142/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get:64 http://localhost:3142/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get:65 http://localhost:3142/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get:66 http://localhost:3142/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:67 http://localhost:3142/debian unstable/main amd64 libunistring5 amd64 1.3-1 [476 kB] Get:68 http://localhost:3142/debian unstable/main amd64 gettext amd64 0.23.1-1 [1680 kB] Get:69 http://localhost:3142/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:70 http://localhost:3142/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:71 http://localhost:3142/debian unstable/main amd64 debhelper all 13.24.1 [920 kB] Get:72 http://localhost:3142/debian unstable/main amd64 libfakeroot amd64 1.37-1 [29.7 kB] Get:73 http://localhost:3142/debian unstable/main amd64 fakeroot amd64 1.37-1 [75.6 kB] Get:74 http://localhost:3142/debian unstable/main mips64el gcc-14-base mips64el 14.2.0-17 [49.1 kB] Get:75 http://localhost:3142/debian unstable/main amd64 help2man amd64 1.49.3 [198 kB] Get:76 http://localhost:3142/debian unstable/main mips64el libgcc-s1 mips64el 14.2.0-17 [86.3 kB] Get:77 http://localhost:3142/debian unstable/main mips64el libc6 mips64el 2.40-7 [2474 kB] Get:78 http://localhost:3142/debian unstable/main mips64el libatomic1 mips64el 14.2.0-17 [7984 B] Get:79 http://localhost:3142/debian unstable/main mips64el libblas3 mips64el 3.12.1-2 [111 kB] Get:80 http://localhost:3142/debian unstable/main mips64el libblas-dev mips64el 3.12.1-2 [130 kB] Get:81 http://localhost:3142/debian unstable/main mips64el libcrypt1 mips64el 1:4.4.38-1 [96.3 kB] Get:82 http://localhost:3142/debian unstable/main mips64el libcrypt-dev mips64el 1:4.4.38-1 [129 kB] Get:83 http://localhost:3142/debian unstable/main mips64el libc6-dev mips64el 2.40-7 [1654 kB] Get:84 http://localhost:3142/debian unstable/main mips64el libdeflate0 mips64el 1.23-1+b1 [37.8 kB] Get:85 http://localhost:3142/debian unstable/main mips64el libdeflate-dev mips64el 1.23-1+b1 [46.8 kB] Get:86 http://localhost:3142/debian unstable/main mips64el libgomp1 mips64el 14.2.0-17 [121 kB] Get:87 http://localhost:3142/debian unstable/main mips64el libgcc-14-dev mips64el 14.2.0-17 [330 kB] Get:88 http://localhost:3142/debian unstable/main mips64el libgfortran5 mips64el 14.2.0-17 [351 kB] Get:89 http://localhost:3142/debian unstable/main mips64el liblapack3 mips64el 3.12.1-2 [1748 kB] Get:90 http://localhost:3142/debian unstable/main mips64el liblapack-dev mips64el 3.12.1-2 [4350 kB] Get:91 http://localhost:3142/debian unstable/main amd64 libsimde-dev all 0.8.2-2 [467 kB] Get:92 http://localhost:3142/debian unstable/main mips64el libstdc++6 mips64el 14.2.0-17 [668 kB] Get:93 http://localhost:3142/debian unstable/main mips64el libstdc++-14-dev mips64el 14.2.0-17 [2453 kB] Get:94 http://localhost:3142/debian unstable/main mips64el libzstd1 mips64el 1.5.6+dfsg-2 [292 kB] Get:95 http://localhost:3142/debian unstable/main mips64el libzstd-dev mips64el 1.5.6+dfsg-2 [375 kB] Get:96 http://localhost:3142/debian unstable/main mips64el zlib1g mips64el 1:1.3.dfsg+really1.3.1-1+b1 [80.3 kB] Get:97 http://localhost:3142/debian unstable/main mips64el zlib1g-dev mips64el 1:1.3.dfsg+really1.3.1-1+b1 [914 kB] Preconfiguring packages ... Fetched 90.3 MB in 0s (193 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 12920 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-7+b1_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-7+b1) ... Selecting previously unselected package libncursesw6:amd64. Preparing to unpack .../01-libncursesw6_6.5+20250125-2_amd64.deb ... Unpacking libncursesw6:amd64 (6.5+20250125-2) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../02-libproc2-0_2%3a4.0.4-7_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-7) ... Selecting previously unselected package procps. Preparing to unpack .../03-procps_2%3a4.0.4-7_amd64.deb ... Unpacking procps (2:4.0.4-7) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../04-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. 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Selecting previously unselected package zlib1g:mips64el. Preparing to unpack .../94-zlib1g_1%3a1.3.dfsg+really1.3.1-1+b1_mips64el.deb ... Unpacking zlib1g:mips64el (1:1.3.dfsg+really1.3.1-1+b1) ... Selecting previously unselected package zlib1g-dev:mips64el. Preparing to unpack .../95-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_mips64el.deb ... Unpacking zlib1g-dev:mips64el (1:1.3.dfsg+really1.3.1-1+b1) ... Selecting previously unselected package sbuild-build-depends-main-dummy:mips64el. Preparing to unpack .../96-sbuild-build-depends-main-dummy_0.invalid.0_mips64el.deb ... Unpacking sbuild-build-depends-main-dummy:mips64el (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-3) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libsimde-dev (0.8.2-2) ... Setting up libtext-charwidth-perl:amd64 (0.04-11+b4) ... Setting up libfile-which-perl (1.27-2) ... Setting up libicu72:amd64 (72.1-6) ... Setting up bsdextrautils (2.40.4-3) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up gcc-14-base:mips64el (14.2.0-17) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.1) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up libc6-mips64el-cross (2.40-5cross1) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-5) ... Setting up file (1:5.45-3+b1) ... Setting up libyaml-perl (1.31-1) ... Setting up binutils-mips64el-linux-gnuabi64 (2.43.50.20241230-1cross1+nmu1) ... Setting up libtext-wrapi18n-perl (0.06-10) ... Setting up libfakeroot:amd64 (1.37-1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up fakeroot (1.37-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.20) ... Setting up gcc-14-cross-base-mipsen (14.2.0-13cross1) ... Setting up libproc2-0:amd64 (2:4.0.4-7) ... Setting up libunistring5:amd64 (1.3-1) ... Setting up autopoint (0.23.1-1) ... Setting up libncursesw6:amd64 (6.5+20250125-2) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up procps (2:4.0.4-7) ... Setting up linux-libc-dev-mips64el-cross (6.12.8-1cross1) ... Setting up gcc-14-mips64el-linux-gnuabi64-base:amd64 (14.2.0-13cross1) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up libgomp1-mips64el-cross (14.2.0-13cross1) ... Setting up libgcc-s1-mips64el-cross (14.2.0-13cross1) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up liblocale-gettext-perl (1.07-7+b1) ... Setting up automake (1:1.17-3) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-1) ... Setting up libatomic1-mips64el-cross (14.2.0-13cross1) ... Setting up libtool (2.5.4-3) ... Setting up cpp-14-mips64el-linux-gnuabi64 (14.2.0-13cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up libgcc-14-dev-mips64el-cross (14.2.0-13cross1) ... Setting up libc6-dev-mips64el-cross (2.40-5cross1) ... Setting up ucf (3.0049) ... Setting up libstdc++6-mips64el-cross (14.2.0-13cross1) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up cpp-mips64el-linux-gnuabi64 (4:14.2.0-1) ... Setting up libstdc++-14-dev-mips64el-cross (14.2.0-13cross1) ... Setting up gcc-14-mips64el-linux-gnuabi64 (14.2.0-13cross1) ... Setting up g++-14-mips64el-linux-gnuabi64 (14.2.0-13cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-4) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-mips64el-linux-gnuabi64 (4:14.2.0-1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-5+b2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Setting up g++-mips64el-linux-gnuabi64 (4:14.2.0-1) ... Setting up debhelper (13.24.1) ... Setting up libxml-simple-perl (2.25-2) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-mips64el (12.9) ... Setting up libgcc-s1:mips64el (14.2.0-17) ... Setting up libc6:mips64el (2.40-7) ... Setting up libstdc++6:mips64el (14.2.0-17) ... Setting up libzstd1:mips64el (1.5.6+dfsg-2) ... Setting up libzstd-dev:mips64el (1.5.6+dfsg-2) ... Setting up libdeflate0:mips64el (1.23-1+b1) ... Setting up zlib1g:mips64el (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libcrypt1:mips64el (1:4.4.38-1) ... Setting up libgomp1:mips64el (14.2.0-17) ... Setting up libblas3:mips64el (3.12.1-2) ... update-alternatives: using /usr/lib/mips64el-linux-gnuabi64/blas/libblas.so.3 to provide /usr/lib/mips64el-linux-gnuabi64/libblas.so.3 (libblas.so.3-mips64el-linux-gnuabi64) in auto mode Setting up libatomic1:mips64el (14.2.0-17) ... Setting up libgfortran5:mips64el (14.2.0-17) ... Setting up libcrypt-dev:mips64el (1:4.4.38-1) ... Setting up libc6-dev:mips64el (2.40-7) ... Setting up libgcc-14-dev:mips64el (14.2.0-17) ... Setting up libdeflate-dev:mips64el (1.23-1+b1) ... Setting up libstdc++-14-dev:mips64el (14.2.0-17) ... Setting up libblas-dev:mips64el (3.12.1-2) ... update-alternatives: using /usr/lib/mips64el-linux-gnuabi64/blas/libblas.so to provide /usr/lib/mips64el-linux-gnuabi64/libblas.so (libblas.so-mips64el-linux-gnuabi64) in auto mode Setting up liblapack3:mips64el (3.12.1-2) ... update-alternatives: using /usr/lib/mips64el-linux-gnuabi64/lapack/liblapack.so.3 to provide /usr/lib/mips64el-linux-gnuabi64/liblapack.so.3 (liblapack.so.3-mips64el-linux-gnuabi64) in auto mode Setting up liblapack-dev:mips64el (3.12.1-2) ... update-alternatives: using /usr/lib/mips64el-linux-gnuabi64/lapack/liblapack.so to provide /usr/lib/mips64el-linux-gnuabi64/liblapack.so (liblapack.so-mips64el-linux-gnuabi64) in auto mode Setting up zlib1g-dev:mips64el (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up sbuild-build-depends-main-dummy:mips64el (0.invalid.0) ... Processing triggers for libc-bin (2.40-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mips64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) amd64 (x86_64) Toolchain package versions: binutils_2.44-1 dpkg-dev_1.22.15 g++-14_14.2.0-17 gcc-14_14.2.0-17 libc6-dev_2.40-7 libstdc++-14-dev_14.2.0-17 libstdc++-14-dev-mips64el-cross_14.2.0-13cross1 libstdc++6_14.2.0-17 libstdc++6-mips64el-cross_14.2.0-13cross1 linux-libc-dev_6.12.13-1 Package versions: apt_2.9.30 autoconf_2.72-3 automake_1:1.17-3 autopoint_0.23.1-1 autotools-dev_20220109.1 base-files_13.6 base-passwd_3.6.6 bash_5.2.37-1 binutils_2.44-1 binutils-common_2.44-1 binutils-mips64el-linux-gnuabi64_2.43.50.20241230-1cross1+nmu1 binutils-x86-64-linux-gnu_2.44-1 bsdextrautils_2.40.4-3 bsdutils_1:2.40.4-3 build-essential_12.12 bzip2_1.0.8-6 coreutils_9.5-1+b1 cpp_4:14.2.0-1 cpp-14_14.2.0-17 cpp-14-mips64el-linux-gnuabi64_14.2.0-13cross1 cpp-14-x86-64-linux-gnu_14.2.0-17 cpp-mips64el-linux-gnuabi64_4:14.2.0-1 cpp-x86-64-linux-gnu_4:14.2.0-1 cross-config_2.6.20 crossbuild-essential-mips64el_12.9 dash_0.5.12-12 debconf_1.5.89 debhelper_13.24.1 debian-archive-keyring_2023.4 debianutils_5.21 dh-autoreconf_20 dh-strip-nondeterminism_1.14.1-2 diffutils_1:3.10-2 dpkg_1.22.15 dpkg-cross_2.6.20 dpkg-dev_1.22.15 dwz_0.15-1+b1 e2fsprogs_1.47.2-1 fakeroot_1.37-1 file_1:5.45-3+b1 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.2.0-17 g++-14-mips64el-linux-gnuabi64_14.2.0-13cross1 g++-14-x86-64-linux-gnu_14.2.0-17 g++-mips64el-linux-gnuabi64_4:14.2.0-1 g++-x86-64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-17 gcc-14-base_14.2.0-17 gcc-14-cross-base-mipsen_14.2.0-13cross1 gcc-14-mips64el-linux-gnuabi64_14.2.0-13cross1 gcc-14-mips64el-linux-gnuabi64-base_14.2.0-13cross1 gcc-14-x86-64-linux-gnu_14.2.0-17 gcc-mips64el-linux-gnuabi64_4:14.2.0-1 gcc-x86-64-linux-gnu_4:14.2.0-1 gettext_0.23.1-1 gettext-base_0.23.1-1 grep_3.11-4 groff-base_1.23.0-7 gzip_1.13-1 help2man_1.49.3 hostname_3.25 init-system-helpers_1.68 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2+b1 libapt-pkg6.0t64_2.9.29 libapt-pkg7.0_2.9.30 libarchive-zip-perl_1.68-1 libasan8_14.2.0-17 libatomic1_14.2.0-17 libatomic1-mips64el-cross_14.2.0-13cross1 libattr1_1:2.5.2-2 libaudit-common_1:4.0.2-2 libaudit1_1:4.0.2-2+b1 libbinutils_2.44-1 libblas-dev_3.12.1-2 libblas3_3.12.1-2 libblkid1_2.40.4-3 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libc-bin_2.40-7 libc-dev-bin_2.40-7 libc6_2.40-7 libc6-dev_2.40-7 libc6-dev-mips64el-cross_2.40-5cross1 libc6-mips64el-cross_2.40-5cross1 libcap-ng0_0.8.5-4 libcap2_1:2.66-5+b1 libcc1-0_14.2.0-17 libcom-err2_1.47.2-1 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-3 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.44-1 libctf0_2.44-1 libdb5.3t64_5.3.28+dfsg2-9 libdebconfclient0_0.277 libdebhelper-perl_13.24.1 libdebian-dpkgcross-perl_2.6.20 libdeflate-dev_1.23-1+b1 libdeflate0_1.23-1+b1 libdpkg-perl_1.22.15 libelf1t64_0.192-4 libext2fs2t64_1.47.2-1 libfakeroot_1.37-1 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.14.1-2 libfile-which-perl_1.27-2 libgcc-14-dev_14.2.0-17 libgcc-14-dev-mips64el-cross_14.2.0-13cross1 libgcc-s1_14.2.0-17 libgcc-s1-mips64el-cross_14.2.0-13cross1 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgfortran5_14.2.0-17 libgmp10_2:6.3.0+dfsg-3 libgomp1_14.2.0-17 libgomp1-mips64el-cross_14.2.0-13cross1 libgprofng0_2.44-1 libhogweed6t64_3.10.1-1 libhwasan0_14.2.0-17 libicu72_72.1-6 libio-string-perl_1.08-4 libisl23_0.27-1 libitm1_14.2.0-17 libjansson4_2.14-2+b3 liblapack-dev_3.12.1-2 liblapack3_3.12.1-2 liblocale-gettext-perl_1.07-7+b1 liblsan0_14.2.0-17 liblz4-1_1.10.0-3 liblzma5_5.6.3-1+b1 libmagic-mgc_1:5.45-3+b1 libmagic1t64_1:5.45-3+b1 libmd0_1.1.0-2+b1 libmount1_2.40.4-3 libmpc3_1.3.1-1+b3 libmpfr6_4.2.1-1+b2 libncursesw6_6.5+20250125-2 libnettle8t64_3.10.1-1 libpam-modules_1.7.0-3 libpam-modules-bin_1.7.0-3 libpam-runtime_1.7.0-3 libpam0g_1.7.0-3 libpcre2-8-0_10.45-1 libperl5.40_5.40.1-2 libpipeline1_1.5.8-1 libproc2-0_2:4.0.4-7 libquadmath0_14.2.0-17 libseccomp2_2.5.5-2 libselinux1_3.8-3 libsemanage-common_3.8-1 libsemanage2_3.8-1 libsepol2_3.8-1 libsframe1_2.44-1 libsimde-dev_0.8.2-2 libsmartcols1_2.40.4-3 libss2_1.47.2-1 libssl3t64_3.4.1-1 libstdc++-14-dev_14.2.0-17 libstdc++-14-dev-mips64el-cross_14.2.0-13cross1 libstdc++6_14.2.0-17 libstdc++6-mips64el-cross_14.2.0-13cross1 libsystemd0_257.3-1 libtext-charwidth-perl_0.04-11+b4 libtext-wrapi18n-perl_0.06-10 libtinfo6_6.5+20250125-2 libtool_2.5.4-3 libtsan2_14.2.0-17 libubsan1_14.2.0-17 libuchardet0_0.0.8-1+b2 libudev1_257.3-1 libunistring5_1.3-1 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zlib1g_1:1.3.dfsg+really1.3.1-1+b1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: plink2 Binary: plink2 Architecture: any Version: 2.00~a6.9-250129+dfsg-1 Maintainer: Debian Med Packaging Team Uploaders: Dylan Aïssi Homepage: https://www.cog-genomics.org/plink/2.0/ Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/plink2 Vcs-Git: https://salsa.debian.org/med-team/plink2.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), help2man, liblapack-dev | liblapack.so, libzstd-dev, zlib1g-dev, libsimde-dev, libdeflate-dev Package-List: plink2 deb science optional arch=any Checksums-Sha1: 2babdf35b8ff9ea6c06470f49ec24c37bbce34b1 1569072 plink2_2.00~a6.9-250129+dfsg.orig.tar.xz 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CONFIG_SITE=/etc/dpkg-cross/cross-config.mips64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.vxusis9q2g/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-598d88ea-d5b8-403a-a1e9-c3aa07f702ef SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa XDG_SESSION_CLASS=user dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -amips64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package plink2 dpkg-buildpackage: info: source version 2.00~a6.9-250129+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Dylan Aïssi dpkg-architecture: warning: specified GNU system type mips64el-linux-gnuabi64 does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mips64el debian/rules clean dh clean --sourcedirectory=build_dynamic/ debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean cd build_dynamic && make -j1 clean make[2]: Entering directory '/<>/build_dynamic' rm -f *.o rm -f plink2 rm -f pgen_compress rm -f pgenlib.a rm -f plink2lib.a rm -f static_pgenlib_test rm -f static_plink2lib_test make[2]: Leaving directory '/<>/build_dynamic' rm -f plink2.1 rm -f pgen_compress.1 make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--sourcedirectory=build_dynamic/ dh_clean -O--sourcedirectory=build_dynamic/ debian/rules binary-arch dh binary-arch --sourcedirectory=build_dynamic/ dh_update_autotools_config -a -O--sourcedirectory=build_dynamic/ dh_autoreconf -a -O--sourcedirectory=build_dynamic/ dh_auto_configure -a -O--sourcedirectory=build_dynamic/ debian/rules override_dh_auto_build-arch make[1]: Entering directory '/<>' dh_auto_build cd build_dynamic && make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=mips64el-linux-gnuabi64-pkg-config CXX=mips64el-linux-gnuabi64-g\+\+ CC=mips64el-linux-gnuabi64-gcc make[2]: Entering directory '/<>/build_dynamic' mips64el-linux-gnuabi64-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -I/usr/include/simde -DIGNORE_BUNDLED_LIBDEFLATE -O2 -std=gnu99 -DZSTD_MULTITHREAD -DIGNORE_BUNDLED_ZSTD -Wall -Wextra -Wshadow -Wformat-security ../include/SFMT.c -c echo mips64el-linux-gnuabi64-gcc -O2 -std=gnu99 -DZSTD_MULTITHREAD -DIGNORE_BUNDLED_ZSTD -Wall -Wextra -Wshadow -Wformat-security -c mips64el-linux-gnuabi64-gcc -O2 -std=gnu99 -DZSTD_MULTITHREAD -DIGNORE_BUNDLED_ZSTD -Wall -Wextra -Wshadow -Wformat-security -c mips64el-linux-gnuabi64-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -I/usr/include/simde -DIGNORE_BUNDLED_LIBDEFLATE -std=c++11 -O2 -DZSTD_MULTITHREAD -DIGNORE_BUNDLED_ZSTD -Wall -Wextra -Wshadow -Wformat-security -Wold-style-cast ../include/plink2_base.cc ../include/plink2_bits.cc ../include/pgenlib_misc.cc ../include/pgenlib_read.cc ../include/pgenlib_write.cc ../include/plink2_bgzf.cc ../include/plink2_bitmap.cc ../include/plink2_fmath.cc ../include/plink2_htable.cc ../include/plink2_memory.cc ../include/plink2_stats.cc ../include/plink2_string.cc ../include/plink2_text.cc ../include/plink2_thread.cc ../include/plink2_zstfile.cc ../plink2.cc ../plink2_adjust.cc ../plink2_cmdline.cc ../plink2_common.cc ../plink2_compress_stream.cc ../plink2_data.cc ../plink2_decompress.cc ../plink2_export.cc ../plink2_export_legacy.cc ../plink2_fasta.cc ../plink2_filter.cc ../plink2_glm.cc ../plink2_glm_linear.cc ../plink2_glm_logistic.cc ../plink2_glm_shared.cc ../plink2_help.cc ../plink2_import.cc ../plink2_import_legacy.cc ../plink2_ld.cc ../plink2_matrix.cc ../plink2_matrix_calc.cc ../plink2_merge.cc ../plink2_misc.cc ../plink2_psam.cc ../plink2_pvar.cc ../plink2_random.cc ../plink2_set.cc -c In file included from ../include/plink2_stats.h:20, from ../plink2_adjust.cc:17: In function ‘const char* plink2::FirstPrechar(const char*, uint32_t)’, inlined from ‘const char* plink2::CurTokenEnd(const char*)’ at ../include/plink2_string.h:837:10, inlined from ‘const char* plink2::TokenLexK0(const char*, const uint32_t*, const uint32_t*, uint32_t, const char**, uint32_t*)’ at ../include/plink2_string.h:1443:46, inlined from ‘plink2::PglErr plink2::AdjustFile(const AdjustFileInfo*, double, double, uint32_t, char*, char*)’ at ../plink2_adjust.cc:812:11: ../include/plink2_string.h:788:16: warning: ‘line_start’ may be used uninitialized [-Wmaybe-uninitialized] 788 | while (ctou32(*str_iter) >= char_code) { | ~~~~~~^~~~~~~~~~~ ../plink2_adjust.cc: In function ‘plink2::PglErr plink2::AdjustFile(const AdjustFileInfo*, double, double, uint32_t, char*, char*)’: ../plink2_adjust.cc:805:19: note: ‘line_start’ was declared here 805 | const char* line_start; | ^~~~~~~~~~ ../plink2_data.cc: In function ‘plink2::PglErr plink2::PvarInfoResplitTmp(const uint32_t*, uint32_t, uint32_t, uint32_t, uint32_t, TextStream*, char*, char*)’: ../plink2_data.cc:8757:47: warning: ‘line_iter’ may be used uninitialized [-Wmaybe-uninitialized] 8757 | const uint32_t info_slen = line_end - line_iter; | ~~~~~~~~~^~~~~~~~~~~ ../plink2_data.cc:8750:15: note: ‘line_iter’ was declared here 8750 | char* line_iter; | ^~~~~~~~~ ../plink2_fasta.cc: In function ‘plink2::PglErr plink2::ProcessFa(const uintptr_t*, const char* const*, const uintptr_t*, const ChrInfo*, const char*, uint32_t, uint32_t, FaFlags, uint32_t, uint32_t, UnsortedVar*, uint32_t*, const char**, AlleleCode*, uintptr_t*, uint32_t*, char*, char*)’: ../plink2_fasta.cc:535:38: warning: ‘line_iter’ may be used uninitialized [-Wmaybe-uninitialized] 535 | unsigned char ucc = line_iter[0]; | ~~~~~~~~~~~^ ../plink2_fasta.cc:526:13: note: ‘line_iter’ was declared here 526 | char* line_iter; | ^~~~~~~~~ In file included from ../include/plink2_stats.h:20, from ../plink2_filter.cc:18: In function ‘int32_t plink2::tokequal_k(const char*, const char*)’, inlined from ‘plink2::PglErr plink2::RmDup(const uintptr_t*, const ChrInfo*, const uint32_t*, const char* const*, const uint32_t*, const uint32_t*, const uintptr_t*, const char* const*, const uintptr_t*, const float*, const uintptr_t*, const uintptr_t*, const char* const*, const char*, const double*, const char*, uint32_t, uint32_t, uint32_t, uint32_t, uintptr_t, uint32_t, RmDupMode, uint32_t, uint32_t, PgenReader*, uintptr_t*, uint32_t*, char*, char*)’ at ../plink2_filter.cc:747:27: ../include/plink2_string.h:448:18: warning: ‘line_iter’ may be used uninitialized [-Wmaybe-uninitialized] 448 | return memequal(s_read, s_const, s_const_slen) && IsSpaceOrEoln(s_read[s_const_slen]); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../plink2_filter.cc: In function ‘plink2::PglErr plink2::RmDup(const uintptr_t*, const ChrInfo*, const uint32_t*, const char* const*, const uint32_t*, const uint32_t*, const uintptr_t*, const char* const*, const uintptr_t*, const float*, const uintptr_t*, const uintptr_t*, const char* const*, const char*, const double*, const char*, uint32_t, uint32_t, uint32_t, uint32_t, uintptr_t, uint32_t, RmDupMode, uint32_t, uint32_t, PgenReader*, uintptr_t*, uint32_t*, char*, char*)’: ../plink2_filter.cc:740:13: note: ‘line_iter’ was declared here 740 | char* line_iter; | ^~~~~~~~~ In file included from /usr/mips64el-linux-gnuabi64/include/c++/14/algorithm:61, from ../include/plink2_string.h:30, from ../plink2_cmdline.h:28, from ../plink2_compress_stream.h:27, from ../plink2_import.cc:19: In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = long unsigned int*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = long unsigned int*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/mips64el-linux-gnuabi64/include/c++/14/bits/stl_algo.h:1812:5, inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = long unsigned int*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/mips64el-linux-gnuabi64/include/c++/14/bits/stl_algo.h:1908:31, inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = long unsigned int*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/mips64el-linux-gnuabi64/include/c++/14/bits/stl_algo.h:1900:5, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = long unsigned int*]’ at /usr/mips64el-linux-gnuabi64/include/c++/14/bits/stl_algo.h:4772:18, inlined from ‘plink2::PglErr plink2::Plink1DosageToPgen(const char*, const char*, const char*, const char*, const Plink1DosageInfo*, const char*, MiscFlags, ImportFlags, uint32_t, FamCol, int32_t, uint32_t, uint32_t, double, uint32_t, char*, char*, ChrInfo*)’ at ../plink2_import.cc:15405:5: /usr/mips64el-linux-gnuabi64/include/c++/14/bits/stl_algo.h:1817:32: warning: array subscript 16 is outside array bounds of ‘uint64_t [6]’ {aka ‘long unsigned int [6]’} [-Warray-bounds=] 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../plink2_import.cc: In function ‘plink2::PglErr plink2::Plink1DosageToPgen(const char*, const char*, const char*, const char*, const Plink1DosageInfo*, const char*, MiscFlags, ImportFlags, uint32_t, FamCol, int32_t, uint32_t, uint32_t, double, uint32_t, char*, char*, ChrInfo*)’: ../plink2_import.cc:15382:14: note: at offset 128 into object ‘parse_table’ of size 48 15382 | uint64_t parse_table[6]; | ^~~~~~~~~~~ mips64el-linux-gnuabi64-g++ -Wdate-time -D_FORTIFY_SOURCE=2 ../plink2_cpu.cc -c mips64el-linux-gnuabi64-g++ SFMT.o plink2_base.o plink2_bits.o pgenlib_misc.o pgenlib_read.o pgenlib_write.o plink2_bgzf.o plink2_bitmap.o plink2_fmath.o plink2_htable.o plink2_memory.o plink2_stats.o plink2_string.o plink2_text.o plink2_thread.o plink2_zstfile.o plink2.o plink2_adjust.o plink2_cmdline.o plink2_common.o plink2_compress_stream.o plink2_data.o plink2_decompress.o plink2_export.o plink2_export_legacy.o plink2_fasta.o plink2_filter.o plink2_glm.o plink2_glm_linear.o plink2_glm_logistic.o plink2_glm_shared.o plink2_help.o plink2_import.o plink2_import_legacy.o plink2_ld.o plink2_matrix.o plink2_matrix_calc.o plink2_merge.o plink2_misc.o plink2_psam.o plink2_pvar.o plink2_random.o plink2_set.o plink2_cpu.o -o plink2"" -llapack -lblas -lm -lpthread -lz -lzstd -Wl,-z,relro -Wl,-z,now -ldeflate mips64el-linux-gnuabi64-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -I/usr/include/simde -DIGNORE_BUNDLED_LIBDEFLATE -std=c++11 -O2 -DZSTD_MULTITHREAD -DIGNORE_BUNDLED_ZSTD -Wall -Wextra -Wshadow -Wformat-security -Wold-style-cast ../include/plink2_base.cc ../include/plink2_bits.cc ../include/pgenlib_misc.cc ../include/pgenlib_read.cc ../include/pgenlib_write.cc ../pgen_compress.cc -o pgen_compress"" make[2]: Leaving directory '/<>/build_dynamic' help2man --no-discard-stderr --name="whole genome SNP analysis" build_dynamic//pgen_compress > pgen_compress.1 make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a -O--sourcedirectory=build_dynamic/" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_testroot -a -O--sourcedirectory=build_dynamic/ dh_prep -a -O--sourcedirectory=build_dynamic/ debian/rules override_dh_auto_install-arch make[1]: Entering directory '/<>' dh_install build_dynamic/plink2 usr/bin/ dh_install build_dynamic/pgen_compress usr/bin/ make[1]: Leaving directory '/<>' dh_installdocs -a -O--sourcedirectory=build_dynamic/ debian/rules override_dh_installchangelogs make[1]: Entering directory '/<>' dh_installchangelogs debian/upstream.docs/upstream.changelog make[1]: Leaving directory '/<>' dh_installexamples -a -O--sourcedirectory=build_dynamic/ debian/rules override_dh_installman make[1]: Entering directory '/<>' dh_installman debian/plink2.1 dh_installman pgen_compress.1 make[1]: Leaving directory '/<>' dh_installsystemduser -a -O--sourcedirectory=build_dynamic/ dh_perl -a -O--sourcedirectory=build_dynamic/ dh_link -a -O--sourcedirectory=build_dynamic/ dh_strip_nondeterminism -a -O--sourcedirectory=build_dynamic/ dh_compress -a -O--sourcedirectory=build_dynamic/ dh_fixperms -a -O--sourcedirectory=build_dynamic/ dh_missing -a -O--sourcedirectory=build_dynamic/ dh_dwz -a -O--sourcedirectory=build_dynamic/ dh_strip -a -O--sourcedirectory=build_dynamic/ dh_makeshlibs -a -O--sourcedirectory=build_dynamic/ dh_shlibdeps -a -O--sourcedirectory=build_dynamic/ dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib64/ld.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib64/ld.so.1.usr-is-merged dh_installdeb -a -O--sourcedirectory=build_dynamic/ debian/rules override_dh_gencontrol make[1]: Entering directory '/<>' dh_gencontrol -- -Vsimde:Built-Using="simde (= 0.8.2-2), " make[1]: Leaving directory '/<>' dh_md5sums -a -O--sourcedirectory=build_dynamic/ dh_builddeb -a -O--sourcedirectory=build_dynamic/ dpkg-deb: building package 'plink2' in '../plink2_2.00~a6.9-250129+dfsg-1_mips64el.deb'. dpkg-deb: building package 'plink2-dbgsym' in '../plink2-dbgsym_2.00~a6.9-250129+dfsg-1_mips64el.deb'. dpkg-genbuildinfo --build=any -O../plink2_2.00~a6.9-250129+dfsg-1_mips64el.buildinfo dpkg-genchanges --build=any -O../plink2_2.00~a6.9-250129+dfsg-1_mips64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2025-02-17T07:13:05Z +------------------------------------------------------------------------------+ | Finished Timed Build Commands | +------------------------------------------------------------------------------+ rm -Rf /<>/ --------------------------------------------------------- I: Finished running 'rm -Rf /<>/'. Finished processing commands. -------------------------------------------------------------------------------- Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ plink2_2.00~a6.9-250129+dfsg-1_mips64el.changes: ------------------------------------------------ Format: 1.8 Date: Fri, 07 Feb 2025 18:00:04 +0100 Source: plink2 Binary: plink2 plink2-dbgsym Built-For-Profiles: cross nocheck Architecture: mips64el Version: 2.00~a6.9-250129+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Dylan Aïssi Description: plink2 - whole-genome association analysis toolset Closes: 1048822 Changes: plink2 (2.00~a6.9-250129+dfsg-1) unstable; urgency=medium . * New upstream version 2.00~a6.9-250129+dfsg * Update string in watch file * Refresh patches * Update upstream changelog * Fix invalid-dep3-format-patch-wrong-last-update * Standards-Version: 4.7.0 (no changes needed) * Fix superfluous-file-pattern * Add a clean target (Closes: #1048822) Checksums-Sha1: 8fef6fa89a213f9ef816ea10d77f22e6ae0293ff 6781900 plink2-dbgsym_2.00~a6.9-250129+dfsg-1_mips64el.deb 5f8a812db7a174cdd203c578376f18612fe8be54 5313 plink2_2.00~a6.9-250129+dfsg-1_mips64el.buildinfo d62fa15527b61f35c3b4be7b5dcc547b8b691344 1280384 plink2_2.00~a6.9-250129+dfsg-1_mips64el.deb Checksums-Sha256: b2fe27a74b0881403e2d117ffa4d30ae85a7a53186973d8c67afc98469b9f31e 6781900 plink2-dbgsym_2.00~a6.9-250129+dfsg-1_mips64el.deb ce07537100d824d92d0501fcf5f09d9dff8b50c67986f598aa2da310ee9b4959 5313 plink2_2.00~a6.9-250129+dfsg-1_mips64el.buildinfo 487e051952288b11f1dcec3705713edba4679dc31b04052cb3ee0eb992902b98 1280384 plink2_2.00~a6.9-250129+dfsg-1_mips64el.deb Files: 5bcc74f9dacb8f32d53957f51edd978a 6781900 debug optional plink2-dbgsym_2.00~a6.9-250129+dfsg-1_mips64el.deb cdeb34d3a3fe7b8e8a295a638e9cd321 5313 science optional plink2_2.00~a6.9-250129+dfsg-1_mips64el.buildinfo ca99918421205d50ae041ea77f2e590f 1280384 science optional plink2_2.00~a6.9-250129+dfsg-1_mips64el.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: plink2 Binary: plink2 plink2-dbgsym Architecture: mips64el Version: 2.00~a6.9-250129+dfsg-1 Checksums-Md5: 5bcc74f9dacb8f32d53957f51edd978a 6781900 plink2-dbgsym_2.00~a6.9-250129+dfsg-1_mips64el.deb ca99918421205d50ae041ea77f2e590f 1280384 plink2_2.00~a6.9-250129+dfsg-1_mips64el.deb Checksums-Sha1: 8fef6fa89a213f9ef816ea10d77f22e6ae0293ff 6781900 plink2-dbgsym_2.00~a6.9-250129+dfsg-1_mips64el.deb d62fa15527b61f35c3b4be7b5dcc547b8b691344 1280384 plink2_2.00~a6.9-250129+dfsg-1_mips64el.deb Checksums-Sha256: b2fe27a74b0881403e2d117ffa4d30ae85a7a53186973d8c67afc98469b9f31e 6781900 plink2-dbgsym_2.00~a6.9-250129+dfsg-1_mips64el.deb 487e051952288b11f1dcec3705713edba4679dc31b04052cb3ee0eb992902b98 1280384 plink2_2.00~a6.9-250129+dfsg-1_mips64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Mon, 17 Feb 2025 07:13:05 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.72-3), automake (= 1:1.17-3), autopoint (= 0.23.1-1), autotools-dev (= 20220109.1), base-files (= 13.6), base-passwd (= 3.6.6), bash (= 5.2.37-1), binutils (= 2.44-1), binutils-common (= 2.44-1), binutils-x86-64-linux-gnu (= 2.44-1), bsdextrautils (= 2.40.4-3), bsdutils (= 1:2.40.4-3), build-essential (= 12.12), bzip2 (= 1.0.8-6), coreutils (= 9.5-1+b1), cpp (= 4:14.2.0-1), cpp-14 (= 14.2.0-17), cpp-14-x86-64-linux-gnu (= 14.2.0-17), cpp-x86-64-linux-gnu (= 4:14.2.0-1), dash (= 0.5.12-12), debconf (= 1.5.89), debhelper (= 13.24.1), debianutils (= 5.21), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.1-2), diffutils (= 1:3.10-2), dpkg (= 1.22.15), dpkg-dev (= 1.22.15), dwz (= 0.15-1+b1), file (= 1:5.45-3+b1), findutils (= 4.10.0-3), g++ (= 4:14.2.0-1), g++-14 (= 14.2.0-17), g++-14-x86-64-linux-gnu (= 14.2.0-17), g++-x86-64-linux-gnu (= 4:14.2.0-1), gcc (= 4:14.2.0-1), gcc-14 (= 14.2.0-17), gcc-14-base (= 14.2.0-17), gcc-14-x86-64-linux-gnu (= 14.2.0-17), gcc-x86-64-linux-gnu (= 4:14.2.0-1), gettext (= 0.23.1-1), gettext-base (= 0.23.1-1), grep (= 3.11-4), groff-base (= 1.23.0-7), gzip (= 1.13-1), help2man (= 1.49.3), hostname (= 3.25), init-system-helpers (= 1.68), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-2+b1), libarchive-zip-perl (= 1.68-1), libasan8 (= 14.2.0-17), libatomic1 (= 14.2.0-17), libattr1 (= 1:2.5.2-2), libaudit-common (= 1:4.0.2-2), libaudit1 (= 1:4.0.2-2+b1), libbinutils (= 2.44-1), libblas-dev (= 3.12.1-2), libblas3 (= 3.12.1-2), libblkid1 (= 2.40.4-3), libbz2-1.0 (= 1.0.8-6), libc-bin (= 2.40-7), libc-dev-bin (= 2.40-7), libc6 (= 2.40-7), libc6-dev (= 2.40-7), libcap-ng0 (= 0.8.5-4), libcap2 (= 1:2.66-5+b1), libcc1-0 (= 14.2.0-17), libcrypt-dev (= 1:4.4.38-1), libcrypt1 (= 1:4.4.38-1), libctf-nobfd0 (= 2.44-1), libctf0 (= 2.44-1), libdb5.3t64 (= 5.3.28+dfsg2-9), libdebconfclient0 (= 0.277), libdebhelper-perl (= 13.24.1), libdeflate-dev (= 1.23-1+b1), libdeflate0 (= 1.23-1+b1), libdpkg-perl (= 1.22.15), libelf1t64 (= 0.192-4), libfile-stripnondeterminism-perl (= 1.14.1-2), libgcc-14-dev (= 14.2.0-17), libgcc-s1 (= 14.2.0-17), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgfortran5 (= 14.2.0-17), libgmp10 (= 2:6.3.0+dfsg-3), libgomp1 (= 14.2.0-17), libgprofng0 (= 2.44-1), libhwasan0 (= 14.2.0-17), libicu72 (= 72.1-6), libisl23 (= 0.27-1), libitm1 (= 14.2.0-17), libjansson4 (= 2.14-2+b3), liblapack-dev (= 3.12.1-2), liblapack3 (= 3.12.1-2), liblocale-gettext-perl (= 1.07-7+b1), liblsan0 (= 14.2.0-17), liblzma5 (= 5.6.3-1+b1), libmagic-mgc (= 1:5.45-3+b1), libmagic1t64 (= 1:5.45-3+b1), libmd0 (= 1.1.0-2+b1), libmount1 (= 2.40.4-3), libmpc3 (= 1.3.1-1+b3), libmpfr6 (= 4.2.1-1+b2), libpam-modules (= 1.7.0-3), libpam-modules-bin (= 1.7.0-3), libpam-runtime (= 1.7.0-3), libpam0g (= 1.7.0-3), libpcre2-8-0 (= 10.45-1), libperl5.40 (= 5.40.1-2), libpipeline1 (= 1.5.8-1), libquadmath0 (= 14.2.0-17), libseccomp2 (= 2.5.5-2), libselinux1 (= 3.8-3), libsframe1 (= 2.44-1), libsimde-dev (= 0.8.2-2), libsmartcols1 (= 2.40.4-3), libssl3t64 (= 3.4.1-1), libstdc++-14-dev (= 14.2.0-17), libstdc++6 (= 14.2.0-17), libsystemd0 (= 257.3-1), libtinfo6 (= 6.5+20250125-2), libtool (= 2.5.4-3), libtsan2 (= 14.2.0-17), libubsan1 (= 14.2.0-17), libuchardet0 (= 0.0.8-1+b2), libudev1 (= 257.3-1), libunistring5 (= 1.3-1), libuuid1 (= 2.40.4-3), libxml2 (= 2.12.7+dfsg+really2.9.14-0.2+b1), libzstd-dev (= 1.5.6+dfsg-2), libzstd1 (= 1.5.6+dfsg-2), linux-libc-dev (= 6.12.13-1), m4 (= 1.4.19-5), make (= 4.4.1-1), man-db (= 2.13.0-1), mawk (= 1.3.4.20250131-1), ncurses-base (= 6.5+20250125-2), ncurses-bin (= 6.5+20250125-2), openssl-provider-legacy (= 3.4.1-1), patch (= 2.7.6-7), perl (= 5.40.1-2), perl-base (= 5.40.1-2), perl-modules-5.40 (= 5.40.1-2), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.24), sysvinit-utils (= 3.14-1), tar (= 1.35+dfsg-3.1), util-linux (= 2.40.4-3), xz-utils (= 5.6.3-1+b1), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1738947604" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ plink2-dbgsym_2.00~a6.9-250129+dfsg-1_mips64el.deb -------------------------------------------------- new Debian package, version 2.0. size 6781900 bytes: control archive=660 bytes. 444 bytes, 12 lines control 302 bytes, 3 lines md5sums Package: plink2-dbgsym Source: plink2 Version: 2.00~a6.9-250129+dfsg-1 Auto-Built-Package: debug-symbols Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 10382 Depends: plink2 (= 2.00~a6.9-250129+dfsg-1) Section: debug Priority: optional Description: debug symbols for plink2 Build-Ids: 7ebb5778de60f5d3baf278ca960a4632b2b21079 f9244955a4836ffa766bae8c85c7cdf58a65dfb9 drwxr-xr-x root/root 0 2025-02-07 17:00 ./ drwxr-xr-x root/root 0 2025-02-07 17:00 ./usr/ drwxr-xr-x root/root 0 2025-02-07 17:00 ./usr/lib/ drwxr-xr-x root/root 0 2025-02-07 17:00 ./usr/lib/debug/ drwxr-xr-x root/root 0 2025-02-07 17:00 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2025-02-07 17:00 ./usr/lib/debug/.build-id/7e/ -rw-r--r-- root/root 9568520 2025-02-07 17:00 ./usr/lib/debug/.build-id/7e/bb5778de60f5d3baf278ca960a4632b2b21079.debug drwxr-xr-x root/root 0 2025-02-07 17:00 ./usr/lib/debug/.build-id/f9/ -rw-r--r-- root/root 994408 2025-02-07 17:00 ./usr/lib/debug/.build-id/f9/244955a4836ffa766bae8c85c7cdf58a65dfb9.debug drwxr-xr-x root/root 0 2025-02-07 17:00 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2025-02-07 17:00 ./usr/lib/debug/.dwz/mips64el-linux-gnuabi64/ -rw-r--r-- root/root 52440 2025-02-07 17:00 ./usr/lib/debug/.dwz/mips64el-linux-gnuabi64/plink2.debug drwxr-xr-x root/root 0 2025-02-07 17:00 ./usr/share/ drwxr-xr-x root/root 0 2025-02-07 17:00 ./usr/share/doc/ lrwxrwxrwx root/root 0 2025-02-07 17:00 ./usr/share/doc/plink2-dbgsym -> plink2 plink2_2.00~a6.9-250129+dfsg-1_mips64el.deb ------------------------------------------- new Debian package, version 2.0. size 1280384 bytes: control archive=1368 bytes. 1147 bytes, 22 lines control 969 bytes, 14 lines md5sums Package: plink2 Version: 2.00~a6.9-250129+dfsg-1 Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 3727 Depends: libblas3 | libblas.so.3, libc6 (>= 2.34), libdeflate0 (>= 1.0), liblapack3 | liblapack.so.3, libzstd1 (>= 1.5.5), zlib1g (>= 1:1.1.4) Built-Using: simde (= 0.8.2-2) Section: science Priority: optional Homepage: https://www.cog-genomics.org/plink/2.0/ Description: whole-genome association analysis toolset plink expects as input the data from SNP (single nucleotide polymorphism) chips of many individuals and their phenotypical description of a disease. It finds associations of single or pairs of DNA variations with a phenotype and can retrieve SNP annotation from an online source. . SNPs can evaluated individually or as pairs for their association with the disease phenotypes. The joint investigation of copy number variations is supported. A variety of statistical tests have been implemented. . plink2 is a comprehensive update of plink and plink1.9 with new algorithms and new methods, faster and less memory consumer than the first plink. drwxr-xr-x root/root 0 2025-02-07 17:00 ./ drwxr-xr-x root/root 0 2025-02-07 17:00 ./usr/ drwxr-xr-x root/root 0 2025-02-07 17:00 ./usr/bin/ -rwxr-xr-x root/root 375648 2025-02-07 17:00 ./usr/bin/pgen_compress -rwxr-xr-x root/root 3355448 2025-02-07 17:00 ./usr/bin/plink2 drwxr-xr-x root/root 0 2025-02-07 17:00 ./usr/share/ drwxr-xr-x root/root 0 2025-02-07 17:00 ./usr/share/doc/ drwxr-xr-x root/root 0 2025-02-07 17:00 ./usr/share/doc/plink2/ -rw-r--r-- root/root 278 2025-02-07 17:00 ./usr/share/doc/plink2/README.test -rw-r--r-- root/root 1744 2025-02-07 17:00 ./usr/share/doc/plink2/changelog.Debian.gz -rw-r--r-- root/root 26510 2025-02-07 17:00 ./usr/share/doc/plink2/changelog.gz -rw-r--r-- root/root 7467 2025-02-07 17:00 ./usr/share/doc/plink2/copyright drwxr-xr-x root/root 0 2025-02-07 17:00 ./usr/share/doc/plink2/examples/ -rw-r--r-- root/root 325 2025-02-07 17:00 ./usr/share/doc/plink2/examples/README -rw-r--r-- root/root 267 2025-02-07 17:00 ./usr/share/doc/plink2/examples/expected.plink.assoc -rw-r--r-- root/root 126 2025-02-07 17:00 ./usr/share/doc/plink2/examples/expected.plink.frq -rw-r--r-- root/root 27 2025-02-07 17:00 ./usr/share/doc/plink2/examples/toy.map -rw-r--r-- root/root 58 2025-02-07 17:00 ./usr/share/doc/plink2/examples/toy.ped -rw-r--r-- root/root 530 2025-02-07 17:00 ./usr/share/doc/plink2/run-unit-test drwxr-xr-x root/root 0 2025-02-07 17:00 ./usr/share/man/ drwxr-xr-x root/root 0 2025-02-07 17:00 ./usr/share/man/man1/ -rw-r--r-- root/root 369 2025-02-07 17:00 ./usr/share/man/man1/pgen_compress.1.gz -rw-r--r-- root/root 29200 2025-02-07 17:00 ./usr/share/man/man1/plink2.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: warning: root directory /<>/sbuild-build-depends-lintian-dummy has unusual owner or group 1000:119 dpkg-deb: hint: you might need to pass --root-owner-group, see for further details dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1400 B] Get:5 copy:/<>/apt_archive ./ Packages [1470 B] Fetched 3485 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... /usr/lib/apt/solvers/apt: /lib/x86_64-linux-gnu/libapt-private.so.0.0: no version information available (required by /usr/lib/apt/solvers/apt) The solver encountered an error of type: ERR_UNSOLVABLE The following information might help you to understand what is wrong: Unsatisfied dependencies: Execute external solver... Some packages could not be installed. This may mean that you have requested an impossible situation or if you are using the unstable distribution that some required packages have not yet been created or been moved out of Incoming. The following information may help to resolve the situation: The following packages have unmet dependencies: sbuild-build-depends-lintian-dummy:mips64el : Depends: lintian:amd64 E: External solver failed with: Unsatisfied dependencies: apt-get failed. E: Package installation failed Not removing build depends: cloned chroot in use +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: n/a Build-Time: 187 Distribution: unstable Foreign Architectures: mips64el Host Architecture: mips64el Install-Time: 11 Job: plink2_2.00~a6.9-250129+dfsg-1 Lintian: error Machine Architecture: amd64 Package: plink2 Package-Time: 210 Source-Version: 2.00~a6.9-250129+dfsg-1 Space: n/a Status: successful Version: 2.00~a6.9-250129+dfsg-1 -------------------------------------------------------------------------------- Finished at 2025-02-17T07:13:05Z Build needed 00:03:30, no disk space