sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on gcc131.bak.milne.osuosl.org +==============================================================================+ | primer3 2.4.0-2 (armhf) Wed, 06 Mar 2019 18:52:04 +0000 | +==============================================================================+ Package: primer3 Version: 2.4.0-2 Source Version: 2.4.0-2 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-0a2d26b9-691c-422d-b229-465dbc026d29' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [242 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-03-06-0809.52.pdiff [2134 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-03-06-1412.06.pdiff [3400 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-03-06-1412.06.pdiff [3400 B] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-03-06-0809.52.pdiff [2325 B] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-03-06-1412.06.pdiff [3052 B] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-03-06-1412.06.pdiff [3052 B] Get:8 http://debian.oregonstate.edu/debian unstable/main armhf Packages [8091 kB] Fetched 8400 kB in 2s (3962 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: e2fsprogs libcom-err2 libext2fs2 libss2 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 938 kB of archives. After this operation, 4096 B of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 libext2fs2 amd64 1.44.6-1 [221 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 e2fsprogs amd64 1.44.6-1 [576 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libcom-err2 amd64 1.44.6-1 [68.5 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libss2 amd64 1.44.6-1 [72.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 938 kB in 0s (20.4 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11914 files and directories currently installed.) Preparing to unpack .../libext2fs2_1.44.6-1_amd64.deb ... Unpacking libext2fs2:amd64 (1.44.6-1) over (1.44.5-1) ... Setting up libext2fs2:amd64 (1.44.6-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11914 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.44.6-1_amd64.deb ... Unpacking e2fsprogs (1.44.6-1) over (1.44.5-1) ... Preparing to unpack .../libcom-err2_1.44.6-1_amd64.deb ... Unpacking libcom-err2:amd64 (1.44.6-1) over (1.44.5-1) ... Preparing to unpack .../libss2_1.44.6-1_amd64.deb ... Unpacking libss2:amd64 (1.44.6-1) over (1.44.5-1) ... Setting up libcom-err2:amd64 (1.44.6-1) ... Setting up libss2:amd64 (1.44.6-1) ... Setting up e2fsprogs (1.44.6-1) ... Processing triggers for libc-bin (2.28-8) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'primer3' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/primer3.git Please use: git clone https://salsa.debian.org/med-team/primer3.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 31.8 MB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main primer3 2.4.0-2 (dsc) [2117 B] Get:2 http://debian.oregonstate.edu/debian unstable/main primer3 2.4.0-2 (tar) [31.7 MB] Get:3 http://debian.oregonstate.edu/debian unstable/main primer3 2.4.0-2 (diff) [12.1 kB] Fetched 31.8 MB in 0s (81.7 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/primer3-sg28K3/primer3-2.4.0' with '<>' I: NOTICE: Log filtering will replace 'build/primer3-sg28K3' with '<>' +------------------------------------------------------------------------------+ | Install crossbuild-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64 Filtered Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64 dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-zPZZaM/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-zPZZaM/apt_archive ./ InRelease Get:2 copy:/<>/resolver-zPZZaM/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-zPZZaM/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-zPZZaM/apt_archive ./ Sources [363 B] Get:5 copy:/<>/resolver-zPZZaM/apt_archive ./ Packages [451 B] Fetched 1771 B in 0s (94.3 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils-arm-linux-gnueabihf cpp-8-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf dpkg-cross file g++-8-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf-base gcc-8-cross-base gcc-arm-linux-gnueabihf libasan5-armhf-cross libatomic1-armhf-cross libc6-armhf-cross libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-armhf-cross libgcc1-armhf-cross libgomp1-armhf-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-armhf-cross libstdc++6-armhf-cross libubsan1-armhf-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-armhf-cross sensible-utils ucf Suggested packages: binutils-doc gcc-8-locales cpp-doc binutils-multiarch gcc-8-doc libstdc++6-8-dbg-armhf-cross libgcc1-dbg-armhf-cross libgomp1-dbg-armhf-cross libitm1-dbg-armhf-cross libatomic1-dbg-armhf-cross libasan5-dbg-armhf-cross liblsan0-dbg-armhf-cross libtsan0-dbg-armhf-cross libubsan1-dbg-armhf-cross libmpx2-dbg-armhf-cross libquadmath0-dbg-armhf-cross manpages-dev autoconf automake libtool flex bison gdb-arm-linux-gnueabihf gcc-doc libyaml-shell-perl Recommended packages: libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl The following NEW packages will be installed: binutils-arm-linux-gnueabihf cpp-8-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf dpkg-cross file g++-8-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf-base gcc-8-cross-base gcc-arm-linux-gnueabihf libasan5-armhf-cross libatomic1-armhf-cross libc6-armhf-cross libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-armhf-cross libgcc1-armhf-cross libgomp1-armhf-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-armhf-cross libstdc++6-armhf-cross libubsan1-armhf-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-armhf-cross sbuild-build-depends-core-dummy:armhf sensible-utils ucf 0 upgraded, 44 newly installed, 0 to remove and 0 not upgraded. Need to get 41.8 MB of archives. After this operation, 152 MB of additional disk space will be used. Get:1 copy:/<>/resolver-zPZZaM/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [872 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.35-4 [242 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.35-4 [117 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.35-4 [66.3 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabihf amd64 2.31.1-15 [2832 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-arm-linux-gnueabihf-base amd64 8.3.0-2cross1 [190 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-8-arm-linux-gnueabihf amd64 8.3.0-2cross1 [6554 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabihf amd64 4:8.3.0-1 [16.5 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-2 [39.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-cross-base all 8.3.0-2cross1 [185 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armhf-cross all 2.28-7cross1 [1170 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-armhf-cross all 1:8.3.0-2cross1 [37.1 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armhf-cross all 8.3.0-2cross1 [63.1 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armhf-cross all 8.3.0-2cross1 [6580 B] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armhf-cross all 8.3.0-2cross1 [301 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-armhf-cross all 8.3.0-2cross1 [330 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armhf-cross all 8.3.0-2cross1 [103 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-8-dev-armhf-cross all 8.3.0-2cross1 [612 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-arm-linux-gnueabihf amd64 8.3.0-2cross1 [6974 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabihf amd64 4:8.3.0-1 [1456 B] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armhf-cross all 4.19.20-1cross1 [1212 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armhf-cross all 2.28-7cross1 [2148 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-8-dev-armhf-cross all 8.3.0-2cross1 [1556 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 g++-8-arm-linux-gnueabihf amd64 8.3.0-2cross1 [7133 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabihf amd64 4:8.3.0-1 [1180 B] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.1-6 [8292 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.00+dfsg-1 [58.6 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1 [344 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.27-1 [66.8 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-2 [38.5 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-2 [49.3 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armhf all 12.6 [6572 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 41.8 MB in 1s (76.0 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11914 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-3+b4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-3+b4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.35-4_amd64.deb ... Unpacking libmagic-mgc (1:5.35-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.35-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-4) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.35-4_amd64.deb ... Unpacking file (1:5.35-4) ... Selecting previously unselected package ucf. Preparing to unpack .../05-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package binutils-arm-linux-gnueabihf. Preparing to unpack .../06-binutils-arm-linux-gnueabihf_2.31.1-15_amd64.deb ... Unpacking binutils-arm-linux-gnueabihf (2.31.1-15) ... Selecting previously unselected package gcc-8-arm-linux-gnueabihf-base:amd64. Preparing to unpack .../07-gcc-8-arm-linux-gnueabihf-base_8.3.0-2cross1_amd64.deb ... Unpacking gcc-8-arm-linux-gnueabihf-base:amd64 (8.3.0-2cross1) ... Selecting previously unselected package cpp-8-arm-linux-gnueabihf. Preparing to unpack .../08-cpp-8-arm-linux-gnueabihf_8.3.0-2cross1_amd64.deb ... Unpacking cpp-8-arm-linux-gnueabihf (8.3.0-2cross1) ... Selecting previously unselected package cpp-arm-linux-gnueabihf. Preparing to unpack .../09-cpp-arm-linux-gnueabihf_4%3a8.3.0-1_amd64.deb ... Unpacking cpp-arm-linux-gnueabihf (4:8.3.0-1) ... Selecting previously unselected package cross-config. Preparing to unpack .../10-cross-config_2.6.15-2_all.deb ... Unpacking cross-config (2.6.15-2) ... Selecting previously unselected package gcc-8-cross-base. Preparing to unpack .../11-gcc-8-cross-base_8.3.0-2cross1_all.deb ... Unpacking gcc-8-cross-base (8.3.0-2cross1) ... Selecting previously unselected package libc6-armhf-cross. Preparing to unpack .../12-libc6-armhf-cross_2.28-7cross1_all.deb ... Unpacking libc6-armhf-cross (2.28-7cross1) ... Selecting previously unselected package libgcc1-armhf-cross. Preparing to unpack .../13-libgcc1-armhf-cross_1%3a8.3.0-2cross1_all.deb ... Unpacking libgcc1-armhf-cross (1:8.3.0-2cross1) ... Selecting previously unselected package libgomp1-armhf-cross. Preparing to unpack .../14-libgomp1-armhf-cross_8.3.0-2cross1_all.deb ... Unpacking libgomp1-armhf-cross (8.3.0-2cross1) ... Selecting previously unselected package libatomic1-armhf-cross. Preparing to unpack .../15-libatomic1-armhf-cross_8.3.0-2cross1_all.deb ... Unpacking libatomic1-armhf-cross (8.3.0-2cross1) ... Selecting previously unselected package libstdc++6-armhf-cross. Preparing to unpack .../16-libstdc++6-armhf-cross_8.3.0-2cross1_all.deb ... Unpacking libstdc++6-armhf-cross (8.3.0-2cross1) ... Selecting previously unselected package libasan5-armhf-cross. Preparing to unpack .../17-libasan5-armhf-cross_8.3.0-2cross1_all.deb ... Unpacking libasan5-armhf-cross (8.3.0-2cross1) ... Selecting previously unselected package libubsan1-armhf-cross. Preparing to unpack .../18-libubsan1-armhf-cross_8.3.0-2cross1_all.deb ... Unpacking libubsan1-armhf-cross (8.3.0-2cross1) ... Selecting previously unselected package libgcc-8-dev-armhf-cross. Preparing to unpack .../19-libgcc-8-dev-armhf-cross_8.3.0-2cross1_all.deb ... Unpacking libgcc-8-dev-armhf-cross (8.3.0-2cross1) ... Selecting previously unselected package gcc-8-arm-linux-gnueabihf. Preparing to unpack .../20-gcc-8-arm-linux-gnueabihf_8.3.0-2cross1_amd64.deb ... Unpacking gcc-8-arm-linux-gnueabihf (8.3.0-2cross1) ... Selecting previously unselected package gcc-arm-linux-gnueabihf. 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Preparing to unpack .../31-libxml-namespacesupport-perl_1.12-1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../32-libxml-sax-base-perl_1.09-1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../33-libxml-sax-perl_1.00+dfsg-1_all.deb ... Unpacking libxml-sax-perl (1.00+dfsg-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../34-libxml-libxml-perl_2.0134+dfsg-1_amd64.deb ... Unpacking libxml-libxml-perl (2.0134+dfsg-1) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../35-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../36-libyaml-perl_1.27-1_all.deb ... Unpacking libyaml-perl (1.27-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../37-libconfig-auto-perl_0.44-1_all.deb ... Unpacking libconfig-auto-perl (0.44-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../38-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../39-libfile-homedir-perl_1.004-1_all.deb ... Unpacking libfile-homedir-perl (1.004-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../40-libdebian-dpkgcross-perl_2.6.15-2_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-2) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../41-dpkg-cross_2.6.15-2_all.deb ... Unpacking dpkg-cross (2.6.15-2) ... Selecting previously unselected package crossbuild-essential-armhf. Preparing to unpack .../42-crossbuild-essential-armhf_12.6_all.deb ... Unpacking crossbuild-essential-armhf (12.6) ... Selecting previously unselected package sbuild-build-depends-core-dummy:armhf. Preparing to unpack .../43-sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy:armhf (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libfile-which-perl (1.23-1) ... Setting up libc6-armhf-cross (2.28-7cross1) ... Setting up libmagic-mgc (1:5.35-4) ... Setting up gcc-8-cross-base (8.3.0-2cross1) ... Setting up libmagic1:amd64 (1:5.35-4) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up file (1:5.35-4) ... Setting up libatomic1-armhf-cross (8.3.0-2cross1) ... Setting up libyaml-perl (1.27-1) ... Setting up libicu63:amd64 (63.1-6) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cross-config (2.6.15-2) ... Setting up libgcc1-armhf-cross (1:8.3.0-2cross1) ... Setting up gcc-8-arm-linux-gnueabihf-base:amd64 (8.3.0-2cross1) ... Setting up linux-libc-dev-armhf-cross (4.19.20-1cross1) ... Setting up sensible-utils (0.0.12) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up binutils-arm-linux-gnueabihf (2.31.1-15) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up cpp-8-arm-linux-gnueabihf (8.3.0-2cross1) ... Setting up libgomp1-armhf-cross (8.3.0-2cross1) ... Setting up libc6-dev-armhf-cross (2.28-7cross1) ... Setting up libstdc++6-armhf-cross (8.3.0-2cross1) ... Setting up libubsan1-armhf-cross (8.3.0-2cross1) ... Setting up ucf (3.0038+nmu1) ... Setting up cpp-arm-linux-gnueabihf (4:8.3.0-1) ... Setting up libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libasan5-armhf-cross (8.3.0-2cross1) ... Setting up libgcc-8-dev-armhf-cross (8.3.0-2cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++-8-dev-armhf-cross (8.3.0-2cross1) ... Setting up gcc-8-arm-linux-gnueabihf (8.3.0-2cross1) ... Setting up gcc-arm-linux-gnueabihf (4:8.3.0-1) ... Setting up g++-8-arm-linux-gnueabihf (8.3.0-2cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-arm-linux-gnueabihf (4:8.3.0-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-2) ... Setting up dpkg-cross (2.6.15-2) ... Setting up crossbuild-essential-armhf (12.6) ... Setting up sbuild-build-depends-core-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.28-8) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any all) Setup apt archive ----------------- dpkg-deb: building package 'sbuild-build-depends-essential-dummy' in '/<>/resolver-zPZZaM/apt_archive/sbuild-build-depends-essential-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-zPZZaM/apt_archive ./ InRelease Get:2 copy:/<>/resolver-zPZZaM/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-zPZZaM/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-zPZZaM/apt_archive ./ Sources [485 B] Get:5 copy:/<>/resolver-zPZZaM/apt_archive ./ Packages [568 B] Fetched 2016 B in 0s (0 B/s) Reading package lists... Reading package lists... Install essential build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-essential-dummy:armhf 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 840 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-zPZZaM/apt_archive ./ sbuild-build-depends-essential-dummy 0.invalid.0 [840 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 840 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-essential-dummy:armhf. (Reading database ... 14960 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-essential-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-essential-dummy:armhf (0.invalid.0) ... Setting up sbuild-build-depends-essential-dummy:armhf (0.invalid.0) ... +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~) Filtered Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~) dpkg-deb: building package 'sbuild-build-depends-primer3-dummy' in '/<>/resolver-zPZZaM/apt_archive/sbuild-build-depends-primer3-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-primer3-dummy dpkg-scanpackages: info: Wrote 3 entries to output Packages file. Ign:1 copy:/<>/resolver-zPZZaM/apt_archive ./ InRelease Get:2 copy:/<>/resolver-zPZZaM/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-zPZZaM/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-zPZZaM/apt_archive ./ Sources [635 B] Get:5 copy:/<>/resolver-zPZZaM/apt_archive ./ Packages [713 B] Fetched 2311 B in 0s (128 kB/s) Reading package lists... Reading package lists... Install primer3 build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:armhf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libatomic1:armhf libbsd0 libc6:armhf libc6-dev:armhf libcroco3 libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:armhf libgcc1:armhf libglib2.0-0 libgomp1:armhf libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:armhf libstdc++6:armhf libtool libubsan1:armhf libuchardet0 linux-libc-dev:armhf m4 man-db po-debconf Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armhf libc-l10n:armhf locales:armhf manpages-dev:armhf libstdc++-8-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:armhf libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpm2 libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:armhf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libatomic1:armhf libbsd0 libc6:armhf libc6-dev:armhf libcroco3 libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:armhf libgcc1:armhf libglib2.0-0 libgomp1:armhf libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:armhf libstdc++6:armhf libtool libubsan1:armhf libuchardet0 linux-libc-dev:armhf m4 man-db po-debconf sbuild-build-depends-primer3-dummy:armhf 0 upgraded, 40 newly installed, 0 to remove and 0 not upgraded. Need to get 18.5 MB of archives. After this operation, 79.1 MB of additional disk space will be used. Get:1 copy:/<>/resolver-zPZZaM/apt_archive ./ sbuild-build-depends-primer3-dummy 0.invalid.0 [876 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.9.1-2 [99.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-10 [547 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.1.1-1 [19.7 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.1.1-1 [13.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1 [160 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.12-3 [78.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.58.3-1 [1258 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20181013-2 [102 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.1.1 [1016 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main armhf gcc-8-base armhf 8.3.0-2 [190 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main armhf libgcc1 armhf 1:8.3.0-2 [37.1 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main armhf libc6 armhf 2.28-8 [2387 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++6 armhf 8.3.0-2 [337 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main armhf libasan5 armhf 8.3.0-2 [335 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main armhf libatomic1 armhf 8.3.0-2 [6752 B] Get:35 http://debian.oregonstate.edu/debian unstable/main armhf linux-libc-dev armhf 4.19.20-1 [1124 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main armhf libc6-dev armhf 2.28-8 [2149 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main armhf libgomp1 armhf 8.3.0-2 [64.7 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main armhf libubsan1 armhf 8.3.0-2 [103 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-8-dev armhf 8.3.0-2 [613 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++-8-dev armhf 8.3.0-2 [1584 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 18.5 MB in 0s (73.3 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 14960 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.19.8.1-9_amd64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../07-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../08-m4_1.4.18-2_amd64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../09-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../10-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../11-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../12-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package libtool. Preparing to unpack .../13-libtool_2.4.6-10_all.deb ... Unpacking libtool (2.4.6-10) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../14-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../15-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../16-libfile-stripnondeterminism-perl_1.1.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../17-dh-strip-nondeterminism_1.1.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.1-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../18-libelf1_0.176-1_amd64.deb ... Unpacking libelf1:amd64 (0.176-1) ... Selecting previously unselected package dwz. Preparing to unpack .../19-dwz_0.12-3_amd64.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../20-libglib2.0-0_2.58.3-1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.58.3-1) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../21-libcroco3_0.6.12-3_amd64.deb ... Unpacking libcroco3:amd64 (0.6.12-3) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../22-libncurses6_6.1+20181013-2_amd64.deb ... Unpacking libncurses6:amd64 (6.1+20181013-2) ... Selecting previously unselected package gettext. Preparing to unpack .../23-gettext_0.19.8.1-9_amd64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../24-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../25-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../26-debhelper_12.1.1_all.deb ... Unpacking debhelper (12.1.1) ... Selecting previously unselected package gcc-8-base:armhf. Preparing to unpack .../27-gcc-8-base_8.3.0-2_armhf.deb ... Unpacking gcc-8-base:armhf (8.3.0-2) ... Selecting previously unselected package libgcc1:armhf. Preparing to unpack .../28-libgcc1_1%3a8.3.0-2_armhf.deb ... Unpacking libgcc1:armhf (1:8.3.0-2) ... Selecting previously unselected package libc6:armhf. Preparing to unpack .../29-libc6_2.28-8_armhf.deb ... Unpacking libc6:armhf (2.28-8) ... Selecting previously unselected package libstdc++6:armhf. Preparing to unpack .../30-libstdc++6_8.3.0-2_armhf.deb ... Unpacking libstdc++6:armhf (8.3.0-2) ... Selecting previously unselected package libasan5:armhf. Preparing to unpack .../31-libasan5_8.3.0-2_armhf.deb ... Unpacking libasan5:armhf (8.3.0-2) ... Selecting previously unselected package libatomic1:armhf. Preparing to unpack .../32-libatomic1_8.3.0-2_armhf.deb ... Unpacking libatomic1:armhf (8.3.0-2) ... Selecting previously unselected package linux-libc-dev:armhf. Preparing to unpack .../33-linux-libc-dev_4.19.20-1_armhf.deb ... Unpacking linux-libc-dev:armhf (4.19.20-1) ... Selecting previously unselected package libc6-dev:armhf. Preparing to unpack .../34-libc6-dev_2.28-8_armhf.deb ... Unpacking libc6-dev:armhf (2.28-8) ... Selecting previously unselected package libgomp1:armhf. Preparing to unpack .../35-libgomp1_8.3.0-2_armhf.deb ... Unpacking libgomp1:armhf (8.3.0-2) ... Selecting previously unselected package libubsan1:armhf. Preparing to unpack .../36-libubsan1_8.3.0-2_armhf.deb ... Unpacking libubsan1:armhf (8.3.0-2) ... Selecting previously unselected package libgcc-8-dev:armhf. Preparing to unpack .../37-libgcc-8-dev_8.3.0-2_armhf.deb ... Unpacking libgcc-8-dev:armhf (8.3.0-2) ... Selecting previously unselected package libstdc++-8-dev:armhf. Preparing to unpack .../38-libstdc++-8-dev_8.3.0-2_armhf.deb ... Unpacking libstdc++-8-dev:armhf (8.3.0-2) ... Selecting previously unselected package sbuild-build-depends-primer3-dummy:armhf. Preparing to unpack .../39-sbuild-build-depends-primer3-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-primer3-dummy:armhf (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:amd64 (2.58.3-1) ... No schema files found: doing nothing. Setting up linux-libc-dev:armhf (4.19.20-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up autotools-dev (20180224.1) ... Setting up libncurses6:amd64 (6.1+20181013-2) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up gcc-8-base:armhf (8.3.0-2) ... Setting up autopoint (0.19.8.1-9) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libbsd0:amd64 (0.9.1-2) ... Setting up libelf1:amd64 (0.176-1) ... Setting up libfile-stripnondeterminism-perl (1.1.1-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libtool (2.4.6-10) ... Setting up m4 (1.4.18-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libc6:armhf (2.28-8) ... Setting up libc6-dev:armhf (2.28-8) ... Setting up libgcc1:armhf (1:8.3.0-2) ... Setting up libgomp1:armhf (8.3.0-2) ... Setting up dh-autoreconf (19) ... Setting up libatomic1:armhf (8.3.0-2) ... Setting up dh-strip-nondeterminism (1.1.1-1) ... Setting up libstdc++6:armhf (8.3.0-2) ... Setting up debhelper (12.1.1) ... Setting up libasan5:armhf (8.3.0-2) ... Setting up libubsan1:armhf (8.3.0-2) ... Setting up libgcc-8-dev:armhf (8.3.0-2) ... Setting up libstdc++-8-dev:armhf (8.3.0-2) ... Setting up sbuild-build-depends-primer3-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.28-8) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.31.1-15 dpkg-dev_1.19.5 g++-8_8.3.0-2 gcc-8_8.3.0-2 libc6-dev_2.28-8 libstdc++-8-dev_8.3.0-2 libstdc++-8-dev-armhf-cross_8.3.0-2cross1 libstdc++6_8.3.0-2 libstdc++6-armhf-cross_8.3.0-2cross1 linux-libc-dev_4.19.20-1 Package versions: adduser_3.118 apt_1.8.0~rc4 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1 base-passwd_3.5.46 bash_5.0-2 binutils_2.31.1-15 binutils-arm-linux-gnueabihf_2.31.1-15 binutils-common_2.31.1-15 binutils-x86-64-linux-gnu_2.31.1-15 bsdmainutils_11.1.2+b1 bsdutils_1:2.33.1-0.1 build-essential_12.6 bzip2_1.0.6-9 coreutils_8.30-3 cpp_4:8.3.0-1 cpp-8_8.3.0-2 cpp-8-arm-linux-gnueabihf_8.3.0-2cross1 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libtasn1-6_4.13-3 libtinfo6_6.1+20181013-2 libtool_2.4.6-10 libtsan0_8.3.0-2 libubsan1_8.3.0-2 libubsan1-armhf-cross_8.3.0-2cross1 libuchardet0_0.0.6-3 libudev1_241-1 libunistring2_0.9.10-1 libuuid1_2.33.1-0.1 libxml-libxml-perl_2.0134+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.00+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-perl_1.27-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.20-1 linux-libc-dev-armhf-cross_4.19.20-1cross1 login_1:4.5-1.1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17+b3 mount_2.33.1-0.1 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-4 perl-base_5.28.1-4 perl-modules-5.28_5.28.1-4 po-debconf_1.0.21 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-essential-dummy_0.invalid.0 sbuild-build-depends-primer3-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-8 tar_1.30+dfsg-5 tzdata_2018i-2 ucf_3.0038+nmu1 util-linux_2.33.1-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Tue May 29 17:16:23 2018 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tillea@rki.de" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./primer3_2.4.0-2.dsc dpkg-source: info: extracting primer3 in /<> dpkg-source: info: unpacking primer3_2.4.0.orig.tar.gz dpkg-source: info: unpacking primer3_2.4.0-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying primer_thermodynamic_parameters_path_2_etc.patch dpkg-source: info: applying gcc-7.patch dpkg-source: info: applying p3test_fix_exit_status.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-0a2d26b9-691c-422d-b229-465dbc026d29 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package primer3 dpkg-buildpackage: info: source version 2.4.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Liubov Chuprikova dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --sourcedirectory=src dh_auto_clean -O--sourcedirectory=src cd src && make -j1 clean make[1]: Entering directory '/<>/src' rm -f *.o primer3_core ntdpal ntthal oligotm long_seq_tm_test primer3_masker *~ libprimer3.a libdpal.a libthal.a liboligotm.a libmasker.a libprimer3.so.1.0.0 libdpal.a.so.1.0.0 libthal.a.so.1.0.0 liboligotm.so.1.2.0 libmasker.a.so.1.0.0 example.for example.rev example.int core ../*~ cd ../test/; make clean make[2]: Entering directory '/<>/test' echo; echo; echo 'CLEAN UP TEST DIRECTORIES'; echo; echo; CLEAN UP TEST DIRECTORIES rm -rf primer_list_tmp/* rm -rf primer1_list_tmp/* rm -rf primer1_th_list_tmp/* rm -rf th-w-other-tasks_list_tmp/* rm -f primer_global_err/*.tmp primer_global_err/*.tmp2 primer_global_err/*.bak rm -f *.tmp *.bak *.tmp.err *~ rm -f hyb_probe_only.for hyb_probe_only.int rm -f right_only.for right_only.rev left_only.for rm -f pcr_primers_and_io.int pcr_primers_and_io.rev pcr_primers_and_io.for rm -f pcr_primers.rev pcr_primers.for rm -f pick_primer_list_and_file_flag_th_[1-4].for pick_primer_list_and_file_flag_th_[1-4].rev rm -f pick_primer_list_and_file_flag_th_[1-4].int rm -f syntax[0-1][0-9].for syntax[0-1][0-9].int syntax[0-1][0-9].rev rm -f oligotm.*.valg # valgrind output from oligotm_test.pl --valgrind rm -f ntdpal.*.valg # valgrind output from dpal_test.pl --valgrind rm -f ntthal.*.valg # valgrind output from thal_test.pl --valgrind rm -f masker.*.valg # valgrind output from thal_test.pl --valgrind rm -f oligotm.*.valg.* # valgrind output from oligotm_test.pl --valgrind rm -f ntdpal.*.valg.* # valgrind output from dpal_test.pl --valgrind rm -f ntthal.*.valg.* # valgrind output from thal_test.pl --valgrind rm -f masker.*.valg.* # valgrind output from masker_test.pl --valgrind rm -f *.vg */*.vg # valgrind output from p3test{,z}.pl --valgrind rm -f *.vg.core.* # core files from crashed valgrind test rm -f ./core # in case we crashed and left a core file make[2]: Leaving directory '/<>/test' make[1]: Leaving directory '/<>/src' dh_autoreconf_clean -O--sourcedirectory=src dh_clean -O--sourcedirectory=src debian/rules build-arch dh build-arch --sourcedirectory=src dh_update_autotools_config -a -O--sourcedirectory=src dh_autoreconf -a -O--sourcedirectory=src dh_auto_configure -a -O--sourcedirectory=src debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build -- 'CPP=$(CXX)' cd src && make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabihf-pkg-config CXX=arm-linux-gnueabihf-g\+\+ CC=arm-linux-gnueabihf-gcc CPP=\$\(CXX\) make[2]: Entering directory '/<>/src' arm-linux-gnueabihf-g++ -c -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -D__USE_FIXED_PROTOTYPES__ -O2 primer3_boulder_main.c arm-linux-gnueabihf-g++ -c -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -D__USE_FIXED_PROTOTYPES__ -O2 -o format_output.o format_output.c arm-linux-gnueabihf-g++ -c -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -D__USE_FIXED_PROTOTYPES__ -O2 -o read_boulder.o read_boulder.c arm-linux-gnueabihf-g++ -c -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -D__USE_FIXED_PROTOTYPES__ -O2 -o print_boulder.o print_boulder.c arm-linux-gnueabihf-g++ -c -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -D__USE_FIXED_PROTOTYPES__ -O2 masker.c arm-linux-gnueabihf-g++ -c -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -D__USE_FIXED_PROTOTYPES__ -O2 -Wno-deprecated -o libprimer3.o libprimer3.c arm-linux-gnueabihf-g++ -c -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -D__USE_FIXED_PROTOTYPES__ -O2 -o p3_seq_lib.o p3_seq_lib.c ar rv libprimer3.a libprimer3.o p3_seq_lib.o ar: creating libprimer3.a a - libprimer3.o a - p3_seq_lib.o ranlib libprimer3.a arm-linux-gnueabihf-g++ -c -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -D__USE_FIXED_PROTOTYPES__ -O2 -o dpal_primer.o dpal.c dpal.c: In function 'void print_align(const unsigned char*, const unsigned char*, int (*)[1600][3], int, int, const dpal_args*)': dpal.c:1036:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation] for(i=j;i>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -D__USE_FIXED_PROTOTYPES__ -O2 -ffloat-store -o thal_primer.o thal.c thal.c: In function 'void tableStartATS(double, double (*)[5])': thal.c:1200:4: warning: this 'for' clause does not guard... [-Wmisleading-indentation] for (i = 0; i < 5; ++i) ^~~ thal.c:1203:6: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' atpS[0][3] = atpS[3][0] = atp_value; ^~~~ thal.c: In function 'void tableStartATH(double, double (*)[5])': thal.c:1212:4: warning: this 'for' clause does not guard... [-Wmisleading-indentation] for (i = 0; i < 5; ++i) ^~~ thal.c:1216:6: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' atpH[0][3] = atpH[3][0] = atp_value; ^~~~ ar rv libthal.a thal_primer.o ar: creating libthal.a a - thal_primer.o ranlib libthal.a arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -D__USE_FIXED_PROTOTYPES__ -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o oligotm.o oligotm.c oligotm.c: In function 'oligotm': oligotm.c:424:44: warning: comparison between pointer and zero character constant [-Wpointer-compare] for(i = 0; i <= len && d != NULL && d != '\0';) { ^~ oligotm.c:424:42: note: did you mean to dereference the pointer? for(i = 0; i <= len && d != NULL && d != '\0';) { ^ ar rv liboligotm.a oligotm.o ar: creating liboligotm.a a - oligotm.o ranlib liboligotm.a ar rv libmasker.a masker.o ar: creating libmasker.a a - masker.o ranlib libmasker.a arm-linux-gnueabihf-g++ -Wl,-z,relro -Wl,-z,now -g -o primer3_core primer3_boulder_main.o format_output.o read_boulder.o print_boulder.o masker.o libprimer3.a libdpal.a libthal.a liboligotm.a libmasker.a -lm arm-linux-gnueabihf-g++ -c -g -Wall -D__USE_FIXED_PROTOTYPES__ -o ntdpal_main.o ntdpal_main.c arm-linux-gnueabihf-g++ -c -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -D__USE_FIXED_PROTOTYPES__ -O2 -o dpal.o dpal.c dpal.c: In function 'void print_align(const unsigned char*, const unsigned char*, int (*)[1600][3], int, int, const dpal_args*)': dpal.c:1036:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation] for(i=j;i>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -D__USE_FIXED_PROTOTYPES__ -O2 -o thal_main.o thal_main.c arm-linux-gnueabihf-g++ -c -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -D__USE_FIXED_PROTOTYPES__ -O2 -ffloat-store -o thal.o thal.c thal.c: In function 'void tableStartATS(double, double (*)[5])': thal.c:1200:4: warning: this 'for' clause does not guard... [-Wmisleading-indentation] for (i = 0; i < 5; ++i) ^~~ thal.c:1203:6: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' atpS[0][3] = atpS[3][0] = atp_value; ^~~~ thal.c: In function 'void tableStartATH(double, double (*)[5])': thal.c:1212:4: warning: this 'for' clause does not guard... [-Wmisleading-indentation] for (i = 0; i < 5; ++i) ^~~ thal.c:1216:6: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' atpH[0][3] = atpH[3][0] = atp_value; ^~~~ arm-linux-gnueabihf-g++ -Wl,-z,relro -Wl,-z,now -g -o ntthal thal_main.o thal.o -lm arm-linux-gnueabihf-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -D__USE_FIXED_PROTOTYPES__ -O2 -Wl,-z,relro -Wl,-z,now -g -o oligotm oligotm_main.c liboligotm.a -lm arm-linux-gnueabihf-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -D__USE_FIXED_PROTOTYPES__ -O2 -o long_seq_tm_test long_seq_tm_test_main.c oligotm.o -lm arm-linux-gnueabihf-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -D__USE_FIXED_PROTOTYPES__ -O2 -o primer3_masker masker_main.c libprimer3.a libdpal.a libthal.a liboligotm.a libmasker.a -lm make[2]: Leaving directory '/<>/src' make[1]: Leaving directory '/<>' debian/rules override_dh_auto_test make[1]: Entering directory '/<>' dh_auto_test --sourcedirectory=test dh clean --sourcedirectory=test dh_auto_clean -O--sourcedirectory=test cd test && make -j1 clean make[2]: Entering directory '/<>/test' echo; echo; echo 'CLEAN UP TEST DIRECTORIES'; echo; echo; CLEAN UP TEST DIRECTORIES rm -rf primer_list_tmp/* rm -rf primer1_list_tmp/* rm -rf primer1_th_list_tmp/* rm -rf th-w-other-tasks_list_tmp/* rm -f primer_global_err/*.tmp primer_global_err/*.tmp2 primer_global_err/*.bak rm -f *.tmp *.bak *.tmp.err *~ rm -f hyb_probe_only.for hyb_probe_only.int rm -f right_only.for right_only.rev left_only.for rm -f pcr_primers_and_io.int pcr_primers_and_io.rev pcr_primers_and_io.for rm -f pcr_primers.rev pcr_primers.for rm -f pick_primer_list_and_file_flag_th_[1-4].for pick_primer_list_and_file_flag_th_[1-4].rev rm -f pick_primer_list_and_file_flag_th_[1-4].int rm -f syntax[0-1][0-9].for syntax[0-1][0-9].int syntax[0-1][0-9].rev rm -f oligotm.*.valg # valgrind output from oligotm_test.pl --valgrind rm -f ntdpal.*.valg # valgrind output from dpal_test.pl --valgrind rm -f ntthal.*.valg # valgrind output from thal_test.pl --valgrind rm -f masker.*.valg # valgrind output from thal_test.pl --valgrind rm -f oligotm.*.valg.* # valgrind output from oligotm_test.pl --valgrind rm -f ntdpal.*.valg.* # valgrind output from dpal_test.pl --valgrind rm -f ntthal.*.valg.* # valgrind output from thal_test.pl --valgrind rm -f masker.*.valg.* # valgrind output from masker_test.pl --valgrind rm -f *.vg */*.vg # valgrind output from p3test{,z}.pl --valgrind rm -f *.vg.core.* # core files from crashed valgrind test rm -f ./core # in case we crashed and left a core file make[2]: Leaving directory '/<>/test' dh_autoreconf_clean -O--sourcedirectory=test dh_clean -O--sourcedirectory=test make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --sourcedirectory=src dh_testroot -a -O--sourcedirectory=src dh_prep -a -O--sourcedirectory=src dh_auto_install -a -O--sourcedirectory=src dh_install -a -O--sourcedirectory=src dh_installdocs -a -O--sourcedirectory=src dh_installchangelogs -a -O--sourcedirectory=src debian/rules override_dh_installexamples make[1]: Entering directory '/<>' dh_installexamples mkdir -p /<>/debian/primer3-examples/usr/share/doc/primer3/examples/test; mkdir -p /<>/debian/primer3-examples/usr/share/doc/primer3/examples/src; mkdir -p /<>/debian/primer3-examples/usr/share/doc/primer3/examples/settings_files; mkdir -p /<>/debian/primer3-examples/usr/share/doc/primer3/examples/kmer_lists; cp -aR ./test/* /<>/debian/primer3-examples/usr/share/doc/primer3/examples/test; cp -aR ./src/humrep_and_simple.txt /<>/debian/primer3-examples/usr/share/doc/primer3/examples/src; cp -a settings_files/primer*.txt /<>/debian/primer3-examples/usr/share/doc/primer3/examples/settings_files; cp -aR ./kmer_lists/*.list /<>/debian/primer3-examples/usr/share/doc/primer3/examples/kmer_lists; chmod -x /<>/debian/primer3-examples/usr/share/doc/primer3/examples/test/thal*; sed -i 's#/usr/local/bin/perl#/usr/bin/perl#' /<>/debian/primer3-examples/usr/share/doc/primer3/examples/test/long_seq_tm_test.pl ; sed -i 's#/usr/local/bin/perl#/usr/bin/perl#' /<>/debian/primer3-examples/usr/share/doc/primer3/examples/test/vgrep.pl ; make[1]: Leaving directory '/<>' dh_installman -a -O--sourcedirectory=src dh_installinit -a -O--sourcedirectory=src dh_perl -a -O--sourcedirectory=src dh_link -a -O--sourcedirectory=src dh_strip_nondeterminism -a -O--sourcedirectory=src dh_compress -a -O--sourcedirectory=src dh_fixperms -a -O--sourcedirectory=src dh_missing -a -O--sourcedirectory=src dh_strip -a -O--sourcedirectory=src dh_makeshlibs -a -O--sourcedirectory=src dh_shlibdeps -a -O--sourcedirectory=src dpkg-shlibdeps: warning: debian/primer3/usr/bin/primer3_core contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb -a -O--sourcedirectory=src dh_gencontrol -a -O--sourcedirectory=src dh_md5sums -a -O--sourcedirectory=src dh_builddeb -a -O--sourcedirectory=src dpkg-deb: building package 'primer3' in '../primer3_2.4.0-2_armhf.deb'. dpkg-deb: building package 'primer3-dbgsym' in '../primer3-dbgsym_2.4.0-2_armhf.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../primer3_2.4.0-2_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-03-06T18:53:03Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/resolver-zPZZaM/apt_archive/sbuild-build-depends-lintian-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-lintian-dummy sbuild-build-depends-primer3-dummy dpkg-scanpackages: info: Wrote 4 entries to output Packages file. Ign:1 copy:/<>/resolver-zPZZaM/apt_archive ./ InRelease Get:2 copy:/<>/resolver-zPZZaM/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-zPZZaM/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-zPZZaM/apt_archive ./ Sources [754 B] Get:5 copy:/<>/resolver-zPZZaM/apt_archive ./ Packages [825 B] Fetched 2542 B in 0s (160 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libdata-dump-perl ca-certificates libhtml-template-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libunicode-utf8-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:armhf t1utils 0 upgraded, 48 newly installed, 0 to remove and 0 not upgraded. Need to get 7781 kB of archives. After this operation, 20.7 MB of additional disk space will be used. Get:1 copy:/<>/resolver-zPZZaM/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 5.6 [19.4 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 7.0-5 [70.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.62-1 [33.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.2-1 [49.4 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.13-1 [512 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.27.2-1 [640 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.13-1 [867 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.34+b1 [71.2 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.40-1 [222 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.21-1+b3 [13.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.41-1+b1 [14.6 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1b-1 [1531 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 3 [6782 B] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.85-2+b1 [308 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.060-3 [207 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.18-1 [88.5 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.19-1 [372 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.39-1 [74.5 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.72-1 [262 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b5 [33.7 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-1 [101 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b4 [64.2 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libparse-debianchangelog-perl all 1.2.0-13 [59.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.76+repack-1 [33.1 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2 [90.4 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.9.1 [1193 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7781 kB in 0s (47.2 MB/s) Selecting previously unselected package netbase. (Reading database ... 17672 files and directories currently installed.) Preparing to unpack .../00-netbase_5.6_all.deb ... Unpacking netbase (5.6) ... Selecting previously unselected package readline-common. Preparing to unpack .../01-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.62-1_amd64.deb ... Unpacking diffstat (1.62-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.2-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.2-1) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../04-libreadline7_7.0-5_amd64.deb ... Unpacking libreadline7:amd64 (7.0-5) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.13-1_amd64.deb ... Unpacking gpgconf (2.2.13-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../06-libsqlite3-0_3.27.2-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.27.2-1) ... Selecting previously unselected package gpg. Preparing to unpack .../07-gpg_2.2.13-1_amd64.deb ... Unpacking gpg (2.2.13-1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../08-libapt-pkg-perl_0.1.34+b1_amd64.deb ... Unpacking libapt-pkg-perl (0.1.34+b1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../09-libcapture-tiny-perl_0.48-1_all.deb ... Unpacking libcapture-tiny-perl (0.48-1) ... Selecting previously unselected package libhtml-tagset-perl. Preparing to unpack .../10-libhtml-tagset-perl_3.20-3_all.deb ... Unpacking libhtml-tagset-perl (3.20-3) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../11-liburi-perl_1.76-1_all.deb ... Unpacking liburi-perl (1.76-1) ... Selecting previously unselected package libhtml-parser-perl. Preparing to unpack .../12-libhtml-parser-perl_3.72-3+b3_amd64.deb ... Unpacking libhtml-parser-perl (3.72-3+b3) ... Selecting previously unselected package libcgi-pm-perl. Preparing to unpack .../13-libcgi-pm-perl_4.40-1_all.deb ... Unpacking libcgi-pm-perl (4.40-1) ... Selecting previously unselected package libsub-name-perl. Preparing to unpack .../14-libsub-name-perl_0.21-1+b3_amd64.deb ... Unpacking libsub-name-perl (0.21-1+b3) ... Selecting previously unselected package libclass-accessor-perl. Preparing to unpack .../15-libclass-accessor-perl_0.51-1_all.deb ... Unpacking libclass-accessor-perl (0.51-1) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../16-libclone-perl_0.41-1+b1_amd64.deb ... Unpacking libclone-perl (0.41-1+b1) ... Selecting previously unselected package libdigest-hmac-perl. Preparing to unpack .../17-libdigest-hmac-perl_1.03+dfsg-2_all.deb ... Unpacking libdigest-hmac-perl (1.03+dfsg-2) ... 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Unpacking libnet-smtp-ssl-perl (1.04-1) ... Selecting previously unselected package libmailtools-perl. Preparing to unpack .../24-libmailtools-perl_2.18-1_all.deb ... Unpacking libmailtools-perl (2.18-1) ... Selecting previously unselected package libnet-ip-perl. Preparing to unpack .../25-libnet-ip-perl_1.26-2_all.deb ... Unpacking libnet-ip-perl (1.26-2) ... Selecting previously unselected package libnet-dns-perl. Preparing to unpack .../26-libnet-dns-perl_1.19-1_all.deb ... Unpacking libnet-dns-perl (1.19-1) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../27-libnet-domain-tld-perl_1.75-1_all.deb ... Unpacking libnet-domain-tld-perl (1.75-1) ... Selecting previously unselected package libemail-valid-perl. Preparing to unpack .../28-libemail-valid-perl_1.202-1_all.deb ... Unpacking libemail-valid-perl (1.202-1) ... Selecting previously unselected package libexporter-tiny-perl. 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I: Lintian run was successful. +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ primer3_2.4.0-2_armhf.changes: ------------------------------ Format: 1.8 Date: Mon, 28 May 2018 13:44:30 +0000 Source: primer3 Binary: primer3 primer3-dbgsym Built-For-Profiles: cross nocheck Architecture: armhf Version: 2.4.0-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Liubov Chuprikova Description: primer3 - tool to design flanking oligo nucleotides for DNA amplification Closes: 890993 Changes: primer3 (2.4.0-2) unstable; urgency=medium . [ Liubov Chuprikova ] * Team upload. * Skip tests that fail on big endian Closes: #890993 * Added d/README.source with explanation why some tests are skipped * debian/patches/p3test_fix_exit_status.patch: Fix test to show correct exit status . [ Andreas Tille ] * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 Checksums-Sha1: 02b3112033f6573fd5660ca2882e4fd01018f8b5 412788 primer3-dbgsym_2.4.0-2_armhf.deb fa631864d5e981117afca02e002ea88e9acdc7f5 4427 primer3_2.4.0-2_armhf.buildinfo 3e4bdbb8aa7946ee8655a68676b2f5967bbac1e5 165000 primer3_2.4.0-2_armhf.deb Checksums-Sha256: 2d68d7ad47ba258cbf5597eb2a34fc926151f3e1f128b27187ac200fd3a36c20 412788 primer3-dbgsym_2.4.0-2_armhf.deb 942902f6b9fd607a679aae915811146189ee777f5d6e67f4385a473b5ef59ef2 4427 primer3_2.4.0-2_armhf.buildinfo 9e8cd7f27813bc18c7989d61cd4e04b4bc194ea6fcf9538f03d8416e0c9da892 165000 primer3_2.4.0-2_armhf.deb Files: b15b1fe86265564c0e27e6a62f418906 412788 debug optional primer3-dbgsym_2.4.0-2_armhf.deb dfd727422ead235e9e7152533d4a0d74 4427 science optional primer3_2.4.0-2_armhf.buildinfo c385998a70b48fea10d67cf6b21aef93 165000 science optional primer3_2.4.0-2_armhf.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: primer3 Binary: primer3 primer3-examples Architecture: armhf Version: 2.4.0-2 Checksums-Md5: b15b1fe86265564c0e27e6a62f418906 412788 primer3-dbgsym_2.4.0-2_armhf.deb c385998a70b48fea10d67cf6b21aef93 165000 primer3_2.4.0-2_armhf.deb Checksums-Sha1: 02b3112033f6573fd5660ca2882e4fd01018f8b5 412788 primer3-dbgsym_2.4.0-2_armhf.deb 3e4bdbb8aa7946ee8655a68676b2f5967bbac1e5 165000 primer3_2.4.0-2_armhf.deb Checksums-Sha256: 2d68d7ad47ba258cbf5597eb2a34fc926151f3e1f128b27187ac200fd3a36c20 412788 primer3-dbgsym_2.4.0-2_armhf.deb 9e8cd7f27813bc18c7989d61cd4e04b4bc194ea6fcf9538f03d8416e0c9da892 165000 primer3_2.4.0-2_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Wed, 06 Mar 2019 18:53:03 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 10.1), base-passwd (= 3.5.46), bash (= 5.0-2), binutils (= 2.31.1-15), binutils-common (= 2.31.1-15), binutils-x86-64-linux-gnu (= 2.31.1-15), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.33.1-0.1), build-essential (= 12.6), bzip2 (= 1.0.6-9), coreutils (= 8.30-3), cpp (= 4:8.3.0-1), cpp-8 (= 8.3.0-2), dash (= 0.5.10.2-5), debconf (= 1.5.71), debhelper (= 12.1.1), debianutils (= 4.8.6.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.1.1-1), diffutils (= 1:3.7-2), dpkg (= 1.19.5), dpkg-dev (= 1.19.5), dwz (= 0.12-3), fdisk (= 2.33.1-0.1), file (= 1:5.35-4), findutils (= 4.6.0+git+20190209-2), g++ (= 4:8.3.0-1), g++-8 (= 8.3.0-2), gcc (= 4:8.3.0-1), gcc-8 (= 8.3.0-2), gcc-8-base (= 8.3.0-2), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), grep (= 3.3-1), groff-base (= 1.22.4-3), gzip (= 1.9-3), hostname (= 3.21), init-system-helpers (= 1.56+nmu1), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-4), libarchive-zip-perl (= 1.64-1), libasan5 (= 8.3.0-2), libatomic1 (= 8.3.0-2), libattr1 (= 1:2.4.48-4), libaudit-common (= 1:2.8.4-2), libaudit1 (= 1:2.8.4-2), libbinutils (= 2.31.1-15), libblkid1 (= 2.33.1-0.1), libbsd0 (= 0.9.1-2), libbz2-1.0 (= 1.0.6-9), libc-bin (= 2.28-8), libc-dev-bin (= 2.28-8), libc6 (= 2.28-8), libc6-dev (= 2.28-8), libcap-ng0 (= 0.7.9-2), libcc1-0 (= 8.3.0-2), libcroco3 (= 0.6.12-3), libdb5.3 (= 5.3.28+dfsg1-0.5), libdebconfclient0 (= 0.248), libdpkg-perl (= 1.19.5), libelf1 (= 0.176-1), libfdisk1 (= 2.33.1-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.1.1-1), libgcc-8-dev (= 8.3.0-2), libgcc1 (= 1:8.3.0-2), libgcrypt20 (= 1.8.4-5), libgdbm-compat4 (= 1.18.1-3), libgdbm6 (= 1.18.1-3), libglib2.0-0 (= 2.58.3-1), libgmp10 (= 2:6.1.2+dfsg-4), libgomp1 (= 8.3.0-2), libgpg-error0 (= 1.35-1), libicu63 (= 63.1-6), libisl19 (= 0.20-2), libitm1 (= 8.3.0-2), liblsan0 (= 8.3.0-2), liblz4-1 (= 1.8.3-1), liblzma5 (= 5.2.4-1), libmagic-mgc (= 1:5.35-4), libmagic1 (= 1:5.35-4), libmount1 (= 2.33.1-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-2), libncurses6 (= 6.1+20181013-2), libncursesw6 (= 6.1+20181013-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre3 (= 2:8.39-11), libperl5.28 (= 5.28.1-4), libpipeline1 (= 1.5.1-2), libquadmath0 (= 8.3.0-2), libseccomp2 (= 2.3.3-4), libselinux1 (= 2.8-1+b1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.33.1-0.1), libstdc++-8-dev (= 8.3.0-2), libstdc++6 (= 8.3.0-2), libsystemd0 (= 241-1), libtinfo6 (= 6.1+20181013-2), libtool (= 2.4.6-10), libtsan0 (= 8.3.0-2), libubsan1 (= 8.3.0-2), libuchardet0 (= 0.0.6-3), libudev1 (= 241-1), libunistring2 (= 0.9.10-1), libuuid1 (= 2.33.1-0.1), libxml2 (= 2.9.4+dfsg1-7+b3), linux-libc-dev (= 4.19.20-1), login (= 1:4.5-1.1), m4 (= 1.4.18-2), make (= 4.2.1-1.2), man-db (= 2.8.5-2), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20181013-2), ncurses-bin (= 6.1+20181013-2), patch (= 2.7.6-3), perl (= 5.28.1-4), perl-base (= 5.28.1-4), perl-modules-5.28 (= 5.28.1-4), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.93-8), tar (= 1.30+dfsg-5), util-linux (= 2.33.1-0.1), xz-utils (= 5.2.4-1), zlib1g (= 1:1.2.11.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="POSIX" SOURCE_DATE_EPOCH="1527515070" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ primer3-dbgsym_2.4.0-2_armhf.deb -------------------------------- new Debian package, version 2.0. size 412788 bytes: control archive=700 bytes. 493 bytes, 12 lines control 424 bytes, 4 lines md5sums Package: primer3-dbgsym Source: primer3 Version: 2.4.0-2 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 468 Depends: primer3 (= 2.4.0-2) Section: debug Priority: optional Description: debug symbols for primer3 Build-Ids: 7af56ec9600523f124ed9d59a59c7523edcc740f cc1c71ce8ef1d0c8b14b5b9281bac8e102bdd4b8 dab0b0f47cad3ca3db9f41b1f9988f270cfd2f8d e7e0111d7b3fde062b1acb3a7240fdf61583e8c3 drwxr-xr-x root/root 0 2018-05-28 13:44 ./ drwxr-xr-x root/root 0 2018-05-28 13:44 ./usr/ drwxr-xr-x root/root 0 2018-05-28 13:44 ./usr/lib/ drwxr-xr-x root/root 0 2018-05-28 13:44 ./usr/lib/debug/ drwxr-xr-x root/root 0 2018-05-28 13:44 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2018-05-28 13:44 ./usr/lib/debug/.build-id/7a/ -rw-r--r-- root/root 17744 2018-05-28 13:44 ./usr/lib/debug/.build-id/7a/f56ec9600523f124ed9d59a59c7523edcc740f.debug drwxr-xr-x root/root 0 2018-05-28 13:44 ./usr/lib/debug/.build-id/cc/ -rw-r--r-- root/root 347384 2018-05-28 13:44 ./usr/lib/debug/.build-id/cc/1c71ce8ef1d0c8b14b5b9281bac8e102bdd4b8.debug drwxr-xr-x root/root 0 2018-05-28 13:44 ./usr/lib/debug/.build-id/da/ -rw-r--r-- root/root 72312 2018-05-28 13:44 ./usr/lib/debug/.build-id/da/b0b0f47cad3ca3db9f41b1f9988f270cfd2f8d.debug drwxr-xr-x root/root 0 2018-05-28 13:44 ./usr/lib/debug/.build-id/e7/ -rw-r--r-- root/root 26076 2018-05-28 13:44 ./usr/lib/debug/.build-id/e7/e0111d7b3fde062b1acb3a7240fdf61583e8c3.debug drwxr-xr-x root/root 0 2018-05-28 13:44 ./usr/share/ drwxr-xr-x root/root 0 2018-05-28 13:44 ./usr/share/doc/ lrwxrwxrwx root/root 0 2018-05-28 13:44 ./usr/share/doc/primer3-dbgsym -> primer3 primer3_2.4.0-2_armhf.deb ------------------------- new Debian package, version 2.0. size 165000 bytes: control archive=1432 bytes. 1387 bytes, 34 lines conffiles 857 bytes, 18 lines control 973 bytes, 15 lines md5sums Package: primer3 Version: 2.4.0-2 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 567 Depends: libc6 (>= 2.4), libgcc1 (>= 1:3.5), libstdc++6 (>= 5) Suggests: ncbi-epcr Enhances: emboss Section: science Priority: optional Homepage: http://primer3.sourceforge.net Description: tool to design flanking oligo nucleotides for DNA amplification Primer3 picks primers for Polymerase Chain Reactions (PCRs), considering as criteria oligonucleotide melting temperature, size, GC content and primer-dimer possibilities, PCR product size, positional constraints within the source sequence, and miscellaneous other constraints. All of these criteria are user-specifiable as constraints, and some are specifiable as terms in an objective function that characterizes an optimal primer pair. drwxr-xr-x root/root 0 2018-05-28 13:44 ./ drwxr-xr-x root/root 0 2018-05-28 13:44 ./etc/ drwxr-xr-x root/root 0 2017-11-03 16:29 ./etc/primer3_config/ -rw-r--r-- root/root 373 2017-11-03 16:29 ./etc/primer3_config/dangle.dh -rw-r--r-- root/root 548 2017-11-03 16:29 ./etc/primer3_config/dangle.ds drwxr-xr-x root/root 0 2017-11-03 16:29 ./etc/primer3_config/interpretations/ -rw-r--r-- root/root 994 2017-11-03 16:29 ./etc/primer3_config/interpretations/dangle_i.dh -rw-r--r-- root/root 1017 2017-11-03 16:29 ./etc/primer3_config/interpretations/dangle_i.ds -rw-r--r-- root/root 1856 2017-11-03 16:29 ./etc/primer3_config/interpretations/loops_i.dh -rw-r--r-- root/root 699 2017-11-03 16:29 ./etc/primer3_config/interpretations/loops_i.ds -rw-r--r-- root/root 2667 2017-11-03 16:29 ./etc/primer3_config/interpretations/stack_i.dh -rw-r--r-- root/root 2592 2017-11-03 16:29 ./etc/primer3_config/interpretations/stack_i.ds -rw-r--r-- root/root 2751 2017-11-03 16:29 ./etc/primer3_config/interpretations/stackmm_i_mm.dh -rw-r--r-- root/root 2643 2017-11-03 16:29 ./etc/primer3_config/interpretations/stackmm_i_mm.ds -rw-r--r-- root/root 815 2017-11-03 16:29 ./etc/primer3_config/interpretations/tetraloop_i.dh -rw-r--r-- root/root 873 2017-11-03 16:29 ./etc/primer3_config/interpretations/tetraloop_i.ds -rw-r--r-- root/root 194 2017-11-03 16:29 ./etc/primer3_config/interpretations/triloop_i.dh -rw-r--r-- root/root 160 2017-11-03 16:29 ./etc/primer3_config/interpretations/triloop_i.ds -rw-r--r-- root/root 2486 2017-11-03 16:29 ./etc/primer3_config/interpretations/tstack2_i.dh -rw-r--r-- root/root 2720 2017-11-03 16:29 ./etc/primer3_config/interpretations/tstack2_i.ds -rw-r--r-- root/root 2135 2017-11-03 16:29 ./etc/primer3_config/interpretations/tstack_i.dh -rw-r--r-- root/root 2463 2017-11-03 16:29 ./etc/primer3_config/interpretations/tstack_i.ds -rw-r--r-- root/root 2135 2017-11-03 16:29 ./etc/primer3_config/interpretations/tstack_tm_inf_i.dh -rw-r--r-- root/root 2494 2017-11-03 16:29 ./etc/primer3_config/interpretations/tstack_tm_inf_i.ds -rw-r--r-- root/root 441 2017-11-03 16:29 ./etc/primer3_config/loops.dh -rw-r--r-- root/root 692 2017-11-03 16:29 ./etc/primer3_config/loops.ds -rw-r--r-- root/root 1057 2017-11-03 16:29 ./etc/primer3_config/stack.dh -rw-r--r-- root/root 1056 2017-11-03 16:29 ./etc/primer3_config/stack.ds -rw-r--r-- root/root 1144 2017-11-03 16:29 ./etc/primer3_config/stackmm.dh -rw-r--r-- root/root 1109 2017-11-03 16:29 ./etc/primer3_config/stackmm.ds -rw-r--r-- root/root 913 2017-11-03 16:29 ./etc/primer3_config/tetraloop.dh -rw-r--r-- root/root 824 2017-11-03 16:29 ./etc/primer3_config/tetraloop.ds -rw-r--r-- root/root 192 2017-11-03 16:29 ./etc/primer3_config/triloop.dh -rw-r--r-- root/root 128 2017-11-03 16:29 ./etc/primer3_config/triloop.ds -rw-r--r-- root/root 890 2017-11-03 16:29 ./etc/primer3_config/tstack.dh -rw-r--r-- root/root 950 2017-11-03 16:29 ./etc/primer3_config/tstack2.dh -rw-r--r-- root/root 1184 2017-11-03 16:29 ./etc/primer3_config/tstack2.ds -rw-r--r-- root/root 1152 2017-11-03 16:29 ./etc/primer3_config/tstack_tm_inf.ds drwxr-xr-x root/root 0 2018-05-28 13:44 ./usr/ drwxr-xr-x root/root 0 2018-05-28 13:44 ./usr/bin/ -rwxr-xr-x root/root 17880 2018-05-28 13:44 ./usr/bin/ntdpal -rwxr-xr-x root/root 50648 2018-05-28 13:44 ./usr/bin/ntthal -rwxr-xr-x root/root 13784 2018-05-28 13:44 ./usr/bin/oligotm -rwxr-xr-x root/root 185828 2018-05-28 13:44 ./usr/bin/primer3_core drwxr-xr-x root/root 0 2018-05-28 13:44 ./usr/share/ drwxr-xr-x root/root 0 2018-05-28 13:44 ./usr/share/doc-base/ -rw-r--r-- root/root 660 2018-05-28 13:44 ./usr/share/doc-base/primer3-manual drwxr-xr-x root/root 0 2018-05-28 13:44 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-05-28 13:44 ./usr/share/doc/primer3/ -rw-r--r-- root/root 306 2018-05-28 13:44 ./usr/share/doc/primer3/README.test -rw-r--r-- root/root 3130 2018-05-28 13:44 ./usr/share/doc/primer3/changelog.Debian.gz -rw-r--r-- root/root 2516 2018-05-28 13:44 ./usr/share/doc/primer3/copyright drwxr-xr-x root/root 0 2018-05-28 13:44 ./usr/share/doc/primer3/examples/ -rw-r--r-- root/root 368 2017-11-03 16:29 ./usr/share/doc/primer3/examples/example -rw-r--r-- root/root 203514 2018-05-28 13:44 ./usr/share/doc/primer3/primer3_manual.htm -rw-r--r-- root/root 10180 2018-05-28 13:44 ./usr/share/doc/primer3/release_notes.txt.gz drwxr-xr-x root/root 0 2018-05-28 13:44 ./usr/share/man/ drwxr-xr-x root/root 0 2018-05-28 13:44 ./usr/share/man/man1/ -rw-r--r-- root/root 1858 2018-05-28 13:44 ./usr/share/man/man1/ntdpal.1.gz -rw-r--r-- root/root 824 2018-05-28 13:44 ./usr/share/man/man1/ntthal.1.gz -rw-r--r-- root/root 1710 2018-05-28 13:44 ./usr/share/man/man1/oligotm.1.gz -rw-r--r-- root/root 1674 2018-05-28 13:44 ./usr/share/man/man1/primer3_core.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 273904 Build-Time: 26 Distribution: unstable Foreign Architectures: armhf Host Architecture: armhf Install-Time: 21 Job: primer3_2.4.0-2 Lintian: pass Machine Architecture: amd64 Package: primer3 Package-Time: 59 Source-Version: 2.4.0-2 Space: 273904 Status: successful Version: 2.4.0-2 -------------------------------------------------------------------------------- Finished at 2019-03-06T18:53:03Z Build needed 00:00:59, 273904k disk space