sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on gcc131.bak.milne.osuosl.org +==============================================================================+ | probabel 0.5.0+dfsg-3 (s390x) Sun, 01 Sep 2019 02:43:38 +0000 | +==============================================================================+ Package: probabel Version: 0.5.0+dfsg-3 Source Version: 0.5.0+dfsg-3 Distribution: unstable Machine Architecture: amd64 Host Architecture: s390x Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-87258f60-3a24-4bdd-8730-d58a29d36ce3' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [139 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-08-31-0812.28.pdiff [12.7 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-08-31-1411.42.pdiff [14.6 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2019-08-31-2029.42.pdiff [21.6 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-08-31-0812.28.pdiff [40.7 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-08-31-1411.42.pdiff [11.3 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-08-31-2029.42.pdiff [42.0 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2019-08-31-2029.42.pdiff [21.6 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-08-31-2029.42.pdiff [42.0 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main s390x Packages [7972 kB] Fetched 8309 kB in 2s (4306 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: libgcrypt20 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 558 kB of archives. After this operation, 3072 B disk space will be freed. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 libgcrypt20 amd64 1.8.5-2 [558 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 558 kB in 0s (32.8 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13053 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.8.5-2_amd64.deb ... Unpacking libgcrypt20:amd64 (1.8.5-2) over (1.8.4-5) ... Setting up libgcrypt20:amd64 (1.8.5-2) ... Processing triggers for libc-bin (2.28-10) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'probabel' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/probabel.git Please use: git clone https://salsa.debian.org/med-team/probabel.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1782 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main probabel 0.5.0+dfsg-3 (dsc) [2175 B] Get:2 http://debian.oregonstate.edu/debian unstable/main probabel 0.5.0+dfsg-3 (tar) [1774 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main probabel 0.5.0+dfsg-3 (diff) [5040 B] Fetched 1782 kB in 0s (38.0 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/probabel-8RzllJ/probabel-0.5.0+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/probabel-8RzllJ' with '<>' +------------------------------------------------------------------------------+ | Install crossbuild-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64 Filtered Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64 dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-5262SX/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-5262SX/apt_archive ./ InRelease Get:2 copy:/<>/resolver-5262SX/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-5262SX/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-5262SX/apt_archive ./ Sources [361 B] Get:5 copy:/<>/resolver-5262SX/apt_archive ./ Packages [449 B] Fetched 1767 B in 0s (89.5 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils-s390x-linux-gnu cpp-9-s390x-linux-gnu cpp-s390x-linux-gnu cross-config crossbuild-essential-s390x dpkg-cross file g++-9-s390x-linux-gnu g++-s390x-linux-gnu gcc-9-cross-base gcc-9-s390x-linux-gnu gcc-9-s390x-linux-gnu-base gcc-s390x-linux-gnu libasan5-s390x-cross libatomic1-s390x-cross libc6-dev-s390x-cross libc6-s390x-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-9-dev-s390x-cross libgcc1-s390x-cross libgomp1-s390x-cross libicu63 libio-string-perl libitm1-s390x-cross liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-9-dev-s390x-cross libstdc++6-s390x-cross libubsan1-s390x-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-s390x-cross sensible-utils ucf Suggested packages: binutils-doc gcc-9-locales cpp-doc binutils-multiarch g++-9-multilib-s390x-linux-gnu gcc-9-doc libstdc++6-9-dbg-s390x-cross gcc-9-multilib-s390x-linux-gnu libgcc1-dbg-s390x-cross libgomp1-dbg-s390x-cross libitm1-dbg-s390x-cross libatomic1-dbg-s390x-cross libasan5-dbg-s390x-cross liblsan0-dbg-s390x-cross libtsan0-dbg-s390x-cross libubsan1-dbg-s390x-cross libquadmath0-dbg-s390x-cross manpages-dev autoconf automake libtool flex bison gdb-s390x-linux-gnu gcc-doc libyaml-shell-perl Recommended packages: libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl The following NEW packages will be installed: binutils-s390x-linux-gnu cpp-9-s390x-linux-gnu cpp-s390x-linux-gnu cross-config crossbuild-essential-s390x dpkg-cross file g++-9-s390x-linux-gnu g++-s390x-linux-gnu gcc-9-cross-base gcc-9-s390x-linux-gnu gcc-9-s390x-linux-gnu-base gcc-s390x-linux-gnu libasan5-s390x-cross libatomic1-s390x-cross libc6-dev-s390x-cross libc6-s390x-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-9-dev-s390x-cross libgcc1-s390x-cross libgomp1-s390x-cross libicu63 libio-string-perl libitm1-s390x-cross liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-9-dev-s390x-cross libstdc++6-s390x-cross libubsan1-s390x-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-s390x-cross sbuild-build-depends-core-dummy:s390x sensible-utils ucf 0 upgraded, 45 newly installed, 0 to remove and 0 not upgraded. Need to get 40.3 MB of archives. After this operation, 149 MB of additional disk space will be used. Get:1 copy:/<>/resolver-5262SX/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [872 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.37-5 [253 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.37-5 [119 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.37-5 [67.1 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-s390x-linux-gnu amd64 2.32.51.20190821-2 [1914 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-s390x-linux-gnu-base amd64 9.2.1-4cross1 [192 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-s390x-linux-gnu amd64 9.2.1-4cross1 [6136 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-s390x-linux-gnu amd64 4:9.2.1-3 [16.6 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base all 9.2.1-4cross1 [188 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-s390x-cross all 2.28-10cross6 [1310 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-s390x-cross all 1:9.2.1-4cross1 [24.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-s390x-cross all 9.2.1-4cross1 [79.4 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-s390x-cross all 9.2.1-4cross1 [26.4 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-s390x-cross all 9.2.1-4cross1 [8008 B] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-s390x-cross all 9.2.1-4cross1 [337 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-s390x-cross all 9.2.1-4cross1 [449 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-s390x-cross all 9.2.1-4cross1 [119 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-s390x-cross all 9.2.1-4cross1 [682 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-s390x-linux-gnu amd64 9.2.1-4cross1 [6492 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-s390x-linux-gnu amd64 4:9.2.1-3 [1452 B] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-s390x-cross all 5.2.9-2cross6 [1327 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-s390x-cross all 2.28-10cross6 [2255 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-s390x-cross all 9.2.1-4cross1 [1644 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-s390x-linux-gnu amd64 9.2.1-4cross1 [6712 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 g++-s390x-linux-gnu amd64 4:9.2.1-3 [1176 B] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-2 [8301 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1 [344 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.29-1 [67.4 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-s390x all 12.7 [6600 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 40.3 MB in 1s (58.3 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 13053 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-3+b4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-3+b4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.37-5_amd64.deb ... Unpacking libmagic-mgc (1:5.37-5) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.37-5_amd64.deb ... Unpacking libmagic1:amd64 (1:5.37-5) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.37-5_amd64.deb ... Unpacking file (1:5.37-5) ... Selecting previously unselected package ucf. Preparing to unpack .../05-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... 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Preparing to unpack .../37-libyaml-perl_1.29-1_all.deb ... Unpacking libyaml-perl (1.29-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../38-libconfig-auto-perl_0.44-1_all.deb ... Unpacking libconfig-auto-perl (0.44-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../39-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../40-libfile-homedir-perl_1.004-1_all.deb ... Unpacking libfile-homedir-perl (1.004-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../41-libdebian-dpkgcross-perl_2.6.15-3_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-3) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../42-dpkg-cross_2.6.15-3_all.deb ... Unpacking dpkg-cross (2.6.15-3) ... Selecting previously unselected package crossbuild-essential-s390x. Preparing to unpack .../43-crossbuild-essential-s390x_12.7_all.deb ... Unpacking crossbuild-essential-s390x (12.7) ... Selecting previously unselected package sbuild-build-depends-core-dummy:s390x. Preparing to unpack .../44-sbuild-build-depends-core-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-core-dummy:s390x (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libfile-which-perl (1.23-1) ... Setting up binutils-s390x-linux-gnu (2.32.51.20190821-2) ... Setting up libmagic-mgc (1:5.37-5) ... Setting up libc6-s390x-cross (2.28-10cross6) ... Setting up gcc-9-s390x-linux-gnu-base:amd64 (9.2.1-4cross1) ... Setting up libmagic1:amd64 (1:5.37-5) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up file (1:5.37-5) ... Setting up libyaml-perl (1.29-1) ... Setting up libicu63:amd64 (63.2-2) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up linux-libc-dev-s390x-cross (5.2.9-2cross6) ... Setting up cross-config (2.6.15-3) ... Setting up cpp-9-s390x-linux-gnu (9.2.1-4cross1) ... Setting up gcc-9-cross-base (9.2.1-4cross1) ... Setting up libitm1-s390x-cross (9.2.1-4cross1) ... Setting up sensible-utils (0.0.12) ... Setting up libc6-dev-s390x-cross (2.28-10cross6) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libgomp1-s390x-cross (9.2.1-4cross1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up libgcc1-s390x-cross (1:9.2.1-4cross1) ... Setting up cpp-s390x-linux-gnu (4:9.2.1-3) ... Setting up libstdc++6-s390x-cross (9.2.1-4cross1) ... Setting up libatomic1-s390x-cross (9.2.1-4cross1) ... Setting up libasan5-s390x-cross (9.2.1-4cross1) ... Setting up ucf (3.0038+nmu1) ... Setting up libubsan1-s390x-cross (9.2.1-4cross1) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-9-dev-s390x-cross (9.2.1-4cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libstdc++-9-dev-s390x-cross (9.2.1-4cross1) ... Setting up gcc-9-s390x-linux-gnu (9.2.1-4cross1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up gcc-s390x-linux-gnu (4:9.2.1-3) ... Setting up g++-9-s390x-linux-gnu (9.2.1-4cross1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up g++-s390x-linux-gnu (4:9.2.1-3) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-s390x (12.7) ... Setting up sbuild-build-depends-core-dummy:s390x (0.invalid.0) ... Processing triggers for libc-bin (2.28-10) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (s390x included in any all) Setup apt archive ----------------- dpkg-deb: building package 'sbuild-build-depends-essential-dummy' in '/<>/resolver-5262SX/apt_archive/sbuild-build-depends-essential-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-5262SX/apt_archive ./ InRelease Get:2 copy:/<>/resolver-5262SX/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-5262SX/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-5262SX/apt_archive ./ Sources [483 B] Get:5 copy:/<>/resolver-5262SX/apt_archive ./ Packages [568 B] Fetched 2014 B in 0s (106 kB/s) Reading package lists... Reading package lists... Install essential build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-essential-dummy:s390x 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 840 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-5262SX/apt_archive ./ sbuild-build-depends-essential-dummy 0.invalid.0 [840 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 840 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-essential-dummy:s390x. (Reading database ... 16224 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-essential-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-essential-dummy:s390x (0.invalid.0) ... Setting up sbuild-build-depends-essential-dummy:s390x (0.invalid.0) ... +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 12~), libeigen3-dev, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-recommended Filtered Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 12~), libeigen3-dev, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-recommended dpkg-deb: building package 'sbuild-build-depends-probabel-dummy' in '/<>/resolver-5262SX/apt_archive/sbuild-build-depends-probabel-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-probabel-dummy dpkg-scanpackages: info: Wrote 3 entries to output Packages file. Ign:1 copy:/<>/resolver-5262SX/apt_archive ./ InRelease Get:2 copy:/<>/resolver-5262SX/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-5262SX/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-5262SX/apt_archive ./ Sources [673 B] Get:5 copy:/<>/resolver-5262SX/apt_archive ./ Packages [758 B] Fetched 2394 B in 0s (119 kB/s) Reading package lists... Reading package lists... Install probabel build dependencies (apt-based resolver) -------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz fontconfig-config fonts-dejavu-core fonts-lmodern fonts-urw-base35 gcc-9-base:s390x gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:s390x libatomic1:s390x libavahi-client3 libavahi-common-data libavahi-common3 libbrotli1 libbsd0 libc6:s390x libc6-dev:s390x libcairo2 libcroco3 libcups2 libcupsimage2 libdbus-1-3 libeigen3-dev libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgcc-9-dev:s390x libgcc1:s390x libglib2.0-0 libgomp1:s390x libgraphite2-3 libgs9 libgs9-common libgssapi-krb5-2 libharfbuzz-icu0 libharfbuzz0b libice6 libidn11 libijs-0.35 libitm1:s390x libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5support0 liblcms2-2 libmpdec2 libncurses6 libopenjp2-7 libpaper-utils libpaper1 libpipeline1 libpixman-1-0 libpng16-16 libpotrace0 libptexenc1 libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libreadline8 libsigsegv2 libsm6 libsqlite3-0 libssl1.1 libstdc++-9-dev:s390x libstdc++6:s390x libsub-override-perl libsynctex2 libteckit0 libtexlua53 libtexluajit2 libtiff5 libtool libubsan1:s390x libuchardet0 libwebp6 libwoff1 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxmu6 libxpm4 libxrender1 libxt6 libxxhash0 libzzip-0-13 linux-libc-dev:s390x m4 man-db mime-support pkg-config po-debconf poppler-data preview-latex-style python python-minimal python2 python2-minimal python2.7 python2.7-minimal python3 python3-minimal python3.7 python3.7-minimal readline-common t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures x11-common xdg-utils Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:s390x libc-l10n:s390x locales:s390x manpages-dev:s390x cups-common libeigen3-doc libmpfrc++-dev krb5-doc krb5-user liblcms2-utils libstdc++-9-doc:s390x libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl poppler-utils ghostscript fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum python-doc python-tk python2-doc python2.7-doc binfmt-support python3-doc python3-tk python3-venv python3.7-venv python3.7-doc readline-doc gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec texlive-fonts-recommended-doc texlive-latex-base-doc python-pygments icc-profiles libspreadsheet-parseexcel-perl texlive-latex-extra-doc texlive-latex-recommended-doc texlive-luatex texlive-pstricks dot2tex prerex ruby-tcltk | libtcltk-ruby texlive-pictures-doc vprerex Recommended packages: curl | wget | lynx libidn2-0:s390x libcupsfilters1 dbus libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs fonts-droid-fallback krb5-locales libgpm2 libltdl-dev libmail-sendmail-perl lmodern tex-gyre tipa texlive-plain-generic ruby | ruby-interpreter tk libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz fontconfig-config fonts-dejavu-core fonts-lmodern fonts-urw-base35 gcc-9-base:s390x gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:s390x libatomic1:s390x libavahi-client3 libavahi-common-data libavahi-common3 libbrotli1 libbsd0 libc6:s390x libc6-dev:s390x libcairo2 libcroco3 libcups2 libcupsimage2 libdbus-1-3 libeigen3-dev libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgcc-9-dev:s390x libgcc1:s390x libglib2.0-0 libgomp1:s390x libgraphite2-3 libgs9 libgs9-common libgssapi-krb5-2 libharfbuzz-icu0 libharfbuzz0b libice6 libidn11 libijs-0.35 libitm1:s390x libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5support0 liblcms2-2 libmpdec2 libncurses6 libopenjp2-7 libpaper-utils libpaper1 libpipeline1 libpixman-1-0 libpng16-16 libpotrace0 libptexenc1 libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libreadline8 libsigsegv2 libsm6 libsqlite3-0 libssl1.1 libstdc++-9-dev:s390x libstdc++6:s390x libsub-override-perl libsynctex2 libteckit0 libtexlua53 libtexluajit2 libtiff5 libtool libubsan1:s390x libuchardet0 libwebp6 libwoff1 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxmu6 libxpm4 libxrender1 libxt6 libxxhash0 libzzip-0-13 linux-libc-dev:s390x m4 man-db mime-support pkg-config po-debconf poppler-data preview-latex-style python python-minimal python2 python2-minimal python2.7 python2.7-minimal python3 python3-minimal python3.7 python3.7-minimal readline-common sbuild-build-depends-probabel-dummy:s390x t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures x11-common xdg-utils 0 upgraded, 143 newly installed, 0 to remove and 0 not upgraded. Need to get 133 MB of archives. After this operation, 486 MB of additional disk space will be used. Get:1 copy:/<>/resolver-5262SX/apt_archive ./ sbuild-build-depends-probabel-dummy 0.invalid.0 [916 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.7-3 [1300 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libpython2.7-minimal amd64 2.7.16-3 [395 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 python2.7-minimal amd64 2.7.16-3 [1364 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 python2-minimal amd64 2.7.16-1 [41.4 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 python-minimal amd64 2.7.16-1 [21.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1c-1 [1535 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 mime-support all 3.63 [37.7 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.2.7-1 [106 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-3 [72.5 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-3 [160 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.29.0-2 [646 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libpython2.7-stdlib amd64 2.7.16-3 [1910 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 python2.7 amd64 2.7.16-3 [305 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libpython2-stdlib amd64 2.7.16-1 [20.8 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libpython-stdlib amd64 2.7.16-1 [20.8 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 python2 amd64 2.7.16-1 [41.6 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 python amd64 2.7.16-1 [22.8 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 poppler-data all 0.4.9-2 [1473 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.7-minimal amd64 3.7.4-3 [590 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 python3.7-minimal amd64 3.7.4-3 [1811 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 python3-minimal amd64 3.7.3-1 [36.6 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libmpdec2 amd64 2.4.2-2 [87.2 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.7-stdlib amd64 3.7.4-3 [1729 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 python3.7 amd64 3.7.4-3 [340 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3-stdlib amd64 3.7.3-1 [20.0 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 python3 amd64 3.7.3-1 [61.5 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 tex-common all 6.12 [53.1 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main s390x gcc-9-base s390x 9.2.1-6 [192 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-11 [547 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.5.0-1 [22.8 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.5.0-1 [14.1 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-1 [81.8 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.60.6-2 [1295 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20190803-1 [102 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.5.3 [1036 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 fonts-dejavu-core all 2.37-1 [1068 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 fontconfig-config all 2.13.1-2 [280 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 fonts-lmodern all 2.004.5-6 [4539 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 fonts-urw-base35 all 20170801.1-2 [4830 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main s390x libgcc1 s390x 1:9.2.1-6 [24.3 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main s390x libc6 s390x 2.28-10 [2505 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main s390x libasan5 s390x 9.2.1-6 [344 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main s390x libatomic1 s390x 9.2.1-6 [8100 B] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libavahi-common-data amd64 0.7-4+b1 [122 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libavahi-common3 amd64 0.7-4+b1 [54.6 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libdbus-1-3 amd64 1.12.16-1 [214 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libavahi-client3 amd64 0.7-4+b1 [58.1 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libbrotli1 amd64 1.0.7-2 [270 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main s390x linux-libc-dev s390x 5.2.9-2 [1232 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main s390x libc6-dev s390x 2.28-10 [2270 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libpng16-16 amd64 1.6.37-1 [292 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libfreetype6 amd64 2.9.1-4 [379 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libfontconfig1 amd64 2.13.1-2+b1 [347 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libpixman-1-0 amd64 0.36.0-1 [537 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libxau6 amd64 1:1.0.8-1+b2 [19.9 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libxcb1 amd64 1.13.1-2 [137 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libx11-data all 2:1.6.7-1 [298 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libx11-6 amd64 2:1.6.7-1 [754 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libxcb-render0 amd64 1.13.1-2 [109 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libxcb-shm0 amd64 1.13.1-2 [99.2 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libxext6 amd64 2:1.3.3-1+b2 [52.5 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libcairo2 amd64 1.16.0-4 [689 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libkeyutils1 amd64 1.6-6 [15.0 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5support0 amd64 1.17-6 [64.6 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libk5crypto3 amd64 1.17-6 [116 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5-3 amd64 1.17-6 [366 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.17-6 [156 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libcups2 amd64 2.2.12-2 [327 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libcupsimage2 amd64 2.2.12-2 [134 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 pkg-config amd64 0.29-6 [63.5 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 libeigen3-dev all 3.3.7-1 [850 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main s390x libgomp1 s390x 9.2.1-6 [81.1 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main s390x libitm1 s390x 9.2.1-6 [26.7 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main s390x libstdc++6 s390x 9.2.1-6 [491 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main s390x libubsan1 s390x 9.2.1-6 [120 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main s390x libgcc-9-dev s390x 9.2.1-6 [682 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 libgraphite2-3 amd64 1.3.13-8 [80.6 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 libgs9-common all 9.28~~rc1~dfsg-1 [725 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main amd64 libidn11 amd64 1.33-2.2 [116 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main amd64 libijs-0.35 amd64 0.35-15 [16.4 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main amd64 libjpeg62-turbo amd64 1:1.5.2-2+b1 [134 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main amd64 liblcms2-2 amd64 2.9-3+b1 [146 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main amd64 libopenjp2-7 amd64 2.3.0-2 [158 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main amd64 libpaper1 amd64 1.1.28+b1 [21.6 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main amd64 libwebp6 amd64 0.6.1-2+b1 [261 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main amd64 libtiff5 amd64 4.0.10+git190818-1 [262 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main amd64 libgs9 amd64 9.28~~rc1~dfsg-1 [2219 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main amd64 libharfbuzz0b amd64 2.6.1-2 [1316 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main amd64 libharfbuzz-icu0 amd64 2.6.1-2 [952 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main amd64 x11-common all 1:7.7+19 [251 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main amd64 libice6 amd64 2:1.0.9-2 [58.7 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main amd64 libkpathsea6 amd64 2019.20190605.51237-2 [168 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main amd64 libpaper-utils amd64 1.1.28+b1 [18.3 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main amd64 libpotrace0 amd64 1.15-1+b1 [26.3 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main amd64 libptexenc1 amd64 2019.20190605.51237-2 [61.7 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main s390x libstdc++-9-dev s390x 9.2.1-6 [1655 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main amd64 libsynctex2 amd64 2019.20190605.51237-2 [81.2 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main amd64 libteckit0 amd64 2.5.8+ds2-5 [318 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main amd64 libtexlua53 amd64 2019.20190605.51237-2 [127 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main amd64 libtexluajit2 amd64 2019.20190605.51237-2 [257 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main amd64 libwoff1 amd64 1.0.2-1+b1 [42.4 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main amd64 libxt6 amd64 1:1.1.5-1+b3 [190 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main amd64 libxmu6 amd64 2:1.1.2-2+b3 [60.8 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main amd64 libxpm4 amd64 1:3.5.12-1 [49.1 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main amd64 libxaw7 amd64 2:1.0.13-1+b2 [201 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main amd64 libxi6 amd64 2:1.7.9-1 [82.6 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main amd64 libxxhash0 amd64 0.7.0-2 [9288 B] Get:133 http://debian.oregonstate.edu/debian unstable/main amd64 libzzip-0-13 amd64 0.13.62-3.2 [55.4 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main amd64 preview-latex-style all 11.91-2 [201 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main amd64 texlive-binaries amd64 2019.20190605.51237-2 [8779 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main amd64 xdg-utils all 1.1.3-1 [73.3 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main amd64 texlive-base all 2019.20190830-1 [20.6 MB] Get:139 http://debian.oregonstate.edu/debian unstable/main amd64 texlive-fonts-recommended all 2019.20190830-1 [5230 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main amd64 texlive-latex-base all 2019.20190830-1 [989 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main amd64 texlive-latex-recommended all 2019.20190830-1 [15.4 MB] Get:142 http://debian.oregonstate.edu/debian unstable/main amd64 texlive-pictures all 2019.20190830-1 [10.9 MB] Get:143 http://debian.oregonstate.edu/debian unstable/main amd64 texlive-latex-extra all 2019.20190830-1 [12.5 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 133 MB in 2s (70.2 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 16224 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.7-3_amd64.deb ... Unpacking man-db (2.8.7-3) ... 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Preparing to unpack .../020-libncurses6_6.1+20190803-1_amd64.deb ... Unpacking libncurses6:amd64 (6.1+20190803-1) ... Selecting previously unselected package gettext. Preparing to unpack .../021-gettext_0.19.8.1-9_amd64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../022-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../023-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../024-debhelper_12.5.3_all.deb ... Unpacking debhelper (12.5.3) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../025-fonts-dejavu-core_2.37-1_all.deb ... Unpacking fonts-dejavu-core (2.37-1) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../026-fontconfig-config_2.13.1-2_all.deb ... Unpacking fontconfig-config (2.13.1-2) ... Selecting previously unselected package fonts-lmodern. Preparing to unpack .../027-fonts-lmodern_2.004.5-6_all.deb ... Unpacking fonts-lmodern (2.004.5-6) ... Selecting previously unselected package fonts-urw-base35. Preparing to unpack .../028-fonts-urw-base35_20170801.1-2_all.deb ... Unpacking fonts-urw-base35 (20170801.1-2) ... Selecting previously unselected package libgcc1:s390x. Preparing to unpack .../029-libgcc1_1%3a9.2.1-6_s390x.deb ... Unpacking libgcc1:s390x (1:9.2.1-6) ... Selecting previously unselected package libc6:s390x. Preparing to unpack .../030-libc6_2.28-10_s390x.deb ... Unpacking libc6:s390x (2.28-10) ... Selecting previously unselected package libasan5:s390x. Preparing to unpack .../031-libasan5_9.2.1-6_s390x.deb ... Unpacking libasan5:s390x (9.2.1-6) ... Selecting previously unselected package libatomic1:s390x. 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Setting up x11-common (1:7.7+19) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Setting up linux-libc-dev:s390x (5.2.9-2) ... Setting up gettext-base (0.19.8.1-9) ... Setting up libzzip-0-13:amd64 (0.13.62-3.2) ... Setting up libpaper-utils (1.1.28+b1) ... Setting up fonts-urw-base35 (20170801.1-2) ... Setting up libjbig0:amd64 (2.1-3.1+b2) ... Setting up poppler-data (0.4.9-2) ... Setting up libkrb5support0:amd64 (1.17-6) ... Setting up tex-common (6.12) ... update-language: texlive-base not installed and configured, doing nothing! Setting up autotools-dev (20180224.1) ... Setting up libjpeg62-turbo:amd64 (1:1.5.2-2+b1) ... Setting up libx11-data (2:1.6.7-1) ... Setting up libidn11:amd64 (1.33-2.2) ... Setting up libteckit0:amd64 (2.5.8+ds2-5) ... Setting up libavahi-common-data:amd64 (0.7-4+b1) ... Setting up libncurses6:amd64 (6.1+20190803-1) ... Setting up libdbus-1-3:amd64 (1.12.16-1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up t1utils (1.41-3) ... Setting up libpng16-16:amd64 (1.6.37-1) ... Setting up autopoint (0.19.8.1-9) ... Setting up libwebp6:amd64 (0.6.1-2+b1) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up pkg-config (0.29-6) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up libk5crypto3:amd64 (1.17-6) ... Setting up libkpathsea6:amd64 (2019.20190605.51237-2) ... Setting up libxxhash0:amd64 (0.7.0-2) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up fonts-lmodern (2.004.5-6) ... Setting up libopenjp2-7:amd64 (2.3.0-2) ... Setting up libsub-override-perl (0.09-2) ... Setting up libkrb5-3:amd64 (1.17-6) ... Setting up libtiff5:amd64 (4.0.10+git190818-1) ... Setting up libmpdec2:amd64 (2.4.2-2) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up readline-common (8.0-3) ... Setting up xdg-utils (1.1.3-1) ... Setting up libsynctex2:amd64 (2019.20190605.51237-2) ... Setting up gcc-9-base:s390x (9.2.1-6) ... Setting up libpotrace0:amd64 (1.15-1+b1) ... Setting up libgs9-common (9.28~~rc1~dfsg-1) ... Setting up libfile-stripnondeterminism-perl (1.5.0-1) ... Setting up libice6:amd64 (2:1.0.9-2) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libxcb1:amd64 (1.13.1-2) ... Setting up gettext (0.19.8.1-9) ... Setting up libwoff1:amd64 (1.0.2-1+b1) ... Setting up libtool (2.4.6-11) ... Setting up libxcb-render0:amd64 (1.13.1-2) ... Setting up fontconfig-config (2.13.1-2) ... Setting up preview-latex-style (11.91-2) ... Setting up libreadline8:amd64 (8.0-3) ... Setting up libavahi-common3:amd64 (0.7-4+b1) ... Setting up m4 (1.4.18-2) ... Setting up libxcb-shm0:amd64 (1.13.1-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libpython2.7-stdlib:amd64 (2.7.16-3) ... Setting up libptexenc1:amd64 (2019.20190605.51237-2) ... Setting up libfreetype6:amd64 (2.9.1-4) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libeigen3-dev (3.3.7-1) ... Setting up libgssapi-krb5-2:amd64 (1.17-6) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.13-1) ... Setting up groff-base (1.22.4-3) ... Setting up libx11-6:amd64 (2:1.6.7-1) ... Setting up libharfbuzz0b:amd64 (2.6.1-2) ... Setting up libfontconfig1:amd64 (2.13.1-2+b1) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up libavahi-client3:amd64 (0.7-4+b1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libpython3.7-stdlib:amd64 (3.7.4-3) ... Setting up libharfbuzz-icu0:amd64 (2.6.1-2) ... Setting up libxpm4:amd64 (1:3.5.12-1) ... Setting up python2.7 (2.7.16-3) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libpython2-stdlib:amd64 (2.7.16-1) ... Setting up po-debconf (1.0.21) ... Setting up libxext6:amd64 (2:1.3.3-1+b2) ... Setting up man-db (2.8.7-3) ... Not building database; man-db/auto-update is not 'true'. Setting up python2 (2.7.16-1) ... Setting up libcairo2:amd64 (1.16.0-4) ... Setting up libpython-stdlib:amd64 (2.7.16-1) ... Setting up libxt6:amd64 (1:1.1.5-1+b3) ... Setting up libcups2:amd64 (2.2.12-2) ... Setting up python (2.7.16-1) ... Setting up libpython3-stdlib:amd64 (3.7.3-1) ... Setting up python3.7 (3.7.4-3) ... Setting up libxmu6:amd64 (2:1.1.2-2+b3) ... Setting up libxi6:amd64 (2:1.7.9-1) ... Setting up python3 (3.7.3-1) ... Setting up libxaw7:amd64 (2:1.0.13-1+b2) ... Setting up libcupsimage2:amd64 (2.2.12-2) ... Setting up libgs9:amd64 (9.28~~rc1~dfsg-1) ... Setting up texlive-binaries (2019.20190605.51237-2) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up texlive-base (2019.20190830-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex Setting up texlive-latex-base (2019.20190830-1) ... Setting up texlive-latex-recommended (2019.20190830-1) ... Setting up texlive-pictures (2019.20190830-1) ... Setting up texlive-fonts-recommended (2019.20190830-1) ... Setting up texlive-latex-extra (2019.20190830-1) ... Setting up libc6:s390x (2.28-10) ... Setting up libc6-dev:s390x (2.28-10) ... Setting up libitm1:s390x (9.2.1-6) ... Setting up libgcc1:s390x (1:9.2.1-6) ... Setting up debhelper (12.5.3) ... Setting up libgomp1:s390x (9.2.1-6) ... Setting up dh-autoreconf (19) ... Setting up libasan5:s390x (9.2.1-6) ... Setting up libatomic1:s390x (9.2.1-6) ... Setting up dh-strip-nondeterminism (1.5.0-1) ... Setting up libstdc++6:s390x (9.2.1-6) ... Setting up libubsan1:s390x (9.2.1-6) ... Setting up libgcc-9-dev:s390x (9.2.1-6) ... Setting up libstdc++-9-dev:s390x (9.2.1-6) ... Setting up sbuild-build-depends-probabel-dummy:s390x (0.invalid.0) ... Processing triggers for libc-bin (2.28-10) ... Processing triggers for tex-common (6.12) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.32.51.20190821-2 dpkg-dev_1.19.7 g++-8_8.3.0-21 g++-9_9.2.1-6 gcc-8_8.3.0-21 gcc-9_9.2.1-6 libc6-dev_2.28-10 libstdc++-8-dev_8.3.0-21 libstdc++-9-dev_9.2.1-6 libstdc++-9-dev-s390x-cross_9.2.1-4cross1 libstdc++6_9.2.1-6 libstdc++6-s390x-cross_9.2.1-4cross1 linux-libc-dev_5.2.9-2 Package versions: adduser_3.118 apt_1.8.3 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.46 bash_5.0-4 binutils_2.32.51.20190821-2 binutils-common_2.32.51.20190821-2 binutils-s390x-linux-gnu_2.32.51.20190821-2 binutils-x86-64-linux-gnu_2.32.51.20190821-2 bsdmainutils_11.1.2+b1 bsdutils_1:2.34-0.1 build-essential_12.7 bzip2_1.0.6-9.2 coreutils_8.30-3+b1 cpp_4:9.2.1-3 cpp-8_8.3.0-21 cpp-9_9.2.1-6 cpp-9-s390x-linux-gnu_9.2.1-4cross1 cpp-s390x-linux-gnu_4:9.2.1-3 cross-config_2.6.15-3 crossbuild-essential-s390x_12.7 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.5.3 debian-archive-keyring_2019.1 debianutils_4.8.6.3 dh-autoreconf_19 dh-strip-nondeterminism_1.5.0-1 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.13-1 e2fsprogs_1.45.3-4 fakeroot_1.23-1 fdisk_2.34-0.1 file_1:5.37-5 findutils_4.6.0+git+20190510-2 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 fonts-lmodern_2.004.5-6 fonts-urw-base35_20170801.1-2 g++_4:9.2.1-3 g++-8_8.3.0-21 g++-9_9.2.1-6 g++-9-s390x-linux-gnu_9.2.1-4cross1 g++-s390x-linux-gnu_4:9.2.1-3 gcc_4:9.2.1-3 gcc-8_8.3.0-21 gcc-8-base_8.3.0-21 gcc-9_9.2.1-6 gcc-9-base_9.2.1-6 gcc-9-cross-base_9.2.1-4cross1 gcc-9-s390x-linux-gnu_9.2.1-4cross1 gcc-9-s390x-linux-gnu-base_9.2.1-4cross1 gcc-s390x-linux-gnu_4:9.2.1-3 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.17-3 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3+b1 hostname_3.22+b1 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-4 libapt-pkg5.0_1.8.3 libarchive-zip-perl_1.64-1 libasan5_9.2.1-6 libasan5-s390x-cross_9.2.1-4cross1 libatomic1_9.2.1-6 libatomic1-s390x-cross_9.2.1-4cross1 libattr1_1:2.4.48-4 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2 libavahi-client3_0.7-4+b1 libavahi-common-data_0.7-4+b1 libavahi-common3_0.7-4+b1 libbinutils_2.32.51.20190821-2 libblkid1_2.34-0.1 libbrotli1_1.0.7-2 libbsd0_0.10.0-1 libbz2-1.0_1.0.6-9.2 libc-bin_2.28-10 libc-dev-bin_2.28-10 libc6_2.28-10 libc6-dev_2.28-10 libc6-dev-s390x-cross_2.28-10cross6 libc6-s390x-cross_2.28-10cross6 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2+b1 libcc1-0_9.2.1-6 libcom-err2_1.45.3-4 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.13-1 libcups2_2.2.12-2 libcupsimage2_2.2.12-2 libdb5.3_5.3.28+dfsg1-0.6 libdbus-1-3_1.12.16-1 libdebconfclient0_0.249 libdebian-dpkgcross-perl_2.6.15-3 libdpkg-perl_1.19.7 libeigen3-dev_3.3.7-1 libelf1_0.176-1.1 libexpat1_2.2.7-1 libext2fs2_1.45.3-4 libfakeroot_1.23-1 libfdisk1_2.34-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.5.0-1 libfile-which-perl_1.23-1 libfontconfig1_2.13.1-2+b1 libfreetype6_2.9.1-4 libgcc-8-dev_8.3.0-21 libgcc-9-dev_9.2.1-6 libgcc-9-dev-s390x-cross_9.2.1-4cross1 libgcc1_1:9.2.1-6 libgcc1-s390x-cross_1:9.2.1-4cross1 libgcrypt20_1.8.5-2 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.60.6-2 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.9-4 libgomp1_9.2.1-6 libgomp1-s390x-cross_9.2.1-4cross1 libgpg-error0_1.36-7 libgraphite2-3_1.3.13-8 libgs9_9.28~~rc1~dfsg-1 libgs9-common_9.28~~rc1~dfsg-1 libgssapi-krb5-2_1.17-6 libharfbuzz-icu0_2.6.1-2 libharfbuzz0b_2.6.1-2 libhogweed4_3.5.1+really3.4.1-1 libice6_2:1.0.9-2 libicu63_63.2-2 libidn11_1.33-2.2 libidn2-0_2.2.0-1 libijs-0.35_0.35-15 libio-string-perl_1.08-3 libisl19_0.20-2 libitm1_9.2.1-6 libitm1-s390x-cross_9.2.1-4cross1 libjbig0_2.1-3.1+b2 libjpeg62-turbo_1:1.5.2-2+b1 libk5crypto3_1.17-6 libkeyutils1_1.6-6 libkpathsea6_2019.20190605.51237-2 libkrb5-3_1.17-6 libkrb5support0_1.17-6 liblcms2-2_2.9-3+b1 liblocale-gettext-perl_1.07-3+b4 liblsan0_9.2.1-6 liblz4-1_1.8.3-1+b1 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.37-5 libmagic1_1:5.37-5 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.2-1 libmpx2_8.3.0-21 libncurses6_6.1+20190803-1 libncursesw6_6.1+20190803-1 libnettle6_3.5.1+really3.4.1-1 libopenjp2-7_2.3.0-2 libp11-kit0_0.23.16.1-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpaper-utils_1.1.28+b1 libpaper1_1.1.28+b1 libpcre2-8-0_10.32-5+b1 libpcre3_2:8.39-12+b1 libperl5.28_5.28.1-6 libpipeline1_1.5.1-2 libpixman-1-0_0.36.0-1 libpng16-16_1.6.37-1 libpotrace0_1.15-1+b1 libptexenc1_2019.20190605.51237-2 libpython-stdlib_2.7.16-1 libpython2-stdlib_2.7.16-1 libpython2.7-minimal_2.7.16-3 libpython2.7-stdlib_2.7.16-3 libpython3-stdlib_3.7.3-1 libpython3.7-minimal_3.7.4-3 libpython3.7-stdlib_3.7.4-3 libquadmath0_9.2.1-6 libreadline8_8.0-3 libseccomp2_2.4.1-2 libselinux1_2.9-2+b2 libsemanage-common_2.9-3 libsemanage1_2.9-3 libsepol1_2.9-2+b2 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.34-0.1 libsqlite3-0_3.29.0-2 libss2_1.45.3-4 libssl1.1_1.1.1c-1 libstdc++-8-dev_8.3.0-21 libstdc++-9-dev_9.2.1-6 libstdc++-9-dev-s390x-cross_9.2.1-4cross1 libstdc++6_9.2.1-6 libstdc++6-s390x-cross_9.2.1-4cross1 libsub-override-perl_0.09-2 libsynctex2_2019.20190605.51237-2 libsystemd0_242-5 libtasn1-6_4.14-2 libteckit0_2.5.8+ds2-5 libtexlua53_2019.20190605.51237-2 libtexluajit2_2019.20190605.51237-2 libtiff5_4.0.10+git190818-1 libtinfo6_6.1+20190803-1 libtool_2.4.6-11 libtsan0_9.2.1-6 libubsan1_9.2.1-6 libubsan1-s390x-cross_9.2.1-4cross1 libuchardet0_0.0.6-3 libudev1_242-5 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libwebp6_0.6.1-2+b1 libwoff1_1.0.2-1+b1 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1+b2 libxcb-render0_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb1_1.13.1-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxi6_2:1.7.9-1 libxml-libxml-perl_2.0134+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libxmu6_2:1.1.2-2+b3 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1+b3 libxxhash0_0.7.0-2 libyaml-perl_1.29-1 libzstd1_1.4.3+dfsg-1 libzzip-0-13_0.13.62-3.2 linux-libc-dev_5.2.9-2 linux-libc-dev-s390x-cross_5.2.9-2cross6 login_1:4.7-2 logsave_1.45.3-4 lsb-base_11.1.0 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.7-3 mawk_1.3.3-17+b3 mime-support_3.63 mount_2.34-0.1 ncurses-base_6.1+20190803-1 ncurses-bin_6.1+20190803-1 passwd_1:4.7-2 patch_2.7.6-6 perl_5.28.1-6 perl-base_5.28.1-6 perl-modules-5.28_5.28.1-6 pkg-config_0.29-6 po-debconf_1.0.21 poppler-data_0.4.9-2 preview-latex-style_11.91-2 python_2.7.16-1 python-minimal_2.7.16-1 python2_2.7.16-1 python2-minimal_2.7.16-1 python2.7_2.7.16-3 python2.7-minimal_2.7.16-3 python3_3.7.3-1 python3-minimal_3.7.3-1 python3.7_3.7.4-3 python3.7-minimal_3.7.4-3 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-essential-dummy_0.invalid.0 sbuild-build-depends-probabel-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.96~beta-1 t1utils_1.41-3 tar_1.30+dfsg-6+b1 tex-common_6.12 texlive-base_2019.20190830-1 texlive-binaries_2019.20190605.51237-2 texlive-fonts-recommended_2019.20190830-1 texlive-latex-base_2019.20190830-1 texlive-latex-extra_2019.20190830-1 texlive-latex-recommended_2019.20190830-1 texlive-pictures_2019.20190830-1 tzdata_2019b-2 ucf_3.0038+nmu1 util-linux_2.34-0.1 x11-common_1:7.7+19 xdg-utils_1.1.3-1 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-1+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Mon Feb 4 09:42:21 2019 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./probabel_0.5.0+dfsg-3.dsc dpkg-source: info: extracting probabel in /<>/probabel-0.5.0+dfsg dpkg-source: info: unpacking probabel_0.5.0+dfsg.orig.tar.xz dpkg-source: info: unpacking probabel_0.5.0+dfsg-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying c++11.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.s390x DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-87258f60-3a24-4bdd-8730-d58a29d36ce3 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package probabel dpkg-buildpackage: info: source version 0.5.0+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type s390x-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture s390x fakeroot debian/rules clean dh clean dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>/probabel-0.5.0+dfsg' dh_auto_configure -- --disable-silent-rules --with-eigen-include-path=/usr/include/eigen3 ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/s390x-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=s390x-linux-gnu --disable-silent-rules --with-eigen-include-path=/usr/include/eigen3 configure: loading site script /etc/dpkg-cross/cross-config.s390x checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for s390x-linux-gnu-strip... s390x-linux-gnu-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking whether to enable maintainer-specific portions of Makefiles... no checking for s390x-linux-gnu-gcc... s390x-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether s390x-linux-gnu-gcc accepts -g... yes checking for s390x-linux-gnu-gcc option to accept ISO C89... none needed checking whether s390x-linux-gnu-gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of s390x-linux-gnu-gcc... none checking whether ln -s works... yes checking for s390x-linux-gnu-g++... s390x-linux-gnu-g++ checking whether we are using the GNU C++ compiler... yes checking whether s390x-linux-gnu-g++ accepts -g... yes checking dependency style of s390x-linux-gnu-g++... none checking how to run the C++ preprocessor... s390x-linux-gnu-g++ -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for size_t... yes checking for working alloca.h... yes checking for alloca... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking for inttypes.h... (cached) yes checking libintl.h usability... yes checking libintl.h presence... yes checking for libintl.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdint.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking wchar.h usability... yes checking wchar.h presence... yes checking for wchar.h... yes checking wctype.h usability... yes checking wctype.h presence... yes checking for wctype.h... yes checking Eigen/Dense usability... yes checking Eigen/Dense presence... yes checking for Eigen/Dense... yes checking Eigen/LU usability... yes checking Eigen/LU presence... yes checking for Eigen/LU... yes checking for stdbool.h that conforms to C99... no checking for _Bool... no checking for inline... inline checking for off_t... yes checking for size_t... (cached) yes checking for error_at_line... yes checking for pow... yes checking for putenv... yes checking for sqrt... yes checking for strdup... yes checking for strncasecmp... yes checking for floor... yes checking for working strtod... no checking for pow... (cached) yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for _LARGEFILE_SOURCE value needed for large files... no checking for a sed that does not truncate output... /bin/sed checking for gawk... (cached) mawk checking for R... no configure: R not found - Unable to do tests comparing ProbABEL output against R output configure: building of the PDF of the user manual from LaTeX source is enabled checking for pdflatex... pdflatex checking for doxygen... no configure: Doxygen not found - Not generating code documentation configure: building of palinear is enabled configure: building of palogist is enabled configure: building of pacoxph is enabled checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating doc/Makefile config.status: creating examples/Makefile config.status: creating checks/Makefile config.status: creating checks/R-tests/Makefile config.status: creating src/config.h config.status: executing depfiles commands make[1]: Leaving directory '/<>/probabel-0.5.0+dfsg' dh_auto_build -a make -j1 make[1]: Entering directory '/<>/probabel-0.5.0+dfsg' Making all in src make[2]: Entering directory '/<>/probabel-0.5.0+dfsg/src' make all-am make[3]: Entering directory '/<>/probabel-0.5.0+dfsg/src' s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-main.o `test -f 'main.cpp' || echo './'`main.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-invsigma.o `test -f 'invsigma.cpp' || echo './'`invsigma.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-gendata.o `test -f 'gendata.cpp' || echo './'`gendata.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-eigen_mematrix.o `test -f 'eigen_mematrix.cpp' || echo './'`eigen_mematrix.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-command_line_settings.o `test -f 'command_line_settings.cpp' || echo './'`command_line_settings.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-reg1.o `test -f 'reg1.cpp' || echo './'`reg1.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-usage.o `test -f 'usage.cpp' || echo './'`usage.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-utilities.o `test -f 'utilities.cpp' || echo './'`utilities.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-phedata.o `test -f 'phedata.cpp' || echo './'`phedata.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-regdata.o `test -f 'regdata.cpp' || echo './'`regdata.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-maskedmatrix.o `test -f 'maskedmatrix.cpp' || echo './'`maskedmatrix.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-main_functions_dump.o `test -f 'main_functions_dump.cpp' || echo './'`main_functions_dump.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-mlinfo.o `test -f 'mlinfo.cpp' || echo './'`mlinfo.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-AbstractMatrix.o `test -f 'fvlib/AbstractMatrix.cpp' || echo './'`fvlib/AbstractMatrix.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-CastUtils.o `test -f 'fvlib/CastUtils.cpp' || echo './'`fvlib/CastUtils.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-convert_util.o `test -f 'fvlib/convert_util.cpp' || echo './'`fvlib/convert_util.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-FileVector.o `test -f 'fvlib/FileVector.cpp' || echo './'`fvlib/FileVector.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-FilteredMatrix.o `test -f 'fvlib/FilteredMatrix.cpp' || echo './'`fvlib/FilteredMatrix.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-frutil.o `test -f 'fvlib/frutil.cpp' || echo './'`fvlib/frutil.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-Logger.o `test -f 'fvlib/Logger.cpp' || echo './'`fvlib/Logger.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-RealHandlerWrapper.o `test -f 'fvlib/RealHandlerWrapper.cpp' || echo './'`fvlib/RealHandlerWrapper.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-ReusableFileHandle.o `test -f 'fvlib/ReusableFileHandle.cpp' || echo './'`fvlib/ReusableFileHandle.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-Transposer.o `test -f 'fvlib/Transposer.cpp' || echo './'`fvlib/Transposer.cpp s390x-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o palinear palinear-main.o palinear-invsigma.o palinear-gendata.o palinear-eigen_mematrix.o palinear-command_line_settings.o palinear-reg1.o palinear-usage.o palinear-utilities.o palinear-phedata.o palinear-regdata.o palinear-maskedmatrix.o palinear-main_functions_dump.o palinear-mlinfo.o fvlib/palinear-AbstractMatrix.o fvlib/palinear-CastUtils.o fvlib/palinear-convert_util.o fvlib/palinear-FileVector.o fvlib/palinear-FilteredMatrix.o fvlib/palinear-frutil.o fvlib/palinear-Logger.o fvlib/palinear-RealHandlerWrapper.o fvlib/palinear-ReusableFileHandle.o fvlib/palinear-Transposer.o s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-main.o `test -f 'main.cpp' || echo './'`main.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-invsigma.o `test -f 'invsigma.cpp' || echo './'`invsigma.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-gendata.o `test -f 'gendata.cpp' || echo './'`gendata.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-eigen_mematrix.o `test -f 'eigen_mematrix.cpp' || echo './'`eigen_mematrix.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-command_line_settings.o `test -f 'command_line_settings.cpp' || echo './'`command_line_settings.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-reg1.o `test -f 'reg1.cpp' || echo './'`reg1.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-usage.o `test -f 'usage.cpp' || echo './'`usage.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-utilities.o `test -f 'utilities.cpp' || echo './'`utilities.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-phedata.o `test -f 'phedata.cpp' || echo './'`phedata.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-regdata.o `test -f 'regdata.cpp' || echo './'`regdata.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-maskedmatrix.o `test -f 'maskedmatrix.cpp' || echo './'`maskedmatrix.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-main_functions_dump.o `test -f 'main_functions_dump.cpp' || echo './'`main_functions_dump.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-mlinfo.o `test -f 'mlinfo.cpp' || echo './'`mlinfo.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-AbstractMatrix.o `test -f 'fvlib/AbstractMatrix.cpp' || echo './'`fvlib/AbstractMatrix.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-CastUtils.o `test -f 'fvlib/CastUtils.cpp' || echo './'`fvlib/CastUtils.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-convert_util.o `test -f 'fvlib/convert_util.cpp' || echo './'`fvlib/convert_util.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-FileVector.o `test -f 'fvlib/FileVector.cpp' || echo './'`fvlib/FileVector.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-FilteredMatrix.o `test -f 'fvlib/FilteredMatrix.cpp' || echo './'`fvlib/FilteredMatrix.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-frutil.o `test -f 'fvlib/frutil.cpp' || echo './'`fvlib/frutil.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-Logger.o `test -f 'fvlib/Logger.cpp' || echo './'`fvlib/Logger.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-RealHandlerWrapper.o `test -f 'fvlib/RealHandlerWrapper.cpp' || echo './'`fvlib/RealHandlerWrapper.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-ReusableFileHandle.o `test -f 'fvlib/ReusableFileHandle.cpp' || echo './'`fvlib/ReusableFileHandle.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-Transposer.o `test -f 'fvlib/Transposer.cpp' || echo './'`fvlib/Transposer.cpp s390x-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o palogist palogist-main.o palogist-invsigma.o palogist-gendata.o palogist-eigen_mematrix.o palogist-command_line_settings.o palogist-reg1.o palogist-usage.o palogist-utilities.o palogist-phedata.o palogist-regdata.o palogist-maskedmatrix.o palogist-main_functions_dump.o palogist-mlinfo.o fvlib/palogist-AbstractMatrix.o fvlib/palogist-CastUtils.o fvlib/palogist-convert_util.o fvlib/palogist-FileVector.o fvlib/palogist-FilteredMatrix.o fvlib/palogist-frutil.o fvlib/palogist-Logger.o fvlib/palogist-RealHandlerWrapper.o fvlib/palogist-ReusableFileHandle.o fvlib/palogist-Transposer.o s390x-linux-gnu-gcc -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-coxfit2.o `test -f 'coxfit2.c' || echo './'`coxfit2.c s390x-linux-gnu-gcc -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-chinv2.o `test -f 'chinv2.c' || echo './'`chinv2.c s390x-linux-gnu-gcc -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-cholesky2.o `test -f 'cholesky2.c' || echo './'`cholesky2.c s390x-linux-gnu-gcc -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o 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'./'`maskedmatrix.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-main_functions_dump.o `test -f 'main_functions_dump.cpp' || echo './'`main_functions_dump.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-mlinfo.o `test -f 'mlinfo.cpp' || echo './'`mlinfo.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/pacoxph-AbstractMatrix.o `test -f 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-I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/pacoxph-Transposer.o `test -f 'fvlib/Transposer.cpp' || echo './'`fvlib/Transposer.cpp s390x-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-coxph_data.o `test -f 'coxph_data.cpp' || echo './'`coxph_data.cpp s390x-linux-gnu-g++ -I ../src/include -g -O2 -fdebug-prefix-map=/<>/probabel-0.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o pacoxph pacoxph-coxfit2.o pacoxph-chinv2.o pacoxph-cholesky2.o pacoxph-chsolve2.o pacoxph-dmatrix.o pacoxph-main.o pacoxph-invsigma.o pacoxph-gendata.o pacoxph-eigen_mematrix.o pacoxph-command_line_settings.o pacoxph-reg1.o pacoxph-usage.o pacoxph-utilities.o pacoxph-phedata.o pacoxph-regdata.o pacoxph-maskedmatrix.o pacoxph-main_functions_dump.o pacoxph-mlinfo.o fvlib/pacoxph-AbstractMatrix.o fvlib/pacoxph-CastUtils.o fvlib/pacoxph-convert_util.o fvlib/pacoxph-FileVector.o fvlib/pacoxph-FilteredMatrix.o fvlib/pacoxph-frutil.o fvlib/pacoxph-Logger.o fvlib/pacoxph-RealHandlerWrapper.o fvlib/pacoxph-ReusableFileHandle.o fvlib/pacoxph-Transposer.o pacoxph-coxph_data.o make[3]: Leaving directory '/<>/probabel-0.5.0+dfsg/src' make[2]: Leaving directory '/<>/probabel-0.5.0+dfsg/src' Making all in doc make[2]: Entering directory '/<>/probabel-0.5.0+dfsg/doc' === Making ProbABEL_manual.aux file === pdflatex ./ProbABEL_manual.tex This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./ProbABEL_manual.tex LaTeX2e <2018-12-01> 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Let's in-stall in a sub-di-rec-tory of your home di-rec-tory, e.g. \T1/cmtt/m/n/12 /home/yourusername/ProbABEL\T1/cmr /m/n/12 : Overfull \hbox (4.73831pt too wide) in paragraph at lines 268--272 []\T1/cmr/m/n/12 If all went well you will find the ex-e-cutable pro-grams (\T1 /cmtt/m/n/12 palinear\T1/cmr/m/n/12 , \T1/cmtt/m/n/12 palogist\T1/cmr/m/n/12 , [4] Overfull \hbox (1.38382pt too wide) in paragraph at lines 274--279 \T1/cmtt/m/n/12 ProbABEL \T1/cmr/m/n/12 takes three files as in-put: a file con -tain-ing SNP in-for-ma-tion (e.g. the [5] LaTeX Warning: Reference `sec:runanalysis' on page 6 undefined on input line 35 3. [6] Overfull \hbox (12.56972pt too wide) in paragraph at lines 377--384 []\T1/cmr/m/n/12 In the case of lin-ear or lo-gis-tic re-gres-sion (pro-grams \ T1/cmtt/m/n/12 palinear \T1/cmr/m/n/12 and \T1/cmtt/m/n/12 palogist\T1/cmr/m/n/ 12 , Overfull \hbox (14.44846pt too wide) in paragraph at lines 377--384 \T1/cmr/m/n/12 lin-ear re-gres-sion anal-y-sis fol-low here (also to be found i n \T1/cmtt/m/n/12 examples/height.txt\T1/cmr/m/n/12 ) [7] [8] Overfull \hbox (5.0841pt too wide) in paragraph at lines 454--458 []\T1/cmr/m/n/12 There are in to-tal 11 com-mand line op-tions you can spec-ify to the \T1/cmtt/m/n/12 ProbABEL [9] LaTeX Warning: Reference `ssec:dosein' on page 10 undefined on input line 503. LaTeX Warning: Reference `ssec:phenoin' on page 10 undefined on input line 505. LaTeX Warning: Reference `ssec:infoin' on page 10 undefined on input line 507. 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Overfull \hbox (8.43651pt too wide) in paragraph at lines 552--563 \T1/cmr/m/n/12 covariance ma-trix goes as in-put pa-ram-e-ter with that op-tion , e.g. [][][][] [11] Overfull \hbox (42.14447pt too wide) in paragraph at lines 569--569 [] \T1/cmtt/m/n/12 h2.obj$InvSigma * h2.obj$h2an$estimate[length(h2.obj$h2an$e stimate)][] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `\lstinline' on input line 585. [12] LaTeX Warning: Reference `sec:allcov' on page 13 undefined on input line 621. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `\lstinline' on input line 626. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `\lstinline' on input line 643. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `\lstinline' on input line 662. LaTeX Warning: Reference `sec:methodology' on page 13 undefined on input line 6 66. [13] [14] Overfull \hbox (4.6171pt too wide) in paragraph at lines 746--750 \T1/cmr/m/n/12 After in-stalling \T1/cmtt/m/n/12 ProbABEL \T1/cmr/m/n/12 you ca n find the \T1/cmtt/m/n/12 prepare_data.R \T1/cmr/m/n/12 file in the \T1/cmtt/m /n/12 scripts [15] [16] Overfull \hbox (8.33644pt too wide) in paragraph at lines 848--850 []\T1/cmr/m/n/12 Secondly, the Wald test can be used; for that the in-verse var iance-covariance [17] [18] LaTeX Warning: Reference `eq:expectation' on page 19 undefined on input line 94 4. LaTeX Warning: Reference `kinship' on page 19 undefined on input line 956. [19] [20] [21] No file ProbABEL_manual.ind. [22] (./ProbABEL_manual.aux) kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecti1200 mkdir: cannot create directory '././sbuild-nonexistent': Permission denied mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecti1200 This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecti1200.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecti.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/extextit.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exileast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exilwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exilig.mf Ok [25] [26] [27] [28] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exitalp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exillett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exidigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exiligtb.mf Ok) ) ) ) (some charht values had to be adjusted by as much as 0.07143pt) Font metrics written on ecti1200.tfm. Output written on ecti1200.600gf (256 characters, 63048 bytes). Transcript written on ecti1200.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/ecti1200.600pk: successfully generated. Package rerunfilecheck Warning: File `ProbABEL_manual.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ectt1095 mkdir: cannot create directory '././sbuild-nonexistent': Permission denied mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ectt1095 This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt1095.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exmligtb.mf Ok) ) ) ) Font metrics written on ectt1095.tfm. Output written on ectt1095.600gf (256 characters, 47796 bytes). Transcript written on ectt1095.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/ectt1095.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ectt1440 mkdir: cannot create directory '././sbuild-nonexistent': Permission denied mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ectt1440 This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt1440.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exmligtb.mf Ok) ) ) ) Font metrics written on ectt1440.tfm. Output written on ectt1440.600gf (256 characters, 61024 bytes). Transcript written on ectt1440.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/ectt1440.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecrm1000 mkdir: cannot create directory '././sbuild-nonexistent': Permission denied mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecrm1000 This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm1000.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrligtb.mf Ok) ) ) ) (some charht values had to be adjusted by as much as 0.06586pt) Font metrics written on ecrm1000.tfm. Output written on ecrm1000.600gf (256 characters, 51184 bytes). Transcript written on ecrm1000.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/ecrm1000.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecrm0700 mkdir: cannot create directory '././sbuild-nonexistent': Permission denied mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecrm0700 This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm0700.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrligtb.mf Ok) ) ) ) Font metrics written on ecrm0700.tfm. Output written on ecrm0700.600gf (256 characters, 37344 bytes). Transcript written on ecrm0700.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/ecrm0700.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ectt0800 mkdir: cannot create directory '././sbuild-nonexistent': Permission denied mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ectt0800 This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt0800.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exmligtb.mf Ok) ) ) ) Font metrics written on ectt0800.tfm. Output written on ectt0800.600gf (256 characters, 35488 bytes). Transcript written on ectt0800.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/ectt0800.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecbx1200 mkdir: cannot create directory '././sbuild-nonexistent': Permission denied mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecbx1200 This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecbx1200.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecbx.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrligtb.mf Ok) ) ) ) Font metrics written on ecbx1200.tfm. Output written on ecbx1200.600gf (256 characters, 59220 bytes). Transcript written on ecbx1200.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/ecbx1200.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecrm0800 mkdir: cannot create directory '././sbuild-nonexistent': Permission denied mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecrm0800 This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm0800.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrligtb.mf Ok) ) ) ) (some charht values had to be adjusted by as much as 0.06445pt) Font metrics written on ecrm0800.tfm. Output written on ecrm0800.600gf (256 characters, 41732 bytes). Transcript written on ecrm0800.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/ecrm0800.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ectt1000 mkdir: cannot create directory '././sbuild-nonexistent': Permission denied mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ectt1000 This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt1000.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exmligtb.mf Ok) ) ) ) Font metrics written on ectt1000.tfm. Output written on ectt1000.600gf (256 characters, 43832 bytes). Transcript written on ectt1000.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/ectt1000.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 tcrm1200 mkdir: cannot create directory '././sbuild-nonexistent': Permission denied mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input tcrm1200 This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tcrm1200.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tcrm.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymb.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txpseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [27] [29]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txgen.mf Ok [100] [109] [98] [99] [108]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymbol.mf Ok [13] [18] [21] [22] [23] [24] [25] [26] [28] [31] [32] [36] [39] [44] [45] [46] [42] [47] [60] [61] [62] [77] [79] [87] [110] [91] [93] [94] [95] [96] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [171] [172] [173] [174] [175] [177] [176] [180] [181] [182] [183] [184] [187] [191] [214] [246]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txromod.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrsuper.mf Ok [185] [178] [179] [170] [186]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrfract.mf Ok [188] [189] [190]) ) ) ) (some charht values had to be adjusted by as much as 0.06665pt) Font metrics written on tcrm1200.tfm. Output written on tcrm1200.600gf (128 characters, 28032 bytes). Transcript written on tcrm1200.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/tcrm1200.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecbx1440 mkdir: cannot create directory '././sbuild-nonexistent': Permission denied mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecbx1440 This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecbx1440.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecbx.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrligtb.mf Ok) ) ) ) (some charht values had to be adjusted by as much as 0.10997pt) Font metrics written on ecbx1440.tfm. Output written on ecbx1440.600gf (256 characters, 70764 bytes). Transcript written on ecbx1440.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/ecbx1440.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ectt1728 mkdir: cannot create directory '././sbuild-nonexistent': Permission denied mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ectt1728 This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt1728.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exmligtb.mf Ok) ) ) ) Font metrics written on ectt1728.tfm. Output written on ectt1728.600gf (256 characters, 72884 bytes). Transcript written on ectt1728.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/ectt1728.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ectt1200 mkdir: cannot create directory '././sbuild-nonexistent': Permission denied mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ectt1200 This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt1200.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exmligtb.mf Ok) ) ) ) Font metrics written on ectt1200.tfm. Output written on ectt1200.600gf (256 characters, 51736 bytes). Transcript written on ectt1200.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/ectt1200.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecrm1200 mkdir: cannot create directory '././sbuild-nonexistent': Permission denied mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecrm1200 This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm1200.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrligtb.mf Ok) ) ) ) (some charht values had to be adjusted by as much as 0.07143pt) Font metrics written on ecrm1200.tfm. Output written on ecrm1200.600gf (256 characters, 60320 bytes). Transcript written on ecrm1200.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/ecrm1200.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecbx1728 mkdir: cannot create directory '././sbuild-nonexistent': Permission denied mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecbx1728 This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecbx1728.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecbx.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrligtb.mf Ok) ) ) ) (some charht values had to be adjusted by as much as 0.13197pt) Font metrics written on ecbx1728.tfm. Output written on ecbx1728.600gf (256 characters, 84848 bytes). Transcript written on ecbx1728.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/ecbx1728.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecrm1095 mkdir: cannot create directory '././sbuild-nonexistent': Permission denied mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecrm1095 This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm1095.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrligtb.mf Ok) ) ) ) (some charht values had to be adjusted by as much as 0.07599pt) Font metrics written on ecrm1095.tfm. Output written on ecrm1095.600gf (256 characters, 55424 bytes). Transcript written on ecrm1095.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/ecrm1095.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecrm1440 mkdir: cannot create directory '././sbuild-nonexistent': Permission denied mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecrm1440 This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm1440.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrligtb.mf Ok) ) ) ) (some charht values had to be adjusted by as much as 0.08084pt) Font metrics written on ecrm1440.tfm. Output written on ecrm1440.600gf (256 characters, 71064 bytes). Transcript written on ecrm1440.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/ecrm1440.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecti1440 mkdir: cannot create directory '././sbuild-nonexistent': Permission denied mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecti1440 This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecti1440.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecti.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/extextit.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exileast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exilwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exilig.mf Ok [25] [26] [27] [28] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exitalp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exillett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exidigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exiligtb.mf Ok) ) ) ) (some charht values had to be adjusted by as much as 0.07997pt) Font metrics written on ecti1440.tfm. Output written on ecti1440.600gf (256 characters, 74296 bytes). Transcript written on ecti1440.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/ecti1440.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecrm2074 mkdir: cannot create directory '././sbuild-nonexistent': Permission denied mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecrm2074 This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm2074.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrligtb.mf Ok) ) ) ) (some charht values had to be adjusted by as much as 0.1171pt) Font metrics written on ecrm2074.tfm. Output written on ecrm2074.600gf (256 characters, 101464 bytes). Transcript written on ecrm2074.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/ecrm2074.600pk: successfully generated. Output written on ProbABEL_manual.pdf (22 pages, 397926 bytes). Transcript written on ProbABEL_manual.log. diff: .btmp: No such file or directory === Making PDF === pdflatex ./ProbABEL_manual.tex This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./ProbABEL_manual.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size12.clo)) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty (/usr/share/texlive/texmf-dist/tex/latex/base/t1enc.def)) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty (/usr/share/texlive/texmf-dist/tex/latex/base/ts1enc.def (/usr/share/texlive/texmf-dist/tex/latex/base/ts1enc.dfu))) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/svgnam.def)) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) (/usr/share/texlive/texmf-dist/tex/latex/titleref/titleref.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) Writing index file ProbABEL_manual.idx (./ProbABEL_manual.aux) (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmr.fd ) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./ProbABEL_manual.out) (./ProbABEL_manual.out) (./ProbABEL_manual.toc (/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd) [1{/var/lib/texmf/font s/map/pdftex/updmap/pdftex.map}]) [2] [3] Overfull \hbox (7.36137pt too wide) in paragraph at lines 171--174 \T1/cmr/m/n/12 Prob-A-BEL web page ([][]$\T1/cmtt/m/n/12 http : / / www . genab el . org / packages / ProbABEL$[][]\T1/cmr/m/n/12 ). [4] Overfull \hbox (123.30513pt too wide) in paragraph at lines 238--241 \T1/cmtt/m/n/12 ProbABEL\T1/cmr/m/n/12 . Let's in-stall in a sub-di-rec-tory of your home di-rec-tory, e.g. \T1/cmtt/m/n/12 /home/yourusername/ProbABEL\T1/cmr /m/n/12 : Overfull \hbox (4.73831pt too wide) in paragraph at lines 268--272 []\T1/cmr/m/n/12 If all went well you will find the ex-e-cutable pro-grams (\T1 /cmtt/m/n/12 palinear\T1/cmr/m/n/12 , \T1/cmtt/m/n/12 palogist\T1/cmr/m/n/12 , [5] Overfull \hbox (1.38382pt too wide) in paragraph at lines 274--279 \T1/cmtt/m/n/12 ProbABEL \T1/cmr/m/n/12 takes three files as in-put: a file con -tain-ing SNP in-for-ma-tion (e.g. the [6] [7] Overfull \hbox (12.56972pt too wide) in paragraph at lines 377--384 []\T1/cmr/m/n/12 In the case of lin-ear or lo-gis-tic re-gres-sion (pro-grams \ T1/cmtt/m/n/12 palinear \T1/cmr/m/n/12 and \T1/cmtt/m/n/12 palogist\T1/cmr/m/n/ 12 , Overfull \hbox (14.44846pt too wide) in paragraph at lines 377--384 \T1/cmr/m/n/12 lin-ear re-gres-sion anal-y-sis fol-low here (also to be found i n \T1/cmtt/m/n/12 examples/height.txt\T1/cmr/m/n/12 ) [8] [9] Overfull \hbox (5.0841pt too wide) in paragraph at lines 454--458 []\T1/cmr/m/n/12 There are in to-tal 11 com-mand line op-tions you can spec-ify to the \T1/cmtt/m/n/12 ProbABEL [10] [11] Overfull \hbox (17.4505pt too wide) in paragraph at lines 512--512 []\T1/cmtt/m/n/12 palinear -p height.txt -d gtdata/test.mldose -i gtdata/test.m linfo[] Overfull \hbox (29.79749pt too wide) in paragraph at lines 535--535 []\T1/cmtt/m/n/12 palinear -p height.txt -d gtdata/test.mlprob -i gtdata/test.m linfo \[] Overfull \hbox (54.49146pt too wide) in paragraph at lines 545--545 []\T1/cmtt/m/n/12 palinear -p height.txt -d gtdata/test.mlprob.fvi -i gtdata/te st.mlinfo \[] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `\lstinline' on input line 550. Overfull \hbox (8.43651pt too wide) in paragraph at lines 552--563 \T1/cmr/m/n/12 covariance ma-trix goes as in-put pa-ram-e-ter with that op-tion , e.g. [][][][] [12] Overfull \hbox (42.14447pt too wide) in paragraph at lines 569--569 [] \T1/cmtt/m/n/12 h2.obj$InvSigma * h2.obj$h2an$estimate[length(h2.obj$h2an$e stimate)][] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `\lstinline' on input line 585. [13] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `\lstinline' on input line 626. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `\lstinline' on input line 643. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `\lstinline' on input line 662. [14] [15] Overfull \hbox (4.6171pt too wide) in paragraph at lines 746--750 \T1/cmr/m/n/12 After in-stalling \T1/cmtt/m/n/12 ProbABEL \T1/cmr/m/n/12 you ca n find the \T1/cmtt/m/n/12 prepare_data.R \T1/cmr/m/n/12 file in the \T1/cmtt/m /n/12 scripts [16] [17] Overfull \hbox (8.33644pt too wide) in paragraph at lines 848--850 []\T1/cmr/m/n/12 Secondly, the Wald test can be used; for that the in-verse var iance-covariance [18] [19] [20] [21] [22] No file ProbABEL_manual.ind. [23] (./ProbABEL_manual.aux) LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on ProbABEL_manual.pdf (23 pages, 404378 bytes). Transcript written on ProbABEL_manual.log. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ** Re-running LaTeX ** This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./ProbABEL_manual.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size12.clo)) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty (/usr/share/texlive/texmf-dist/tex/latex/base/t1enc.def)) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty (/usr/share/texlive/texmf-dist/tex/latex/base/ts1enc.def (/usr/share/texlive/texmf-dist/tex/latex/base/ts1enc.dfu))) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/svgnam.def)) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) (/usr/share/texlive/texmf-dist/tex/latex/titleref/titleref.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) Writing index file ProbABEL_manual.idx (./ProbABEL_manual.aux) (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmr.fd ) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./ProbABEL_manual.out) (./ProbABEL_manual.out) (./ProbABEL_manual.toc (/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd) [1{/var/lib/texmf/font s/map/pdftex/updmap/pdftex.map}]) [2] [3] Overfull \hbox (7.36137pt too wide) in paragraph at lines 171--174 \T1/cmr/m/n/12 Prob-A-BEL web page ([][]$\T1/cmtt/m/n/12 http : / / www . genab el . org / packages / ProbABEL$[][]\T1/cmr/m/n/12 ). [4] Overfull \hbox (123.30513pt too wide) in paragraph at lines 238--241 \T1/cmtt/m/n/12 ProbABEL\T1/cmr/m/n/12 . Let's in-stall in a sub-di-rec-tory of your home di-rec-tory, e.g. \T1/cmtt/m/n/12 /home/yourusername/ProbABEL\T1/cmr /m/n/12 : Overfull \hbox (4.73831pt too wide) in paragraph at lines 268--272 []\T1/cmr/m/n/12 If all went well you will find the ex-e-cutable pro-grams (\T1 /cmtt/m/n/12 palinear\T1/cmr/m/n/12 , \T1/cmtt/m/n/12 palogist\T1/cmr/m/n/12 , [5] Overfull \hbox (1.38382pt too wide) in paragraph at lines 274--279 \T1/cmtt/m/n/12 ProbABEL \T1/cmr/m/n/12 takes three files as in-put: a file con -tain-ing SNP in-for-ma-tion (e.g. the [6] [7] Overfull \hbox (12.56972pt too wide) in paragraph at lines 377--384 []\T1/cmr/m/n/12 In the case of lin-ear or lo-gis-tic re-gres-sion (pro-grams \ T1/cmtt/m/n/12 palinear \T1/cmr/m/n/12 and \T1/cmtt/m/n/12 palogist\T1/cmr/m/n/ 12 , Overfull \hbox (14.44846pt too wide) in paragraph at lines 377--384 \T1/cmr/m/n/12 lin-ear re-gres-sion anal-y-sis fol-low here (also to be found i n \T1/cmtt/m/n/12 examples/height.txt\T1/cmr/m/n/12 ) [8] [9] Overfull \hbox (5.0841pt too wide) in paragraph at lines 454--458 []\T1/cmr/m/n/12 There are in to-tal 11 com-mand line op-tions you can spec-ify to the \T1/cmtt/m/n/12 ProbABEL [10] [11] Overfull \hbox (17.4505pt too wide) in paragraph at lines 512--512 []\T1/cmtt/m/n/12 palinear -p height.txt -d gtdata/test.mldose -i gtdata/test.m linfo[] Overfull \hbox (29.79749pt too wide) in paragraph at lines 535--535 []\T1/cmtt/m/n/12 palinear -p height.txt -d gtdata/test.mlprob -i gtdata/test.m linfo \[] Overfull \hbox (54.49146pt too wide) in paragraph at lines 545--545 []\T1/cmtt/m/n/12 palinear -p height.txt -d gtdata/test.mlprob.fvi -i gtdata/te st.mlinfo \[] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `\lstinline' on input line 550. Overfull \hbox (8.43651pt too wide) in paragraph at lines 552--563 \T1/cmr/m/n/12 covariance ma-trix goes as in-put pa-ram-e-ter with that op-tion , e.g. [][][][] [12] Overfull \hbox (42.14447pt too wide) in paragraph at lines 569--569 [] \T1/cmtt/m/n/12 h2.obj$InvSigma * h2.obj$h2an$estimate[length(h2.obj$h2an$e stimate)][] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `\lstinline' on input line 585. [13] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `\lstinline' on input line 626. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `\lstinline' on input line 643. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `\lstinline' on input line 662. [14] [15] Overfull \hbox (4.6171pt too wide) in paragraph at lines 746--750 \T1/cmr/m/n/12 After in-stalling \T1/cmtt/m/n/12 ProbABEL \T1/cmr/m/n/12 you ca n find the \T1/cmtt/m/n/12 prepare_data.R \T1/cmr/m/n/12 file in the \T1/cmtt/m /n/12 scripts [16] [17] Overfull \hbox (8.33644pt too wide) in paragraph at lines 848--850 []\T1/cmr/m/n/12 Secondly, the Wald test can be used; for that the in-verse var iance-covariance [18] [19] [20] [21] [22] No file ProbABEL_manual.ind. [23] (./ProbABEL_manual.aux) ) (see the transcript file for additional information) Output written on ProbABEL_manual.pdf (23 pages, 404387 bytes). Transcript written on ProbABEL_manual.log. === Making index === makeindex ProbABEL_manual This is makeindex, version 2.15 [TeX Live 2019] (kpathsea + Thai support). Scanning input file ProbABEL_manual.idx....done (3 entries accepted, 0 rejected). Sorting entries....done (4 comparisons). Generating output file ProbABEL_manual.ind....done (14 lines written, 0 warnings). Output written in ProbABEL_manual.ind. Transcript written in ProbABEL_manual.ilg. === Making final PDF === pdflatex ./ProbABEL_manual.tex This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./ProbABEL_manual.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size12.clo)) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty (/usr/share/texlive/texmf-dist/tex/latex/base/t1enc.def)) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty (/usr/share/texlive/texmf-dist/tex/latex/base/ts1enc.def (/usr/share/texlive/texmf-dist/tex/latex/base/ts1enc.dfu))) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/svgnam.def)) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) (/usr/share/texlive/texmf-dist/tex/latex/titleref/titleref.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) Writing index file ProbABEL_manual.idx (./ProbABEL_manual.aux) (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmr.fd ) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./ProbABEL_manual.out) (./ProbABEL_manual.out) (./ProbABEL_manual.toc (/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd) [1{/var/lib/texmf/font s/map/pdftex/updmap/pdftex.map}]) [2] [3] Overfull \hbox (7.36137pt too wide) in paragraph at lines 171--174 \T1/cmr/m/n/12 Prob-A-BEL web page ([][]$\T1/cmtt/m/n/12 http : / / www . genab el . org / packages / ProbABEL$[][]\T1/cmr/m/n/12 ). [4] Overfull \hbox (123.30513pt too wide) in paragraph at lines 238--241 \T1/cmtt/m/n/12 ProbABEL\T1/cmr/m/n/12 . Let's in-stall in a sub-di-rec-tory of your home di-rec-tory, e.g. \T1/cmtt/m/n/12 /home/yourusername/ProbABEL\T1/cmr /m/n/12 : Overfull \hbox (4.73831pt too wide) in paragraph at lines 268--272 []\T1/cmr/m/n/12 If all went well you will find the ex-e-cutable pro-grams (\T1 /cmtt/m/n/12 palinear\T1/cmr/m/n/12 , \T1/cmtt/m/n/12 palogist\T1/cmr/m/n/12 , [5] Overfull \hbox (1.38382pt too wide) in paragraph at lines 274--279 \T1/cmtt/m/n/12 ProbABEL \T1/cmr/m/n/12 takes three files as in-put: a file con -tain-ing SNP in-for-ma-tion (e.g. the [6] [7] Overfull \hbox (12.56972pt too wide) in paragraph at lines 377--384 []\T1/cmr/m/n/12 In the case of lin-ear or lo-gis-tic re-gres-sion (pro-grams \ T1/cmtt/m/n/12 palinear \T1/cmr/m/n/12 and \T1/cmtt/m/n/12 palogist\T1/cmr/m/n/ 12 , Overfull \hbox (14.44846pt too wide) in paragraph at lines 377--384 \T1/cmr/m/n/12 lin-ear re-gres-sion anal-y-sis fol-low here (also to be found i n \T1/cmtt/m/n/12 examples/height.txt\T1/cmr/m/n/12 ) [8] [9] Overfull \hbox (5.0841pt too wide) in paragraph at lines 454--458 []\T1/cmr/m/n/12 There are in to-tal 11 com-mand line op-tions you can spec-ify to the \T1/cmtt/m/n/12 ProbABEL [10] [11] Overfull \hbox (17.4505pt too wide) in paragraph at lines 512--512 []\T1/cmtt/m/n/12 palinear -p height.txt -d gtdata/test.mldose -i gtdata/test.m linfo[] Overfull \hbox (29.79749pt too wide) in paragraph at lines 535--535 []\T1/cmtt/m/n/12 palinear -p height.txt -d gtdata/test.mlprob -i gtdata/test.m linfo \[] Overfull \hbox (54.49146pt too wide) in paragraph at lines 545--545 []\T1/cmtt/m/n/12 palinear -p height.txt -d gtdata/test.mlprob.fvi -i gtdata/te st.mlinfo \[] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `\lstinline' on input line 550. Overfull \hbox (8.43651pt too wide) in paragraph at lines 552--563 \T1/cmr/m/n/12 covariance ma-trix goes as in-put pa-ram-e-ter with that op-tion , e.g. [][][][] [12] Overfull \hbox (42.14447pt too wide) in paragraph at lines 569--569 [] \T1/cmtt/m/n/12 h2.obj$InvSigma * h2.obj$h2an$estimate[length(h2.obj$h2an$e stimate)][] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `\lstinline' on input line 585. [13] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `\lstinline' on input line 626. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `\lstinline' on input line 643. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `\lstinline' on input line 662. [14] [15] Overfull \hbox (4.6171pt too wide) in paragraph at lines 746--750 \T1/cmr/m/n/12 After in-stalling \T1/cmtt/m/n/12 ProbABEL \T1/cmr/m/n/12 you ca n find the \T1/cmtt/m/n/12 prepare_data.R \T1/cmr/m/n/12 file in the \T1/cmtt/m /n/12 scripts [16] [17] Overfull \hbox (8.33644pt too wide) in paragraph at lines 848--850 []\T1/cmr/m/n/12 Secondly, the Wald test can be used; for that the in-verse var iance-covariance [18] [19] [20] [21] [22] (./ProbABEL_manual.ind [23] [24]) (./ProbABEL_manual.aux) ) (see the transcript file for additional information) Output written on ProbABEL_manual.pdf (24 pages, 405359 bytes). Transcript written on ProbABEL_manual.log. rm ProbABEL_manual.aux make[2]: Leaving directory '/<>/probabel-0.5.0+dfsg/doc' Making all in checks make[2]: Entering directory '/<>/probabel-0.5.0+dfsg/checks' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/<>/probabel-0.5.0+dfsg/checks' Making all in examples make[2]: Entering directory '/<>/probabel-0.5.0+dfsg/examples' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/<>/probabel-0.5.0+dfsg/examples' Making all in checks/R-tests make[2]: Entering directory '/<>/probabel-0.5.0+dfsg/checks/R-tests' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/<>/probabel-0.5.0+dfsg/checks/R-tests' make[2]: Entering directory '/<>/probabel-0.5.0+dfsg' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/<>/probabel-0.5.0+dfsg' make[1]: Leaving directory '/<>/probabel-0.5.0+dfsg' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/probabel-0.5.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>/probabel-0.5.0+dfsg' Making install in src make[2]: Entering directory '/<>/probabel-0.5.0+dfsg/src' make[3]: Entering directory '/<>/probabel-0.5.0+dfsg/src' /bin/mkdir -p '/<>/probabel-0.5.0+dfsg/debian/tmp/usr/bin' /usr/bin/install -c palinear palogist pacoxph '/<>/probabel-0.5.0+dfsg/debian/tmp/usr/bin' /bin/mkdir -p '/<>/probabel-0.5.0+dfsg/debian/tmp/usr/bin' /usr/bin/install -c probabel '/<>/probabel-0.5.0+dfsg/debian/tmp/usr/bin' /bin/mkdir -p '/<>/probabel-0.5.0+dfsg/debian/tmp/etc' /usr/bin/install -c -m 644 probabel_config.cfg.example '/<>/probabel-0.5.0+dfsg/debian/tmp/etc' make install-exec-hook make[4]: Entering directory '/<>/probabel-0.5.0+dfsg/src' /bin/sed -i -e "s;probabel_config.cfg;/etc/probabel_config.cfg;" \ /<>/probabel-0.5.0+dfsg/debian/tmp/usr/bin/probabel /bin/sed -i -e "s;\./;/usr/bin/;" /<>/probabel-0.5.0+dfsg/debian/tmp/usr/bin/probabel /bin/sed -i -e "s;PROBABEL_VERSION;0.5.0;" /<>/probabel-0.5.0+dfsg/debian/tmp/usr/bin/probabel ln -s /<>/probabel-0.5.0+dfsg/debian/tmp/usr/bin/probabel /<>/probabel-0.5.0+dfsg/debian/tmp/usr/bin/probabel.pl make[4]: Leaving directory '/<>/probabel-0.5.0+dfsg/src' /bin/mkdir -p '/<>/probabel-0.5.0+dfsg/debian/tmp/usr/share/probabel/scripts' /usr/bin/install -c -m 644 prepare_data.R extIDS.pl '/<>/probabel-0.5.0+dfsg/debian/tmp/usr/share/probabel/scripts' make install-data-hook make[4]: Entering directory '/<>/probabel-0.5.0+dfsg/src' chmod a+rx /<>/probabel-0.5.0+dfsg/debian/tmp//usr/share/probabel/scripts/extIDS.pl make[4]: Leaving directory '/<>/probabel-0.5.0+dfsg/src' make[3]: Leaving directory '/<>/probabel-0.5.0+dfsg/src' make[2]: Leaving directory '/<>/probabel-0.5.0+dfsg/src' Making install in doc make[2]: Entering directory '/<>/probabel-0.5.0+dfsg/doc' make[3]: Entering directory '/<>/probabel-0.5.0+dfsg/doc' make[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/probabel-0.5.0+dfsg/debian/tmp/usr/share/doc/probabel' /usr/bin/install -c -m 644 ProbABEL_manual.tex QuickStart.txt short_coxph_data.txt short_height_base_add.out.txt.save short_height.txt short_logist_data.txt short_test.mldose test.map test.mlinfo test_regression.R COPYING LICENSE INSTALL ChangeLog TODO '/<>/probabel-0.5.0+dfsg/debian/tmp/usr/share/doc/probabel' /bin/mkdir -p '/<>/probabel-0.5.0+dfsg/debian/tmp/usr/share/doc/probabel' /usr/bin/install -c -m 644 ProbABEL_manual.pdf '/<>/probabel-0.5.0+dfsg/debian/tmp/usr/share/doc/probabel' /bin/mkdir -p '/<>/probabel-0.5.0+dfsg/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 probabel.1 probabel.pl.1 palinear.1 palogist.1 pacoxph.1 '/<>/probabel-0.5.0+dfsg/debian/tmp/usr/share/man/man1' make[3]: Leaving directory '/<>/probabel-0.5.0+dfsg/doc' make[2]: Leaving directory '/<>/probabel-0.5.0+dfsg/doc' Making install in checks make[2]: Entering directory '/<>/probabel-0.5.0+dfsg/checks' make[3]: Entering directory '/<>/probabel-0.5.0+dfsg/checks' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/probabel-0.5.0+dfsg/checks' make[2]: Leaving directory '/<>/probabel-0.5.0+dfsg/checks' Making install in examples make[2]: Entering directory '/<>/probabel-0.5.0+dfsg/examples' make[3]: Entering directory '/<>/probabel-0.5.0+dfsg/examples' make[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/probabel-0.5.0+dfsg/debian/tmp/usr/share/probabel/examples' /usr/bin/install -c -m 644 height.txt logist_data.txt mmscore_pheno.PHE coxph_data.txt mmscore.R mmscore_InvSigma_aj.sex.age.dat README '/<>/probabel-0.5.0+dfsg/debian/tmp/usr/share/probabel/examples' /bin/mkdir -p '/<>/probabel-0.5.0+dfsg/debian/tmp/usr/share/probabel/examples' /usr/bin/install -c example_qt.sh example_bt.sh example_cox.sh example_mmscore.sh '/<>/probabel-0.5.0+dfsg/debian/tmp/usr/share/probabel/examples' /bin/mkdir -p '/<>/probabel-0.5.0+dfsg/debian/tmp/usr/share/probabel/examples/gtdata' /usr/bin/install -c -m 644 gtdata/test.mldose gtdata/test.mlprob gtdata/test.mlinfo gtdata/test.map gtdata/test.dose.fvi gtdata/test.dose.fvd gtdata/test.prob.fvi gtdata/test.prob.fvd gtdata/mmscore_gen.mlinfo gtdata/mmscore_gen.mldose gtdata/mmscore_gen.mlprob gtdata/mmscore_gen.dose.fvi gtdata/mmscore_gen.dose.fvd gtdata/mmscore_gen.prob.fvi gtdata/mmscore_gen.prob.fvd '/<>/probabel-0.5.0+dfsg/debian/tmp/usr/share/probabel/examples/gtdata' make[3]: Leaving directory '/<>/probabel-0.5.0+dfsg/examples' make[2]: Leaving directory '/<>/probabel-0.5.0+dfsg/examples' Making install in checks/R-tests make[2]: Entering directory '/<>/probabel-0.5.0+dfsg/checks/R-tests' make[3]: Entering directory '/<>/probabel-0.5.0+dfsg/checks/R-tests' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/probabel-0.5.0+dfsg/checks/R-tests' make[2]: Leaving directory '/<>/probabel-0.5.0+dfsg/checks/R-tests' make[2]: Entering directory '/<>/probabel-0.5.0+dfsg' make[3]: Entering directory '/<>/probabel-0.5.0+dfsg' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/probabel-0.5.0+dfsg' make[2]: Leaving directory '/<>/probabel-0.5.0+dfsg' make[1]: Leaving directory '/<>/probabel-0.5.0+dfsg' debian/rules override_dh_install-arch make[1]: Entering directory '/<>/probabel-0.5.0+dfsg' dh_install -a rm debian/probabel/usr/bin/probabel.pl mv debian/probabel/etc/probabel_config.cfg.example debian/probabel/etc/probabel_config.cfg make[1]: Leaving directory '/<>/probabel-0.5.0+dfsg' debian/rules override_dh_installdocs-arch make[1]: Entering directory '/<>/probabel-0.5.0+dfsg' dh_installdocs -a rm debian/probabel/usr/share/doc/probabel/COPYING rm debian/probabel/usr/share/doc/probabel/INSTALL rm debian/probabel/usr/share/doc/probabel/LICENSE rm debian/probabel/usr/share/doc/probabel/ChangeLog make[1]: Leaving directory '/<>/probabel-0.5.0+dfsg' debian/rules override_dh_installchangelogs make[1]: Entering directory '/<>/probabel-0.5.0+dfsg' dh_installchangelogs doc/ChangeLog make[1]: Leaving directory '/<>/probabel-0.5.0+dfsg' dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'probabel' in '../probabel_0.5.0+dfsg-3_s390x.deb'. dpkg-deb: building package 'probabel-dbgsym' in '../probabel-dbgsym_0.5.0+dfsg-3_s390x.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../probabel_0.5.0+dfsg-3_s390x.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-09-01T02:48:48Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/resolver-5262SX/apt_archive/sbuild-build-depends-lintian-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-lintian-dummy sbuild-build-depends-probabel-dummy dpkg-scanpackages: info: Wrote 4 entries to output Packages file. Ign:1 copy:/<>/resolver-5262SX/apt_archive ./ InRelease Get:2 copy:/<>/resolver-5262SX/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-5262SX/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-5262SX/apt_archive ./ Sources [793 B] Get:5 copy:/<>/resolver-5262SX/apt_archive ./ Packages [876 B] Fetched 2632 B in 0s (136 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-op-check-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl libclone-perl libdevel-callchecker-perl libdevel-globaldestruction-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmodule-runtime-perl libmoo-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libparams-classify-perl libpath-tiny-perl librole-tiny-perl libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults Suggested packages: libdata-dump-perl ca-certificates libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libclass-xsaccessor-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libunicode-utf8-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-op-check-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl libclone-perl libdevel-callchecker-perl libdevel-globaldestruction-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmodule-runtime-perl libmoo-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libparams-classify-perl libpath-tiny-perl librole-tiny-perl libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults sbuild-build-depends-lintian-dummy:s390x 0 upgraded, 62 newly installed, 0 to remove and 0 not upgraded. Need to get 6044 kB of archives. After this operation, 17.4 MB of additional disk space will be used. Get:1 copy:/<>/resolver-5262SX/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 5.6 [19.4 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.62-1+b1 [33.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.3-7 [50.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.17-3 [524 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.17-3 [881 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b1 [71.2 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b1 [11.4 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.44-1 [223 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.21-1+b3 [13.6 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.41-1+b1 [14.6 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1 [12.6 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1 [15.7 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-globaldestruction-perl all 0.14-1 [8084 B] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 3 [6782 B] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.88-1 [320 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.066-1 [210 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.21-1 [95.5 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.20-1 [367 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1 [7642 B] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.10-1 [8362 B] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.41-1 [79.0 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b1 [25.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.74-1 [268 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 liblinux-epoll-perl amd64 0.016-1+b1 [17.0 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-loop-epoll-perl all 0.20-1 [11.9 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b5 [33.7 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-1 [101 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.53-1 [68.9 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b4 [64.2 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.000006-1 [19.4 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006003-1 [19.7 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.003004-2 [57.4 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.004004-1 [266 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.80+repack-1 [34.5 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2+b1 [91.4 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.19.0 [1256 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 6044 kB in 0s (26.0 MB/s) Selecting previously unselected package netbase. (Reading database ... 39655 files and directories currently installed.) Preparing to unpack .../00-netbase_5.6_all.deb ... Unpacking netbase (5.6) ... Selecting previously unselected package diffstat. Preparing to unpack .../01-diffstat_1.62-1+b1_amd64.deb ... Unpacking diffstat (1.62-1+b1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../02-libassuan0_2.5.3-7_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7) ... Selecting previously unselected package gpgconf. Preparing to unpack .../03-gpgconf_2.2.17-3_amd64.deb ... Unpacking gpgconf (2.2.17-3) ... Selecting previously unselected package gpg. Preparing to unpack .../04-gpg_2.2.17-3_amd64.deb ... Unpacking gpg (2.2.17-3) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../05-libapt-pkg-perl_0.1.36+b1_amd64.deb ... Unpacking libapt-pkg-perl (0.1.36+b1) ... Selecting previously unselected package libb-hooks-op-check-perl. 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Setting up sbuild-build-depends-lintian-dummy:s390x (0.invalid.0) ... Processing triggers for man-db (2.8.7-3) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.28-10) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ probabel_0.5.0+dfsg-3_s390x.changes: ------------------------------------ Format: 1.8 Date: Mon, 04 Feb 2019 10:11:46 +0100 Source: probabel Binary: probabel probabel-dbgsym Built-For-Profiles: cross nocheck Architecture: s390x Version: 0.5.0+dfsg-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: probabel - Toolset for Genome-Wide Association Analysis Changes: probabel (0.5.0+dfsg-3) unstable; urgency=medium . * Add ppc64el to architectures where test result is ignored due to rounding errors Checksums-Sha1: b9fd6c5b2aed9d0bff1186c26e1b4d9c27643f15 6918944 probabel-dbgsym_0.5.0+dfsg-3_s390x.deb a6c5abbb69042ec36dea2ed59b132187a8305b7e 7974 probabel_0.5.0+dfsg-3_s390x.buildinfo 4e3c9ef68ec20c2357392500f477fa26b1d38cd1 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6918944 probabel-dbgsym_0.5.0+dfsg-3_s390x.deb d182f0fbf3d5e7b57795e0592bf5d2a3 550876 probabel_0.5.0+dfsg-3_s390x.deb Checksums-Sha1: b9fd6c5b2aed9d0bff1186c26e1b4d9c27643f15 6918944 probabel-dbgsym_0.5.0+dfsg-3_s390x.deb 4e3c9ef68ec20c2357392500f477fa26b1d38cd1 550876 probabel_0.5.0+dfsg-3_s390x.deb Checksums-Sha256: cf5bfa097f8d5a41425659b4ef21c1aa97d4f9059a89c79b05c3ce9266ae2997 6918944 probabel-dbgsym_0.5.0+dfsg-3_s390x.deb dbc0dd6654542418ec4ceaa9998e36943266a4b18abf654082c57a86d38aea61 550876 probabel_0.5.0+dfsg-3_s390x.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sun, 01 Sep 2019 02:48:48 +0000 Build-Path: /<>/probabel-0.5.0+dfsg Installed-Build-Depends: autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.46), bash (= 5.0-4), binutils (= 2.32.51.20190821-2), binutils-common (= 2.32.51.20190821-2), binutils-x86-64-linux-gnu (= 2.32.51.20190821-2), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.34-0.1), build-essential (= 12.7), bzip2 (= 1.0.6-9.2), coreutils (= 8.30-3+b1), cpp (= 4:9.2.1-3), cpp-8 (= 8.3.0-21), cpp-9 (= 9.2.1-6), dash (= 0.5.10.2-6), debconf (= 1.5.73), debhelper (= 12.5.3), debianutils (= 4.8.6.3), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.5.0-1), diffutils (= 1:3.7-3), dpkg (= 1.19.7), dpkg-dev (= 1.19.7), dwz (= 0.13-1), fdisk (= 2.34-0.1), file (= 1:5.37-5), findutils (= 4.6.0+git+20190510-2), fontconfig-config (= 2.13.1-2), fonts-dejavu-core (= 2.37-1), fonts-lmodern (= 2.004.5-6), fonts-urw-base35 (= 20170801.1-2), g++ (= 4:9.2.1-3), g++-9 (= 9.2.1-6), gcc (= 4:9.2.1-3), gcc-8 (= 8.3.0-21), gcc-8-base (= 8.3.0-21), gcc-9 (= 9.2.1-6), gcc-9-base (= 9.2.1-6), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), grep (= 3.3-1), groff-base (= 1.22.4-3), gzip (= 1.9-3+b1), hostname (= 3.22+b1), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-4), libarchive-zip-perl (= 1.64-1), libasan5 (= 9.2.1-6), libatomic1 (= 9.2.1-6), libattr1 (= 1:2.4.48-4), libaudit-common (= 1:2.8.5-2), libaudit1 (= 1:2.8.5-2), libavahi-client3 (= 0.7-4+b1), libavahi-common-data (= 0.7-4+b1), libavahi-common3 (= 0.7-4+b1), libbinutils (= 2.32.51.20190821-2), libblkid1 (= 2.34-0.1), libbrotli1 (= 1.0.7-2), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.6-9.2), libc-bin (= 2.28-10), libc-dev-bin (= 2.28-10), libc6 (= 2.28-10), libc6-dev (= 2.28-10), libcairo2 (= 1.16.0-4), libcap-ng0 (= 0.7.9-2+b1), libcc1-0 (= 9.2.1-6), libcom-err2 (= 1.45.3-4), libcroco3 (= 0.6.13-1), libcups2 (= 2.2.12-2), libcupsimage2 (= 2.2.12-2), libdb5.3 (= 5.3.28+dfsg1-0.6), libdbus-1-3 (= 1.12.16-1), libdebconfclient0 (= 0.249), libdpkg-perl (= 1.19.7), libeigen3-dev (= 3.3.7-1), libelf1 (= 0.176-1.1), libexpat1 (= 2.2.7-1), libfdisk1 (= 2.34-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.5.0-1), libfontconfig1 (= 2.13.1-2+b1), libfreetype6 (= 2.9.1-4), libgcc-8-dev (= 8.3.0-21), libgcc-9-dev (= 9.2.1-6), libgcc1 (= 1:9.2.1-6), libgcrypt20 (= 1.8.5-2), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libglib2.0-0 (= 2.60.6-2), libgmp10 (= 2:6.1.2+dfsg-4), libgnutls30 (= 3.6.9-4), libgomp1 (= 9.2.1-6), libgpg-error0 (= 1.36-7), libgraphite2-3 (= 1.3.13-8), libgs9 (= 9.28~~rc1~dfsg-1), libgs9-common (= 9.28~~rc1~dfsg-1), libgssapi-krb5-2 (= 1.17-6), libharfbuzz-icu0 (= 2.6.1-2), libharfbuzz0b (= 2.6.1-2), libhogweed4 (= 3.5.1+really3.4.1-1), libice6 (= 2:1.0.9-2), libicu63 (= 63.2-2), libidn11 (= 1.33-2.2), libidn2-0 (= 2.2.0-1), libijs-0.35 (= 0.35-15), libisl19 (= 0.20-2), libitm1 (= 9.2.1-6), libjbig0 (= 2.1-3.1+b2), libjpeg62-turbo (= 1:1.5.2-2+b1), libk5crypto3 (= 1.17-6), libkeyutils1 (= 1.6-6), libkpathsea6 (= 2019.20190605.51237-2), libkrb5-3 (= 1.17-6), libkrb5support0 (= 1.17-6), liblcms2-2 (= 2.9-3+b1), liblsan0 (= 9.2.1-6), liblz4-1 (= 1.8.3-1+b1), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.37-5), libmagic1 (= 1:5.37-5), libmount1 (= 2.34-0.1), libmpc3 (= 1.1.0-1), libmpdec2 (= 2.4.2-2), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-21), libncurses6 (= 6.1+20190803-1), libncursesw6 (= 6.1+20190803-1), libnettle6 (= 3.5.1+really3.4.1-1), libopenjp2-7 (= 2.3.0-2), libp11-kit0 (= 0.23.16.1-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpaper-utils (= 1.1.28+b1), libpaper1 (= 1.1.28+b1), libpcre2-8-0 (= 10.32-5+b1), libpcre3 (= 2:8.39-12+b1), libperl5.28 (= 5.28.1-6), libpipeline1 (= 1.5.1-2), libpixman-1-0 (= 0.36.0-1), libpng16-16 (= 1.6.37-1), libpotrace0 (= 1.15-1+b1), libptexenc1 (= 2019.20190605.51237-2), libpython-stdlib (= 2.7.16-1), libpython2-stdlib (= 2.7.16-1), libpython2.7-minimal (= 2.7.16-3), libpython2.7-stdlib (= 2.7.16-3), libpython3-stdlib (= 3.7.3-1), libpython3.7-minimal (= 3.7.4-3), libpython3.7-stdlib (= 3.7.4-3), libquadmath0 (= 9.2.1-6), libreadline8 (= 8.0-3), libseccomp2 (= 2.4.1-2), libselinux1 (= 2.9-2+b2), libsigsegv2 (= 2.12-2), libsm6 (= 2:1.2.3-1), libsmartcols1 (= 2.34-0.1), libsqlite3-0 (= 3.29.0-2), libssl1.1 (= 1.1.1c-1), libstdc++-9-dev (= 9.2.1-6), libstdc++6 (= 9.2.1-6), libsub-override-perl (= 0.09-2), libsynctex2 (= 2019.20190605.51237-2), libsystemd0 (= 242-5), libtasn1-6 (= 4.14-2), libteckit0 (= 2.5.8+ds2-5), libtexlua53 (= 2019.20190605.51237-2), libtexluajit2 (= 2019.20190605.51237-2), libtiff5 (= 4.0.10+git190818-1), libtinfo6 (= 6.1+20190803-1), libtool (= 2.4.6-11), libtsan0 (= 9.2.1-6), libubsan1 (= 9.2.1-6), libuchardet0 (= 0.0.6-3), libudev1 (= 242-5), libunistring2 (= 0.9.10-2), libuuid1 (= 2.34-0.1), libwebp6 (= 0.6.1-2+b1), libwoff1 (= 1.0.2-1+b1), libx11-6 (= 2:1.6.7-1), libx11-data (= 2:1.6.7-1), libxau6 (= 1:1.0.8-1+b2), libxaw7 (= 2:1.0.13-1+b2), libxcb-render0 (= 1.13.1-2), libxcb-shm0 (= 1.13.1-2), libxcb1 (= 1.13.1-2), libxdmcp6 (= 1:1.1.2-3), libxext6 (= 2:1.3.3-1+b2), libxi6 (= 2:1.7.9-1), libxml2 (= 2.9.4+dfsg1-7+b3), libxmu6 (= 2:1.1.2-2+b3), libxpm4 (= 1:3.5.12-1), libxrender1 (= 1:0.9.10-1), libxt6 (= 1:1.1.5-1+b3), libxxhash0 (= 0.7.0-2), libzstd1 (= 1.4.3+dfsg-1), libzzip-0-13 (= 0.13.62-3.2), linux-libc-dev (= 5.2.9-2), login (= 1:4.7-2), lsb-base (= 11.1.0), m4 (= 1.4.18-2), make (= 4.2.1-1.2), man-db (= 2.8.7-3), mawk (= 1.3.3-17+b3), mime-support (= 3.63), ncurses-base (= 6.1+20190803-1), ncurses-bin (= 6.1+20190803-1), patch (= 2.7.6-6), perl (= 5.28.1-6), perl-base (= 5.28.1-6), perl-modules-5.28 (= 5.28.1-6), pkg-config (= 0.29-6), po-debconf (= 1.0.21), poppler-data (= 0.4.9-2), preview-latex-style (= 11.91-2), python (= 2.7.16-1), python-minimal (= 2.7.16-1), python2 (= 2.7.16-1), python2-minimal (= 2.7.16-1), python2.7 (= 2.7.16-3), python2.7-minimal (= 2.7.16-3), python3 (= 3.7.3-1), python3-minimal (= 3.7.3-1), python3.7 (= 3.7.4-3), python3.7-minimal (= 3.7.4-3), readline-common (= 8.0-3), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.96~beta-1), t1utils (= 1.41-3), tar (= 1.30+dfsg-6+b1), tex-common (= 6.12), texlive-base (= 2019.20190830-1), texlive-binaries (= 2019.20190605.51237-2), texlive-fonts-recommended (= 2019.20190830-1), texlive-latex-base (= 2019.20190830-1), texlive-latex-extra (= 2019.20190830-1), texlive-latex-recommended (= 2019.20190830-1), texlive-pictures (= 2019.20190830-1), ucf (= 3.0038+nmu1), util-linux (= 2.34-0.1), x11-common (= 1:7.7+19), xdg-utils (= 1.1.3-1), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-1+b1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="POSIX" SOURCE_DATE_EPOCH="1549271506" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ probabel-dbgsym_0.5.0+dfsg-3_s390x.deb -------------------------------------- new Debian package, version 2.0. size 6918944 bytes: control archive=692 bytes. 467 bytes, 12 lines control 402 bytes, 4 lines md5sums Package: probabel-dbgsym Source: probabel Version: 0.5.0+dfsg-3 Auto-Built-Package: debug-symbols Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 7185 Depends: probabel (= 0.5.0+dfsg-3) Section: debug Priority: optional Description: debug symbols for probabel Build-Ids: 43a409a0472748173221227db383c9e23d43e996 d8bae3012d42103c68994c20c130103e2993d311 dacc7b6828077d7b47f847f9f7840e74ed5ffdf0 drwxr-xr-x root/root 0 2019-02-04 09:11 ./ drwxr-xr-x root/root 0 2019-02-04 09:11 ./usr/ drwxr-xr-x root/root 0 2019-02-04 09:11 ./usr/lib/ drwxr-xr-x root/root 0 2019-02-04 09:11 ./usr/lib/debug/ drwxr-xr-x root/root 0 2019-02-04 09:11 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2019-02-04 09:11 ./usr/lib/debug/.build-id/43/ -rw-r--r-- root/root 1753216 2019-02-04 09:11 ./usr/lib/debug/.build-id/43/a409a0472748173221227db383c9e23d43e996.debug drwxr-xr-x root/root 0 2019-02-04 09:11 ./usr/lib/debug/.build-id/d8/ -rw-r--r-- root/root 2105624 2019-02-04 09:11 ./usr/lib/debug/.build-id/d8/bae3012d42103c68994c20c130103e2993d311.debug drwxr-xr-x root/root 0 2019-02-04 09:11 ./usr/lib/debug/.build-id/da/ -rw-r--r-- root/root 1753136 2019-02-04 09:11 ./usr/lib/debug/.build-id/da/cc7b6828077d7b47f847f9f7840e74ed5ffdf0.debug drwxr-xr-x root/root 0 2019-02-04 09:11 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2019-02-04 09:11 ./usr/lib/debug/.dwz/s390x-linux-gnu/ -rw-r--r-- root/root 1727856 2019-02-04 09:11 ./usr/lib/debug/.dwz/s390x-linux-gnu/probabel.debug drwxr-xr-x root/root 0 2019-02-04 09:11 ./usr/share/ drwxr-xr-x root/root 0 2019-02-04 09:11 ./usr/share/doc/ lrwxrwxrwx root/root 0 2019-02-04 09:11 ./usr/share/doc/probabel-dbgsym -> probabel probabel_0.5.0+dfsg-3_s390x.deb ------------------------------- new Debian package, version 2.0. size 550876 bytes: control archive=1416 bytes. 25 bytes, 1 lines conffiles 608 bytes, 14 lines control 1725 bytes, 25 lines md5sums Package: probabel Version: 0.5.0+dfsg-3 Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 1749 Depends: libc6 (>= 2.4), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2) Recommends: perl:any Section: science Priority: optional Homepage: http://www.genabel.org Description: Toolset for Genome-Wide Association Analysis The ProbABEL package is part of the GenABEL project for analysis of genome-wide data. ProbABEL is used to run GWAS. Using files in filevector/DatABEL format even allows for running GWAS on computers with only a few GB of RAM. drwxr-xr-x root/root 0 2019-02-04 09:11 ./ drwxr-xr-x root/root 0 2019-02-04 09:11 ./etc/ -rw-r--r-- root/root 1606 2019-02-04 09:11 ./etc/probabel_config.cfg drwxr-xr-x root/root 0 2019-02-04 09:11 ./usr/ drwxr-xr-x root/root 0 2019-02-04 09:11 ./usr/bin/ -rwxr-xr-x root/root 478136 2019-02-04 09:11 ./usr/bin/pacoxph -rwxr-xr-x root/root 445368 2019-02-04 09:11 ./usr/bin/palinear -rwxr-xr-x root/root 445368 2019-02-04 09:11 ./usr/bin/palogist -rwxr-xr-x root/root 12314 2019-02-04 09:11 ./usr/bin/probabel lrwxrwxrwx root/root 0 2019-02-04 09:11 ./usr/bin/probabel.pl -> probabel drwxr-xr-x root/root 0 2019-02-04 09:11 ./usr/share/ drwxr-xr-x root/root 0 2019-02-04 09:11 ./usr/share/doc-base/ -rw-r--r-- root/root 306 2019-02-04 09:11 ./usr/share/doc-base/probabel-manual drwxr-xr-x root/root 0 2019-02-04 09:11 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-02-04 09:11 ./usr/share/doc/probabel/ -rw-r--r-- root/root 336266 2019-02-04 09:11 ./usr/share/doc/probabel/ProbABEL_manual.pdf.gz -rw-r--r-- root/root 17451 2019-02-04 09:11 ./usr/share/doc/probabel/ProbABEL_manual.tex.gz -rw-r--r-- root/root 373 2019-02-04 09:11 ./usr/share/doc/probabel/QuickStart.txt -rw-r--r-- root/root 86 2019-02-04 09:11 ./usr/share/doc/probabel/TODO -rw-r--r-- root/root 1519 2019-02-04 09:11 ./usr/share/doc/probabel/changelog.Debian.gz -rw-r--r-- root/root 8489 2016-05-04 20:48 ./usr/share/doc/probabel/changelog.gz -rw-r--r-- root/root 3826 2019-02-04 09:11 ./usr/share/doc/probabel/copyright -rw-r--r-- root/root 527 2019-02-04 09:11 ./usr/share/doc/probabel/short_coxph_data.txt -rw-r--r-- root/root 465 2019-02-04 09:11 ./usr/share/doc/probabel/short_height.txt -rw-r--r-- root/root 308 2019-02-04 09:11 ./usr/share/doc/probabel/short_height_base_add.out.txt.save -rw-r--r-- root/root 508 2019-02-04 09:11 ./usr/share/doc/probabel/short_logist_data.txt -rw-r--r-- root/root 498 2019-02-04 09:11 ./usr/share/doc/probabel/short_test.mldose -rw-r--r-- root/root 121 2019-02-04 09:11 ./usr/share/doc/probabel/test.map -rw-r--r-- root/root 244 2019-02-04 09:11 ./usr/share/doc/probabel/test.mlinfo -rw-r--r-- root/root 1451 2019-02-04 09:11 ./usr/share/doc/probabel/test_regression.R drwxr-xr-x root/root 0 2019-02-04 09:11 ./usr/share/man/ drwxr-xr-x root/root 0 2019-02-04 09:11 ./usr/share/man/man1/ -rw-r--r-- root/root 1220 2019-02-04 09:11 ./usr/share/man/man1/pacoxph.1.gz -rw-r--r-- root/root 1325 2019-02-04 09:11 ./usr/share/man/man1/palinear.1.gz -rw-r--r-- root/root 1366 2019-02-04 09:11 ./usr/share/man/man1/palogist.1.gz -rw-r--r-- root/root 1391 2019-02-04 09:11 ./usr/share/man/man1/probabel.1.gz -rw-r--r-- root/root 1391 2019-02-04 09:11 ./usr/share/man/man1/probabel.pl.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 301548 Build-Time: 239 Distribution: unstable Foreign Architectures: s390x Host Architecture: s390x Install-Time: 58 Job: probabel_0.5.0+dfsg-3 Lintian: pass Machine Architecture: amd64 Package: probabel Package-Time: 310 Source-Version: 0.5.0+dfsg-3 Space: 301548 Status: successful Version: 0.5.0+dfsg-3 -------------------------------------------------------------------------------- Finished at 2019-09-01T02:48:48Z Build needed 00:05:10, 301548k disk space