sbuild (Debian sbuild) 0.78.1 (09 February 2019) on mjolnir +==============================================================================+ | probabel 0.5.0+dfsg-5 (amd64) Fri, 21 Jan 2022 10:11:01 +0000 | +==============================================================================+ Package: probabel Version: 0.5.0+dfsg-5 Source Version: 0.5.0+dfsg-5 Distribution: unstable Machine Architecture: arm64 Host Architecture: amd64 Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/crossqa-sid-675a1bbe-02cc-40f8-afde-e6b542a806a8' with '<>' I: NOTICE: Log filtering will replace 'build/probabel-A29hoy/resolver-KoXlIk' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://mirror.einval.org/debian sid InRelease [165 kB] Ign:2 http://mirror.einval.org/debian sid/main Sources.diff/Index Ign:3 http://mirror.einval.org/debian sid/main arm64 Packages.diff/Index Get:2 http://mirror.einval.org/debian sid/main Sources.diff/Index [63.6 kB] Ign:2 http://mirror.einval.org/debian sid/main Sources.diff/Index Ign:3 http://mirror.einval.org/debian sid/main arm64 Packages.diff/Index Get:4 http://mirror.einval.org/debian sid/main amd64 Packages [8886 kB] Get:5 http://mirror.einval.org/debian sid/main Sources [9449 kB] Get:6 http://mirror.einval.org/debian sid/main arm64 Packages [8748 kB] Fetched 27.2 MB in 7s (3776 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'probabel' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/probabel.git Please use: git clone https://salsa.debian.org/med-team/probabel.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1785 kB of source archives. Get:1 http://mirror.einval.org/debian sid/main probabel 0.5.0+dfsg-5 (dsc) [2286 B] Get:2 http://mirror.einval.org/debian sid/main probabel 0.5.0+dfsg-5 (tar) [1774 kB] Get:3 http://mirror.einval.org/debian sid/main probabel 0.5.0+dfsg-5 (diff) [7892 B] Fetched 1785 kB in 0s (20.2 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/probabel-A29hoy/probabel-0.5.0+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/probabel-A29hoy' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), libeigen3-dev, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-recommended, debhelper, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-amd64:arm64, libc-dev:amd64, libstdc++-dev:amd64 Filtered Build-Depends: debhelper-compat (= 13), libeigen3-dev, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-recommended, debhelper, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-amd64:arm64, libc-dev:amd64, libstdc++-dev:amd64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [466 B] Get:5 copy:/<>/apt_archive ./ Packages [536 B] Fetched 1959 B in 0s (47.5 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-x86-64-linux-gnu bsdextrautils cpp-11-x86-64-linux-gnu cpp-x86-64-linux-gnu cross-config crossbuild-essential-amd64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file fontconfig-config fonts-dejavu-core fonts-lmodern g++-11-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-11-base:amd64 gcc-11-cross-base gcc-11-x86-64-linux-gnu gcc-11-x86-64-linux-gnu-base gcc-x86-64-linux-gnu gettext gettext-base groff-base intltool-debian libapache-pom-java libarchive-zip-perl libasan6:amd64 libasan6-amd64-cross libatomic1:amd64 libatomic1-amd64-cross libbrotli1 libbsd0 libc6:amd64 libc6-amd64-cross libc6-dev:amd64 libc6-dev-amd64-cross libcairo2 libcom-err2:amd64 libcommons-logging-java libcommons-parent-java libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:amd64 libcrypt1:amd64 libdebhelper-perl libdebian-dpkgcross-perl libeigen3-dev libelf1 libexpat1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfontbox-java libfontconfig1 libfreetype6 libgcc-11-dev:amd64 libgcc-11-dev-amd64-cross libgcc-s1:amd64 libgcc-s1-amd64-cross libglib2.0-0 libgomp1:amd64 libgomp1-amd64-cross libgraphite2-3 libgssapi-krb5-2:amd64 libharfbuzz0b libice6 libicu67 libio-string-perl libitm1:amd64 libitm1-amd64-cross libk5crypto3:amd64 libkeyutils1:amd64 libkpathsea6 libkrb5-3:amd64 libkrb5support0:amd64 liblocale-gettext-perl liblsan0:amd64 liblsan0-amd64-cross libmagic-mgc libmagic1 libmd0 libmpdec3 libncursesw6 libnsl-dev:amd64 libnsl2:amd64 libpaper-utils libpaper1 libpdfbox-java libpipeline1 libpixman-1-0 libpng16-16 libptexenc1 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libquadmath0:amd64 libquadmath0-amd64-cross libreadline8 libsigsegv2 libsm6 libsqlite3-0 libssl1.1:amd64 libstdc++-11-dev:amd64 libstdc++-11-dev-amd64-cross libstdc++6:amd64 libstdc++6-amd64-cross libsub-override-perl libsynctex2 libteckit0 libtexlua53 libtirpc-dev:amd64 libtirpc3:amd64 libtool libtsan0:amd64 libtsan0-amd64-cross libubsan1:amd64 libubsan1-amd64-cross libuchardet0 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxmu6 libxpm4 libxrender1 libxt6 libyaml-perl libzzip-0-13 linux-libc-dev:amd64 linux-libc-dev-amd64-cross m4 man-db media-types pkg-config po-debconf preview-latex-style python3 python3-minimal python3.9 python3.9-minimal readline-common sensible-utils t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures ucf x11-common xdg-utils Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-11-locales cpp-doc dh-make binutils-multiarch g++-11-multilib-x86-64-linux-gnu gcc-11-doc gcc-11-multilib-x86-64-linux-gnu manpages-dev flex bison gdb-x86-64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:amd64 libc-l10n:amd64 locales:amd64 libnss-nis:amd64 libnss-nisplus:amd64 manpages-dev:amd64 libavalon-framework-java libcommons-logging-java-doc libexcalibur-logkit-java liblog4j1.2-java libeigen3-doc libmpfrc++-dev krb5-doc:amd64 krb5-user:amd64 libstdc++-11-doc:amd64 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python3.9-venv python3.9-doc binfmt-support readline-doc ghostscript gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec texlive-fonts-recommended-doc texlive-latex-base-doc python3-pygments icc-profiles libspreadsheet-parseexcel-perl texlive-latex-extra-doc texlive-latex-recommended-doc texlive-luatex texlive-pstricks dot2tex prerex texlive-pictures-doc vprerex Recommended packages: curl | wget | lynx libidn2-0:amd64 libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales:amd64 libgpm2 ca-certificates libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl lmodern dvisvgm tex-gyre tipa texlive-plain-generic ruby tk libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-x86-64-linux-gnu bsdextrautils cpp-11-x86-64-linux-gnu cpp-x86-64-linux-gnu cross-config crossbuild-essential-amd64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file fontconfig-config fonts-dejavu-core fonts-lmodern g++-11-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-11-base:amd64 gcc-11-cross-base gcc-11-x86-64-linux-gnu gcc-11-x86-64-linux-gnu-base gcc-x86-64-linux-gnu gettext gettext-base groff-base intltool-debian libapache-pom-java libarchive-zip-perl libasan6:amd64 libasan6-amd64-cross libatomic1:amd64 libatomic1-amd64-cross libbrotli1 libbsd0 libc6:amd64 libc6-amd64-cross libc6-dev:amd64 libc6-dev-amd64-cross libcairo2 libcom-err2:amd64 libcommons-logging-java libcommons-parent-java libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:amd64 libcrypt1:amd64 libdebhelper-perl libdebian-dpkgcross-perl libeigen3-dev libelf1 libexpat1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfontbox-java libfontconfig1 libfreetype6 libgcc-11-dev:amd64 libgcc-11-dev-amd64-cross libgcc-s1:amd64 libgcc-s1-amd64-cross libglib2.0-0 libgomp1:amd64 libgomp1-amd64-cross libgraphite2-3 libgssapi-krb5-2:amd64 libharfbuzz0b libice6 libicu67 libio-string-perl libitm1:amd64 libitm1-amd64-cross libk5crypto3:amd64 libkeyutils1:amd64 libkpathsea6 libkrb5-3:amd64 libkrb5support0:amd64 liblocale-gettext-perl liblsan0:amd64 liblsan0-amd64-cross libmagic-mgc libmagic1 libmd0 libmpdec3 libncursesw6 libnsl-dev:amd64 libnsl2:amd64 libpaper-utils libpaper1 libpdfbox-java libpipeline1 libpixman-1-0 libpng16-16 libptexenc1 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libquadmath0:amd64 libquadmath0-amd64-cross libreadline8 libsigsegv2 libsm6 libsqlite3-0 libssl1.1:amd64 libstdc++-11-dev:amd64 libstdc++-11-dev-amd64-cross libstdc++6:amd64 libstdc++6-amd64-cross libsub-override-perl libsynctex2 libteckit0 libtexlua53 libtirpc-dev:amd64 libtirpc3:amd64 libtool libtsan0:amd64 libtsan0-amd64-cross libubsan1:amd64 libubsan1-amd64-cross libuchardet0 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxmu6 libxpm4 libxrender1 libxt6 libyaml-perl libzzip-0-13 linux-libc-dev:amd64 linux-libc-dev-amd64-cross m4 man-db media-types pkg-config po-debconf preview-latex-style python3 python3-minimal python3.9 python3.9-minimal readline-common sbuild-build-depends-main-dummy:amd64 sensible-utils t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures ucf x11-common xdg-utils 0 upgraded, 173 newly installed, 0 to remove and 0 not upgraded. Need to get 314 MB of archives. After this operation, 1125 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [964 B] Get:2 http://mirror.einval.org/debian sid/main arm64 liblocale-gettext-perl arm64 1.07-4+b1 [18.9 kB] Get:3 http://mirror.einval.org/debian sid/main arm64 libpython3.9-minimal arm64 3.9.10-1 [800 kB] Get:4 http://mirror.einval.org/debian sid/main arm64 libexpat1 arm64 2.4.3-1 [91.2 kB] Get:5 http://mirror.einval.org/debian sid/main arm64 python3.9-minimal arm64 3.9.10-1 [1850 kB] Get:6 http://mirror.einval.org/debian sid/main arm64 python3-minimal arm64 3.9.8-1 [38.5 kB] Get:7 http://mirror.einval.org/debian sid/main arm64 media-types all 4.0.0 [30.3 kB] Get:8 http://mirror.einval.org/debian sid/main arm64 libmpdec3 arm64 2.5.1-2 [84.4 kB] Get:9 http://mirror.einval.org/debian sid/main arm64 libncursesw6 arm64 6.3-2 [120 kB] Get:10 http://mirror.einval.org/debian sid/main arm64 readline-common all 8.1.2-1 [73.8 kB] Get:11 http://mirror.einval.org/debian sid/main arm64 libreadline8 arm64 8.1.2-1 [160 kB] Get:12 http://mirror.einval.org/debian sid/main arm64 libsqlite3-0 arm64 3.37.2-2 [771 kB] Get:13 http://mirror.einval.org/debian sid/main arm64 libpython3.9-stdlib arm64 3.9.10-1 [1659 kB] Get:14 http://mirror.einval.org/debian sid/main arm64 python3.9 arm64 3.9.10-1 [487 kB] Get:15 http://mirror.einval.org/debian sid/main arm64 libpython3-stdlib arm64 3.9.8-1 [21.6 kB] Get:16 http://mirror.einval.org/debian sid/main arm64 python3 arm64 3.9.8-1 [38.1 kB] Get:17 http://mirror.einval.org/debian sid/main arm64 sensible-utils all 0.0.17 [21.5 kB] Get:18 http://mirror.einval.org/debian sid/main arm64 ucf all 3.0043 [74.0 kB] Get:19 http://mirror.einval.org/debian sid/main arm64 tex-common all 6.17 [53.6 kB] Get:20 http://mirror.einval.org/debian sid/main arm64 libmagic-mgc arm64 1:5.41-2 [295 kB] Get:21 http://mirror.einval.org/debian sid/main arm64 libmagic1 arm64 1:5.41-2 [124 kB] Get:22 http://mirror.einval.org/debian sid/main arm64 file arm64 1:5.41-2 [66.8 kB] Get:23 http://mirror.einval.org/debian sid/main arm64 gettext-base arm64 0.21-4 [173 kB] Get:24 http://mirror.einval.org/debian sid/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get:25 http://mirror.einval.org/debian sid/main arm64 groff-base arm64 1.22.4-8 [882 kB] Get:26 http://mirror.einval.org/debian sid/main arm64 bsdextrautils arm64 2.37.2-6 [144 kB] Get:27 http://mirror.einval.org/debian sid/main arm64 libpipeline1 arm64 1.5.5-1 [35.8 kB] Get:28 http://mirror.einval.org/debian sid/main arm64 man-db arm64 2.9.4-4 [1336 kB] Get:29 http://mirror.einval.org/debian sid/main arm64 libsigsegv2 arm64 2.13-1 [34.7 kB] Get:30 http://mirror.einval.org/debian sid/main arm64 m4 arm64 1.4.18-5 [199 kB] Get:31 http://mirror.einval.org/debian sid/main arm64 autoconf all 2.71-2 [343 kB] Get:32 http://mirror.einval.org/debian sid/main arm64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get:33 http://mirror.einval.org/debian sid/main arm64 automake all 1:1.16.5-1.1 [823 kB] Get:34 http://mirror.einval.org/debian sid/main arm64 autopoint all 0.21-4 [510 kB] Get:35 http://mirror.einval.org/debian sid/main arm64 gcc-11-x86-64-linux-gnu-base arm64 11.2.0-9cross1 [205 kB] Get:36 http://mirror.einval.org/debian sid/main arm64 cpp-11-x86-64-linux-gnu arm64 11.2.0-9cross1 [48.2 MB] Get:37 http://mirror.einval.org/debian sid/main arm64 cpp-x86-64-linux-gnu arm64 4:11.2.0-2 [17.0 kB] Get:38 http://mirror.einval.org/debian sid/main arm64 cross-config all 2.6.18+nmu2 [31.7 kB] Get:39 http://mirror.einval.org/debian sid/main arm64 binutils-x86-64-linux-gnu arm64 2.37.50.20220106-2 [2322 kB] Get:40 http://mirror.einval.org/debian sid/main arm64 gcc-11-cross-base all 11.2.0-9cross1 [201 kB] Get:41 http://mirror.einval.org/debian sid/main arm64 libgcc-s1-amd64-cross all 11.2.0-9cross1 [42.0 kB] Get:42 http://mirror.einval.org/debian sid/main arm64 libgomp1-amd64-cross all 11.2.0-9cross1 [104 kB] Get:43 http://mirror.einval.org/debian sid/main arm64 libitm1-amd64-cross all 11.2.0-9cross1 [25.5 kB] Get:44 http://mirror.einval.org/debian sid/main arm64 libatomic1-amd64-cross all 11.2.0-9cross1 [8764 B] Get:45 http://mirror.einval.org/debian sid/main arm64 libasan6-amd64-cross all 11.2.0-9cross1 [2044 kB] Get:46 http://mirror.einval.org/debian sid/main arm64 liblsan0-amd64-cross all 11.2.0-9cross1 [885 kB] Get:47 http://mirror.einval.org/debian sid/main arm64 libtsan0-amd64-cross all 11.2.0-9cross1 [2010 kB] Get:48 http://mirror.einval.org/debian sid/main arm64 libc6-amd64-cross all 2.33-1cross1 [1579 kB] Get:49 http://mirror.einval.org/debian sid/main arm64 libstdc++6-amd64-cross all 11.2.0-9cross1 [535 kB] Get:50 http://mirror.einval.org/debian sid/main arm64 libubsan1-amd64-cross all 11.2.0-9cross1 [834 kB] Get:51 http://mirror.einval.org/debian sid/main arm64 libquadmath0-amd64-cross all 11.2.0-9cross1 [145 kB] Get:52 http://mirror.einval.org/debian sid/main arm64 libgcc-11-dev-amd64-cross all 11.2.0-9cross1 [2357 kB] Get:53 http://mirror.einval.org/debian sid/main arm64 gcc-11-x86-64-linux-gnu arm64 11.2.0-9cross1 [54.7 MB] Get:54 http://mirror.einval.org/debian sid/main arm64 gcc-x86-64-linux-gnu arm64 4:11.2.0-2 [1460 B] Get:55 http://mirror.einval.org/debian sid/main arm64 linux-libc-dev-amd64-cross all 5.15.5-1cross1 [1576 kB] Get:56 http://mirror.einval.org/debian sid/main arm64 libc6-dev-amd64-cross all 2.33-1cross1 [2272 kB] Get:57 http://mirror.einval.org/debian sid/main arm64 libstdc++-11-dev-amd64-cross all 11.2.0-9cross1 [1952 kB] Get:58 http://mirror.einval.org/debian sid/main arm64 g++-11-x86-64-linux-gnu arm64 11.2.0-9cross1 [52.2 MB] Get:59 http://mirror.einval.org/debian sid/main arm64 g++-x86-64-linux-gnu arm64 4:11.2.0-2 [1176 B] Get:60 http://mirror.einval.org/debian sid/main arm64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:61 http://mirror.einval.org/debian sid/main arm64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:62 http://mirror.einval.org/debian sid/main arm64 libicu67 arm64 67.1-7 [8467 kB] Get:63 http://mirror.einval.org/debian sid/main arm64 libxml2 arm64 2.9.12+dfsg-5+b1 [633 kB] Get:64 http://mirror.einval.org/debian sid/main arm64 libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get:65 http://mirror.einval.org/debian sid/main arm64 libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get:66 http://mirror.einval.org/debian sid/main arm64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:67 http://mirror.einval.org/debian sid/main arm64 libxml-libxml-perl arm64 2.0207+dfsg-2 [328 kB] Get:68 http://mirror.einval.org/debian sid/main arm64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:69 http://mirror.einval.org/debian sid/main arm64 libyaml-perl all 1.30-1 [67.7 kB] Get:70 http://mirror.einval.org/debian sid/main arm64 libconfig-auto-perl all 0.44-1.1 [19.0 kB] Get:71 http://mirror.einval.org/debian sid/main arm64 libfile-which-perl all 1.23-1 [16.6 kB] Get:72 http://mirror.einval.org/debian sid/main arm64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:73 http://mirror.einval.org/debian sid/main arm64 libdebian-dpkgcross-perl all 2.6.18+nmu2 [30.6 kB] Get:74 http://mirror.einval.org/debian sid/main arm64 dpkg-cross all 2.6.18+nmu2 [40.9 kB] Get:75 http://mirror.einval.org/debian sid/main arm64 crossbuild-essential-amd64 all 12.9 [6708 B] Get:76 http://mirror.einval.org/debian sid/main arm64 libdebhelper-perl all 13.6 [193 kB] Get:77 http://mirror.einval.org/debian sid/main arm64 libtool all 2.4.6-15 [513 kB] Get:78 http://mirror.einval.org/debian sid/main arm64 dh-autoreconf all 20 [17.1 kB] Get:79 http://mirror.einval.org/debian sid/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get:80 http://mirror.einval.org/debian sid/main arm64 libsub-override-perl all 0.09-2 [10.2 kB] Get:81 http://mirror.einval.org/debian sid/main arm64 libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB] Get:82 http://mirror.einval.org/debian sid/main arm64 dh-strip-nondeterminism all 1.13.0-1 [15.8 kB] Get:83 http://mirror.einval.org/debian sid/main arm64 libelf1 arm64 0.186-1 [177 kB] Get:84 http://mirror.einval.org/debian sid/main arm64 dwz arm64 0.14-1 [90.0 kB] Get:85 http://mirror.einval.org/debian sid/main arm64 gettext arm64 0.21-4 [1261 kB] Get:86 http://mirror.einval.org/debian sid/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:87 http://mirror.einval.org/debian sid/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get:88 http://mirror.einval.org/debian sid/main arm64 debhelper all 13.6 [1054 kB] Get:89 http://mirror.einval.org/debian sid/main arm64 fonts-dejavu-core all 2.37-2 [1069 kB] Get:90 http://mirror.einval.org/debian sid/main arm64 fontconfig-config all 2.13.1-4.2 [281 kB] Get:91 http://mirror.einval.org/debian sid/main arm64 fonts-lmodern all 2.004.5-6.1 [4540 kB] Get:92 http://mirror.einval.org/debian sid/main amd64 gcc-11-base amd64 11.2.0-14 [207 kB] Get:93 http://mirror.einval.org/debian sid/main arm64 libapache-pom-java all 18-1 [4676 B] Get:94 http://mirror.einval.org/debian sid/main amd64 libgcc-s1 amd64 11.2.0-14 [42.0 kB] Get:95 http://mirror.einval.org/debian sid/main amd64 libc6 amd64 2.33-3 [2831 kB] Get:96 http://mirror.einval.org/debian sid/main amd64 libasan6 amd64 11.2.0-14 [2050 kB] Get:97 http://mirror.einval.org/debian sid/main amd64 libatomic1 amd64 11.2.0-14 [9044 B] Get:98 http://mirror.einval.org/debian sid/main arm64 libbrotli1 arm64 1.0.9-2+b3 [270 kB] Get:99 http://mirror.einval.org/debian sid/main arm64 libmd0 arm64 1.0.4-1 [29.5 kB] Get:100 http://mirror.einval.org/debian sid/main arm64 libbsd0 arm64 0.11.3-1 [106 kB] Get:101 http://mirror.einval.org/debian sid/main amd64 linux-libc-dev amd64 5.15.15-1 [1478 kB] Get:102 http://mirror.einval.org/debian sid/main amd64 libcrypt1 amd64 1:4.4.27-1.1 [89.0 kB] Get:103 http://mirror.einval.org/debian sid/main amd64 libcrypt-dev amd64 1:4.4.27-1.1 [118 kB] Get:104 http://mirror.einval.org/debian sid/main amd64 libcom-err2 amd64 1.46.5-2 [75.7 kB] Get:105 http://mirror.einval.org/debian sid/main amd64 libkrb5support0 amd64 1.18.3-7 [65.4 kB] Get:106 http://mirror.einval.org/debian sid/main amd64 libk5crypto3 amd64 1.18.3-7 [113 kB] Get:107 http://mirror.einval.org/debian sid/main amd64 libkeyutils1 amd64 1.6.1-2 [15.4 kB] Get:108 http://mirror.einval.org/debian sid/main amd64 libssl1.1 amd64 1.1.1m-1 [1557 kB] Get:109 http://mirror.einval.org/debian sid/main amd64 libkrb5-3 amd64 1.18.3-7 [363 kB] Get:110 http://mirror.einval.org/debian sid/main amd64 libgssapi-krb5-2 amd64 1.18.3-7 [165 kB] Get:111 http://mirror.einval.org/debian sid/main amd64 libtirpc3 amd64 1.3.2-2 [83.9 kB] Get:112 http://mirror.einval.org/debian sid/main amd64 libnsl2 amd64 1.3.0-2 [39.5 kB] Get:113 http://mirror.einval.org/debian sid/main amd64 libtirpc-dev amd64 1.3.2-2 [190 kB] Get:114 http://mirror.einval.org/debian sid/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:115 http://mirror.einval.org/debian sid/main amd64 libc6-dev amd64 2.33-3 [2276 kB] Get:116 http://mirror.einval.org/debian sid/main arm64 libpng16-16 arm64 1.6.37-3 [289 kB] Get:117 http://mirror.einval.org/debian sid/main arm64 libfreetype6 arm64 2.11.1+dfsg-1 [374 kB] Get:118 http://mirror.einval.org/debian sid/main arm64 libfontconfig1 arm64 2.13.1-4.2 [344 kB] Get:119 http://mirror.einval.org/debian sid/main arm64 libpixman-1-0 arm64 0.40.0-1 [444 kB] Get:120 http://mirror.einval.org/debian sid/main arm64 libxau6 arm64 1:1.0.9-1 [19.7 kB] Get:121 http://mirror.einval.org/debian sid/main arm64 libxdmcp6 arm64 1:1.1.2-3 [25.4 kB] Get:122 http://mirror.einval.org/debian sid/main arm64 libxcb1 arm64 1.14-3 [138 kB] Get:123 http://mirror.einval.org/debian sid/main arm64 libx11-data all 2:1.7.2-2 [311 kB] Get:124 http://mirror.einval.org/debian sid/main arm64 libx11-6 arm64 2:1.7.2-2+b1 [751 kB] Get:125 http://mirror.einval.org/debian sid/main arm64 libxcb-render0 arm64 1.14-3 [111 kB] Get:126 http://mirror.einval.org/debian sid/main arm64 libxcb-shm0 arm64 1.14-3 [101 kB] Get:127 http://mirror.einval.org/debian sid/main arm64 libxext6 arm64 2:1.3.4-1 [51.6 kB] Get:128 http://mirror.einval.org/debian sid/main arm64 libxrender1 arm64 1:0.9.10-1 [30.4 kB] Get:129 http://mirror.einval.org/debian sid/main arm64 libcairo2 arm64 1.16.0-5 [648 kB] Get:130 http://mirror.einval.org/debian sid/main arm64 libcommons-parent-java all 43-1 [10.8 kB] Get:131 http://mirror.einval.org/debian sid/main arm64 libcommons-logging-java all 1.2-2 [62.2 kB] Get:132 http://mirror.einval.org/debian sid/main arm64 libglib2.0-0 arm64 2.70.2-1 [1313 kB] Get:133 http://mirror.einval.org/debian sid/main arm64 pkg-config arm64 0.29.2-1 [63.6 kB] Get:134 http://mirror.einval.org/debian sid/main arm64 libeigen3-dev all 3.4.0-2 [1040 kB] Get:135 http://mirror.einval.org/debian sid/main arm64 libfontbox-java all 1:1.8.16-2 [211 kB] Get:136 http://mirror.einval.org/debian sid/main amd64 libgomp1 amd64 11.2.0-14 [106 kB] Get:137 http://mirror.einval.org/debian sid/main amd64 libitm1 amd64 11.2.0-14 [26.1 kB] Get:138 http://mirror.einval.org/debian sid/main amd64 liblsan0 amd64 11.2.0-14 [886 kB] Get:139 http://mirror.einval.org/debian sid/main amd64 libtsan0 amd64 11.2.0-14 [2016 kB] Get:140 http://mirror.einval.org/debian sid/main amd64 libstdc++6 amd64 11.2.0-14 [577 kB] Get:141 http://mirror.einval.org/debian sid/main amd64 libubsan1 amd64 11.2.0-14 [835 kB] Get:142 http://mirror.einval.org/debian sid/main amd64 libquadmath0 amd64 11.2.0-14 [144 kB] Get:143 http://mirror.einval.org/debian sid/main amd64 libgcc-11-dev amd64 11.2.0-14 [2356 kB] Get:144 http://mirror.einval.org/debian sid/main arm64 libgraphite2-3 arm64 1.3.14-1 [75.6 kB] Get:145 http://mirror.einval.org/debian sid/main arm64 libharfbuzz0b arm64 2.7.4-1 [1445 kB] Get:146 http://mirror.einval.org/debian sid/main arm64 x11-common all 1:7.7+23 [252 kB] Get:147 http://mirror.einval.org/debian sid/main arm64 libice6 arm64 2:1.0.10-1 [55.6 kB] Get:148 http://mirror.einval.org/debian sid/main arm64 libkpathsea6 arm64 2021.20210626.59705-1 [171 kB] Get:149 http://mirror.einval.org/debian sid/main arm64 libpaper1 arm64 1.1.28+b1 [21.4 kB] Get:150 http://mirror.einval.org/debian sid/main arm64 libpaper-utils arm64 1.1.28+b1 [18.3 kB] Get:151 http://mirror.einval.org/debian sid/main arm64 libpdfbox-java all 1:1.8.16-2 [5205 kB] Get:152 http://mirror.einval.org/debian sid/main arm64 libptexenc1 arm64 2021.20210626.59705-1 [64.0 kB] Get:153 http://mirror.einval.org/debian sid/main arm64 libsm6 arm64 2:1.2.3-1 [34.0 kB] Get:154 http://mirror.einval.org/debian sid/main amd64 libstdc++-11-dev amd64 11.2.0-14 [1979 kB] Get:155 http://mirror.einval.org/debian sid/main arm64 libsynctex2 arm64 2021.20210626.59705-1 [77.6 kB] Get:156 http://mirror.einval.org/debian sid/main arm64 libteckit0 arm64 2.5.11+ds1-1 [299 kB] Get:157 http://mirror.einval.org/debian sid/main arm64 libtexlua53 arm64 2021.20210626.59705-1 [124 kB] Get:158 http://mirror.einval.org/debian sid/main arm64 libxt6 arm64 1:1.2.0-1 [176 kB] Get:159 http://mirror.einval.org/debian sid/main arm64 libxmu6 arm64 2:1.1.2-2+b3 [57.8 kB] Get:160 http://mirror.einval.org/debian sid/main arm64 libxpm4 arm64 1:3.5.12-1 [43.9 kB] Get:161 http://mirror.einval.org/debian sid/main arm64 libxaw7 arm64 2:1.0.13-1.1 [184 kB] Get:162 http://mirror.einval.org/debian sid/main arm64 libxi6 arm64 2:1.8-1 [82.1 kB] Get:163 http://mirror.einval.org/debian sid/main arm64 libzzip-0-13 arm64 0.13.72+dfsg.1-1.1 [58.3 kB] Get:164 http://mirror.einval.org/debian sid/main arm64 preview-latex-style all 12.2-1 [201 kB] Get:165 http://mirror.einval.org/debian sid/main arm64 t1utils arm64 1.41-4 [59.8 kB] Get:166 http://mirror.einval.org/debian sid/main arm64 texlive-binaries arm64 2021.20210626.59705-1 [7734 kB] Get:167 http://mirror.einval.org/debian sid/main arm64 xdg-utils all 1.1.3-4.1 [75.5 kB] Get:168 http://mirror.einval.org/debian sid/main arm64 texlive-base all 2021.20211217-1 [21.1 MB] Get:169 http://mirror.einval.org/debian sid/main arm64 texlive-fonts-recommended all 2021.20211217-1 [5005 kB] Get:170 http://mirror.einval.org/debian sid/main arm64 texlive-latex-base all 2021.20211217-1 [1159 kB] Get:171 http://mirror.einval.org/debian sid/main arm64 texlive-latex-recommended all 2021.20211217-1 [14.4 MB] Get:172 http://mirror.einval.org/debian sid/main arm64 texlive-pictures all 2021.20211217-1 [8717 kB] Get:173 http://mirror.einval.org/debian sid/main arm64 texlive-latex-extra all 2021.20211217-1 [14.2 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 314 MB in 4s (79.0 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 12351 files and directories currently installed.) Preparing to unpack .../liblocale-gettext-perl_1.07-4+b1_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b1) ... Selecting previously unselected package libpython3.9-minimal:arm64. Preparing to unpack .../libpython3.9-minimal_3.9.10-1_arm64.deb ... Unpacking libpython3.9-minimal:arm64 (3.9.10-1) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../libexpat1_2.4.3-1_arm64.deb ... Unpacking libexpat1:arm64 (2.4.3-1) ... Selecting previously unselected package python3.9-minimal. Preparing to unpack .../python3.9-minimal_3.9.10-1_arm64.deb ... Unpacking python3.9-minimal (3.9.10-1) ... Setting up libpython3.9-minimal:arm64 (3.9.10-1) ... Setting up libexpat1:arm64 (2.4.3-1) ... Setting up python3.9-minimal (3.9.10-1) ... Selecting previously unselected package python3-minimal. (Reading database ... 12660 files and directories currently installed.) 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Unpacking sensible-utils (0.0.17) ... Selecting previously unselected package ucf. Preparing to unpack .../002-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package tex-common. Preparing to unpack .../003-tex-common_6.17_all.deb ... Unpacking tex-common (6.17) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.41-2_arm64.deb ... Unpacking libmagic-mgc (1:5.41-2) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../005-libmagic1_1%3a5.41-2_arm64.deb ... Unpacking libmagic1:arm64 (1:5.41-2) ... Selecting previously unselected package file. Preparing to unpack .../006-file_1%3a5.41-2_arm64.deb ... Unpacking file (1:5.41-2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../007-gettext-base_0.21-4_arm64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libuchardet0:arm64. 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Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../015-autoconf_2.71-2_all.deb ... Unpacking autoconf (2.71-2) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../016-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../017-automake_1%3a1.16.5-1.1_all.deb ... Unpacking automake (1:1.16.5-1.1) ... Selecting previously unselected package autopoint. Preparing to unpack .../018-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package gcc-11-x86-64-linux-gnu-base:arm64. Preparing to unpack .../019-gcc-11-x86-64-linux-gnu-base_11.2.0-9cross1_arm64.deb ... Unpacking gcc-11-x86-64-linux-gnu-base:arm64 (11.2.0-9cross1) ... Selecting previously unselected package cpp-11-x86-64-linux-gnu. Preparing to unpack .../020-cpp-11-x86-64-linux-gnu_11.2.0-9cross1_arm64.deb ... Unpacking cpp-11-x86-64-linux-gnu (11.2.0-9cross1) ... Selecting previously unselected package cpp-x86-64-linux-gnu. Preparing to unpack .../021-cpp-x86-64-linux-gnu_4%3a11.2.0-2_arm64.deb ... Unpacking cpp-x86-64-linux-gnu (4:11.2.0-2) ... Selecting previously unselected package cross-config. Preparing to unpack .../022-cross-config_2.6.18+nmu2_all.deb ... Unpacking cross-config (2.6.18+nmu2) ... Selecting previously unselected package binutils-x86-64-linux-gnu. Preparing to unpack .../023-binutils-x86-64-linux-gnu_2.37.50.20220106-2_arm64.deb ... Unpacking binutils-x86-64-linux-gnu (2.37.50.20220106-2) ... Selecting previously unselected package gcc-11-cross-base. Preparing to unpack .../024-gcc-11-cross-base_11.2.0-9cross1_all.deb ... Unpacking gcc-11-cross-base (11.2.0-9cross1) ... Selecting previously unselected package libgcc-s1-amd64-cross. Preparing to unpack .../025-libgcc-s1-amd64-cross_11.2.0-9cross1_all.deb ... Unpacking libgcc-s1-amd64-cross (11.2.0-9cross1) ... Selecting previously unselected package libgomp1-amd64-cross. Preparing to unpack .../026-libgomp1-amd64-cross_11.2.0-9cross1_all.deb ... Unpacking libgomp1-amd64-cross (11.2.0-9cross1) ... Selecting previously unselected package libitm1-amd64-cross. Preparing to unpack .../027-libitm1-amd64-cross_11.2.0-9cross1_all.deb ... Unpacking libitm1-amd64-cross (11.2.0-9cross1) ... Selecting previously unselected package libatomic1-amd64-cross. Preparing to unpack .../028-libatomic1-amd64-cross_11.2.0-9cross1_all.deb ... Unpacking libatomic1-amd64-cross (11.2.0-9cross1) ... Selecting previously unselected package libasan6-amd64-cross. Preparing to unpack .../029-libasan6-amd64-cross_11.2.0-9cross1_all.deb ... Unpacking libasan6-amd64-cross (11.2.0-9cross1) ... Selecting previously unselected package liblsan0-amd64-cross. Preparing to unpack .../030-liblsan0-amd64-cross_11.2.0-9cross1_all.deb ... Unpacking liblsan0-amd64-cross (11.2.0-9cross1) ... Selecting previously unselected package libtsan0-amd64-cross. Preparing to unpack .../031-libtsan0-amd64-cross_11.2.0-9cross1_all.deb ... Unpacking libtsan0-amd64-cross (11.2.0-9cross1) ... Selecting previously unselected package libc6-amd64-cross. Preparing to unpack .../032-libc6-amd64-cross_2.33-1cross1_all.deb ... Unpacking libc6-amd64-cross (2.33-1cross1) ... Selecting previously unselected package libstdc++6-amd64-cross. Preparing to unpack .../033-libstdc++6-amd64-cross_11.2.0-9cross1_all.deb ... Unpacking libstdc++6-amd64-cross (11.2.0-9cross1) ... Selecting previously unselected package libubsan1-amd64-cross. Preparing to unpack .../034-libubsan1-amd64-cross_11.2.0-9cross1_all.deb ... Unpacking libubsan1-amd64-cross (11.2.0-9cross1) ... Selecting previously unselected package libquadmath0-amd64-cross. 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Setting up linux-libc-dev-amd64-cross (5.15.5-1cross1) ... Setting up bsdextrautils (2.37.2-6) ... Setting up libicu67:arm64 (67.1-7) ... Setting up libmagic-mgc (1:5.41-2) ... Setting up libtexlua53:arm64 (2021.20210626.59705-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:arm64 (2.70.2-1) ... No schema files found: doing nothing. Setting up libdebhelper-perl (13.6) ... Setting up libbrotli1:arm64 (1.0.9-2+b3) ... Setting up libfontbox-java (1:1.8.16-2) ... Setting up libsqlite3-0:arm64 (3.37.2-2) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of restart. Setting up libmagic1:arm64 (1:5.41-2) ... Setting up linux-libc-dev:amd64 (5.15.15-1) ... Setting up libxml-namespacesupport-perl (1.12-1.1) ... Setting up gettext-base (0.21-4) ... Setting up gcc-11-x86-64-linux-gnu-base:arm64 (11.2.0-9cross1) ... Setting up libzzip-0-13:arm64 (0.13.72+dfsg.1-1.1) ... Setting up file (1:5.41-2) ... Setting up libyaml-perl (1.30-1) ... Setting up libxml-sax-base-perl (1.09-1.1) ... Setting up libio-string-perl (1.08-3.1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up cross-config (2.6.18+nmu2) ... Setting up libx11-data (2:1.7.2-2) ... Setting up libteckit0:arm64 (2.5.11+ds1-1) ... Setting up libapache-pom-java (18-1) ... Setting up libsigsegv2:arm64 (2.13-1) ... Setting up t1utils (1.41-4) ... Setting up libpng16-16:arm64 (1.6.37-3) ... Setting up autopoint (0.21-4) ... Setting up pkg-config (0.29.2-1) ... Setting up fonts-dejavu-core (2.37-2) ... Setting up libc6-amd64-cross (2.33-1cross1) ... Setting up libncursesw6:arm64 (6.3-2) ... Setting up libkpathsea6:arm64 (2021.20210626.59705-1) ... Setting up gcc-11-cross-base (11.2.0-9cross1) ... Setting up libmd0:arm64 (1.0.4-1) ... Setting up sensible-utils (0.0.17) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libmpdec3:arm64 (2.5.1-2) ... Setting up fonts-lmodern (2.004.5-6.1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libgcc-s1-amd64-cross (11.2.0-9cross1) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up libbsd0:arm64 (0.11.3-1) ... Setting up libelf1:arm64 (0.186-1) ... Setting up readline-common (8.1.2-1) ... Setting up libxml2:arm64 (2.9.12+dfsg-5+b1) ... Setting up xdg-utils (1.1.3-4.1) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up liblocale-gettext-perl (1.07-4+b1) ... Setting up libasan6-amd64-cross (11.2.0-9cross1) ... Setting up libsynctex2:arm64 (2021.20210626.59705-1) ... Setting up binutils-x86-64-linux-gnu (2.37.50.20220106-2) ... Setting up libstdc++6-amd64-cross (11.2.0-9cross1) ... Setting up libfile-stripnondeterminism-perl (1.13.0-1) ... Setting up libice6:arm64 (2:1.0.10-1) ... Setting up libxdmcp6:arm64 (1:1.1.2-3) ... Setting up libxcb1:arm64 (1.14-3) ... Setting up gettext (0.21-4) ... Setting up libpdfbox-java (1:1.8.16-2) ... Setting up libtool (2.4.6-15) ... Setting up libxcb-render0:arm64 (1.14-3) ... Setting up liblsan0-amd64-cross (11.2.0-9cross1) ... Setting up libc6-dev-amd64-cross (2.33-1cross1) ... Setting up libreadline8:arm64 (8.1.2-1) ... Setting up libcommons-parent-java (43-1) ... Setting up libtsan0-amd64-cross (11.2.0-9cross1) ... Setting up libcommons-logging-java (1.2-2) ... Setting up cpp-11-x86-64-linux-gnu (11.2.0-9cross1) ... Setting up m4 (1.4.18-5) ... Setting up libxcb-shm0:arm64 (1.14-3) ... Setting up libgomp1-amd64-cross (11.2.0-9cross1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libitm1-amd64-cross (11.2.0-9cross1) ... Setting up libptexenc1:arm64 (2021.20210626.59705-1) ... Setting up libatomic1-amd64-cross (11.2.0-9cross1) ... Setting up libfreetype6:arm64 (2.11.1+dfsg-1) ... Setting up libeigen3-dev (3.4.0-2) ... Setting up libquadmath0-amd64-cross (11.2.0-9cross1) ... Setting up libubsan1-amd64-cross (11.2.0-9cross1) ... Setting up ucf (3.0043) ... Setting up autoconf (2.71-2) ... Setting up dh-strip-nondeterminism (1.13.0-1) ... Setting up dwz (0.14-1) ... Setting up groff-base (1.22.4-8) ... Setting up libx11-6:arm64 (2:1.7.2-2+b1) ... Setting up libharfbuzz0b:arm64 (2.7.4-1) ... Setting up libsm6:arm64 (2:1.2.3-1) ... Setting up libpython3.9-stdlib:arm64 (3.9.10-1) ... Setting up libpython3-stdlib:arm64 (3.9.8-1) ... Setting up cpp-x86-64-linux-gnu (4:11.2.0-2) ... Setting up automake (1:1.16.5-1.1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libgcc-11-dev-amd64-cross (11.2.0-9cross1) ... Setting up libpaper1:arm64 (1.1.28+b1) ... Creating config file /etc/papersize with new version Setting up libxpm4:arm64 (1:3.5.12-1) ... Setting up libxrender1:arm64 (1:0.9.10-1) ... Setting up fontconfig-config (2.13.1-4.2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxext6:arm64 (2:1.3.4-1) ... Setting up libpaper-utils (1.1.28+b1) ... Setting up man-db (2.9.4-4) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-autoreconf (20) ... Setting up tex-common (6.17) ... update-language: texlive-base not installed and configured, doing nothing! Setting up gcc-11-x86-64-linux-gnu (11.2.0-9cross1) ... Setting up libxt6:arm64 (1:1.2.0-1) ... Setting up libxml-libxml-perl (2.0207+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++-11-dev-amd64-cross (11.2.0-9cross1) ... Setting up libfontconfig1:arm64 (2.13.1-4.2) ... Setting up python3.9 (3.9.10-1) ... Setting up g++-11-x86-64-linux-gnu (11.2.0-9cross1) ... Setting up libxmu6:arm64 (2:1.1.2-2+b3) ... Setting up libxi6:arm64 (2:1.8-1) ... Setting up gcc-x86-64-linux-gnu (4:11.2.0-2) ... Setting up preview-latex-style (12.2-1) ... Setting up debhelper (13.6) ... Setting up python3 (3.9.8-1) ... Setting up libxaw7:arm64 (2:1.0.13-1.1) ... Setting up libcairo2:arm64 (1.16.0-5) ... Setting up libxml-simple-perl (2.25-1) ... Setting up texlive-binaries (2021.20210626.59705-1) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up g++-x86-64-linux-gnu (4:11.2.0-2) ... Setting up texlive-base (2021.20211217-1) ... /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex Setting up libconfig-auto-perl (0.44-1.1) ... Setting up texlive-latex-base (2021.20211217-1) ... Setting up texlive-latex-recommended (2021.20211217-1) ... Setting up texlive-pictures (2021.20211217-1) ... Setting up texlive-fonts-recommended (2021.20211217-1) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu2) ... Setting up texlive-latex-extra (2021.20211217-1) ... Setting up dpkg-cross (2.6.18+nmu2) ... Setting up crossbuild-essential-amd64 (12.9) ... Setting up libgcc-s1:amd64 (11.2.0-14) ... Setting up libc6:amd64 (2.33-3) ... Setting up libstdc++6:amd64 (11.2.0-14) ... Setting up liblsan0:amd64 (11.2.0-14) ... Setting up libitm1:amd64 (11.2.0-14) ... Setting up libtsan0:amd64 (11.2.0-14) ... Setting up libkeyutils1:amd64 (1.6.1-2) ... Setting up libssl1.1:amd64 (1.1.1m-1) ... Setting up libcrypt1:amd64 (1:4.4.27-1.1) ... Setting up libcom-err2:amd64 (1.46.5-2) ... Setting up libgomp1:amd64 (11.2.0-14) ... Setting up libasan6:amd64 (11.2.0-14) ... Setting up libkrb5support0:amd64 (1.18.3-7) ... Setting up libquadmath0:amd64 (11.2.0-14) ... Setting up libatomic1:amd64 (11.2.0-14) ... Setting up libk5crypto3:amd64 (1.18.3-7) ... Setting up libubsan1:amd64 (11.2.0-14) ... Setting up libgcc-11-dev:amd64 (11.2.0-14) ... Setting up libcrypt-dev:amd64 (1:4.4.27-1.1) ... Setting up libkrb5-3:amd64 (1.18.3-7) ... Setting up libgssapi-krb5-2:amd64 (1.18.3-7) ... Setting up libtirpc3:amd64 (1.3.2-2) ... Setting up libtirpc-dev:amd64 (1.3.2-2) ... Setting up libnsl2:amd64 (1.3.0-2) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up libc6-dev:amd64 (2.33-3) ... Setting up libstdc++-11-dev:amd64 (11.2.0-14) ... Setting up sbuild-build-depends-main-dummy:amd64 (0.invalid.0) ... Processing triggers for libc-bin (2.33-3) ... Processing triggers for tex-common (6.17) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.9.0-0.bpo.2-arm64 #1 SMP Debian 5.9.6-1~bpo10+1 (2020-11-19) arm64 (aarch64) Toolchain package versions: binutils_2.37.50.20220106-2 dpkg-dev_1.21.1 g++-11_11.2.0-14 gcc-11_11.2.0-14 libc6-dev_2.33-3 libstdc++-11-dev_11.2.0-14 libstdc++-11-dev-amd64-cross_11.2.0-9cross1 libstdc++6_11.2.0-14 libstdc++6-amd64-cross_11.2.0-9cross1 linux-libc-dev_5.15.15-1 Package versions: adduser_3.118 apt_2.3.14 autoconf_2.71-2 automake_1:1.16.5-1.1 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_12.2 base-passwd_3.5.52 bash_5.1-6 binutils_2.37.50.20220106-2 binutils-aarch64-linux-gnu_2.37.50.20220106-2 binutils-common_2.37.50.20220106-2 binutils-x86-64-linux-gnu_2.37.50.20220106-2 bsdextrautils_2.37.2-6 bsdutils_1:2.37.2-6 build-essential_12.9 bzip2_1.0.8-5 coreutils_8.32-4.1 cpp_4:11.2.0-2 cpp-11_11.2.0-14 cpp-11-x86-64-linux-gnu_11.2.0-9cross1 cpp-x86-64-linux-gnu_4:11.2.0-2 cross-config_2.6.18+nmu2 crossbuild-essential-amd64_12.9 dash_0.5.11+git20210903+057cd650a4ed-3 debconf_1.5.79 debhelper_13.6 debian-archive-keyring_2021.1.1 debianutils_5.5-1 dh-autoreconf_20 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.7-5 dpkg_1.21.1 dpkg-cross_2.6.18+nmu2 dpkg-dev_1.21.1 dwz_0.14-1 fakeroot_1.27-1 file_1:5.41-2 findutils_4.8.0-1 fontconfig-config_2.13.1-4.2 fonts-dejavu-core_2.37-2 fonts-lmodern_2.004.5-6.1 g++_4:11.2.0-2 g++-11_11.2.0-14 g++-11-x86-64-linux-gnu_11.2.0-9cross1 g++-x86-64-linux-gnu_4:11.2.0-2 gcc_4:11.2.0-2 gcc-10-base_10.3.0-14 gcc-11_11.2.0-14 gcc-11-base_11.2.0-14 gcc-11-cross-base_11.2.0-9cross1 gcc-11-x86-64-linux-gnu_11.2.0-9cross1 gcc-11-x86-64-linux-gnu-base_11.2.0-9cross1 gcc-x86-64-linux-gnu_4:11.2.0-2 gettext_0.21-4 gettext-base_0.21-4 gpgv_2.2.27-3 grep_3.7-1 groff-base_1.22.4-8 gzip_1.10-4 hostname_3.23 init-system-helpers_1.61 intltool-debian_0.35.0+20060710.5 libacl1_2.3.1-1 libapache-pom-java_18-1 libapt-pkg6.0_2.3.14 libarchive-zip-perl_1.68-1 libasan6_11.2.0-14 libasan6-amd64-cross_11.2.0-9cross1 libatomic1_11.2.0-14 libatomic1-amd64-cross_11.2.0-9cross1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.6-1 libaudit1_1:3.0.6-1+b1 libbinutils_2.37.50.20220106-2 libblkid1_2.37.2-6 libbrotli1_1.0.9-2+b3 libbsd0_0.11.3-1 libbz2-1.0_1.0.8-5 libc-bin_2.33-3 libc-dev-bin_2.33-3 libc6_2.33-3 libc6-amd64-cross_2.33-1cross1 libc6-dev_2.33-3 libc6-dev-amd64-cross_2.33-1cross1 libcairo2_1.16.0-5 libcap-ng0_0.7.9-2.2+b1 libcap2_1:2.44-1 libcc1-0_11.2.0-14 libcom-err2_1.46.5-2 libcommons-logging-java_1.2-2 libcommons-parent-java_43-1 libconfig-auto-perl_0.44-1.1 libconfig-inifiles-perl_3.000003-1 libcrypt-dev_1:4.4.27-1.1 libcrypt1_1:4.4.27-1.1 libctf-nobfd0_2.37.50.20220106-2 libctf0_2.37.50.20220106-2 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.261 libdebhelper-perl_13.6 libdebian-dpkgcross-perl_2.6.18+nmu2 libdpkg-perl_1.21.1 libeigen3-dev_3.4.0-2 libelf1_0.186-1 libexpat1_2.4.3-1 libfakeroot_1.27-1 libffi8_3.4.2-4 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.13.0-1 libfile-which-perl_1.23-1 libfontbox-java_1:1.8.16-2 libfontconfig1_2.13.1-4.2 libfreetype6_2.11.1+dfsg-1 libgcc-11-dev_11.2.0-14 libgcc-11-dev-amd64-cross_11.2.0-9cross1 libgcc-s1_11.2.0-14 libgcc-s1-amd64-cross_11.2.0-9cross1 libgcrypt20_1.9.4-5 libgdbm-compat4_1.22-1 libgdbm6_1.22-1 libglib2.0-0_2.70.2-1 libgmp10_2:6.2.1+dfsg-3 libgnutls30_3.7.3-2 libgomp1_11.2.0-14 libgomp1-amd64-cross_11.2.0-9cross1 libgpg-error0_1.43-3 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.18.3-7 libharfbuzz0b_2.7.4-1 libhogweed6_3.7.3-1 libhwasan0_11.2.0-14 libice6_2:1.0.10-1 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libpython3.9-stdlib_3.9.10-1 libquadmath0_11.2.0-14 libquadmath0-amd64-cross_11.2.0-9cross1 libreadline8_8.1.2-1 libseccomp2_2.5.3-2 libselinux1_3.3-1+b1 libsemanage-common_3.3-1 libsemanage2_3.3-1+b1 libsepol2_3.3-1 libsigsegv2_2.13-1 libsm6_2:1.2.3-1 libsmartcols1_2.37.2-6 libsqlite3-0_3.37.2-2 libssl1.1_1.1.1m-1 libstdc++-11-dev_11.2.0-14 libstdc++-11-dev-amd64-cross_11.2.0-9cross1 libstdc++6_11.2.0-14 libstdc++6-amd64-cross_11.2.0-9cross1 libsub-override-perl_0.09-2 libsynctex2_2021.20210626.59705-1 libsystemd0_250.3-1 libtasn1-6_4.18.0-4 libteckit0_2.5.11+ds1-1 libtexlua53_2021.20210626.59705-1 libtinfo6_6.3-2 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.6-15 libtsan0_11.2.0-14 libtsan0-amd64-cross_11.2.0-9cross1 libubsan1_11.2.0-14 libubsan1-amd64-cross_11.2.0-9cross1 libuchardet0_0.0.7-1 libudev1_250.3-1 libunistring2_0.9.10-6 libuuid1_2.37.2-6 libx11-6_2:1.7.2-2+b1 libx11-data_2:1.7.2-2 libxau6_1:1.0.9-1 libxaw7_2:1.0.13-1.1 libxcb-render0_1.14-3 libxcb-shm0_1.14-3 libxcb1_1.14-3 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.4-1 libxi6_2:1.8-1 libxml-libxml-perl_2.0207+dfsg-2 libxml-namespacesupport-perl_1.12-1.1 libxml-sax-base-perl_1.09-1.1 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-1 libxml2_2.9.12+dfsg-5+b1 libxmu6_2:1.1.2-2+b3 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.2.0-1 libxxhash0_0.8.1-1 libyaml-perl_1.30-1 libzstd1_1.4.8+dfsg-3 libzzip-0-13_0.13.72+dfsg.1-1.1 linux-libc-dev_5.15.15-1 linux-libc-dev-amd64-cross_5.15.5-1cross1 login_1:4.8.1-2 lsb-base_11.1.0 m4_1.4.18-5 make_4.3-4.1 man-db_2.9.4-4 mawk_1.3.4.20200120-2 media-types_4.0.0 mount_2.37.2-6 ncurses-base_6.3-2 ncurses-bin_6.3-2 passwd_1:4.8.1-2 patch_2.7.6-7 perl_5.32.1-6 perl-base_5.32.1-6 perl-modules-5.32_5.32.1-6 pkg-config_0.29.2-1 po-debconf_1.0.21+nmu1 preview-latex-style_12.2-1 python3_3.9.8-1 python3-minimal_3.9.8-1 python3.9_3.9.10-1 python3.9-minimal_3.9.10-1 readline-common_8.1.2-1 rpcsvc-proto_1.4.2-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.01-1 t1utils_1.41-4 tar_1.34+dfsg-1 tex-common_6.17 texlive-base_2021.20211217-1 texlive-binaries_2021.20210626.59705-1 texlive-fonts-recommended_2021.20211217-1 texlive-latex-base_2021.20211217-1 texlive-latex-extra_2021.20211217-1 texlive-latex-recommended_2021.20211217-1 texlive-pictures_2021.20211217-1 tzdata_2021e-1 ucf_3.0043 util-linux_2.37.2-6 x11-common_1:7.7+23 xdg-utils_1.1.3-4.1 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: probabel Binary: probabel, probabel-examples Architecture: any all Version: 0.5.0+dfsg-5 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , L.C. Karssen , Pranav Ballaney Homepage: http://www.genabel.org Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/probabel Vcs-Git: https://salsa.debian.org/med-team/probabel.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), libeigen3-dev, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-recommended, r-cran-survival , debhelper Package-List: probabel deb science optional arch=any probabel-examples deb science optional arch=all Checksums-Sha1: de12edeb7b37edcfe5c0e68b05d2fbc4bb2a08aa 1774384 probabel_0.5.0+dfsg.orig.tar.xz ade83803e87deb9604f649fe49196af76ba73c49 7892 probabel_0.5.0+dfsg-5.debian.tar.xz Checksums-Sha256: 610daf84ba8883b5908cd125c6c117068cfbac38ee486d496622b1d9e0726ca3 1774384 probabel_0.5.0+dfsg.orig.tar.xz 0499a9b2c1b54bb943e5b382c0a9d834257bfebdb0c5243638d496701592008c 7892 probabel_0.5.0+dfsg-5.debian.tar.xz Files: efdfa6dab47edc3b8dd5deb1f6717b9b 1774384 probabel_0.5.0+dfsg.orig.tar.xz 2590375d6e7f94a8fd742ea96a7d457a 7892 probabel_0.5.0+dfsg-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmHm42URHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEb8hAAgzIBf2m1TNGSObKCCyzOW5TRZdmAv1jY NinxUdJKESZRSkyDVgwlVk59Vw+MDIOiKZuuiDN8CqvJScMONyP+v6hIjkcTaXFy ua33HLeYbm/mtxyN/2pFg7FrWR41aj1QewGTnRn4PahXWin1dFE2nI2dhpX9Q68M 2fUA9xm1qs8bDwocfLI1Eu3llJN0WMaIpr9V8L/SqbCfYbhpTgXkaPumWkehu6a0 ykGWFbPyeEjHBFbnummDDXxB36xNUMCcqdBDCpsascAE3fGuQFzwt2a3SU6dy+d1 3RVZHLb0Z42xu6aNNh+eCenuQbLTcnSQv1FbETZOVFQRvGnEIt5hrR1dcsQ3XBSF CAcVxIAkBwcG2+JSOrtIlgMIVATD1e8wWAVjqp1vPxj/A5Ev5iHpv0WdSiIyR3SW jf1cJSjz5EBbtygmf4504Y6Puktha1QSCNt3ljuEWaPkj/QsbaBpxM+/RqNwgLIs SvaTmMXxDCLGO0TVkdDSOgJkcwtuhJciiCSeLXB6FPfh06mzobw6d7wXP9I80U2S vvLoJIuAiCugw2MXdGvywhHSG/2TexS+p6WCqi1dA6IIdY+ZTP9hNlyjEJqpEl1Y r3DC8zeNtpITJY3N6G+QRVAfWYDXCeOkkXM/Iz9dVaj+rgrSNdowfObXufb1GTPS eebQ8/hsBWs= =5o/j -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.8j_kfHdl/trustedkeys.kbx': General error gpgv: Signature made Tue Jan 18 15:57:25 2022 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify signature ./probabel_0.5.0+dfsg-5.dsc dpkg-source: info: extracting probabel in /<> dpkg-source: info: unpacking probabel_0.5.0+dfsg.orig.tar.xz dpkg-source: info: unpacking probabel_0.5.0+dfsg-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying examples.patch dpkg-source: info: applying c++11.patch dpkg-source: info: applying ignore_failing_build_time_test.patch Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Timed Build Commands | +------------------------------------------------------------------------------+ ulimit -c --------- 0 I: Finished running 'ulimit -c'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.amd64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_GB.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmutg PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=crossqa-sid SCHROOT_CHROOT_NAME=crossqa-sid SCHROOT_COMMAND=env SCHROOT_GID=1002 SCHROOT_GROUP=helmutg SCHROOT_SESSION_ID=crossqa-sid-675a1bbe-02cc-40f8-afde-e6b542a806a8 SCHROOT_UID=1002 SCHROOT_USER=helmutg SHELL=/bin/sh USER=helmutg dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aamd64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package probabel dpkg-buildpackage: info: source version 0.5.0+dfsg-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type x86_64-linux-gnu does not match CC system type aarch64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- --disable-silent-rules --with-eigen-include-path=/usr/include/eigen3 ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --disable-silent-rules --with-eigen-include-path=/usr/include/eigen3 configure: loading site script /etc/dpkg-cross/cross-config.amd64 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for a race-free mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking whether to enable maintainer-specific portions of Makefiles... no checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to enable C11 features... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of x86_64-linux-gnu-gcc... none checking whether ln -s works... yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether the compiler supports GNU C++... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking for x86_64-linux-gnu-g++ option to enable C++11 features... none needed checking dependency style of x86_64-linux-gnu-g++... none checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for size_t... yes checking for working alloca.h... yes checking for alloca... yes checking for float.h... yes checking for inttypes.h... (cached) yes checking for libintl.h... yes checking for limits.h... yes checking for stddef.h... yes checking for stdint.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for sys/param.h... yes checking for wchar.h... yes checking for wctype.h... yes checking for Eigen/Dense... yes checking for Eigen/LU... yes checking for _Bool... no checking for stdbool.h that conforms to C99... yes checking for inline... inline checking for off_t... yes checking for size_t... (cached) yes checking for error_at_line... yes checking for pow... yes checking for putenv... yes checking for sqrt... yes checking for strdup... yes checking for strncasecmp... yes checking for floor... yes checking for working strtod... no checking for pow... (cached) yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for _LARGEFILE_SOURCE value needed for large files... no checking for a sed that does not truncate output... /bin/sed checking for gawk... (cached) mawk checking for R... no configure: R not found - Unable to do tests comparing ProbABEL output against R output configure: building of the PDF of the user manual from LaTeX source is enabled checking for pdflatex... pdflatex checking for doxygen... no configure: Doxygen not found - Not generating code documentation configure: building of palinear is enabled configure: building of palogist is enabled configure: building of pacoxph is enabled checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating doc/Makefile config.status: creating examples/Makefile config.status: creating checks/Makefile config.status: creating checks/R-tests/Makefile config.status: creating src/config.h config.status: executing depfiles commands make[1]: Leaving directory '/<>' dh_auto_build -a make -j1 make[1]: Entering directory '/<>' Making all in src make[2]: Entering directory '/<>/src' make all-am make[3]: Entering directory '/<>/src' x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-main.o `test -f 'main.cpp' || echo './'`main.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-invsigma.o `test -f 'invsigma.cpp' || echo './'`invsigma.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-gendata.o `test -f 'gendata.cpp' || echo './'`gendata.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-eigen_mematrix.o `test -f 'eigen_mematrix.cpp' || echo './'`eigen_mematrix.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-command_line_settings.o `test -f 'command_line_settings.cpp' || echo './'`command_line_settings.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-reg1.o `test -f 'reg1.cpp' || echo './'`reg1.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-usage.o `test -f 'usage.cpp' || echo './'`usage.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-utilities.o `test -f 'utilities.cpp' || echo './'`utilities.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-phedata.o `test -f 'phedata.cpp' || echo './'`phedata.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-regdata.o `test -f 'regdata.cpp' || echo './'`regdata.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-maskedmatrix.o `test -f 'maskedmatrix.cpp' || echo './'`maskedmatrix.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-main_functions_dump.o `test -f 'main_functions_dump.cpp' || echo './'`main_functions_dump.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palinear-mlinfo.o `test -f 'mlinfo.cpp' || echo './'`mlinfo.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-AbstractMatrix.o `test -f 'fvlib/AbstractMatrix.cpp' || echo './'`fvlib/AbstractMatrix.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-CastUtils.o `test -f 'fvlib/CastUtils.cpp' || echo './'`fvlib/CastUtils.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-convert_util.o `test -f 'fvlib/convert_util.cpp' || echo './'`fvlib/convert_util.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-FileVector.o `test -f 'fvlib/FileVector.cpp' || echo './'`fvlib/FileVector.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-FilteredMatrix.o `test -f 'fvlib/FilteredMatrix.cpp' || echo './'`fvlib/FilteredMatrix.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-frutil.o `test -f 'fvlib/frutil.cpp' || echo './'`fvlib/frutil.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-Logger.o `test -f 'fvlib/Logger.cpp' || echo './'`fvlib/Logger.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-RealHandlerWrapper.o `test -f 'fvlib/RealHandlerWrapper.cpp' || echo './'`fvlib/RealHandlerWrapper.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-ReusableFileHandle.o `test -f 'fvlib/ReusableFileHandle.cpp' || echo './'`fvlib/ReusableFileHandle.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLINEAR -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palinear-Transposer.o `test -f 'fvlib/Transposer.cpp' || echo './'`fvlib/Transposer.cpp x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o palinear palinear-main.o palinear-invsigma.o palinear-gendata.o palinear-eigen_mematrix.o palinear-command_line_settings.o palinear-reg1.o palinear-usage.o palinear-utilities.o palinear-phedata.o palinear-regdata.o palinear-maskedmatrix.o palinear-main_functions_dump.o palinear-mlinfo.o fvlib/palinear-AbstractMatrix.o fvlib/palinear-CastUtils.o fvlib/palinear-convert_util.o fvlib/palinear-FileVector.o fvlib/palinear-FilteredMatrix.o fvlib/palinear-frutil.o fvlib/palinear-Logger.o fvlib/palinear-RealHandlerWrapper.o fvlib/palinear-ReusableFileHandle.o fvlib/palinear-Transposer.o x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-main.o `test -f 'main.cpp' || echo './'`main.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-invsigma.o `test -f 'invsigma.cpp' || echo './'`invsigma.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-gendata.o `test -f 'gendata.cpp' || echo './'`gendata.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-eigen_mematrix.o `test -f 'eigen_mematrix.cpp' || echo './'`eigen_mematrix.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-command_line_settings.o `test -f 'command_line_settings.cpp' || echo './'`command_line_settings.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-reg1.o `test -f 'reg1.cpp' || echo './'`reg1.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-usage.o `test -f 'usage.cpp' || echo './'`usage.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-utilities.o `test -f 'utilities.cpp' || echo './'`utilities.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-phedata.o `test -f 'phedata.cpp' || echo './'`phedata.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-regdata.o `test -f 'regdata.cpp' || echo './'`regdata.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-maskedmatrix.o `test -f 'maskedmatrix.cpp' || echo './'`maskedmatrix.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-main_functions_dump.o `test -f 'main_functions_dump.cpp' || echo './'`main_functions_dump.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o palogist-mlinfo.o `test -f 'mlinfo.cpp' || echo './'`mlinfo.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-AbstractMatrix.o `test -f 'fvlib/AbstractMatrix.cpp' || echo './'`fvlib/AbstractMatrix.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-CastUtils.o `test -f 'fvlib/CastUtils.cpp' || echo './'`fvlib/CastUtils.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-convert_util.o `test -f 'fvlib/convert_util.cpp' || echo './'`fvlib/convert_util.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-FileVector.o `test -f 'fvlib/FileVector.cpp' || echo './'`fvlib/FileVector.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-FilteredMatrix.o `test -f 'fvlib/FilteredMatrix.cpp' || echo './'`fvlib/FilteredMatrix.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-frutil.o `test -f 'fvlib/frutil.cpp' || echo './'`fvlib/frutil.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-Logger.o `test -f 'fvlib/Logger.cpp' || echo './'`fvlib/Logger.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-RealHandlerWrapper.o `test -f 'fvlib/RealHandlerWrapper.cpp' || echo './'`fvlib/RealHandlerWrapper.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-ReusableFileHandle.o `test -f 'fvlib/ReusableFileHandle.cpp' || echo './'`fvlib/ReusableFileHandle.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DLOGISTIC -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/palogist-Transposer.o `test -f 'fvlib/Transposer.cpp' || echo './'`fvlib/Transposer.cpp x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o palogist palogist-main.o palogist-invsigma.o palogist-gendata.o palogist-eigen_mematrix.o palogist-command_line_settings.o palogist-reg1.o palogist-usage.o palogist-utilities.o palogist-phedata.o palogist-regdata.o palogist-maskedmatrix.o palogist-main_functions_dump.o palogist-mlinfo.o fvlib/palogist-AbstractMatrix.o fvlib/palogist-CastUtils.o fvlib/palogist-convert_util.o fvlib/palogist-FileVector.o fvlib/palogist-FilteredMatrix.o fvlib/palogist-frutil.o fvlib/palogist-Logger.o fvlib/palogist-RealHandlerWrapper.o fvlib/palogist-ReusableFileHandle.o fvlib/palogist-Transposer.o x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-coxfit2.o `test -f 'coxfit2.c' || echo './'`coxfit2.c x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-chinv2.o `test -f 'chinv2.c' || echo './'`chinv2.c x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-cholesky2.o `test -f 'cholesky2.c' || echo './'`cholesky2.c x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-chsolve2.o `test -f 'chsolve2.c' || echo './'`chsolve2.c x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-dmatrix.o `test -f 'dmatrix.c' || echo './'`dmatrix.c x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-main.o `test -f 'main.cpp' || echo './'`main.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-invsigma.o `test -f 'invsigma.cpp' || echo './'`invsigma.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-gendata.o `test -f 'gendata.cpp' || echo './'`gendata.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-eigen_mematrix.o `test -f 'eigen_mematrix.cpp' || echo './'`eigen_mematrix.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-command_line_settings.o `test -f 'command_line_settings.cpp' || echo './'`command_line_settings.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-reg1.o `test -f 'reg1.cpp' || echo './'`reg1.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-usage.o `test -f 'usage.cpp' || echo './'`usage.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-utilities.o `test -f 'utilities.cpp' || echo './'`utilities.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-phedata.o `test -f 'phedata.cpp' || echo './'`phedata.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-regdata.o `test -f 'regdata.cpp' || echo './'`regdata.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-maskedmatrix.o `test -f 'maskedmatrix.cpp' || echo './'`maskedmatrix.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-main_functions_dump.o `test -f 'main_functions_dump.cpp' || echo './'`main_functions_dump.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pacoxph-mlinfo.o `test -f 'mlinfo.cpp' || echo './'`mlinfo.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/pacoxph-AbstractMatrix.o `test -f 'fvlib/AbstractMatrix.cpp' || echo './'`fvlib/AbstractMatrix.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/pacoxph-CastUtils.o `test -f 'fvlib/CastUtils.cpp' || echo './'`fvlib/CastUtils.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/pacoxph-convert_util.o `test -f 'fvlib/convert_util.cpp' || echo './'`fvlib/convert_util.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/pacoxph-FileVector.o `test -f 'fvlib/FileVector.cpp' || echo './'`fvlib/FileVector.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -D_NOT_R_FILEVECTOR -I ../src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fvlib/pacoxph-FilteredMatrix.o `test -f 'fvlib/FilteredMatrix.cpp' || echo './'`fvlib/FilteredMatrix.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DCOXPH -I/usr/include/eigen3 -Wdate-time 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-fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o pacoxph pacoxph-coxfit2.o pacoxph-chinv2.o pacoxph-cholesky2.o pacoxph-chsolve2.o pacoxph-dmatrix.o pacoxph-main.o pacoxph-invsigma.o pacoxph-gendata.o pacoxph-eigen_mematrix.o pacoxph-command_line_settings.o pacoxph-reg1.o pacoxph-usage.o pacoxph-utilities.o pacoxph-phedata.o pacoxph-regdata.o pacoxph-maskedmatrix.o pacoxph-main_functions_dump.o pacoxph-mlinfo.o fvlib/pacoxph-AbstractMatrix.o fvlib/pacoxph-CastUtils.o fvlib/pacoxph-convert_util.o fvlib/pacoxph-FileVector.o fvlib/pacoxph-FilteredMatrix.o fvlib/pacoxph-frutil.o fvlib/pacoxph-Logger.o fvlib/pacoxph-RealHandlerWrapper.o fvlib/pacoxph-ReusableFileHandle.o fvlib/pacoxph-Transposer.o pacoxph-coxph_data.o make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' Making all in doc make[2]: Entering directory '/<>/doc' === Making ProbABEL_manual.aux file === pdflatex ./ProbABEL_manual.tex This is pdfTeX, Version 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Let's in-stall in a sub-di-rec-tory of your home di-rec-tory, e.g. \T1/cmtt/m/n/12 /home/yourusername/ProbABEL\T1/cmr /m/n/12 : Overfull \hbox (4.73831pt too wide) in paragraph at lines 268--272 []\T1/cmr/m/n/12 If all went well you will find the ex-e-cutable pro-grams (\T1 /cmtt/m/n/12 palinear\T1/cmr/m/n/12 , \T1/cmtt/m/n/12 palogist\T1/cmr/m/n/12 , [4] Overfull \hbox (1.38382pt too wide) in paragraph at lines 274--279 \T1/cmtt/m/n/12 ProbABEL \T1/cmr/m/n/12 takes three files as in-put: a file con -tain-ing SNP in-for-ma-tion (e.g. the [5] LaTeX Warning: Reference `sec:runanalysis' on page 6 undefined on input line 35 3. [6] Overfull \hbox (12.56972pt too wide) in paragraph at lines 377--384 []\T1/cmr/m/n/12 In the case of lin-ear or lo-gis-tic re-gres-sion (pro-grams \ T1/cmtt/m/n/12 palinear \T1/cmr/m/n/12 and \T1/cmtt/m/n/12 palogist\T1/cmr/m/n/ 12 , Overfull \hbox (14.44846pt too wide) in paragraph at lines 377--384 \T1/cmr/m/n/12 lin-ear re-gres-sion anal-y-sis fol-low here (also to be found i n \T1/cmtt/m/n/12 examples/height.txt\T1/cmr/m/n/12 ) [7] [8] Overfull \hbox (5.0841pt too wide) in paragraph at lines 454--458 []\T1/cmr/m/n/12 There are in to-tal 11 com-mand line op-tions you can spec-ify to the \T1/cmtt/m/n/12 ProbABEL [9] LaTeX Warning: Reference `ssec:dosein' on page 10 undefined on input line 503. LaTeX Warning: Reference `ssec:phenoin' on page 10 undefined on input line 505. LaTeX Warning: Reference `ssec:infoin' on page 10 undefined on input line 507. 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[13] [14] Overfull \hbox (4.6171pt too wide) in paragraph at lines 746--750 \T1/cmr/m/n/12 After in-stalling \T1/cmtt/m/n/12 ProbABEL \T1/cmr/m/n/12 you ca n find the \T1/cmtt/m/n/12 prepare_data.R \T1/cmr/m/n/12 file in the \T1/cmtt/m /n/12 scripts [15] [16] Overfull \hbox (8.33644pt too wide) in paragraph at lines 848--850 []\T1/cmr/m/n/12 Secondly, the Wald test can be used; for that the in-verse var iance-covariance [17] [18] LaTeX Warning: Reference `eq:expectation' on page 19 undefined on input line 94 4. LaTeX Warning: Reference `kinship' on page 19 undefined on input line 956. [19] [20] [21] No file ProbABEL_manual.ind. [22] (./ProbABEL_manual.aux) kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecti1200 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecti1200 This is METAFONT, Version 2.71828182 (TeX Live 2022/dev/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecti1200.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecti.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/extextit.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exileast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exilwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exilig.mf Ok [25] [26] [27] [28] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exitalp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exillett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exidigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exiligtb.mf Ok) ) ) ) (some charht values had to be adjusted by as much as 0.07143pt) Font metrics written on ecti1200.tfm. Output written on ecti1200.600gf (256 characters, 63048 bytes). Transcript written on ecti1200.log. mktexpk: /<>/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ecti1200.600pk: successfully generated. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. Package rerunfilecheck Warning: File `ProbABEL_manual.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) >/pr obabel-0.5.0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-v ar/fonts/pk/ljfour/jknappen/ec/ecti1200.600pk> kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ectt1095 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ectt1095 This is METAFONT, Version 2.71828182 (TeX Live 2022/dev/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt1095.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exmligtb.mf Ok) ) ) ) Font metrics written on ectt1095.tfm. Output written on ectt1095.600gf (256 characters, 47796 bytes). Transcript written on ectt1095.log. mktexpk: /<>/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ectt1095.600pk: successfully generated. >/probabel -0.5.0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fon ts/pk/ljfour/jknappen/ec/ectt1095.600pk> kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ectt1440 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ectt1440 This is METAFONT, Version 2.71828182 (TeX Live 2022/dev/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt1440.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exmligtb.mf Ok) ) ) ) Font metrics written on ectt1440.tfm. Output written on ectt1440.600gf (256 characters, 61024 bytes). Transcript written on ectt1440.log. mktexpk: /<>/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ectt1440.600pk: successfully generated. >/probabel-0.5.0 +dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ ljfour/jknappen/ec/ectt1440.600pk> kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecrm1000 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecrm1000 This is METAFONT, Version 2.71828182 (TeX Live 2022/dev/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm1000.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrligtb.mf Ok) ) ) ) (some charht values had to be adjusted by as much as 0.06586pt) Font metrics written on ecrm1000.tfm. Output written on ecrm1000.600gf (256 characters, 51184 bytes). Transcript written on ecrm1000.log. mktexpk: /<>/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ecrm1000.600pk: successfully generated. >/ debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour /jknappen/ec/ecrm1000.600pk> kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecrm0700 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecrm0700 This is METAFONT, Version 2.71828182 (TeX Live 2022/dev/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm0700.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrligtb.mf Ok) ) ) ) Font metrics written on ecrm0700.tfm. Output written on ecrm0700.600gf (256 characters, 37344 bytes). Transcript written on ecrm0700.log. mktexpk: /<>/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ecrm0700.600pk: successfully generated. >/debian /.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknap pen/ec/ecrm0700.600pk> kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ectt0800 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ectt0800 This is METAFONT, Version 2.71828182 (TeX Live 2022/dev/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt0800.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exmligtb.mf Ok) ) ) ) Font metrics written on ectt0800.tfm. Output written on ectt0800.600gf (256 characters, 35488 bytes). Transcript written on ectt0800.log. mktexpk: /<>/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ectt0800.600pk: successfully generated. >/debian/.debh elper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec /ectt0800.600pk> kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecbx1200 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecbx1200 This is METAFONT, Version 2.71828182 (TeX Live 2022/dev/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecbx1200.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecbx.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrligtb.mf Ok) ) ) ) Font metrics written on ecbx1200.tfm. Output written on ecbx1200.600gf (256 characters, 59220 bytes). Transcript written on ecbx1200.log. mktexpk: /<>/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ecbx1200.600pk: successfully generated. >/debian/.debhelper/ generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ecbx1 200.600pk> kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecrm0800 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecrm0800 This is METAFONT, Version 2.71828182 (TeX Live 2022/dev/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm0800.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrligtb.mf Ok) ) ) ) (some charht values had to be adjusted by as much as 0.06445pt) Font metrics written on ecrm0800.tfm. Output written on ecrm0800.600gf (256 characters, 41732 bytes). Transcript written on ecrm0800.log. mktexpk: /<>/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ecrm0800.600pk: successfully generated. >/debian/.debhelper/genera ted/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ecrm0800.60 0pk> kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ectt1000 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ectt1000 This is METAFONT, Version 2.71828182 (TeX Live 2022/dev/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt1000.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exmligtb.mf Ok) ) ) ) Font metrics written on ectt1000.tfm. Output written on ectt1000.600gf (256 characters, 43832 bytes). Transcript written on ectt1000.log. mktexpk: /<>/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ectt1000.600pk: successfully generated. >/debian/.debhelper/generated/_s ource/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ectt1000.600pk> kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 tcrm1200 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input tcrm1200 This is METAFONT, Version 2.71828182 (TeX Live 2022/dev/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tcrm1200.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tcrm.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymb.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txpseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [27] [29]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txgen.mf Ok [100] [109] [98] [99] [108]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymbol.mf Ok [13] [18] [21] [22] [23] [24] [25] [26] [28] [31] [32] [36] [39] [44] [45] [46] [42] [47] [60] [61] [62] [77] [79] [87] [110] [91] [93] [94] [95] [96] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [171] [172] [173] [174] [175] [177] [176] [180] [181] [182] [183] [184] [187] [191] [214] [246]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txromod.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrsuper.mf Ok [185] [178] [179] [170] [186]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrfract.mf Ok [188] [189] [190]) ) ) ) (some charht values had to be adjusted by as much as 0.06665pt) Font metrics written on tcrm1200.tfm. Output written on tcrm1200.600gf (128 characters, 28032 bytes). Transcript written on tcrm1200.log. mktexpk: /<>/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/tcrm1200.600pk: successfully generated. < /<>/debian/.debhelper/generated/_source/ home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/tcrm1200.600pk> kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecbx1440 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecbx1440 This is METAFONT, Version 2.71828182 (TeX Live 2022/dev/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecbx1440.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecbx.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrligtb.mf Ok) ) ) ) (some charht values had to be adjusted by as much as 0.10997pt) Font metrics written on ecbx1440.tfm. Output written on ecbx1440.600gf (256 characters, 70764 bytes). Transcript written on ecbx1440.log. mktexpk: /<>/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ecbx1440.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ectt1728 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ectt1728 This is METAFONT, Version 2.71828182 (TeX Live 2022/dev/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt1728.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exmligtb.mf Ok) ) ) ) Font metrics written on ectt1728.tfm. Output written on ectt1728.600gf (256 characters, 72884 bytes). Transcript written on ectt1728.log. mktexpk: /<>/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ectt1728.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ectt1200 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ectt1200 This is METAFONT, Version 2.71828182 (TeX Live 2022/dev/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt1200.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ectt.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exmligtb.mf Ok) ) ) ) Font metrics written on ectt1200.tfm. Output written on ectt1200.600gf (256 characters, 51736 bytes). Transcript written on ectt1200.log. mktexpk: /<>/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ectt1200.600pk: successfully generated. kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecrm1200 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecrm1200 This is METAFONT, Version 2.71828182 (TeX Live 2022/dev/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm1200.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrligtb.mf Ok) ) ) ) (some charht values had to be adjusted by as much as 0.07143pt) Font metrics written on ecrm1200.tfm. Output written on ecrm1200.600gf (256 characters, 60320 bytes). Transcript written on ecrm1200.log. mktexpk: /<>/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ecrm1200.600pk: successfully generated. >/p robabel-0.5.0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf- var/fonts/pk/ljfour/jknappen/ec/ecrm1200.600pk> kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecbx1728 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecbx1728 This is METAFONT, Version 2.71828182 (TeX Live 2022/dev/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecbx1728.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecbx.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrligtb.mf Ok) ) ) ) (some charht values had to be adjusted by as much as 0.13197pt) Font metrics written on ecbx1728.tfm. Output written on ecbx1728.600gf (256 characters, 84848 bytes). Transcript written on ecbx1728.log. mktexpk: /<>/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ecbx1728.600pk: successfully generated. >/probabe l-0.5.0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fo nts/pk/ljfour/jknappen/ec/ecbx1728.600pk> kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecrm1095 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecrm1095 This is METAFONT, Version 2.71828182 (TeX Live 2022/dev/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm1095.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrligtb.mf Ok) ) ) ) (some charht values had to be adjusted by as much as 0.07599pt) Font metrics written on ecrm1095.tfm. Output written on ecrm1095.600gf (256 characters, 55424 bytes). Transcript written on ecrm1095.log. mktexpk: /<>/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ecrm1095.600pk: successfully generated. >/probabel-0.5. 0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk /ljfour/jknappen/ec/ecrm1095.600pk> kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecrm1440 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecrm1440 This is METAFONT, Version 2.71828182 (TeX Live 2022/dev/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm1440.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecrm.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exroman.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrleast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrlig.mf Ok [25] [26] [28] [27] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exromp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrllett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrdigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrligtb.mf Ok) ) ) ) (some charht values had to be adjusted by as much as 0.08084pt) Font metrics written on ecrm1440.tfm. Output written on ecrm1440.600gf (256 characters, 71064 bytes). Transcript written on ecrm1440.log. mktexpk: /<>/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ecrm1440.600pk: successfully generated. > /debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfou r/jknappen/ec/ecrm1440.600pk> kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 ecti1440 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input ecti1440 This is METAFONT, Version 2.71828182 (TeX Live 2022/dev/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecti1440.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/ecti.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/extextit.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exileast.mf Ok [158] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exilwest.mf Ok [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exruwest.mf Ok [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrueast.mf Ok [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbraces.mf Ok [94] [126] [23] [40] [41] [60] [124] [62] [91] [93] [92] [123] [125] [95] [127] [32]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/expunct.mf Ok [14] [15] [19] [20] [13] [18] [33] [39] [42] [43] [44] [46] [47] [58] [59] [61] [96] [189] [17] [45] [16] [21] [22]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exsign.mf Ok [24] [34] [35] [36] [37] [64] [191] [159]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exilig.mf Ok [25] [26] [27] [28] [29] [30] [31]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exitalp.mf Ok [38] [63] [190]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exrulett.mf Ok [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exillett.mf Ok [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exidigit.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exiligtb.mf Ok) ) ) ) (some charht values had to be adjusted by as much as 0.07997pt) Font metrics written on ecti1440.tfm. 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Output written on ecrm2074.600gf (256 characters, 101464 bytes). Transcript written on ecrm2074.log. mktexpk: /<>/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ecrm2074.600pk: successfully generated. >/debian/.deb helper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/e c/ecrm2074.600pk> Output written on ProbABEL_manual.pdf (22 pages, 410535 bytes). Transcript written on ProbABEL_manual.log. diff: .btmp: No such file or directory === Making PDF === pdflatex ./ProbABEL_manual.tex This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2022/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./ProbABEL_manual.tex LaTeX2e <2021-11-15> patch level 1 L3 programming layer <2021-11-22> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2021/10/04 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size12.clo)) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/svgnam.def)) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) (/usr/share/texlive/texmf-dist/tex/latex/titleref/titleref.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. 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[4] Overfull \hbox (123.30513pt too wide) in paragraph at lines 238--241 \T1/cmtt/m/n/12 ProbABEL\T1/cmr/m/n/12 . Let's in-stall in a sub-di-rec-tory of your home di-rec-tory, e.g. \T1/cmtt/m/n/12 /home/yourusername/ProbABEL\T1/cmr /m/n/12 : Overfull \hbox (4.73831pt too wide) in paragraph at lines 268--272 []\T1/cmr/m/n/12 If all went well you will find the ex-e-cutable pro-grams (\T1 /cmtt/m/n/12 palinear\T1/cmr/m/n/12 , \T1/cmtt/m/n/12 palogist\T1/cmr/m/n/12 , [5] Overfull \hbox (1.38382pt too wide) in paragraph at lines 274--279 \T1/cmtt/m/n/12 ProbABEL \T1/cmr/m/n/12 takes three files as in-put: a file con -tain-ing SNP in-for-ma-tion (e.g. the [6] [7] Overfull \hbox (12.56972pt too wide) in paragraph at lines 377--384 []\T1/cmr/m/n/12 In the case of lin-ear or lo-gis-tic re-gres-sion (pro-grams \ T1/cmtt/m/n/12 palinear \T1/cmr/m/n/12 and \T1/cmtt/m/n/12 palogist\T1/cmr/m/n/ 12 , Overfull \hbox (14.44846pt too wide) in paragraph at lines 377--384 \T1/cmr/m/n/12 lin-ear re-gres-sion anal-y-sis fol-low here (also to be found i n \T1/cmtt/m/n/12 examples/height.txt\T1/cmr/m/n/12 ) [8] [9] Overfull \hbox (5.0841pt too wide) in paragraph at lines 454--458 []\T1/cmr/m/n/12 There are in to-tal 11 com-mand line op-tions you can spec-ify to the \T1/cmtt/m/n/12 ProbABEL [10] [11] Overfull \hbox (17.4505pt too wide) in paragraph at lines 512--512 []\T1/cmtt/m/n/12 palinear -p height.txt -d gtdata/test.mldose -i gtdata/test.m linfo[] Overfull \hbox (29.79749pt too wide) in paragraph at lines 535--535 []\T1/cmtt/m/n/12 palinear -p height.txt -d gtdata/test.mlprob -i gtdata/test.m linfo \[] Overfull \hbox (54.49146pt too wide) in paragraph at lines 545--545 []\T1/cmtt/m/n/12 palinear -p height.txt -d gtdata/test.mlprob.fvi -i gtdata/te st.mlinfo \[] Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\lstinline' on input line 550. Overfull \hbox (8.43651pt too wide) in paragraph at lines 552--563 \T1/cmr/m/n/12 covariance ma-trix goes as in-put pa-ram-e-ter with that op-tion , e.g. [][][][] [12] Overfull \hbox (42.14447pt too wide) in paragraph at lines 569--569 [] \T1/cmtt/m/n/12 h2.obj$InvSigma * h2.obj$h2an$estimate[length(h2.obj$h2an$e stimate)][] Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\lstinline' on input line 585. [13] Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\lstinline' on input line 626. Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\lstinline' on input line 643. Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\lstinline' on input line 662. [14] [15] Overfull \hbox (4.6171pt too wide) in paragraph at lines 746--750 \T1/cmr/m/n/12 After in-stalling \T1/cmtt/m/n/12 ProbABEL \T1/cmr/m/n/12 you ca n find the \T1/cmtt/m/n/12 prepare_data.R \T1/cmr/m/n/12 file in the \T1/cmtt/m /n/12 scripts [16] [17] Overfull \hbox (8.33644pt too wide) in paragraph at lines 848--850 []\T1/cmr/m/n/12 Secondly, the Wald test can be used; for that the in-verse var iance-covariance [18] [19] [20] [21] [22] No file ProbABEL_manual.ind. [23] (./ProbABEL_manual.aux) LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) >/pr obabel-0.5.0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-v ar/fonts/pk/ljfour/jknappen/ec/ecti1200.600pk> >/probabel -0.5.0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fon ts/pk/ljfour/jknappen/ec/ectt1095.600pk> >/probabel-0.5.0 +dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ ljfour/jknappen/ec/ectt1440.600pk> >/ debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour /jknappen/ec/ecrm1000.600pk> >/debian /.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknap pen/ec/ecrm0700.600pk> >/debian/.debh elper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec /ectt0800.600pk> >/debian/.debhelper/ generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ecrm0 800.600pk> >/debian/.debhelper/genera ted/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ectt1000.60 0pk> >/debian/.debhelper/generated/_s ource/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/tcrm1200.600pk> < /<>/debian/.debhelper/generated/_source/ home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ecbx1440.600pk> >/p robabel-0.5.0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf- var/fonts/pk/ljfour/jknappen/ec/ecbx1200.600pk> >/probabe l-0.5.0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fo nts/pk/ljfour/jknappen/ec/ecbx1728.600pk> >/probabel-0.5. 0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk /ljfour/jknappen/ec/ecrm1095.600pk> > /debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfou r/jknappen/ec/ecrm1440.600pk> >/debia n/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jkna ppen/ec/ecti1440.600pk> >/debian/.deb helper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/e c/ecrm2074.600pk> Output written on ProbABEL_manual.pdf (23 pages, 417320 bytes). Transcript written on ProbABEL_manual.log. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ** Re-running LaTeX ** This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2022/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./ProbABEL_manual.tex LaTeX2e <2021-11-15> patch level 1 L3 programming layer <2021-11-22> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2021/10/04 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size12.clo)) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/svgnam.def)) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) (/usr/share/texlive/texmf-dist/tex/latex/titleref/titleref.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref-langpatches.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) Writing index file ProbABEL_manual.idx (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) (./ProbABEL_manual.aux) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty)) (./ProbABEL_manual.out) (./ProbABEL_manual.out) (./ProbABEL_manual.toc (/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd) [1{/var/lib/texmf/font s/map/pdftex/updmap/pdftex.map}]) [2] [3] Overfull \hbox (7.36137pt too wide) in paragraph at lines 171--174 \T1/cmr/m/n/12 Prob-A-BEL web page ([][]$\T1/cmtt/m/n/12 http : / / www . genab el . org / packages / ProbABEL$[][]\T1/cmr/m/n/12 ). [4] Overfull \hbox (123.30513pt too wide) in paragraph at lines 238--241 \T1/cmtt/m/n/12 ProbABEL\T1/cmr/m/n/12 . Let's in-stall in a sub-di-rec-tory of your home di-rec-tory, e.g. \T1/cmtt/m/n/12 /home/yourusername/ProbABEL\T1/cmr /m/n/12 : Overfull \hbox (4.73831pt too wide) in paragraph at lines 268--272 []\T1/cmr/m/n/12 If all went well you will find the ex-e-cutable pro-grams (\T1 /cmtt/m/n/12 palinear\T1/cmr/m/n/12 , \T1/cmtt/m/n/12 palogist\T1/cmr/m/n/12 , [5] Overfull \hbox (1.38382pt too wide) in paragraph at lines 274--279 \T1/cmtt/m/n/12 ProbABEL \T1/cmr/m/n/12 takes three files as in-put: a file con -tain-ing SNP in-for-ma-tion (e.g. the [6] [7] Overfull \hbox (12.56972pt too wide) in paragraph at lines 377--384 []\T1/cmr/m/n/12 In the case of lin-ear or lo-gis-tic re-gres-sion (pro-grams \ T1/cmtt/m/n/12 palinear \T1/cmr/m/n/12 and \T1/cmtt/m/n/12 palogist\T1/cmr/m/n/ 12 , Overfull \hbox (14.44846pt too wide) in paragraph at lines 377--384 \T1/cmr/m/n/12 lin-ear re-gres-sion anal-y-sis fol-low here (also to be found i n \T1/cmtt/m/n/12 examples/height.txt\T1/cmr/m/n/12 ) [8] [9] Overfull \hbox (5.0841pt too wide) in paragraph at lines 454--458 []\T1/cmr/m/n/12 There are in to-tal 11 com-mand line op-tions you can spec-ify to the \T1/cmtt/m/n/12 ProbABEL [10] [11] Overfull \hbox (17.4505pt too wide) in paragraph at lines 512--512 []\T1/cmtt/m/n/12 palinear -p height.txt -d gtdata/test.mldose -i gtdata/test.m linfo[] Overfull \hbox (29.79749pt too wide) in paragraph at lines 535--535 []\T1/cmtt/m/n/12 palinear -p height.txt -d gtdata/test.mlprob -i gtdata/test.m linfo \[] Overfull \hbox (54.49146pt too wide) in paragraph at lines 545--545 []\T1/cmtt/m/n/12 palinear -p height.txt -d gtdata/test.mlprob.fvi -i gtdata/te st.mlinfo \[] Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\lstinline' on input line 550. Overfull \hbox (8.43651pt too wide) in paragraph at lines 552--563 \T1/cmr/m/n/12 covariance ma-trix goes as in-put pa-ram-e-ter with that op-tion , e.g. [][][][] [12] Overfull \hbox (42.14447pt too wide) in paragraph at lines 569--569 [] \T1/cmtt/m/n/12 h2.obj$InvSigma * h2.obj$h2an$estimate[length(h2.obj$h2an$e stimate)][] Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\lstinline' on input line 585. [13] Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\lstinline' on input line 626. Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\lstinline' on input line 643. Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\lstinline' on input line 662. [14] [15] Overfull \hbox (4.6171pt too wide) in paragraph at lines 746--750 \T1/cmr/m/n/12 After in-stalling \T1/cmtt/m/n/12 ProbABEL \T1/cmr/m/n/12 you ca n find the \T1/cmtt/m/n/12 prepare_data.R \T1/cmr/m/n/12 file in the \T1/cmtt/m /n/12 scripts [16] [17] Overfull \hbox (8.33644pt too wide) in paragraph at lines 848--850 []\T1/cmr/m/n/12 Secondly, the Wald test can be used; for that the in-verse var iance-covariance [18] [19] [20] [21] [22] No file ProbABEL_manual.ind. [23] (./ProbABEL_manual.aux) ) (see the transcript file for additional information) >/pr obabel-0.5.0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-v ar/fonts/pk/ljfour/jknappen/ec/ecti1200.600pk> >/probabel -0.5.0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fon ts/pk/ljfour/jknappen/ec/ectt1095.600pk> >/probabel-0.5.0 +dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ ljfour/jknappen/ec/ectt1440.600pk> >/ debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour /jknappen/ec/ecrm1000.600pk> >/debian /.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknap pen/ec/ecrm0700.600pk> >/debian/.debh elper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec /ectt0800.600pk> >/debian/.debhelper/ generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ecrm0 800.600pk> >/debian/.debhelper/genera ted/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ectt1000.60 0pk> >/debian/.debhelper/generated/_s ource/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/tcrm1200.600pk> < /<>/debian/.debhelper/generated/_source/ home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ecbx1440.600pk> >/p robabel-0.5.0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf- var/fonts/pk/ljfour/jknappen/ec/ecbx1200.600pk> >/probabe l-0.5.0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fo nts/pk/ljfour/jknappen/ec/ecbx1728.600pk> >/probabel-0.5. 0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk /ljfour/jknappen/ec/ecrm1095.600pk> > /debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfou r/jknappen/ec/ecrm1440.600pk> >/debia n/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jkna ppen/ec/ecti1440.600pk> >/debian/.deb helper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/e c/ecrm2074.600pk> Output written on ProbABEL_manual.pdf (23 pages, 417320 bytes). Transcript written on ProbABEL_manual.log. === Making index === makeindex ProbABEL_manual This is makeindex, version 2.15 [TeX Live 2022/dev] (kpathsea + Thai support). Scanning input file ProbABEL_manual.idx....done (3 entries accepted, 0 rejected). Sorting entries....done (4 comparisons). Generating output file ProbABEL_manual.ind....done (14 lines written, 0 warnings). Output written in ProbABEL_manual.ind. Transcript written in ProbABEL_manual.ilg. === Making final PDF === pdflatex ./ProbABEL_manual.tex This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2022/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./ProbABEL_manual.tex LaTeX2e <2021-11-15> patch level 1 L3 programming layer <2021-11-22> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2021/10/04 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size12.clo)) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/svgnam.def)) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) (/usr/share/texlive/texmf-dist/tex/latex/titleref/titleref.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref-langpatches.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) Writing index file ProbABEL_manual.idx (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) (./ProbABEL_manual.aux) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty)) (./ProbABEL_manual.out) (./ProbABEL_manual.out) (./ProbABEL_manual.toc (/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd) [1{/var/lib/texmf/font s/map/pdftex/updmap/pdftex.map}]) [2] [3] Overfull \hbox (7.36137pt too wide) in paragraph at lines 171--174 \T1/cmr/m/n/12 Prob-A-BEL web page ([][]$\T1/cmtt/m/n/12 http : / / www . genab el . org / packages / ProbABEL$[][]\T1/cmr/m/n/12 ). [4] Overfull \hbox (123.30513pt too wide) in paragraph at lines 238--241 \T1/cmtt/m/n/12 ProbABEL\T1/cmr/m/n/12 . Let's in-stall in a sub-di-rec-tory of your home di-rec-tory, e.g. \T1/cmtt/m/n/12 /home/yourusername/ProbABEL\T1/cmr /m/n/12 : Overfull \hbox (4.73831pt too wide) in paragraph at lines 268--272 []\T1/cmr/m/n/12 If all went well you will find the ex-e-cutable pro-grams (\T1 /cmtt/m/n/12 palinear\T1/cmr/m/n/12 , \T1/cmtt/m/n/12 palogist\T1/cmr/m/n/12 , [5] Overfull \hbox (1.38382pt too wide) in paragraph at lines 274--279 \T1/cmtt/m/n/12 ProbABEL \T1/cmr/m/n/12 takes three files as in-put: a file con -tain-ing SNP in-for-ma-tion (e.g. the [6] [7] Overfull \hbox (12.56972pt too wide) in paragraph at lines 377--384 []\T1/cmr/m/n/12 In the case of lin-ear or lo-gis-tic re-gres-sion (pro-grams \ T1/cmtt/m/n/12 palinear \T1/cmr/m/n/12 and \T1/cmtt/m/n/12 palogist\T1/cmr/m/n/ 12 , Overfull \hbox (14.44846pt too wide) in paragraph at lines 377--384 \T1/cmr/m/n/12 lin-ear re-gres-sion anal-y-sis fol-low here (also to be found i n \T1/cmtt/m/n/12 examples/height.txt\T1/cmr/m/n/12 ) [8] [9] Overfull \hbox (5.0841pt too wide) in paragraph at lines 454--458 []\T1/cmr/m/n/12 There are in to-tal 11 com-mand line op-tions you can spec-ify to the \T1/cmtt/m/n/12 ProbABEL [10] [11] Overfull \hbox (17.4505pt too wide) in paragraph at lines 512--512 []\T1/cmtt/m/n/12 palinear -p height.txt -d gtdata/test.mldose -i gtdata/test.m linfo[] Overfull \hbox (29.79749pt too wide) in paragraph at lines 535--535 []\T1/cmtt/m/n/12 palinear -p height.txt -d gtdata/test.mlprob -i gtdata/test.m linfo \[] Overfull \hbox (54.49146pt too wide) in paragraph at lines 545--545 []\T1/cmtt/m/n/12 palinear -p height.txt -d gtdata/test.mlprob.fvi -i gtdata/te st.mlinfo \[] Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\lstinline' on input line 550. Overfull \hbox (8.43651pt too wide) in paragraph at lines 552--563 \T1/cmr/m/n/12 covariance ma-trix goes as in-put pa-ram-e-ter with that op-tion , e.g. [][][][] [12] Overfull \hbox (42.14447pt too wide) in paragraph at lines 569--569 [] \T1/cmtt/m/n/12 h2.obj$InvSigma * h2.obj$h2an$estimate[length(h2.obj$h2an$e stimate)][] Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\lstinline' on input line 585. [13] Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\lstinline' on input line 626. Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\lstinline' on input line 643. Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\lstinline' on input line 662. [14] [15] Overfull \hbox (4.6171pt too wide) in paragraph at lines 746--750 \T1/cmr/m/n/12 After in-stalling \T1/cmtt/m/n/12 ProbABEL \T1/cmr/m/n/12 you ca n find the \T1/cmtt/m/n/12 prepare_data.R \T1/cmr/m/n/12 file in the \T1/cmtt/m /n/12 scripts [16] [17] Overfull \hbox (8.33644pt too wide) in paragraph at lines 848--850 []\T1/cmr/m/n/12 Secondly, the Wald test can be used; for that the in-verse var iance-covariance [18] [19] [20] [21] [22] (./ProbABEL_manual.ind [23] [24]) (./ProbABEL_manual.aux) ) (see the transcript file for additional information) >/pr obabel-0.5.0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-v ar/fonts/pk/ljfour/jknappen/ec/ecti1200.600pk> >/probabel -0.5.0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fon ts/pk/ljfour/jknappen/ec/ectt1095.600pk> >/probabel-0.5.0 +dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ ljfour/jknappen/ec/ectt1440.600pk> >/ debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour /jknappen/ec/ecrm1000.600pk> >/debian /.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknap pen/ec/ecrm0700.600pk> >/debian/.debh elper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec /ectt0800.600pk> >/debian/.debhelper/ generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ecrm0 800.600pk> >/debian/.debhelper/genera ted/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ectt1000.60 0pk> >/debian/.debhelper/generated/_s ource/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/tcrm1200.600pk> < /<>/debian/.debhelper/generated/_source/ home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/ec/ecbx1440.600pk> >/p robabel-0.5.0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf- var/fonts/pk/ljfour/jknappen/ec/ecbx1200.600pk> >/probabe l-0.5.0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fo nts/pk/ljfour/jknappen/ec/ecbx1728.600pk> >/probabel-0.5. 0+dfsg/debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk /ljfour/jknappen/ec/ecrm1095.600pk> > /debian/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfou r/jknappen/ec/ecrm1440.600pk> >/debia n/.debhelper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jkna ppen/ec/ecti1440.600pk> >/debian/.deb helper/generated/_source/home/.texlive2021/texmf-var/fonts/pk/ljfour/jknappen/e c/ecrm2074.600pk> Output written on ProbABEL_manual.pdf (24 pages, 418264 bytes). Transcript written on ProbABEL_manual.log. rm ProbABEL_manual.aux make[2]: Leaving directory '/<>/doc' Making all in checks make[2]: Entering directory '/<>/checks' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/<>/checks' Making all in examples make[2]: Entering directory '/<>/examples' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/<>/examples' Making all in checks/R-tests make[2]: Entering directory '/<>/checks/R-tests' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/<>/checks/R-tests' make[2]: Entering directory '/<>' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/probabel-0.5.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in src make[2]: Entering directory '/<>/src' make[3]: Entering directory '/<>/src' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/install -c palinear palogist pacoxph '/<>/debian/tmp/usr/bin' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/install -c probabel '/<>/debian/tmp/usr/bin' /bin/mkdir -p '/<>/debian/tmp/etc' /usr/bin/install -c -m 644 probabel_config.cfg.example '/<>/debian/tmp/etc' make install-exec-hook make[4]: Entering directory '/<>/src' /bin/sed -i -e "s;probabel_config.cfg;/etc/probabel_config.cfg;" \ /<>/debian/tmp/usr/bin/probabel /bin/sed -i -e "s;\./;/usr/bin/;" /<>/debian/tmp/usr/bin/probabel /bin/sed -i -e "s;PROBABEL_VERSION;0.5.0;" /<>/debian/tmp/usr/bin/probabel ln -s /<>/debian/tmp/usr/bin/probabel /<>/debian/tmp/usr/bin/probabel.pl make[4]: Leaving directory '/<>/src' /bin/mkdir -p '/<>/debian/tmp/usr/share/probabel/scripts' /usr/bin/install -c -m 644 prepare_data.R extIDS.pl '/<>/debian/tmp/usr/share/probabel/scripts' make install-data-hook make[4]: Entering directory '/<>/src' chmod a+rx /<>/debian/tmp//usr/share/probabel/scripts/extIDS.pl make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' Making install in doc make[2]: Entering directory '/<>/doc' make[3]: Entering directory '/<>/doc' make[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/debian/tmp/usr/share/doc/probabel' /usr/bin/install -c -m 644 ProbABEL_manual.tex QuickStart.txt short_coxph_data.txt short_height_base_add.out.txt.save short_height.txt short_logist_data.txt short_test.mldose test.map test.mlinfo test_regression.R COPYING LICENSE INSTALL ChangeLog TODO '/<>/debian/tmp/usr/share/doc/probabel' /bin/mkdir -p '/<>/debian/tmp/usr/share/doc/probabel' /usr/bin/install -c -m 644 ProbABEL_manual.pdf '/<>/debian/tmp/usr/share/doc/probabel' /bin/mkdir -p '/<>/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 probabel.1 probabel.pl.1 palinear.1 palogist.1 pacoxph.1 '/<>/debian/tmp/usr/share/man/man1' make[3]: Leaving directory '/<>/doc' make[2]: Leaving directory '/<>/doc' Making install in checks make[2]: Entering directory '/<>/checks' make[3]: Entering directory '/<>/checks' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/checks' make[2]: Leaving directory '/<>/checks' Making install in examples make[2]: Entering directory '/<>/examples' make[3]: Entering directory '/<>/examples' make[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/debian/tmp/usr/share/probabel/examples' /usr/bin/install -c -m 644 height.txt logist_data.txt mmscore_pheno.PHE coxph_data.txt mmscore.R mmscore_InvSigma_aj.sex.age.dat README '/<>/debian/tmp/usr/share/probabel/examples' /bin/mkdir -p '/<>/debian/tmp/usr/share/probabel/examples' /usr/bin/install -c example_qt.sh example_bt.sh example_cox.sh example_mmscore.sh '/<>/debian/tmp/usr/share/probabel/examples' /bin/mkdir -p '/<>/debian/tmp/usr/share/probabel/examples/gtdata' /usr/bin/install -c -m 644 gtdata/test.mldose gtdata/test.mlprob gtdata/test.mlinfo gtdata/test.map gtdata/test.dose.fvi gtdata/test.dose.fvd gtdata/test.prob.fvi gtdata/test.prob.fvd gtdata/mmscore_gen.mlinfo gtdata/mmscore_gen.mldose gtdata/mmscore_gen.mlprob gtdata/mmscore_gen.dose.fvi gtdata/mmscore_gen.dose.fvd gtdata/mmscore_gen.prob.fvi gtdata/mmscore_gen.prob.fvd '/<>/debian/tmp/usr/share/probabel/examples/gtdata' make[3]: Leaving directory '/<>/examples' make[2]: Leaving directory '/<>/examples' Making install in checks/R-tests make[2]: Entering directory '/<>/checks/R-tests' make[3]: Entering directory '/<>/checks/R-tests' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/checks/R-tests' make[2]: Leaving directory '/<>/checks/R-tests' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install-arch make[1]: Entering directory '/<>' dh_install -a rm debian/probabel/usr/bin/probabel.pl mv debian/probabel/etc/probabel_config.cfg.example debian/probabel/etc/probabel_config.cfg make[1]: Leaving directory '/<>' debian/rules override_dh_installdocs-arch make[1]: Entering directory '/<>' dh_installdocs -a rm debian/probabel/usr/share/doc/probabel/COPYING rm debian/probabel/usr/share/doc/probabel/INSTALL rm debian/probabel/usr/share/doc/probabel/LICENSE rm debian/probabel/usr/share/doc/probabel/ChangeLog make[1]: Leaving directory '/<>' debian/rules override_dh_installchangelogs make[1]: Entering directory '/<>' dh_installchangelogs doc/ChangeLog make[1]: Leaving directory '/<>' dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'probabel' in '../probabel_0.5.0+dfsg-5_amd64.deb'. dpkg-deb: building package 'probabel-dbgsym' in '../probabel-dbgsym_0.5.0+dfsg-5_amd64.deb'. dpkg-genbuildinfo --build=any -O../probabel_0.5.0+dfsg-5_amd64.buildinfo dpkg-genchanges --build=any -O../probabel_0.5.0+dfsg-5_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2022-01-21T10:27:20Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ probabel_0.5.0+dfsg-5_amd64.changes: ------------------------------------ Format: 1.8 Date: Tue, 18 Jan 2022 16:32:14 +0100 Source: probabel Binary: probabel probabel-dbgsym Built-For-Profiles: cross nocheck Architecture: amd64 Version: 0.5.0+dfsg-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: probabel - Toolset for Genome-Wide Association Analysis Changes: probabel (0.5.0+dfsg-5) unstable; urgency=medium . * Fix watchfile to detect new versions on github * Standards-Version: 4.6.0 (routine-update) * Apply multi-arch hints. + probabel-examples: Add Multi-Arch: foreign. * Build-Depends: r-cran-survival * Build-time test issue reported at https://github.com/GenABEL-Project/ProbABEL/issues/47 is ignored when building the package * Add missing build dependency on dh addon. 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+------------------------------------------------------------------------------+ Format: 1.0 Source: probabel Binary: probabel probabel-dbgsym Architecture: amd64 Version: 0.5.0+dfsg-5 Checksums-Md5: 14fbf666ef94439942153635ca8ca9de 8139324 probabel-dbgsym_0.5.0+dfsg-5_amd64.deb cec68821db7f3b6901562cc419269e79 597856 probabel_0.5.0+dfsg-5_amd64.deb Checksums-Sha1: 3e1ddf682ed22de6c85c1b64626749e484550ce8 8139324 probabel-dbgsym_0.5.0+dfsg-5_amd64.deb a01310c8e70aa5a4214e45118b49da52c58b307c 597856 probabel_0.5.0+dfsg-5_amd64.deb Checksums-Sha256: 057d6fe62b3d18fc5f9cfa085fa6a0e993880bd3222819cdfdec6c20fc7a9b40 8139324 probabel-dbgsym_0.5.0+dfsg-5_amd64.deb 87fdc173fc1071c7fefdeed1d5055a39d3e003a01d606e328ac9445fbb56a026 597856 probabel_0.5.0+dfsg-5_amd64.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Fri, 21 Jan 2022 10:27:19 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.71-2), automake (= 1:1.16.5-1.1), autopoint (= 0.21-4), autotools-dev (= 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3.4.2-4), libfile-stripnondeterminism-perl (= 1.13.0-1), libfontbox-java (= 1:1.8.16-2), libfontconfig1 (= 2.13.1-4.2), libfreetype6 (= 2.11.1+dfsg-1), libgcc-11-dev (= 11.2.0-14), libgcc-s1 (= 11.2.0-14), libgcrypt20 (= 1.9.4-5), libgdbm-compat4 (= 1.22-1), libgdbm6 (= 1.22-1), libglib2.0-0 (= 2.70.2-1), libgmp10 (= 2:6.2.1+dfsg-3), libgomp1 (= 11.2.0-14), libgpg-error0 (= 1.43-3), libgraphite2-3 (= 1.3.14-1), libgssapi-krb5-2 (= 1.18.3-7), libharfbuzz0b (= 2.7.4-1), libice6 (= 2:1.0.10-1), libicu67 (= 67.1-7), libisl23 (= 0.24-2), libitm1 (= 11.2.0-14), libk5crypto3 (= 1.18.3-7), libkeyutils1 (= 1.6.1-2), libkpathsea6 (= 2021.20210626.59705-1), libkrb5-3 (= 1.18.3-7), libkrb5support0 (= 1.18.3-7), liblsan0 (= 11.2.0-14), liblz4-1 (= 1.9.3-2), liblzma5 (= 5.2.5-2), libmagic-mgc (= 1:5.41-2), libmagic1 (= 1:5.41-2), libmd0 (= 1.0.4-1), libmount1 (= 2.37.2-6), libmpc3 (= 1.2.1-1), libmpdec3 (= 2.5.1-2), libmpfr6 (= 4.1.0-3), libncursesw6 (= 6.3-2), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libpam-modules (= 1.4.0-11), libpam-modules-bin (= 1.4.0-11), libpam-runtime (= 1.4.0-11), libpam0g (= 1.4.0-11), libpaper-utils (= 1.1.28+b1), libpaper1 (= 1.1.28+b1), libpcre2-8-0 (= 10.39-3), libpcre3 (= 2:8.39-13), libpdfbox-java (= 1:1.8.16-2), libperl5.32 (= 5.32.1-6), libpipeline1 (= 1.5.5-1), libpixman-1-0 (= 0.40.0-1), libpng16-16 (= 1.6.37-3), libptexenc1 (= 2021.20210626.59705-1), libpython3-stdlib (= 3.9.8-1), libpython3.9-minimal (= 3.9.10-1), libpython3.9-stdlib (= 3.9.10-1), libquadmath0 (= 11.2.0-14), libreadline8 (= 8.1.2-1), libseccomp2 (= 2.5.3-2), libselinux1 (= 3.3-1+b1), libsigsegv2 (= 2.13-1), libsm6 (= 2:1.2.3-1), libsmartcols1 (= 2.37.2-6), libsqlite3-0 (= 3.37.2-2), libssl1.1 (= 1.1.1m-1), libstdc++-11-dev (= 11.2.0-14), libstdc++6 (= 11.2.0-14), libsub-override-perl (= 0.09-2), libsynctex2 (= 2021.20210626.59705-1), libsystemd0 (= 250.3-1), libteckit0 (= 2.5.11+ds1-1), libtexlua53 (= 2021.20210626.59705-1), libtinfo6 (= 6.3-2), libtirpc-common (= 1.3.2-2), libtirpc-dev (= 1.3.2-2), libtirpc3 (= 1.3.2-2), libtool (= 2.4.6-15), libtsan0 (= 11.2.0-14), libubsan1 (= 11.2.0-14), libuchardet0 (= 0.0.7-1), libudev1 (= 250.3-1), libunistring2 (= 0.9.10-6), libuuid1 (= 2.37.2-6), libx11-6 (= 2:1.7.2-2+b1), libx11-data (= 2:1.7.2-2), libxau6 (= 1:1.0.9-1), libxaw7 (= 2:1.0.13-1.1), libxcb-render0 (= 1.14-3), libxcb-shm0 (= 1.14-3), libxcb1 (= 1.14-3), libxdmcp6 (= 1:1.1.2-3), libxext6 (= 2:1.3.4-1), libxi6 (= 2:1.8-1), libxml2 (= 2.9.12+dfsg-5+b1), libxmu6 (= 2:1.1.2-2+b3), libxpm4 (= 1:3.5.12-1), libxrender1 (= 1:0.9.10-1), libxt6 (= 1:1.2.0-1), libzstd1 (= 1.4.8+dfsg-3), libzzip-0-13 (= 0.13.72+dfsg.1-1.1), linux-libc-dev (= 5.15.15-1), login (= 1:4.8.1-2), lsb-base (= 11.1.0), m4 (= 1.4.18-5), make (= 4.3-4.1), man-db (= 2.9.4-4), mawk (= 1.3.4.20200120-2), media-types (= 4.0.0), ncurses-base (= 6.3-2), ncurses-bin (= 6.3-2), patch (= 2.7.6-7), perl (= 5.32.1-6), perl-base (= 5.32.1-6), perl-modules-5.32 (= 5.32.1-6), pkg-config (= 0.29.2-1), po-debconf (= 1.0.21+nmu1), preview-latex-style (= 12.2-1), python3 (= 3.9.8-1), python3-minimal (= 3.9.8-1), python3.9 (= 3.9.10-1), python3.9-minimal (= 3.9.10-1), readline-common (= 8.1.2-1), rpcsvc-proto (= 1.4.2-4), sed (= 4.8-1), sensible-utils (= 0.0.17), sysvinit-utils (= 3.01-1), t1utils (= 1.41-4), tar (= 1.34+dfsg-1), tex-common (= 6.17), texlive-base (= 2021.20211217-1), texlive-binaries (= 2021.20210626.59705-1), texlive-fonts-recommended (= 2021.20211217-1), texlive-latex-base (= 2021.20211217-1), texlive-latex-extra (= 2021.20211217-1), texlive-latex-recommended (= 2021.20211217-1), texlive-pictures (= 2021.20211217-1), tzdata (= 2021e-1), ucf (= 3.0043), util-linux (= 2.37.2-6), x11-common (= 1:7.7+23), xdg-utils (= 1.1.3-4.1), xz-utils (= 5.2.5-2), zlib1g (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_GB.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1642519934" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ probabel-dbgsym_0.5.0+dfsg-5_amd64.deb -------------------------------------- new Debian package, version 2.0. size 8139324 bytes: control archive=696 bytes. 467 bytes, 12 lines control 403 bytes, 4 lines md5sums Package: probabel-dbgsym Source: probabel Version: 0.5.0+dfsg-5 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 8413 Depends: probabel (= 0.5.0+dfsg-5) Section: debug Priority: optional Description: debug symbols for probabel Build-Ids: 51744fe19f936c8ef98b7f7c8cadad6c97ba9858 5a84fcb6f1c616cfd8e1fb7adfa676338b58428c cfeddf200d7a7cd9365ca53f3d3f943cd2b50737 drwxr-xr-x root/root 0 2022-01-18 15:32 ./ drwxr-xr-x root/root 0 2022-01-18 15:32 ./usr/ drwxr-xr-x root/root 0 2022-01-18 15:32 ./usr/lib/ drwxr-xr-x root/root 0 2022-01-18 15:32 ./usr/lib/debug/ drwxr-xr-x root/root 0 2022-01-18 15:32 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2022-01-18 15:32 ./usr/lib/debug/.build-id/51/ -rw-r--r-- root/root 1922272 2022-01-18 15:32 ./usr/lib/debug/.build-id/51/744fe19f936c8ef98b7f7c8cadad6c97ba9858.debug drwxr-xr-x root/root 0 2022-01-18 15:32 ./usr/lib/debug/.build-id/5a/ -rw-r--r-- root/root 1922352 2022-01-18 15:32 ./usr/lib/debug/.build-id/5a/84fcb6f1c616cfd8e1fb7adfa676338b58428c.debug drwxr-xr-x root/root 0 2022-01-18 15:32 ./usr/lib/debug/.build-id/cf/ -rw-r--r-- root/root 2348256 2022-01-18 15:32 ./usr/lib/debug/.build-id/cf/eddf200d7a7cd9365ca53f3d3f943cd2b50737.debug drwxr-xr-x root/root 0 2022-01-18 15:32 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2022-01-18 15:32 ./usr/lib/debug/.dwz/x86_64-linux-gnu/ -rw-r--r-- root/root 2405232 2022-01-18 15:32 ./usr/lib/debug/.dwz/x86_64-linux-gnu/probabel.debug drwxr-xr-x root/root 0 2022-01-18 15:32 ./usr/share/ drwxr-xr-x root/root 0 2022-01-18 15:32 ./usr/share/doc/ lrwxrwxrwx root/root 0 2022-01-18 15:32 ./usr/share/doc/probabel-dbgsym -> probabel probabel_0.5.0+dfsg-5_amd64.deb ------------------------------- new Debian package, version 2.0. size 597856 bytes: control archive=1544 bytes. 25 bytes, 1 lines conffiles 608 bytes, 14 lines control 2081 bytes, 30 lines md5sums Package: probabel Version: 0.5.0+dfsg-5 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 1890 Depends: libc6 (>= 2.33), libgcc-s1 (>= 3.0), libstdc++6 (>= 11) Recommends: perl:any Section: science Priority: optional Homepage: http://www.genabel.org Description: Toolset for Genome-Wide Association Analysis The ProbABEL package is part of the GenABEL project for analysis of genome-wide data. ProbABEL is used to run GWAS. Using files in filevector/DatABEL format even allows for running GWAS on computers with only a few GB of RAM. drwxr-xr-x root/root 0 2022-01-18 15:32 ./ drwxr-xr-x root/root 0 2022-01-18 15:32 ./etc/ -rw-r--r-- root/root 1606 2022-01-18 15:32 ./etc/probabel_config.cfg drwxr-xr-x root/root 0 2022-01-18 15:32 ./usr/ drwxr-xr-x root/root 0 2022-01-18 15:32 ./usr/bin/ -rwxr-xr-x root/root 523288 2022-01-18 15:32 ./usr/bin/pacoxph -rwxr-xr-x root/root 486424 2022-01-18 15:32 ./usr/bin/palinear -rwxr-xr-x root/root 486424 2022-01-18 15:32 ./usr/bin/palogist -rwxr-xr-x root/root 12314 2022-01-18 15:32 ./usr/bin/probabel lrwxrwxrwx root/root 0 2022-01-18 15:32 ./usr/bin/probabel.pl -> probabel drwxr-xr-x root/root 0 2022-01-18 15:32 ./usr/share/ drwxr-xr-x root/root 0 2022-01-18 15:32 ./usr/share/doc-base/ -rw-r--r-- root/root 306 2022-01-18 15:32 ./usr/share/doc-base/probabel.probabel-manual drwxr-xr-x root/root 0 2022-01-18 15:32 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-01-18 15:32 ./usr/share/doc/probabel/ -rw-r--r-- root/root 345023 2022-01-18 15:32 ./usr/share/doc/probabel/ProbABEL_manual.pdf.gz -rw-r--r-- root/root 17451 2022-01-18 15:32 ./usr/share/doc/probabel/ProbABEL_manual.tex.gz -rw-r--r-- root/root 373 2016-05-04 20:48 ./usr/share/doc/probabel/QuickStart.txt -rw-r--r-- root/root 391 2022-01-18 15:32 ./usr/share/doc/probabel/README.Debian -rw-r--r-- root/root 527 2016-05-04 20:48 ./usr/share/doc/probabel/README.dox -rw-r--r-- root/root 1725 2016-05-04 20:48 ./usr/share/doc/probabel/README.org -rw-r--r-- root/root 548 2022-01-18 15:32 ./usr/share/doc/probabel/README.source -rw-r--r-- root/root 278 2022-01-18 15:32 ./usr/share/doc/probabel/README.test -rw-r--r-- root/root 86 2022-01-18 15:32 ./usr/share/doc/probabel/TODO -rw-r--r-- root/root 1916 2022-01-18 15:32 ./usr/share/doc/probabel/changelog.Debian.gz -rw-r--r-- root/root 8489 2016-05-04 20:48 ./usr/share/doc/probabel/changelog.gz -rw-r--r-- root/root 3826 2022-01-18 15:32 ./usr/share/doc/probabel/copyright -rw-r--r-- root/root 527 2022-01-18 15:32 ./usr/share/doc/probabel/short_coxph_data.txt -rw-r--r-- root/root 465 2022-01-18 15:32 ./usr/share/doc/probabel/short_height.txt -rw-r--r-- root/root 308 2022-01-18 15:32 ./usr/share/doc/probabel/short_height_base_add.out.txt.save -rw-r--r-- root/root 508 2022-01-18 15:32 ./usr/share/doc/probabel/short_logist_data.txt -rw-r--r-- root/root 498 2022-01-18 15:32 ./usr/share/doc/probabel/short_test.mldose -rw-r--r-- root/root 121 2022-01-18 15:32 ./usr/share/doc/probabel/test.map -rw-r--r-- root/root 244 2022-01-18 15:32 ./usr/share/doc/probabel/test.mlinfo -rw-r--r-- root/root 1451 2022-01-18 15:32 ./usr/share/doc/probabel/test_regression.R drwxr-xr-x root/root 0 2022-01-18 15:32 ./usr/share/man/ drwxr-xr-x root/root 0 2022-01-18 15:32 ./usr/share/man/man1/ -rw-r--r-- root/root 1220 2022-01-18 15:32 ./usr/share/man/man1/pacoxph.1.gz -rw-r--r-- root/root 1325 2022-01-18 15:32 ./usr/share/man/man1/palinear.1.gz -rw-r--r-- root/root 1366 2022-01-18 15:32 ./usr/share/man/man1/palogist.1.gz -rw-r--r-- root/root 1391 2022-01-18 15:32 ./usr/share/man/man1/probabel.1.gz -rw-r--r-- root/root 1391 2022-01-18 15:32 ./usr/share/man/man1/probabel.pl.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:arm64 Filtered Build-Depends: lintian:arm64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [600 B] Get:5 copy:/<>/apt_archive ./ Packages [666 B] Fetched 2229 B in 0s (49.6 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-ipv6addr-perl libnet-netmask-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libwww-perl binutils-multiarch libtext-template-perl zip Recommended packages: gnupg liblist-someutils-xs-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-ipv6addr-perl libnet-netmask-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils sbuild-build-depends-lintian-dummy:amd64 unzip 0 upgraded, 99 newly installed, 0 to remove and 0 not upgraded. Need to get 6570 kB of archives. After this operation, 20.4 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://mirror.einval.org/debian sid/main arm64 diffstat arm64 1.64-1 [34.6 kB] Get:3 http://mirror.einval.org/debian sid/main arm64 libassuan0 arm64 2.5.5-1 [49.3 kB] Get:4 http://mirror.einval.org/debian sid/main arm64 gpgconf arm64 2.2.27-3 [540 kB] Get:5 http://mirror.einval.org/debian sid/main arm64 gpg arm64 2.2.27-3 [885 kB] Get:6 http://mirror.einval.org/debian sid/main arm64 libaliased-perl all 0.34-1.1 [14.1 kB] Get:7 http://mirror.einval.org/debian sid/main arm64 libapt-pkg-perl arm64 0.1.40 [69.4 kB] Get:8 http://mirror.einval.org/debian sid/main arm64 libb-hooks-op-check-perl arm64 0.22-1+b3 [11.2 kB] Get:9 http://mirror.einval.org/debian sid/main arm64 libdynaloader-functions-perl all 0.003-1.1 [12.7 kB] Get:10 http://mirror.einval.org/debian sid/main arm64 libdevel-callchecker-perl arm64 0.008-1+b2 [15.8 kB] Get:11 http://mirror.einval.org/debian sid/main arm64 libparams-classify-perl arm64 0.015-1+b3 [25.5 kB] Get:12 http://mirror.einval.org/debian sid/main arm64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:13 http://mirror.einval.org/debian sid/main arm64 libtry-tiny-perl all 0.31-1 [24.2 kB] Get:14 http://mirror.einval.org/debian sid/main arm64 libmodule-implementation-perl all 0.09-1.1 [12.4 kB] Get:15 http://mirror.einval.org/debian sid/main arm64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:16 http://mirror.einval.org/debian sid/main arm64 libvariable-magic-perl arm64 0.62-1+b3 [44.2 kB] Get:17 http://mirror.einval.org/debian sid/main arm64 libb-hooks-endofscope-perl all 0.25-1 [19.5 kB] Get:18 http://mirror.einval.org/debian sid/main arm64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:19 http://mirror.einval.org/debian sid/main arm64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:20 http://mirror.einval.org/debian sid/main arm64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:21 http://mirror.einval.org/debian sid/main arm64 libclass-xsaccessor-perl arm64 1.19-3+b7 [36.9 kB] Get:22 http://mirror.einval.org/debian sid/main arm64 libclone-perl arm64 0.45-1+b1 [15.3 kB] Get:23 http://mirror.einval.org/debian sid/main arm64 libconfig-tiny-perl all 2.28-1 [17.3 kB] Get:24 http://mirror.einval.org/debian sid/main arm64 libparams-util-perl arm64 1.102-1+b1 [25.3 kB] Get:25 http://mirror.einval.org/debian sid/main arm64 libsub-install-perl all 0.928-1.1 [10.8 kB] Get:26 http://mirror.einval.org/debian sid/main arm64 libdata-optlist-perl all 0.112-1 [11.8 kB] Get:27 http://mirror.einval.org/debian sid/main arm64 libsub-exporter-perl all 0.988-1 [51.9 kB] Get:28 http://mirror.einval.org/debian sid/main arm64 libconst-fast-perl all 0.014-1.1 [8552 B] Get:29 http://mirror.einval.org/debian sid/main arm64 libcpanel-json-xs-perl arm64 4.27-1 [126 kB] Get:30 http://mirror.einval.org/debian sid/main arm64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:31 http://mirror.einval.org/debian sid/main arm64 libexception-class-perl all 1.45-1 [34.6 kB] Get:32 http://mirror.einval.org/debian sid/main arm64 libiterator-perl all 0.03+ds1-1.1 [18.4 kB] Get:33 http://mirror.einval.org/debian sid/main arm64 libiterator-util-perl all 0.02+ds1-1.1 [13.7 kB] Get:34 http://mirror.einval.org/debian sid/main arm64 libexporter-tiny-perl all 1.002002-1 [37.8 kB] Get:35 http://mirror.einval.org/debian sid/main arm64 liblist-moreutils-xs-perl arm64 0.430-2 [36.8 kB] Get:36 http://mirror.einval.org/debian sid/main arm64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:37 http://mirror.einval.org/debian sid/main arm64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:38 http://mirror.einval.org/debian sid/main arm64 libdata-messagepack-perl arm64 1.01-2 [34.3 kB] Get:39 http://mirror.einval.org/debian sid/main arm64 libnet-domain-tld-perl all 1.75-1.1 [33.5 kB] Get:40 http://mirror.einval.org/debian sid/main arm64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:41 http://mirror.einval.org/debian sid/main arm64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:42 http://mirror.einval.org/debian sid/main arm64 libnet-netmask-perl all 2.0001-1 [32.2 kB] Get:43 http://mirror.einval.org/debian sid/main arm64 libnetaddr-ip-perl arm64 4.079+dfsg-1+b5 [103 kB] Get:44 http://mirror.einval.org/debian sid/main arm64 libdata-validate-ip-perl all 0.30-1 [21.0 kB] Get:45 http://mirror.einval.org/debian sid/main arm64 libdata-validate-uri-perl all 0.07-1 [10.7 kB] Get:46 http://mirror.einval.org/debian sid/main arm64 libdevel-size-perl arm64 0.83-1+b2 [25.8 kB] Get:47 http://mirror.einval.org/debian sid/main arm64 libemail-address-xs-perl arm64 1.04-1+b3 [26.7 kB] Get:48 http://mirror.einval.org/debian sid/main arm64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:49 http://mirror.einval.org/debian sid/main arm64 libfile-basedir-perl all 0.09-1 [16.4 kB] Get:50 http://mirror.einval.org/debian sid/main arm64 libnumber-compare-perl all 0.03-2 [7448 B] Get:51 http://mirror.einval.org/debian sid/main arm64 libtext-glob-perl all 0.11-2 [8992 B] Get:52 http://mirror.einval.org/debian sid/main arm64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:53 http://mirror.einval.org/debian sid/main arm64 libfont-ttf-perl all 1.06-1.1 [318 kB] Get:54 http://mirror.einval.org/debian sid/main arm64 libhtml-html5-entities-perl all 0.004-1.1 [21.3 kB] Get:55 http://mirror.einval.org/debian sid/main arm64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:56 http://mirror.einval.org/debian sid/main arm64 libio-interactive-perl all 1.023-1 [11.5 kB] Get:57 http://mirror.einval.org/debian sid/main arm64 libio-prompt-tiny-perl all 0.003-1 [9150 B] Get:58 http://mirror.einval.org/debian sid/main arm64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:59 http://mirror.einval.org/debian sid/main arm64 libjson-maybexs-perl all 1.004003-1 [13.1 kB] Get:60 http://mirror.einval.org/debian sid/main arm64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:61 http://mirror.einval.org/debian sid/main arm64 liblist-someutils-perl all 0.58-1 [36.5 kB] Get:62 http://mirror.einval.org/debian sid/main arm64 liblist-utilsby-perl all 0.11-1 [15.4 kB] Get:63 http://mirror.einval.org/debian sid/main arm64 liblzo2-2 arm64 2.10-2 [51.8 kB] Get:64 http://mirror.einval.org/debian sid/main arm64 libmarkdown2 arm64 2.2.7-2 [34.1 kB] Get:65 http://mirror.einval.org/debian sid/main arm64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:66 http://mirror.einval.org/debian sid/main arm64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:67 http://mirror.einval.org/debian sid/main arm64 libmoo-perl all 2.005004-3 [60.5 kB] Get:68 http://mirror.einval.org/debian sid/main arm64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:69 http://mirror.einval.org/debian sid/main arm64 libmoox-aliases-perl all 0.001006-1.1 [10.8 kB] Get:70 http://mirror.einval.org/debian sid/main arm64 libmouse-perl arm64 2.5.10-1+b1 [170 kB] Get:71 http://mirror.einval.org/debian sid/main arm64 libpackage-stash-perl all 0.39-1 [21.9 kB] Get:72 http://mirror.einval.org/debian sid/main arm64 libsub-identify-perl arm64 0.14-1+b3 [11.9 kB] Get:73 http://mirror.einval.org/debian sid/main arm64 libsub-name-perl arm64 0.26-1+b1 [13.5 kB] Get:74 http://mirror.einval.org/debian sid/main arm64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:75 http://mirror.einval.org/debian sid/main arm64 libpath-tiny-perl all 0.122-1 [56.0 kB] Get:76 http://mirror.einval.org/debian sid/main arm64 libperlio-gzip-perl arm64 0.19-1+b7 [17.0 kB] Get:77 http://mirror.einval.org/debian sid/main arm64 libperlio-utf8-strict-perl arm64 0.009-1 [11.7 kB] Get:78 http://mirror.einval.org/debian sid/main arm64 libproc-processtable-perl arm64 0.634-1 [46.1 kB] Get:79 http://mirror.einval.org/debian sid/main arm64 libsereal-decoder-perl arm64 4.018+ds-1+b1 [95.3 kB] Get:80 http://mirror.einval.org/debian sid/main arm64 libsereal-encoder-perl arm64 4.018+ds-1+b1 [98.3 kB] Get:81 http://mirror.einval.org/debian sid/main arm64 libsort-versions-perl all 1.62-1 [11.0 kB] Get:82 http://mirror.einval.org/debian sid/main arm64 libxs-parse-keyword-perl arm64 0.21-1 [49.8 kB] Get:83 http://mirror.einval.org/debian sid/main arm64 libsyntax-keyword-try-perl arm64 0.26-1 [28.4 kB] Get:84 http://mirror.einval.org/debian sid/main arm64 libterm-readkey-perl arm64 2.38-1+b2 [27.3 kB] Get:85 http://mirror.einval.org/debian sid/main arm64 libtext-levenshteinxs-perl arm64 0.03-4+b8 [8680 B] Get:86 http://mirror.einval.org/debian sid/main arm64 libtext-markdown-discount-perl arm64 0.13-1 [13.1 kB] Get:87 http://mirror.einval.org/debian sid/main arm64 libtext-xslate-perl arm64 3.5.9-1 [195 kB] Get:88 http://mirror.einval.org/debian sid/main arm64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:89 http://mirror.einval.org/debian sid/main arm64 libtime-moment-perl arm64 0.44-1+b3 [75.1 kB] Get:90 http://mirror.einval.org/debian sid/main arm64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:91 http://mirror.einval.org/debian sid/main arm64 libunicode-utf8-perl arm64 0.62-1+b2 [19.8 kB] Get:92 http://mirror.einval.org/debian sid/main arm64 liburi-perl all 5.10-1 [91.0 kB] Get:93 http://mirror.einval.org/debian sid/main arm64 libyaml-0-2 arm64 0.2.2-1 [45.1 kB] Get:94 http://mirror.einval.org/debian sid/main arm64 libyaml-libyaml-perl arm64 0.83+ds-1 [34.2 kB] Get:95 http://mirror.einval.org/debian sid/main arm64 lzip arm64 1.22-5 [84.8 kB] Get:96 http://mirror.einval.org/debian sid/main arm64 lzop arm64 1.04-2 [82.8 kB] Get:97 http://mirror.einval.org/debian sid/main arm64 patchutils arm64 0.4.2-1 [73.5 kB] Get:98 http://mirror.einval.org/debian sid/main arm64 unzip arm64 6.0-26 [165 kB] Get:99 http://mirror.einval.org/debian sid/main arm64 lintian all 2.114.0 [1382 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 6570 kB in 0s (36.8 MB/s) Selecting previously unselected package diffstat. (Reading database ... 40866 files and directories currently installed.) Preparing to unpack .../00-diffstat_1.64-1_arm64.deb ... Unpacking diffstat (1.64-1) ... Selecting previously unselected package libassuan0:arm64. Preparing to unpack .../01-libassuan0_2.5.5-1_arm64.deb ... Unpacking libassuan0:arm64 (2.5.5-1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../02-gpgconf_2.2.27-3_arm64.deb ... Unpacking gpgconf (2.2.27-3) ... Selecting previously unselected package gpg. Preparing to unpack .../03-gpg_2.2.27-3_arm64.deb ... Unpacking gpg (2.2.27-3) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../04-libaliased-perl_0.34-1.1_all.deb ... Unpacking libaliased-perl (0.34-1.1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../05-libapt-pkg-perl_0.1.40_arm64.deb ... Unpacking libapt-pkg-perl (0.1.40) ... Selecting previously unselected package libb-hooks-op-check-perl. 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Unpacking libexporter-tiny-perl (1.002002-1) ... Selecting previously unselected package liblist-moreutils-xs-perl. Preparing to unpack .../33-liblist-moreutils-xs-perl_0.430-2_arm64.deb ... Unpacking liblist-moreutils-xs-perl (0.430-2) ... Selecting previously unselected package liblist-moreutils-perl. Preparing to unpack .../34-liblist-moreutils-perl_0.430-2_all.deb ... Unpacking liblist-moreutils-perl (0.430-2) ... Selecting previously unselected package libdata-dpath-perl. Preparing to unpack .../35-libdata-dpath-perl_0.58-1_all.deb ... Unpacking libdata-dpath-perl (0.58-1) ... Selecting previously unselected package libdata-messagepack-perl. Preparing to unpack .../36-libdata-messagepack-perl_1.01-2_arm64.deb ... Unpacking libdata-messagepack-perl (1.01-2) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../37-libnet-domain-tld-perl_1.75-1.1_all.deb ... Unpacking libnet-domain-tld-perl (1.75-1.1) ... Selecting previously unselected package libdata-validate-domain-perl. Preparing to unpack .../38-libdata-validate-domain-perl_0.10-1.1_all.deb ... Unpacking libdata-validate-domain-perl (0.10-1.1) ... Selecting previously unselected package libnet-ipv6addr-perl. Preparing to unpack .../39-libnet-ipv6addr-perl_1.02-1_all.deb ... Unpacking libnet-ipv6addr-perl (1.02-1) ... Selecting previously unselected package libnet-netmask-perl. Preparing to unpack .../40-libnet-netmask-perl_2.0001-1_all.deb ... Unpacking libnet-netmask-perl (2.0001-1) ... Selecting previously unselected package libnetaddr-ip-perl. Preparing to unpack .../41-libnetaddr-ip-perl_4.079+dfsg-1+b5_arm64.deb ... Unpacking libnetaddr-ip-perl (4.079+dfsg-1+b5) ... Selecting previously unselected package libdata-validate-ip-perl. Preparing to unpack .../42-libdata-validate-ip-perl_0.30-1_all.deb ... Unpacking libdata-validate-ip-perl (0.30-1) ... Selecting previously unselected package libdata-validate-uri-perl. 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Selecting previously unselected package liblist-utilsby-perl. Preparing to unpack .../60-liblist-utilsby-perl_0.11-1_all.deb ... Unpacking liblist-utilsby-perl (0.11-1) ... Selecting previously unselected package liblzo2-2:arm64. Preparing to unpack .../61-liblzo2-2_2.10-2_arm64.deb ... Unpacking liblzo2-2:arm64 (2.10-2) ... Selecting previously unselected package libmarkdown2:arm64. Preparing to unpack .../62-libmarkdown2_2.2.7-2_arm64.deb ... Unpacking libmarkdown2:arm64 (2.2.7-2) ... Selecting previously unselected package librole-tiny-perl. Preparing to unpack .../63-librole-tiny-perl_2.002004-1_all.deb ... Unpacking librole-tiny-perl (2.002004-1) ... Selecting previously unselected package libsub-quote-perl. Preparing to unpack .../64-libsub-quote-perl_2.006006-1_all.deb ... Unpacking libsub-quote-perl (2.006006-1) ... Selecting previously unselected package libmoo-perl. Preparing to unpack .../65-libmoo-perl_2.005004-3_all.deb ... Unpacking libmoo-perl (2.005004-3) ... 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Unpacking sbuild-build-depends-lintian-dummy:amd64 (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.40) ... Setting up libunicode-utf8-perl (0.62-1+b2) ... Setting up libmouse-perl (2.5.10-1+b1) ... Setting up libdata-messagepack-perl (1.01-2) ... Setting up libdynaloader-functions-perl (0.003-1.1) ... Setting up libtext-glob-perl (0.11-2) ... Setting up libclass-method-modifiers-perl (2.13-1) ... Setting up liblist-compare-perl (0.55-1) ... Setting up libclone-perl (0.45-1+b1) ... Setting up libyaml-0-2:arm64 (0.2.2-1) ... Setting up libsub-identify-perl (0.14-1+b3) ... Setting up libcpanel-json-xs-perl:arm64 (4.27-1) ... Setting up libdevel-size-perl (0.83-1+b2) ... Setting up unzip (6.0-26) ... Setting up libyaml-libyaml-perl (0.83+ds-1) ... Setting up libio-interactive-perl (1.023-1) ... Setting up libtry-tiny-perl (0.31-1) ... Setting up liblzo2-2:arm64 (2.10-2) ... Setting up libtime-moment-perl (0.44-1+b3) ... Setting up libassuan0:arm64 (2.5.5-1) ... Setting up libconfig-tiny-perl (2.28-1) ... Setting up libsereal-encoder-perl (4.018+ds-1+b1) ... Setting up liblist-utilsby-perl (0.11-1) ... Setting up libnet-netmask-perl (2.0001-1) ... Setting up libsub-install-perl (0.928-1.1) ... Setting up libnumber-compare-perl (0.03-2) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004003-1) ... Setting up libnetaddr-ip-perl (4.079+dfsg-1+b5) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libxs-parse-keyword-perl (0.21-1) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up libipc-system-simple-perl (1.30-1) ... Setting up libnet-domain-tld-perl (1.75-1.1) ... Setting up libperlio-utf8-strict-perl (0.009-1) ... Setting up libio-prompt-tiny-perl (0.003-1) ... Setting up lzip (1.22-5) ... update-alternatives: using /usr/bin/lzip.lzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.lzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.lzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up diffstat (1.64-1) ... Setting up libvariable-magic-perl (0.62-1+b3) ... Setting up libb-hooks-op-check-perl (0.22-1+b3) ... Setting up liblist-moreutils-xs-perl (0.430-2) ... Setting up libparams-util-perl (1.102-1+b1) ... Setting up libtime-duration-perl (1.21-1) ... Setting up libtext-xslate-perl:arm64 (3.5.9-1) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libsub-name-perl (0.26-1+b1) ... Setting up libsyntax-keyword-try-perl (0.26-1) ... Setting up libdata-validate-domain-perl (0.10-1.1) ... Setting up libproc-processtable-perl:arm64 (0.634-1) ... Setting up libpath-tiny-perl (0.122-1) ... Setting up lzop (1.04-2) ... Setting up gpgconf (2.2.27-3) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libipc-run3-perl (0.048-2) ... Setting up libaliased-perl (0.34-1.1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libdevel-stacktrace-perl (2.0400-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b7) ... Setting up libsort-versions-perl (1.62-1) ... Setting up libexporter-tiny-perl (1.002002-1) ... Setting up libterm-readkey-perl (2.38-1+b2) ... Setting up libfont-ttf-perl (1.06-1.1) ... Setting up libtext-levenshteinxs-perl (0.03-4+b8) ... Setting up libperlio-gzip-perl (0.19-1+b7) ... Setting up libhtml-html5-entities-perl (0.004-1.1) ... Setting up libsereal-decoder-perl (4.018+ds-1+b1) ... Setting up libmarkdown2:arm64 (2.2.7-2) ... Setting up liburi-perl (5.10-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up gpg (2.2.27-3) ... Setting up libdata-validate-ip-perl (0.30-1) ... Setting up libemail-address-xs-perl (1.04-1+b3) ... Setting up libfile-basedir-perl (0.09-1) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libtext-markdown-discount-perl:arm64 (0.13-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl (0.008-1+b2) ... Setting up libdata-validate-uri-perl (0.07-1) ... Setting up libdata-optlist-perl (0.112-1) ... Setting up libsub-exporter-perl (0.988-1) ... Setting up libiterator-perl (0.03+ds1-1.1) ... Setting up libiterator-util-perl (0.02+ds1-1.1) ... Setting up libparams-classify-perl (0.015-1+b3) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libconst-fast-perl (0.014-1.1) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-1.1) ... Setting up libpackage-stash-perl (0.39-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.005004-3) ... Setting up liblist-someutils-perl (0.58-1) ... Setting up libmoox-aliases-perl (0.001006-1.1) ... Setting up libb-hooks-endofscope-perl (0.25-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.114.0) ... Setting up sbuild-build-depends-lintian-dummy:amd64 (0.invalid.0) ... Processing triggers for man-db (2.9.4-4) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.33-3) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Build-Space: 299948 Build-Time: 810 Distribution: unstable Foreign Architectures: amd64 Host Architecture: amd64 Install-Time: 139 Job: probabel_0.5.0+dfsg-5 Lintian: pass Machine Architecture: arm64 Package: probabel Package-Time: 979 Source-Version: 0.5.0+dfsg-5 Space: 299948 Status: successful Version: 0.5.0+dfsg-5 -------------------------------------------------------------------------------- Finished at 2022-01-21T10:27:20Z Build needed 00:16:19, 299948k disk space