sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | probcons 1.12-12 (s390x) Fri, 01 Nov 2019 13:44:35 +0000 | +==============================================================================+ Package: probcons Version: 1.12-12 Source Version: 1.12-12 Distribution: unstable Machine Architecture: amd64 Host Architecture: s390x Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-5919b43a-2bb3-4c6f-8f35-4d68ab6f6e32' with '<>' I: NOTICE: Log filtering will replace 'build/probcons-iv698H/resolver-o0yA02' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [139 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-11-01-0822.45.pdiff [3562 B] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-11-01-0822.45.pdiff [3562 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-11-01-0822.45.pdiff [2071 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-11-01-0822.45.pdiff [2071 B] Get:6 http://debian.oregonstate.edu/debian unstable/main s390x Packages [7881 kB] Fetched 8081 kB in 2s (4490 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'probcons' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/probcons.git Please use: git clone https://salsa.debian.org/med-team/probcons.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 58.4 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main probcons 1.12-12 (dsc) [2044 B] Get:2 http://debian.oregonstate.edu/debian unstable/main probcons 1.12-12 (tar) [43.2 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main probcons 1.12-12 (diff) [13.1 kB] Fetched 58.4 kB in 0s (0 B/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/probcons-iv698H/probcons-1.12' with '<>' I: NOTICE: Log filtering will replace 'build/probcons-iv698H' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 11~), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x Filtered Build-Depends: debhelper (>= 11~), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [403 B] Get:5 copy:/<>/apt_archive ./ Packages [492 B] Fetched 1852 B in 0s (95.6 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-s390x-linux-gnu bsdmainutils cpp-9-s390x-linux-gnu cpp-s390x-linux-gnu cross-config crossbuild-essential-s390x debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-9-s390x-linux-gnu g++-s390x-linux-gnu gcc-9-base:s390x gcc-9-cross-base gcc-9-s390x-linux-gnu gcc-9-s390x-linux-gnu-base gcc-s390x-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:s390x libasan5-s390x-cross libatomic1:s390x libatomic1-s390x-cross libbsd0 libc6:s390x libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:s390x libgcc-9-dev-s390x-cross libgcc1:s390x libgcc1-s390x-cross libglib2.0-0 libgomp1:s390x libgomp1-s390x-cross libicu63 libio-string-perl libitm1:s390x libitm1-s390x-cross liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libpipeline1 libsigsegv2 libstdc++-9-dev:s390x libstdc++-9-dev-s390x-cross libstdc++6:s390x libstdc++6-s390x-cross libsub-override-perl libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:s390x linux-libc-dev-s390x-cross m4 man-db po-debconf sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican | wordlist whois vacation gcc-9-locales cpp-doc dh-make binutils-multiarch g++-9-multilib-s390x-linux-gnu gcc-9-doc libstdc++6-9-dbg-s390x-cross gcc-9-multilib-s390x-linux-gnu libgcc1-dbg-s390x-cross libgomp1-dbg-s390x-cross libitm1-dbg-s390x-cross libatomic1-dbg-s390x-cross libasan5-dbg-s390x-cross liblsan0-dbg-s390x-cross libtsan0-dbg-s390x-cross libubsan1-dbg-s390x-cross libquadmath0-dbg-s390x-cross manpages-dev flex bison gdb-s390x-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:s390x libc-l10n:s390x locales:s390x manpages-dev:s390x libstdc++-9-doc:s390x libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:s390x libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpm2 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-s390x-linux-gnu bsdmainutils cpp-9-s390x-linux-gnu cpp-s390x-linux-gnu cross-config crossbuild-essential-s390x debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-9-s390x-linux-gnu g++-s390x-linux-gnu gcc-9-base:s390x gcc-9-cross-base gcc-9-s390x-linux-gnu gcc-9-s390x-linux-gnu-base gcc-s390x-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:s390x libasan5-s390x-cross libatomic1:s390x libatomic1-s390x-cross libbsd0 libc6:s390x libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:s390x libgcc-9-dev-s390x-cross libgcc1:s390x libgcc1-s390x-cross libglib2.0-0 libgomp1:s390x libgomp1-s390x-cross libicu63 libio-string-perl libitm1:s390x libitm1-s390x-cross liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libpipeline1 libsigsegv2 libstdc++-9-dev:s390x libstdc++-9-dev-s390x-cross libstdc++6:s390x libstdc++6-s390x-cross libsub-override-perl libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:s390x linux-libc-dev-s390x-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:s390x sensible-utils ucf 0 upgraded, 87 newly installed, 0 to remove and 0 not upgraded. Need to get 59.4 MB of archives. After this operation, 241 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [912 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.0-1 [1307 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main s390x gcc-9-base s390x 9.2.1-16 [194 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.37-6 [253 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.37-6 [119 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.37-6 [67.2 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-s390x-linux-gnu amd64 2.33.1-2 [1918 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-s390x-linux-gnu-base amd64 9.2.1-15cross1 [194 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-s390x-linux-gnu amd64 9.2.1-15cross1 [6137 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-s390x-linux-gnu amd64 4:9.2.1-3.1 [16.7 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base all 9.2.1-15cross1 [189 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-s390x-cross all 2.29-1cross7 [1257 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-s390x-cross all 1:9.2.1-15cross1 [24.4 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-s390x-cross all 9.2.1-15cross1 [79.2 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-s390x-cross all 9.2.1-15cross1 [26.4 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-s390x-cross all 9.2.1-15cross1 [8004 B] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-s390x-cross all 9.2.1-15cross1 [337 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-s390x-cross all 9.2.1-15cross1 [449 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-s390x-cross all 9.2.1-15cross1 [119 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-s390x-cross all 9.2.1-15cross1 [682 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-s390x-linux-gnu amd64 9.2.1-15cross1 [6503 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-s390x-linux-gnu amd64 4:9.2.1-3.1 [1456 B] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-s390x-cross all 5.2.9-2cross7 [1327 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-s390x-cross all 2.29-1cross7 [2223 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-s390x-cross all 9.2.1-15cross1 [1647 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-s390x-linux-gnu amd64 9.2.1-15cross1 [6716 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 g++-s390x-linux-gnu amd64 4:9.2.1-3.1 [1176 B] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-2 [8301 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1+b1 [344 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.29-1 [67.4 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-s390x all 12.8 [6636 B] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-11 [547 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.67-1 [104 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.6.1-1 [23.5 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.6.1-1 [14.4 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-1 [81.8 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 12.7.1 [173 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.62.2-2 [1318 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20191019-1 [102 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.7.1 [997 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main s390x libgcc1 s390x 1:9.2.1-16 [24.3 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main s390x libc6 s390x 2.29-2 [2457 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main s390x libasan5 s390x 9.2.1-16 [344 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main s390x libatomic1 s390x 9.2.1-16 [8116 B] Get:80 http://debian.oregonstate.edu/debian unstable/main s390x linux-libc-dev s390x 5.3.7-1 [992 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main s390x libc6-dev s390x 2.29-2 [2249 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main s390x libgomp1 s390x 9.2.1-16 [81.1 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main s390x libitm1 s390x 9.2.1-16 [26.7 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main s390x libstdc++6 s390x 9.2.1-16 [491 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main s390x libubsan1 s390x 9.2.1-16 [120 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main s390x libgcc-9-dev s390x 9.2.1-16 [681 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main s390x libstdc++-9-dev s390x 9.2.1-16 [1658 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 59.4 MB in 1s (67.4 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 14998 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.9.0-1_amd64.deb ... Unpacking man-db (2.9.0-1) ... 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Preparing to unpack .../86-sbuild-build-depends-main-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-main-dummy:s390x (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up libfile-which-perl (1.23-1) ... Setting up binutils-s390x-linux-gnu (2.33.1-2) ... Setting up libmagic-mgc (1:5.37-6) ... Setting up libarchive-zip-perl (1.67-1) ... Setting up libglib2.0-0:amd64 (2.62.2-2) ... No schema files found: doing nothing. Setting up libdebhelper-perl (12.7.1) ... Setting up libc6-s390x-cross (2.29-1cross7) ... Setting up gcc-9-s390x-linux-gnu-base:amd64 (9.2.1-15cross1) ... Setting up libmagic1:amd64 (1:5.37-6) ... Setting up linux-libc-dev:s390x (5.3.7-1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.37-6) ... Setting up libyaml-perl (1.29-1) ... Setting up libicu63:amd64 (63.2-2) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up autotools-dev (20180224.1) ... Setting up linux-libc-dev-s390x-cross (5.2.9-2cross7) ... Setting up cross-config (2.6.15-3) ... Setting up cpp-9-s390x-linux-gnu (9.2.1-15cross1) ... Setting up libncurses6:amd64 (6.1+20191019-1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up autopoint (0.19.8.1-9) ... Setting up gcc-9-cross-base (9.2.1-15cross1) ... Setting up libitm1-s390x-cross (9.2.1-15cross1) ... Setting up sensible-utils (0.0.12) ... Setting up libc6-dev-s390x-cross (2.29-1cross7) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libgomp1-s390x-cross (9.2.1-15cross1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up libgcc1-s390x-cross (1:9.2.1-15cross1) ... Setting up gcc-9-base:s390x (9.2.1-16) ... Setting up libfile-stripnondeterminism-perl (1.6.1-1) ... Setting up cpp-s390x-linux-gnu (4:9.2.1-3.1) ... Setting up libtool (2.4.6-11) ... Setting up libstdc++6-s390x-cross (9.2.1-15cross1) ... Setting up libatomic1-s390x-cross (9.2.1-15cross1) ... Setting up m4 (1.4.18-2) ... Setting up libasan5-s390x-cross (9.2.1-15cross1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0038+nmu1) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.13-1) ... Setting up groff-base (1.22.4-3) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libubsan1-s390x-cross (9.2.1-15cross1) ... Setting up gettext (0.19.8.1-9) ... Setting up man-db (2.9.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxml-libxml-perl (2.0134+dfsg-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-9-dev-s390x-cross (9.2.1-15cross1) ... Setting up po-debconf (1.0.21) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libstdc++-9-dev-s390x-cross (9.2.1-15cross1) ... Setting up gcc-9-s390x-linux-gnu (9.2.1-15cross1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up gcc-s390x-linux-gnu (4:9.2.1-3.1) ... Setting up g++-9-s390x-linux-gnu (9.2.1-15cross1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up g++-s390x-linux-gnu (4:9.2.1-3.1) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-s390x (12.8) ... Setting up dh-autoreconf (19) ... Setting up libc6:s390x (2.29-2) ... Setting up libc6-dev:s390x (2.29-2) ... Setting up libitm1:s390x (9.2.1-16) ... Setting up libgcc1:s390x (1:9.2.1-16) ... Setting up debhelper (12.7.1) ... Setting up libgomp1:s390x (9.2.1-16) ... Setting up libasan5:s390x (9.2.1-16) ... Setting up libatomic1:s390x (9.2.1-16) ... Setting up dh-strip-nondeterminism (1.6.1-1) ... Setting up libstdc++6:s390x (9.2.1-16) ... Setting up libubsan1:s390x (9.2.1-16) ... Setting up libgcc-9-dev:s390x (9.2.1-16) ... Setting up libstdc++-9-dev:s390x (9.2.1-16) ... Setting up sbuild-build-depends-main-dummy:s390x (0.invalid.0) ... Processing triggers for libc-bin (2.29-2) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (s390x included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 #1 SMP Debian 4.9.144-3.1 (2019-02-19) amd64 (x86_64) Toolchain package versions: binutils_2.33.1-2 dpkg-dev_1.19.7 g++-8_8.3.0-23 g++-9_9.2.1-16 gcc-8_8.3.0-23 gcc-9_9.2.1-16 libc6-dev_2.29-2 libstdc++-8-dev_8.3.0-23 libstdc++-9-dev_9.2.1-16 libstdc++-9-dev-s390x-cross_9.2.1-15cross1 libstdc++6_9.2.1-16 libstdc++6-s390x-cross_9.2.1-15cross1 linux-libc-dev_5.3.7-1 Package versions: adduser_3.118 apt_1.8.4 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.46 bash_5.0-4 binutils_2.33.1-2 binutils-common_2.33.1-2 binutils-s390x-linux-gnu_2.33.1-2 binutils-x86-64-linux-gnu_2.33.1-2 bsdmainutils_11.1.2+b1 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 coreutils_8.30-3+b1 cpp_4:9.2.1-3.1 cpp-8_8.3.0-23 cpp-9_9.2.1-16 cpp-9-s390x-linux-gnu_9.2.1-15cross1 cpp-s390x-linux-gnu_4:9.2.1-3.1 cross-config_2.6.15-3 crossbuild-essential-s390x_12.8 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.7.1 debian-archive-keyring_2019.1 debianutils_4.9 dh-autoreconf_19 dh-strip-nondeterminism_1.6.1-1 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.13-1 e2fsprogs_1.45.4-1 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.37-6 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-8_8.3.0-23 g++-9_9.2.1-16 g++-9-s390x-linux-gnu_9.2.1-15cross1 g++-s390x-linux-gnu_4:9.2.1-3.1 gcc_4:9.2.1-3.1 gcc-8_8.3.0-23 gcc-8-base_8.3.0-23 gcc-9_9.2.1-16 gcc-9-base_9.2.1-16 gcc-9-cross-base_9.2.1-15cross1 gcc-9-s390x-linux-gnu_9.2.1-15cross1 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libnettle6_3.5.1+really3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libp11-kit0_0.23.18.1-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.32-5+b1 libpcre3_2:8.39-12+b1 libperl5.28_5.28.1-6 libperl5.30_5.30.0-9 libpipeline1_1.5.1-2 libquadmath0_9.2.1-16 libseccomp2_2.4.1-2 libselinux1_2.9-2+b2 libsemanage-common_2.9-3 libsemanage1_2.9-3 libsepol1_2.9-2+b2 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libss2_1.45.4-1 libstdc++-8-dev_8.3.0-23 libstdc++-9-dev_9.2.1-16 libstdc++-9-dev-s390x-cross_9.2.1-15cross1 libstdc++6_9.2.1-16 libstdc++6-s390x-cross_9.2.1-15cross1 libsub-override-perl_0.09-2 libsystemd0_242-7 libtasn1-6_4.14-3 libtinfo6_6.1+20191019-1 libtool_2.4.6-11 libtsan0_9.2.1-16 libubsan1_9.2.1-16 libubsan1-s390x-cross_9.2.1-15cross1 libuchardet0_0.0.6-3 libudev1_242-7 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libxml-libxml-perl_2.0134+dfsg-1+b1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-perl_1.29-1 libzstd1_1.4.3+dfsg-1 linux-libc-dev_5.3.7-1 linux-libc-dev-s390x-cross_5.2.9-2cross7 login_1:4.7-2 logsave_1.45.4-1 lsb-base_11.1.0 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.9.0-1 mawk_1.3.3-17+b3 mount_2.34-0.1 ncurses-base_6.1+20191019-1 ncurses-bin_6.1+20191019-1 passwd_1:4.7-2 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.0-9 po-debconf_1.0.21 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.96-1 tar_1.30+dfsg-6+b1 tzdata_2019c-3 ucf_3.0038+nmu1 util-linux_2.34-0.1 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-1+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: probcons Binary: probcons, probcons-extra Architecture: any Version: 1.12-12 Maintainer: Debian Med Packaging Team Uploaders: Charles Plessy , Andreas Tille Homepage: http://probcons.stanford.edu/ Standards-Version: 4.1.5 Vcs-Browser: https://salsa.debian.org/med-team/probcons Vcs-Git: https://salsa.debian.org/med-team/probcons.git Testsuite: autopkgtest Build-Depends: debhelper (>= 11~) Package-List: probcons deb science optional arch=any probcons-extra deb science optional arch=any Checksums-Sha1: ee6ce81777c9ce366f575ab4096ff07f39af9829 43200 probcons_1.12.orig.tar.gz 4f4306df4bb2b5ed3f62d224bf5397553b289d88 13148 probcons_1.12-12.debian.tar.xz Checksums-Sha256: ecf3f9ab9ad47e14787c76d1c64aeea5533d4038c4be0236c00cdd79104cf383 43200 probcons_1.12.orig.tar.gz 7b5f2fc7f0b80f91f0b44e3ff3da7ce97e419d6b990a4c96f08455b41cd92018 13148 probcons_1.12-12.debian.tar.xz Files: a658e24b07aaa9e8194317345133ac9d 43200 probcons_1.12.orig.tar.gz f41183526180944f4272d06e1dc9cc7a 13148 probcons_1.12-12.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAltLSL8RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtELpw/+NX8pbDZJoKAe6piHO/6SKndthFfnpByx rMQLokM5pnT68QERJzVpRG8QLCk6V8xQ2/kp3FZgcSvuPLH+yJ/kxGTRi9Rnh3SD Bz/qZW2ZVPhsQJavBCA7OOd6hFMxlIoq8lnVHBBYKNngUO7BeNfjGzZXESl2cDuJ h3DjF0IDeZX/N/XM8BDVcTOsz4M5MNF/hlhq+LyMnipQ6VuSch9coqX2lwcKzqdo e19rdZQ91+sut4vWWLcXxCQtE1vY8jHK367mUQWAAX0XRWqBAy0k/7z3oyAaDRLc aAXKMLvTDDJ3VXabYPJK1Wo60VU7MIRtViRp8NN0k6I0kyrlTIKjTNiH4clFRDGE ty+jR+rhsSOaGYXUSO8bxQ/guqoIDATawkX2cQYJD6YagcrOsQu9Fn4diGDciz6i yZJmohRl7HGdE6n+TsuKV9Hl6Y2lWr7LJHUYDImLHtF4gYVftB6D0oX1ao/ss5N4 CqVIY6t2tVIJX6CobKJ88tVRBvkSIRhD3LBj8z9CtOUjVEVZIr0BYMV2hbR/hR+o JF76G+ETN2NEAlg4Xx5TONJmPkVhzo8CY9OOLCG8slAwko4zXHb5lDNajIK/qZHw 0jYscX1lLe8dm4o1DgRW1+SucL5CVAhW/anonm0HMYMoothw035tjGAE97O5Zbk0 XQD/2kZakMo= =CmXP -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Sun Jul 15 13:14:39 2018 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./probcons_1.12-12.dsc dpkg-source: info: extracting probcons in /<> dpkg-source: info: unpacking probcons_1.12.orig.tar.gz dpkg-source: info: unpacking probcons_1.12-12.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 10_add-RNA-in-Makefile.patch dpkg-source: info: applying 11-Rename-programs-in-Makefile.patch dpkg-source: info: applying fix-gcc-4.5-headers dpkg-source: info: applying fix-gcc-4.6.patch dpkg-source: info: applying hardening.patch dpkg-source: info: applying mayhem.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.s390x DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-5919b43a-2bb3-4c6f-8f35-4d68ab6f6e32 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -as390x -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package probcons dpkg-buildpackage: info: source version 1.12-12 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type s390x-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture s390x fakeroot debian/rules clean dh clean dh_auto_clean make -j1 clean make[1]: Entering directory '/<>' rm -f probcons probcons-RNA pc-compare pc-project pc-makegnuplot make[1]: Leaving directory '/<>' debian/rules override_dh_clean make[1]: Entering directory '/<>' dh_clean probcons probcons-RNA pc-project pc-compare pc-makegnuplot Main-RNA.cc Defaults-RNA.h make[1]: Leaving directory '/<>' debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>' cp Main.cc Main-RNA.cc sed -i s/Defaults.h/Defaults-RNA.h/ Main-RNA.cc cp debian/Defaults-RNA.h Defaults-RNA.h dh_auto_build make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=s390x-linux-gnu-pkg-config CXX=s390x-linux-gnu-g\+\+ CC=s390x-linux-gnu-gcc make[2]: Entering directory '/<>' s390x-linux-gnu-g++ -O3 -W -Wall -pedantic -DNDEBUG -DNumInsertStates=2 -DVERSION="1.12" -funroll-loops -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -lm -o probcons Main.cc -Wl,-z,relro -Wl,-z,now In file included from MultiSequence.h:18, from Main.cc:8: Sequence.h: In member function ‘Sequence* Sequence::Clone() const’: Sequence.h:293:21: warning: implicitly-declared ‘SafeVector& SafeVector::operator=(const SafeVector&)’ is deprecated [-Wdeprecated-copy] 293 | *(ret->data) = *data; | ^~~~ In file included from Main.cc:7: SafeVector.h:29:3: note: because ‘SafeVector’ has user-provided ‘SafeVector::SafeVector(const SafeVector&) [with TYPE = char]’ 29 | SafeVector (const SafeVector &source) : std::vector(source) {} | ^~~~~~~~~~ In file included from Main.cc:11: ProbabilisticModel.h: In member function ‘void ProbabilisticModel::ComputeNewParameters(Sequence*, Sequence*, const VF&, const VF&, VF&, VF&, VF&, VVF&, VF&, bool) const’: ProbabilisticModel.h:493:31: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 493 | if (enableTrainEmissions && i != 1 || j != 1){ | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ ProbabilisticModel.h: In member function ‘VF* ProbabilisticModel::BuildPosterior(MultiSequence*, MultiSequence*, const SafeVector >&, float) const’: ProbabilisticModel.h:1027:18: warning: variable ‘postPtr’ set but not used [-Wunused-but-set-variable] 1027 | VF::iterator postPtr = posterior.begin(); | ^~~~~~~ Main.cc: In function ‘void PrintParameters(const char*, const VF&, const VF&, const VF&, const VVF&, const VF&, const char*)’: Main.cc:282:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 282 | for (int i = 0; i < NumMatrixTypes; i++) fprintf (file, "%.10f ", initDistrib[i]); fprintf (file, "\n"); | ^~~ Main.cc:282:88: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 282 | for (int i = 0; i < NumMatrixTypes; i++) fprintf (file, "%.10f ", initDistrib[i]); fprintf (file, "\n"); | ^~~~~~~ Main.cc:283:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 283 | for (int i = 0; i < 2*NumInsertStates; i++) fprintf (file, "%.10f ", gapOpen[i]); fprintf (file, "\n"); | ^~~ Main.cc:283:87: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 283 | for (int i = 0; i < 2*NumInsertStates; i++) fprintf (file, "%.10f ", gapOpen[i]); fprintf (file, "\n"); | ^~~~~~~ Main.cc:284:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 284 | for (int i = 0; i < 2*NumInsertStates; i++) fprintf (file, "%.10f ", gapExtend[i]); fprintf (file, "\n"); | ^~~ Main.cc:284:89: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 284 | for (int i = 0; i < 2*NumInsertStates; i++) fprintf (file, "%.10f ", gapExtend[i]); fprintf (file, "\n"); | ^~~~~~~ Main.cc: In function ‘MultiSequence* DoAlign(MultiSequence*, const ProbabilisticModel&, VF&, VF&, VF&, VVF&, VF&)’: Main.cc:400:6: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 400 | if (enableVerbose) | ^~ Main.cc:403:8: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 403 | delete alignment.first; | ^~~~~~ Main.cc: In function ‘void ReadParameters()’: Main.cc:893:40: warning: implicitly-declared ‘SafeVector >& SafeVector >::operator=(const SafeVector >&)’ is deprecated [-Wdeprecated-copy] 893 | emitPairs = VVF (256, VF (256, 1e-10)); | ^ In file included from Main.cc:7: SafeVector.h:29:3: note: because ‘SafeVector >’ has user-provided ‘SafeVector::SafeVector(const SafeVector&) [with TYPE = SafeVector]’ 29 | SafeVector (const SafeVector &source) : std::vector(source) {} | ^~~~~~~~~~ Main.cc:894:29: warning: implicitly-declared ‘SafeVector& SafeVector::operator=(const SafeVector&)’ is deprecated [-Wdeprecated-copy] 894 | emitSingle = VF (256, 1e-5); | ^ In file included from Main.cc:7: SafeVector.h:29:3: note: because ‘SafeVector’ has user-provided ‘SafeVector::SafeVector(const SafeVector&) [with TYPE = float]’ 29 | SafeVector (const SafeVector &source) : std::vector(source) {} | ^~~~~~~~~~ s390x-linux-gnu-g++ -O3 -W -Wall -pedantic -DNDEBUG -DNumInsertStates=1 -DVERSION="1.12" -funroll-loops -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -lm -o probcons-RNA Main-RNA.cc -Wl,-z,relro -Wl,-z,now In file included from MultiSequence.h:18, from Main-RNA.cc:8: Sequence.h: In member function ‘Sequence* Sequence::Clone() const’: Sequence.h:293:21: warning: implicitly-declared ‘SafeVector& SafeVector::operator=(const SafeVector&)’ is deprecated [-Wdeprecated-copy] 293 | *(ret->data) = *data; | ^~~~ In file included from Main-RNA.cc:7: SafeVector.h:29:3: note: because ‘SafeVector’ has user-provided ‘SafeVector::SafeVector(const SafeVector&) [with TYPE = char]’ 29 | SafeVector (const SafeVector &source) : std::vector(source) {} | ^~~~~~~~~~ In file included from Main-RNA.cc:11: ProbabilisticModel.h: In member function ‘void ProbabilisticModel::ComputeNewParameters(Sequence*, Sequence*, const VF&, const VF&, VF&, VF&, VF&, VVF&, VF&, bool) const’: ProbabilisticModel.h:493:31: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 493 | if (enableTrainEmissions && i != 1 || j != 1){ | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ ProbabilisticModel.h: In member function ‘VF* ProbabilisticModel::BuildPosterior(MultiSequence*, MultiSequence*, const SafeVector >&, float) const’: ProbabilisticModel.h:1027:18: warning: variable ‘postPtr’ set but not used [-Wunused-but-set-variable] 1027 | VF::iterator postPtr = posterior.begin(); | ^~~~~~~ Main-RNA.cc: In function ‘void PrintParameters(const char*, const VF&, const VF&, const VF&, const VVF&, const VF&, const char*)’: Main-RNA.cc:282:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 282 | for (int i = 0; i < NumMatrixTypes; i++) fprintf (file, "%.10f ", initDistrib[i]); fprintf (file, "\n"); | ^~~ Main-RNA.cc:282:88: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 282 | for (int i = 0; i < NumMatrixTypes; i++) fprintf (file, "%.10f ", initDistrib[i]); fprintf (file, "\n"); | ^~~~~~~ Main-RNA.cc:283:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 283 | for (int i = 0; i < 2*NumInsertStates; i++) fprintf (file, "%.10f ", gapOpen[i]); fprintf (file, "\n"); | ^~~ Main-RNA.cc:283:87: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 283 | for (int i = 0; i < 2*NumInsertStates; i++) fprintf (file, "%.10f ", gapOpen[i]); fprintf (file, "\n"); | ^~~~~~~ Main-RNA.cc:284:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 284 | for (int i = 0; i < 2*NumInsertStates; i++) fprintf (file, "%.10f ", gapExtend[i]); fprintf (file, "\n"); | ^~~ Main-RNA.cc:284:89: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 284 | for (int i = 0; i < 2*NumInsertStates; i++) fprintf (file, "%.10f ", gapExtend[i]); fprintf (file, "\n"); | ^~~~~~~ Main-RNA.cc: In function ‘MultiSequence* DoAlign(MultiSequence*, const ProbabilisticModel&, VF&, VF&, VF&, VVF&, VF&)’: Main-RNA.cc:400:6: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 400 | if (enableVerbose) | ^~ Main-RNA.cc:403:8: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 403 | delete alignment.first; | ^~~~~~ Main-RNA.cc: In function ‘void ReadParameters()’: Main-RNA.cc:893:40: warning: implicitly-declared ‘SafeVector >& SafeVector >::operator=(const SafeVector >&)’ is deprecated [-Wdeprecated-copy] 893 | emitPairs = VVF (256, VF (256, 1e-10)); | ^ In file included from Main-RNA.cc:7: SafeVector.h:29:3: note: because ‘SafeVector >’ has user-provided ‘SafeVector::SafeVector(const SafeVector&) [with TYPE = SafeVector]’ 29 | SafeVector (const SafeVector &source) : std::vector(source) {} | ^~~~~~~~~~ Main-RNA.cc:894:29: warning: implicitly-declared ‘SafeVector& SafeVector::operator=(const SafeVector&)’ is deprecated [-Wdeprecated-copy] 894 | emitSingle = VF (256, 1e-5); | ^ In file included from Main-RNA.cc:7: SafeVector.h:29:3: note: because ‘SafeVector’ has user-provided ‘SafeVector::SafeVector(const SafeVector&) [with TYPE = float]’ 29 | SafeVector (const SafeVector &source) : std::vector(source) {} | ^~~~~~~~~~ s390x-linux-gnu-g++ -O3 -W -Wall -pedantic -DNDEBUG -DNumInsertStates=2 -DVERSION="1.12" -funroll-loops -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -o pc-compare CompareToRef.cc -Wl,-z,relro -Wl,-z,now In file included from MultiSequence.h:18, from CompareToRef.cc:9: Sequence.h: In member function ‘Sequence* Sequence::Clone() const’: Sequence.h:293:21: warning: implicitly-declared ‘SafeVector& SafeVector::operator=(const SafeVector&)’ is deprecated [-Wdeprecated-copy] 293 | *(ret->data) = *data; | ^~~~ In file included from CompareToRef.cc:8: SafeVector.h:29:3: note: because ‘SafeVector’ has user-provided ‘SafeVector::SafeVector(const SafeVector&) [with TYPE = char]’ 29 | SafeVector (const SafeVector &source) : std::vector(source) {} | ^~~~~~~~~~ s390x-linux-gnu-g++ -O3 -W -Wall -pedantic -DNDEBUG -DNumInsertStates=2 -DVERSION="1.12" -funroll-loops -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -o pc-project ProjectPairwise.cc -Wl,-z,relro -Wl,-z,now In file included from MultiSequence.h:18, from ProjectPairwise.cc:9: Sequence.h: In member function ‘Sequence* Sequence::Clone() const’: Sequence.h:293:21: warning: implicitly-declared ‘SafeVector& SafeVector::operator=(const SafeVector&)’ is deprecated [-Wdeprecated-copy] 293 | *(ret->data) = *data; | ^~~~ In file included from ProjectPairwise.cc:8: SafeVector.h:29:3: note: because ‘SafeVector’ has user-provided ‘SafeVector::SafeVector(const SafeVector&) [with TYPE = char]’ 29 | SafeVector (const SafeVector &source) : std::vector(source) {} | ^~~~~~~~~~ s390x-linux-gnu-g++ -O3 -W -Wall -pedantic -DNDEBUG -DNumInsertStates=2 -DVERSION="1.12" -funroll-loops -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -o pc-makegnuplot MakeGnuPlot.cc -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_installdirs -a dh_auto_install -a dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_perl -a dh_perl: /usr/lib/s390x-linux-gnu/perl/cross-config-5.30.0/Config.pm does not exist (missing build dependency on perl-xs-dev?) debian/rules override_dh_link make[1]: Entering directory '/<>' rm -rf /<>/debian/probcons-extra/usr/share/doc/probcons-extra dh_link -p probcons-extra usr/share/doc/probcons usr/share/doc/probcons-extra make[1]: Leaving directory '/<>' dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'probcons' in '../probcons_1.12-12_s390x.deb'. dpkg-deb: building package 'probcons-dbgsym' in '../probcons-dbgsym_1.12-12_s390x.deb'. dpkg-deb: building package 'probcons-extra' in '../probcons-extra_1.12-12_s390x.deb'. dpkg-deb: building package 'probcons-extra-dbgsym' in '../probcons-extra-dbgsym_1.12-12_s390x.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../probcons_1.12-12_s390x.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-11-01T13:45:47Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ probcons_1.12-12_s390x.changes: ------------------------------- Format: 1.8 Date: Sun, 15 Jul 2018 15:11:26 +0200 Source: probcons Binary: probcons probcons-dbgsym probcons-extra probcons-extra-dbgsym Built-For-Profiles: cross nocheck Architecture: s390x Version: 1.12-12 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: probcons - PROBabilistic CONSistency-based multiple sequence alignment probcons-extra - Extra programs from the probcons package Changes: probcons (1.12-12) unstable; urgency=medium . [ Steffen Moeller ] * d/upstream/metadata: - Added references to registries - yamllint cleanliness . [ Andreas Tille ] * debhelper 11 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.5 * No Priiotity: extra for probcons-extra package Checksums-Sha1: 30b611ede10605e746574cf3384f1a4574981b03 1234332 probcons-dbgsym_1.12-12_s390x.deb 53cba1cb1bacf51c03ad149f039f81fcd8ceb4cb 460112 probcons-extra-dbgsym_1.12-12_s390x.deb 823a6241c61d3686fad83fc6469f6db2788823cc 33292 probcons-extra_1.12-12_s390x.deb efaa83b5c23e863fe9ff89da60b674d2b005dc33 5199 probcons_1.12-12_s390x.buildinfo 82f5f6faada9880b9bd83ce67e2472c7551fabc8 107344 probcons_1.12-12_s390x.deb Checksums-Sha256: 3cb06a241d077abe564333fd1cf0e497a9fec0bfc2dc22950cd68e53cabf3d8d 1234332 probcons-dbgsym_1.12-12_s390x.deb c8b70c0de4cd84532c7c438d4abd72e442519adc66eb70f5f5b417fd230b8047 460112 probcons-extra-dbgsym_1.12-12_s390x.deb 7dfe9df1f7bfc540422ea170a0316ddef80c8f3176ea9af79f4ac34b64b9131c 33292 probcons-extra_1.12-12_s390x.deb 3b644d4a667b2cc659005e9c5a0915bb09bd5d23947681990144c32e8789d35f 5199 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Build-Architecture: amd64 Build-Date: Fri, 01 Nov 2019 13:45:46 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.46), bash (= 5.0-4), binutils (= 2.33.1-2), binutils-common (= 2.33.1-2), binutils-x86-64-linux-gnu (= 2.33.1-2), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.34-0.1), build-essential (= 12.8), bzip2 (= 1.0.8-2), coreutils (= 8.30-3+b1), cpp (= 4:9.2.1-3.1), cpp-8 (= 8.3.0-23), cpp-9 (= 9.2.1-16), dash (= 0.5.10.2-6), debconf (= 1.5.73), debhelper (= 12.7.1), debianutils (= 4.9), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.6.1-1), diffutils (= 1:3.7-3), dpkg (= 1.19.7), dpkg-dev (= 1.19.7), dwz (= 0.13-1), fdisk (= 2.34-0.1), file (= 1:5.37-6), findutils (= 4.7.0-1), g++ (= 4:9.2.1-3.1), g++-9 (= 9.2.1-16), gcc (= 4:9.2.1-3.1), gcc-8 (= 8.3.0-23), gcc-8-base (= 8.3.0-23), gcc-9 (= 9.2.1-16), gcc-9-base (= 9.2.1-16), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), grep (= 3.3-1), groff-base (= 1.22.4-3), gzip (= 1.9-3+b1), hostname (= 3.22+b1), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-5), libarchive-zip-perl (= 1.67-1), libasan5 (= 9.2.1-16), libatomic1 (= 9.2.1-16), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-2), libaudit1 (= 1:2.8.5-2), libbinutils (= 2.33.1-2), libblkid1 (= 2.34-0.1), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.8-2), libc-bin (= 2.29-2), libc-dev-bin (= 2.29-2), libc6 (= 2.29-2), libc6-dev (= 2.29-2), libcap-ng0 (= 0.7.9-2.1), libcc1-0 (= 9.2.1-16), libcroco3 (= 0.6.13-1), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.250), libdebhelper-perl (= 12.7.1), libdpkg-perl (= 1.19.7), libelf1 (= 0.176-1.1), libfdisk1 (= 2.34-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.6.1-1), libgcc-8-dev (= 8.3.0-23), libgcc-9-dev (= 9.2.1-16), libgcc1 (= 1:9.2.1-16), libgcrypt20 (= 1.8.5-3), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libglib2.0-0 (= 2.62.2-2), libgmp10 (= 2:6.1.2+dfsg-4), libgomp1 (= 9.2.1-16), libgpg-error0 (= 1.36-7), libicu63 (= 63.2-2), libisl21 (= 0.21-2), libitm1 (= 9.2.1-16), liblsan0 (= 9.2.1-16), liblz4-1 (= 1.9.1-2), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.37-6), libmagic1 (= 1:5.37-6), libmount1 (= 2.34-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-23), libncurses6 (= 6.1+20191019-1), libncursesw6 (= 6.1+20191019-1), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.32-5+b1), libpcre3 (= 2:8.39-12+b1), libperl5.30 (= 5.30.0-9), libpipeline1 (= 1.5.1-2), libquadmath0 (= 9.2.1-16), libseccomp2 (= 2.4.1-2), libselinux1 (= 2.9-2+b2), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.34-0.1), libstdc++-9-dev (= 9.2.1-16), libstdc++6 (= 9.2.1-16), libsub-override-perl (= 0.09-2), libsystemd0 (= 242-7), libtinfo6 (= 6.1+20191019-1), libtool (= 2.4.6-11), libtsan0 (= 9.2.1-16), libubsan1 (= 9.2.1-16), libuchardet0 (= 0.0.6-3), libudev1 (= 242-7), libunistring2 (= 0.9.10-2), libuuid1 (= 2.34-0.1), libxml2 (= 2.9.4+dfsg1-7+b3), linux-libc-dev (= 5.3.7-1), login (= 1:4.7-2), lsb-base (= 11.1.0), m4 (= 1.4.18-2), make (= 4.2.1-1.2), man-db (= 2.9.0-1), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20191019-1), ncurses-bin (= 6.1+20191019-1), patch (= 2.7.6-6), perl (= 5.30.0-9), perl-base (= 5.30.0-9), perl-modules-5.30 (= 5.30.0-9), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.96-1), tar (= 1.30+dfsg-6+b1), util-linux (= 2.34-0.1), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-1+b1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1531660286" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ probcons-dbgsym_1.12-12_s390x.deb --------------------------------- new Debian package, version 2.0. size 1234332 bytes: control archive=600 bytes. 416 bytes, 12 lines control 212 bytes, 2 lines md5sums Package: probcons-dbgsym Source: probcons Version: 1.12-12 Auto-Built-Package: debug-symbols Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 1268 Depends: probcons (= 1.12-12) Section: debug Priority: optional Description: debug symbols for probcons Build-Ids: 080aa4e360b1a78d6934c2eef0c4574627fdd8c6 0dcf8d1ddb21a58a4f988cf65dd1bac47aef8c49 drwxr-xr-x root/root 0 2018-07-15 13:11 ./ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/lib/ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/lib/debug/ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/lib/debug/.build-id/08/ -rw-r--r-- root/root 649000 2018-07-15 13:11 ./usr/lib/debug/.build-id/08/0aa4e360b1a78d6934c2eef0c4574627fdd8c6.debug drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/lib/debug/.build-id/0d/ -rw-r--r-- root/root 637928 2018-07-15 13:11 ./usr/lib/debug/.build-id/0d/cf8d1ddb21a58a4f988cf65dd1bac47aef8c49.debug drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/share/ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/share/doc/ lrwxrwxrwx root/root 0 2018-07-15 13:11 ./usr/share/doc/probcons-dbgsym -> probcons probcons-extra-dbgsym_1.12-12_s390x.deb --------------------------------------- new Debian package, version 2.0. size 460112 bytes: control archive=656 bytes. 474 bytes, 12 lines control 318 bytes, 3 lines md5sums Package: probcons-extra-dbgsym Source: probcons Version: 1.12-12 Auto-Built-Package: debug-symbols Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 491 Depends: probcons-extra (= 1.12-12) Section: debug Priority: optional Description: debug symbols for probcons-extra Build-Ids: 24b906806b86a61b3d32f189836d5ca75d613ecf bf119da0dd473cc85756b819ef01b71cc691530a fb1379b8e9a02a34e196222251ae649e3e5c05c0 drwxr-xr-x root/root 0 2018-07-15 13:11 ./ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/lib/ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/lib/debug/ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/lib/debug/.build-id/24/ -rw-r--r-- root/root 22512 2018-07-15 13:11 ./usr/lib/debug/.build-id/24/b906806b86a61b3d32f189836d5ca75d613ecf.debug drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/lib/debug/.build-id/bf/ -rw-r--r-- root/root 191008 2018-07-15 13:11 ./usr/lib/debug/.build-id/bf/119da0dd473cc85756b819ef01b71cc691530a.debug drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/lib/debug/.build-id/fb/ -rw-r--r-- root/root 276136 2018-07-15 13:11 ./usr/lib/debug/.build-id/fb/1379b8e9a02a34e196222251ae649e3e5c05c0.debug drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/share/ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/share/doc/ lrwxrwxrwx root/root 0 2018-07-15 13:11 ./usr/share/doc/probcons-extra-dbgsym -> probcons-extra probcons-extra_1.12-12_s390x.deb -------------------------------- new Debian package, version 2.0. size 33292 bytes: control archive=932 bytes. 840 bytes, 20 lines control 374 bytes, 6 lines md5sums Package: probcons-extra Source: probcons Version: 1.12-12 Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 121 Depends: probcons (= 1.12-12), libc6 (>= 2.7), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2) Suggests: gnuplot-nox | gnuplot-x11 Section: science Priority: optional Homepage: http://probcons.stanford.edu/ Description: Extra programs from the probcons package Contains the convert, project and makgnuplot programs from the probcons package, which have been renamed to pc-compare, pc-project and pc-makegnuplot respectively to avoid collisions with other program names. These programs are mostly useful for testing purposes and are not required for the normal usage of Probcons. . Probcons is a tool for generating multiple alignments of protein sequences. drwxr-xr-x root/root 0 2018-07-15 13:11 ./ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/bin/ -rwxr-xr-x root/root 59472 2018-07-15 13:11 ./usr/bin/pc-compare -rwxr-xr-x root/root 10320 2018-07-15 13:11 ./usr/bin/pc-makegnuplot -rwxr-xr-x root/root 39000 2018-07-15 13:11 ./usr/bin/pc-project drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/share/ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/share/doc/ lrwxrwxrwx root/root 0 2018-07-15 13:11 ./usr/share/doc/probcons-extra -> probcons drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/share/man/ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/share/man/man1/ -rw-r--r-- root/root 965 2018-07-15 13:11 ./usr/share/man/man1/pc-compare.1.gz -rw-r--r-- root/root 878 2018-07-15 13:11 ./usr/share/man/man1/pc-makegnuplot.1.gz -rw-r--r-- root/root 884 2018-07-15 13:11 ./usr/share/man/man1/pc-project.1.gz probcons_1.12-12_s390x.deb -------------------------- new Debian package, version 2.0. size 107344 bytes: control archive=1096 bytes. 1007 bytes, 20 lines control 603 bytes, 9 lines md5sums Package: probcons Version: 1.12-12 Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 402 Depends: libc6 (>= 2.27), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2) Suggests: probcons-extra Enhances: t-coffee Section: science Priority: optional Homepage: http://probcons.stanford.edu/ Description: PROBabilistic CONSistency-based multiple sequence alignment Tool for generating multiple alignments of protein sequences. Using a combination of probabilistic modeling and consistency-based alignment techniques, PROBCONS has achieved the highest accuracies of all alignment methods to date. On the BAliBASE benchmark alignment database, alignments produced by PROBCONS show statistically significant improvement over current programs, containing an average of 7% more correctly aligned columns than those of T-Coffee, 11% more correctly aligned columns than those of CLUSTAL W, and 14% more correctly aligned columns than those of DIALIGN. drwxr-xr-x root/root 0 2018-07-15 13:11 ./ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/bin/ -rwxr-xr-x root/root 200504 2018-07-15 13:11 ./usr/bin/probcons -rwxr-xr-x root/root 186704 2018-07-15 13:11 ./usr/bin/probcons-RNA drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/share/ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/share/doc/probcons/ -rw-r--r-- root/root 749 2018-07-15 13:11 ./usr/share/doc/probcons/README.Debian -rw-r--r-- root/root 1764 2007-04-03 17:39 ./usr/share/doc/probcons/README.gz -rw-r--r-- root/root 2075 2018-07-15 13:11 ./usr/share/doc/probcons/changelog.Debian.gz -rw-r--r-- root/root 995 2018-07-15 13:11 ./usr/share/doc/probcons/copyright drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/share/doc/probcons/examples/ -rw-r--r-- root/root 2269 2018-07-15 13:11 ./usr/share/doc/probcons/examples/example.fa drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/share/man/ drwxr-xr-x root/root 0 2018-07-15 13:11 ./usr/share/man/man1/ -rw-r--r-- root/root 865 2018-07-15 13:11 ./usr/share/man/man1/probcons-RNA.1.gz -rw-r--r-- root/root 1801 2018-07-15 13:11 ./usr/share/man/man1/probcons.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [532 B] Get:5 copy:/<>/apt_archive ./ Packages [620 B] Fetched 2115 B in 0s (123 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl libclone-perl libdevel-callchecker-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmldbm-perl libmodule-runtime-perl libmoo-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libdata-dump-perl ca-certificates libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libfreezethaw-perl libclass-xsaccessor-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libunicode-utf8-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl libclone-perl libdevel-callchecker-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmldbm-perl libmodule-runtime-perl libmoo-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:s390x t1utils 0 upgraded, 67 newly installed, 0 to remove and 0 not upgraded. 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I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 12244 Build-Time: 44 Distribution: unstable Foreign Architectures: s390x Host Architecture: s390x Install-Time: 16 Job: probcons_1.12-12 Lintian: pass Machine Architecture: amd64 Package: probcons Package-Time: 72 Source-Version: 1.12-12 Space: 12244 Status: successful Version: 1.12-12 -------------------------------------------------------------------------------- Finished at 2019-11-01T13:45:47Z Build needed 00:01:12, 12244k disk space