sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on gcc131.bak.milne.osuosl.org +==============================================================================+ | prodigal 1:2.6.3-4 (armhf) Fri, 08 Feb 2019 19:10:23 +0000 | +==============================================================================+ Package: prodigal Version: 1:2.6.3-4 Source Version: 1:2.6.3-4 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-1e83c42b-a024-484a-9c9c-42813140d796' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [243 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-02-08-0813.48.pdiff [6912 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-02-08-1410.57.pdiff [17.5 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-02-08-1410.57.pdiff [17.5 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-02-08-0813.48.pdiff [34.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-02-08-1410.57.pdiff [19.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-02-08-1410.57.pdiff [19.9 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main armhf Packages [8092 kB] Fetched 8470 kB in 2s (4966 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: binutils binutils-common binutils-x86-64-linux-gnu libbinutils 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 4432 kB of archives. After this operation, 7168 B of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-x86-64-linux-gnu amd64 2.31.1-12 [1825 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 binutils amd64 2.31.1-12 [56.4 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libbinutils amd64 2.31.1-12 [479 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-common amd64 2.31.1-12 [2072 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 4432 kB in 0s (80.8 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11799 files and directories currently installed.) Preparing to unpack .../binutils-x86-64-linux-gnu_2.31.1-12_amd64.deb ... Unpacking binutils-x86-64-linux-gnu (2.31.1-12) over (2.31.1-11) ... Preparing to unpack .../binutils_2.31.1-12_amd64.deb ... Unpacking binutils (2.31.1-12) over (2.31.1-11) ... Preparing to unpack .../libbinutils_2.31.1-12_amd64.deb ... Unpacking libbinutils:amd64 (2.31.1-12) over (2.31.1-11) ... Preparing to unpack .../binutils-common_2.31.1-12_amd64.deb ... Unpacking binutils-common:amd64 (2.31.1-12) over (2.31.1-11) ... Setting up binutils-common:amd64 (2.31.1-12) ... Setting up libbinutils:amd64 (2.31.1-12) ... Setting up binutils-x86-64-linux-gnu (2.31.1-12) ... Setting up binutils (2.31.1-12) ... Processing triggers for libc-bin (2.28-6) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'prodigal' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/prodigal.git Please use: git clone https://salsa.debian.org/med-team/prodigal.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 662 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main prodigal 1:2.6.3-4 (dsc) [1987 B] Get:2 http://debian.oregonstate.edu/debian unstable/main prodigal 1:2.6.3-4 (tar) [611 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main prodigal 1:2.6.3-4 (diff) [49.0 kB] Fetched 662 kB in 0s (1839 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/prodigal-4ZoF57/prodigal-2.6.3' with '<>' I: NOTICE: Log filtering will replace 'build/prodigal-4ZoF57' with '<>' +------------------------------------------------------------------------------+ | Install crossbuild-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64 Filtered Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64 dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-e1dDCi/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-e1dDCi/apt_archive ./ InRelease Get:2 copy:/<>/resolver-e1dDCi/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-e1dDCi/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-e1dDCi/apt_archive ./ Sources [363 B] Get:5 copy:/<>/resolver-e1dDCi/apt_archive ./ Packages [451 B] Fetched 1771 B in 0s (96.9 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils-arm-linux-gnueabihf cpp-8-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf dpkg-cross file g++-8-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf-base gcc-8-cross-base gcc-arm-linux-gnueabihf libasan5-armhf-cross libatomic1-armhf-cross libc6-armhf-cross libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-armhf-cross libgcc1-armhf-cross libgomp1-armhf-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-armhf-cross libstdc++6-armhf-cross libubsan1-armhf-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-armhf-cross sensible-utils ucf Suggested packages: binutils-doc gcc-8-locales cpp-doc binutils-multiarch gcc-8-doc libstdc++6-8-dbg-armhf-cross libgcc1-dbg-armhf-cross libgomp1-dbg-armhf-cross libitm1-dbg-armhf-cross libatomic1-dbg-armhf-cross libasan5-dbg-armhf-cross liblsan0-dbg-armhf-cross libtsan0-dbg-armhf-cross libubsan1-dbg-armhf-cross libmpx2-dbg-armhf-cross libquadmath0-dbg-armhf-cross manpages-dev autoconf automake libtool flex bison gdb-arm-linux-gnueabihf gcc-doc libyaml-shell-perl Recommended packages: libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl The following NEW packages will be installed: binutils-arm-linux-gnueabihf cpp-8-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf dpkg-cross file g++-8-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf-base gcc-8-cross-base gcc-arm-linux-gnueabihf libasan5-armhf-cross libatomic1-armhf-cross libc6-armhf-cross libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-armhf-cross libgcc1-armhf-cross libgomp1-armhf-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-armhf-cross libstdc++6-armhf-cross libubsan1-armhf-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-armhf-cross sbuild-build-depends-core-dummy:armhf sensible-utils ucf 0 upgraded, 44 newly installed, 0 to remove and 0 not upgraded. Need to get 41.7 MB of archives. After this operation, 152 MB of additional disk space will be used. Get:1 copy:/<>/resolver-e1dDCi/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [876 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.35-2 [242 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.35-2 [117 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.35-2 [66.1 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabihf amd64 2.31.1-12 [2832 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-arm-linux-gnueabihf-base amd64 8.2.0-11cross1 [188 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-8-arm-linux-gnueabihf amd64 8.2.0-11cross1 [6550 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabihf amd64 4:8.2.0-2 [16.4 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-2 [39.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-cross-base all 8.2.0-11cross1 [183 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armhf-cross all 2.28-4cross1 [1170 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-armhf-cross all 1:8.2.0-11cross1 [37.1 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armhf-cross all 8.2.0-11cross1 [63.2 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armhf-cross all 8.2.0-11cross1 [6568 B] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armhf-cross all 8.2.0-11cross1 [301 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-armhf-cross all 8.2.0-11cross1 [330 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armhf-cross all 8.2.0-11cross1 [104 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-8-dev-armhf-cross all 8.2.0-11cross1 [613 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-arm-linux-gnueabihf amd64 8.2.0-11cross1 [6960 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabihf amd64 4:8.2.0-2 [1456 B] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armhf-cross all 4.19.13-1cross1 [1196 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armhf-cross all 2.28-4cross1 [2148 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-8-dev-armhf-cross all 8.2.0-11cross1 [1547 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 g++-8-arm-linux-gnueabihf amd64 8.2.0-11cross1 [7125 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabihf amd64 4:8.2.0-2 [1180 B] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.1-6 [8292 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.00+dfsg-1 [58.6 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0133+dfsg-1 [344 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.27-1 [66.8 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-2 [38.5 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-2 [49.3 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armhf all 12.5 [6544 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 41.7 MB in 1s (56.4 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11799 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-3+b4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-3+b4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.35-2_amd64.deb ... Unpacking libmagic-mgc (1:5.35-2) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.35-2_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-2) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.35-2_amd64.deb ... Unpacking file (1:5.35-2) ... Selecting previously unselected package ucf. Preparing to unpack .../05-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package binutils-arm-linux-gnueabihf. Preparing to unpack .../06-binutils-arm-linux-gnueabihf_2.31.1-12_amd64.deb ... Unpacking binutils-arm-linux-gnueabihf (2.31.1-12) ... Selecting previously unselected package gcc-8-arm-linux-gnueabihf-base:amd64. Preparing to unpack .../07-gcc-8-arm-linux-gnueabihf-base_8.2.0-11cross1_amd64.deb ... Unpacking gcc-8-arm-linux-gnueabihf-base:amd64 (8.2.0-11cross1) ... Selecting previously unselected package cpp-8-arm-linux-gnueabihf. Preparing to unpack .../08-cpp-8-arm-linux-gnueabihf_8.2.0-11cross1_amd64.deb ... Unpacking cpp-8-arm-linux-gnueabihf (8.2.0-11cross1) ... Selecting previously unselected package cpp-arm-linux-gnueabihf. Preparing to unpack .../09-cpp-arm-linux-gnueabihf_4%3a8.2.0-2_amd64.deb ... Unpacking cpp-arm-linux-gnueabihf (4:8.2.0-2) ... Selecting previously unselected package cross-config. Preparing to unpack .../10-cross-config_2.6.15-2_all.deb ... Unpacking cross-config (2.6.15-2) ... Selecting previously unselected package gcc-8-cross-base. Preparing to unpack .../11-gcc-8-cross-base_8.2.0-11cross1_all.deb ... Unpacking gcc-8-cross-base (8.2.0-11cross1) ... Selecting previously unselected package libc6-armhf-cross. Preparing to unpack .../12-libc6-armhf-cross_2.28-4cross1_all.deb ... Unpacking libc6-armhf-cross (2.28-4cross1) ... Selecting previously unselected package libgcc1-armhf-cross. Preparing to unpack .../13-libgcc1-armhf-cross_1%3a8.2.0-11cross1_all.deb ... Unpacking libgcc1-armhf-cross (1:8.2.0-11cross1) ... Selecting previously unselected package libgomp1-armhf-cross. Preparing to unpack .../14-libgomp1-armhf-cross_8.2.0-11cross1_all.deb ... Unpacking libgomp1-armhf-cross (8.2.0-11cross1) ... Selecting previously unselected package libatomic1-armhf-cross. Preparing to unpack .../15-libatomic1-armhf-cross_8.2.0-11cross1_all.deb ... Unpacking libatomic1-armhf-cross (8.2.0-11cross1) ... Selecting previously unselected package libstdc++6-armhf-cross. Preparing to unpack .../16-libstdc++6-armhf-cross_8.2.0-11cross1_all.deb ... Unpacking libstdc++6-armhf-cross (8.2.0-11cross1) ... Selecting previously unselected package libasan5-armhf-cross. Preparing to unpack .../17-libasan5-armhf-cross_8.2.0-11cross1_all.deb ... Unpacking libasan5-armhf-cross (8.2.0-11cross1) ... Selecting previously unselected package libubsan1-armhf-cross. Preparing to unpack .../18-libubsan1-armhf-cross_8.2.0-11cross1_all.deb ... Unpacking libubsan1-armhf-cross (8.2.0-11cross1) ... Selecting previously unselected package libgcc-8-dev-armhf-cross. Preparing to unpack .../19-libgcc-8-dev-armhf-cross_8.2.0-11cross1_all.deb ... Unpacking libgcc-8-dev-armhf-cross (8.2.0-11cross1) ... Selecting previously unselected package gcc-8-arm-linux-gnueabihf. Preparing to unpack .../20-gcc-8-arm-linux-gnueabihf_8.2.0-11cross1_amd64.deb ... Unpacking gcc-8-arm-linux-gnueabihf (8.2.0-11cross1) ... Selecting previously unselected package gcc-arm-linux-gnueabihf. 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Preparing to unpack .../31-libxml-namespacesupport-perl_1.12-1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../32-libxml-sax-base-perl_1.09-1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../33-libxml-sax-perl_1.00+dfsg-1_all.deb ... Unpacking libxml-sax-perl (1.00+dfsg-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../34-libxml-libxml-perl_2.0133+dfsg-1_amd64.deb ... Unpacking libxml-libxml-perl (2.0133+dfsg-1) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../35-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../36-libyaml-perl_1.27-1_all.deb ... Unpacking libyaml-perl (1.27-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../37-libconfig-auto-perl_0.44-1_all.deb ... Unpacking libconfig-auto-perl (0.44-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../38-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../39-libfile-homedir-perl_1.004-1_all.deb ... Unpacking libfile-homedir-perl (1.004-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../40-libdebian-dpkgcross-perl_2.6.15-2_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-2) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../41-dpkg-cross_2.6.15-2_all.deb ... Unpacking dpkg-cross (2.6.15-2) ... Selecting previously unselected package crossbuild-essential-armhf. Preparing to unpack .../42-crossbuild-essential-armhf_12.5_all.deb ... Unpacking crossbuild-essential-armhf (12.5) ... Selecting previously unselected package sbuild-build-depends-core-dummy:armhf. Preparing to unpack .../43-sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy:armhf (0.invalid.0) ... Setting up gcc-8-cross-base (8.2.0-11cross1) ... Setting up libc6-armhf-cross (2.28-4cross1) ... Setting up libgcc1-armhf-cross (1:8.2.0-11cross1) ... Setting up libstdc++6-armhf-cross (8.2.0-11cross1) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up libicu63:amd64 (63.1-6) ... Setting up libfile-which-perl (1.23-1) ... Setting up libubsan1-armhf-cross (8.2.0-11cross1) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up binutils-arm-linux-gnueabihf (2.31.1-12) ... Setting up libyaml-perl (1.27-1) ... Setting up libgomp1-armhf-cross (8.2.0-11cross1) ... Setting up linux-libc-dev-armhf-cross (4.19.13-1cross1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up libatomic1-armhf-cross (8.2.0-11cross1) ... Setting up libmagic-mgc (1:5.35-2) ... Setting up libmagic1:amd64 (1:5.35-2) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up sensible-utils (0.0.12) ... Setting up cross-config (2.6.15-2) ... Setting up libio-string-perl (1.08-3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up gcc-8-arm-linux-gnueabihf-base:amd64 (8.2.0-11cross1) ... Setting up libasan5-armhf-cross (8.2.0-11cross1) ... Setting up libgcc-8-dev-armhf-cross (8.2.0-11cross1) ... Setting up libc6-dev-armhf-cross (2.28-4cross1) ... Setting up file (1:5.35-2) ... Setting up ucf (3.0038+nmu1) ... Setting up libstdc++-8-dev-armhf-cross (8.2.0-11cross1) ... Setting up cpp-8-arm-linux-gnueabihf (8.2.0-11cross1) ... Setting up cpp-arm-linux-gnueabihf (4:8.2.0-2) ... Setting up gcc-8-arm-linux-gnueabihf (8.2.0-11cross1) ... Setting up gcc-arm-linux-gnueabihf (4:8.2.0-2) ... Setting up libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-8-arm-linux-gnueabihf (8.2.0-11cross1) ... Setting up libxml-libxml-perl (2.0133+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-arm-linux-gnueabihf (4:8.2.0-2) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-2) ... Setting up dpkg-cross (2.6.15-2) ... Setting up crossbuild-essential-armhf (12.5) ... Setting up sbuild-build-depends-core-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.28-6) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) Setup apt archive ----------------- dpkg-deb: building package 'sbuild-build-depends-essential-dummy' in '/<>/resolver-e1dDCi/apt_archive/sbuild-build-depends-essential-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-e1dDCi/apt_archive ./ InRelease Get:2 copy:/<>/resolver-e1dDCi/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-e1dDCi/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-e1dDCi/apt_archive ./ Sources [485 B] Get:5 copy:/<>/resolver-e1dDCi/apt_archive ./ Packages [571 B] Fetched 2019 B in 0s (151 kB/s) Reading package lists... Reading package lists... Install essential build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-essential-dummy:armhf 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 840 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-e1dDCi/apt_archive ./ sbuild-build-depends-essential-dummy 0.invalid.0 [840 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 840 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-essential-dummy:armhf. (Reading database ... 14845 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-essential-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-essential-dummy:armhf (0.invalid.0) ... Setting up sbuild-build-depends-essential-dummy:armhf (0.invalid.0) ... +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~) Filtered Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~) dpkg-deb: building package 'sbuild-build-depends-prodigal-dummy' in '/<>/resolver-e1dDCi/apt_archive/sbuild-build-depends-prodigal-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-prodigal-dummy dpkg-scanpackages: info: Wrote 3 entries to output Packages file. Ign:1 copy:/<>/resolver-e1dDCi/apt_archive ./ InRelease Get:2 copy:/<>/resolver-e1dDCi/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-e1dDCi/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-e1dDCi/apt_archive ./ Sources [636 B] Get:5 copy:/<>/resolver-e1dDCi/apt_archive ./ Packages [715 B] Fetched 2314 B in 0s (0 B/s) Reading package lists... Reading package lists... Install prodigal build dependencies (apt-based resolver) -------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:armhf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libatomic1:armhf libbsd0 libc6:armhf libc6-dev:armhf libcroco3 libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:armhf libgcc1:armhf libglib2.0-0 libgomp1:armhf libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:armhf libstdc++6:armhf libtool libubsan1:armhf libuchardet0 linux-libc-dev:armhf m4 man-db po-debconf Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armhf libc-l10n:armhf locales:armhf manpages-dev:armhf libstdc++-8-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:armhf libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpm2 libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:armhf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libatomic1:armhf libbsd0 libc6:armhf libc6-dev:armhf libcroco3 libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:armhf libgcc1:armhf libglib2.0-0 libgomp1:armhf libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:armhf libstdc++6:armhf libtool libubsan1:armhf libuchardet0 linux-libc-dev:armhf m4 man-db po-debconf sbuild-build-depends-prodigal-dummy:armhf 0 upgraded, 40 newly installed, 0 to remove and 0 not upgraded. Need to get 18.5 MB of archives. After this operation, 79.1 MB of additional disk space will be used. Get:1 copy:/<>/resolver-e1dDCi/apt_archive ./ sbuild-build-depends-prodigal-dummy 0.invalid.0 [876 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.9.1-1 [99.3 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-2 [917 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-1 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.5-1 [1274 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-9 [547 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.1.0-1 [19.5 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.1.0-1 [12.6 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.175-2 [160 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.12-3 [78.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.58.3-1 [1258 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20181013-1 [102 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12 [1002 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main armhf gcc-8-base armhf 8.2.0-17 [189 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main armhf libgcc1 armhf 1:8.2.0-17 [37.2 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main armhf libc6 armhf 2.28-6 [2387 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++6 armhf 8.2.0-17 [337 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main armhf libasan5 armhf 8.2.0-17 [337 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main armhf libatomic1 armhf 8.2.0-17 [6736 B] Get:35 http://debian.oregonstate.edu/debian unstable/main armhf linux-libc-dev armhf 4.19.16-1 [1113 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main armhf libc6-dev armhf 2.28-6 [2151 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main armhf libgomp1 armhf 8.2.0-17 [64.7 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main armhf libubsan1 armhf 8.2.0-17 [105 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-8-dev armhf 8.2.0-17 [613 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++-8-dev armhf 8.2.0-17 [1579 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 18.5 MB in 0s (73.3 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 14845 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-1_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-2_amd64.deb ... Unpacking groff-base (1.22.4-2) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-1) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-1_amd64.deb ... Unpacking man-db (2.8.5-1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.19.8.1-9_amd64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../07-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../08-m4_1.4.18-2_amd64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../09-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../10-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../11-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../12-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package libtool. Preparing to unpack .../13-libtool_2.4.6-9_all.deb ... Unpacking libtool (2.4.6-9) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../14-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../15-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../16-libfile-stripnondeterminism-perl_1.1.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../17-dh-strip-nondeterminism_1.1.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.0-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../18-libelf1_0.175-2_amd64.deb ... Unpacking libelf1:amd64 (0.175-2) ... Selecting previously unselected package dwz. Preparing to unpack .../19-dwz_0.12-3_amd64.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../20-libglib2.0-0_2.58.3-1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.58.3-1) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../21-libcroco3_0.6.12-3_amd64.deb ... Unpacking libcroco3:amd64 (0.6.12-3) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../22-libncurses6_6.1+20181013-1_amd64.deb ... Unpacking libncurses6:amd64 (6.1+20181013-1) ... Selecting previously unselected package gettext. Preparing to unpack .../23-gettext_0.19.8.1-9_amd64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../24-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../25-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../26-debhelper_12_all.deb ... Unpacking debhelper (12) ... Selecting previously unselected package gcc-8-base:armhf. Preparing to unpack .../27-gcc-8-base_8.2.0-17_armhf.deb ... Unpacking gcc-8-base:armhf (8.2.0-17) ... Selecting previously unselected package libgcc1:armhf. Preparing to unpack .../28-libgcc1_1%3a8.2.0-17_armhf.deb ... Unpacking libgcc1:armhf (1:8.2.0-17) ... Selecting previously unselected package libc6:armhf. Preparing to unpack .../29-libc6_2.28-6_armhf.deb ... Unpacking libc6:armhf (2.28-6) ... Selecting previously unselected package libstdc++6:armhf. Preparing to unpack .../30-libstdc++6_8.2.0-17_armhf.deb ... Unpacking libstdc++6:armhf (8.2.0-17) ... Selecting previously unselected package libasan5:armhf. Preparing to unpack .../31-libasan5_8.2.0-17_armhf.deb ... Unpacking libasan5:armhf (8.2.0-17) ... Selecting previously unselected package libatomic1:armhf. Preparing to unpack .../32-libatomic1_8.2.0-17_armhf.deb ... Unpacking libatomic1:armhf (8.2.0-17) ... Selecting previously unselected package linux-libc-dev:armhf. Preparing to unpack .../33-linux-libc-dev_4.19.16-1_armhf.deb ... Unpacking linux-libc-dev:armhf (4.19.16-1) ... Selecting previously unselected package libc6-dev:armhf. Preparing to unpack .../34-libc6-dev_2.28-6_armhf.deb ... Unpacking libc6-dev:armhf (2.28-6) ... Selecting previously unselected package libgomp1:armhf. Preparing to unpack .../35-libgomp1_8.2.0-17_armhf.deb ... Unpacking libgomp1:armhf (8.2.0-17) ... Selecting previously unselected package libubsan1:armhf. Preparing to unpack .../36-libubsan1_8.2.0-17_armhf.deb ... Unpacking libubsan1:armhf (8.2.0-17) ... Selecting previously unselected package libgcc-8-dev:armhf. Preparing to unpack .../37-libgcc-8-dev_8.2.0-17_armhf.deb ... Unpacking libgcc-8-dev:armhf (8.2.0-17) ... Selecting previously unselected package libstdc++-8-dev:armhf. Preparing to unpack .../38-libstdc++-8-dev_8.2.0-17_armhf.deb ... Unpacking libstdc++-8-dev:armhf (8.2.0-17) ... Selecting previously unselected package sbuild-build-depends-prodigal-dummy:armhf. Preparing to unpack .../39-sbuild-build-depends-prodigal-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-prodigal-dummy:armhf (0.invalid.0) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libelf1:amd64 (0.175-2) ... Setting up libglib2.0-0:amd64 (2.58.3-1) ... No schema files found: doing nothing. Setting up linux-libc-dev:armhf (4.19.16-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up libpipeline1:amd64 (1.5.1-1) ... Setting up m4 (1.4.18-2) ... Setting up libbsd0:amd64 (0.9.1-1) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up dwz (0.12-3) ... Setting up autotools-dev (20180224.1) ... Setting up gcc-8-base:armhf (8.2.0-17) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libncurses6:amd64 (6.1+20181013-1) ... Setting up autopoint (0.19.8.1-9) ... Setting up libfile-stripnondeterminism-perl (1.1.0-1) ... Setting up libtool (2.4.6-9) ... Setting up gettext (0.19.8.1-9) ... Setting up groff-base (1.22.4-2) ... Setting up autoconf (2.69-11) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up man-db (2.8.5-1) ... Not building database; man-db/auto-update is not 'true'. Setting up po-debconf (1.0.21) ... Setting up libc6:armhf (2.28-6) ... Setting up libc6-dev:armhf (2.28-6) ... Setting up libgcc1:armhf (1:8.2.0-17) ... Setting up libgomp1:armhf (8.2.0-17) ... Setting up libatomic1:armhf (8.2.0-17) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.0-1) ... Setting up libstdc++6:armhf (8.2.0-17) ... Setting up libasan5:armhf (8.2.0-17) ... Setting up libubsan1:armhf (8.2.0-17) ... Setting up debhelper (12) ... Setting up libgcc-8-dev:armhf (8.2.0-17) ... Setting up libstdc++-8-dev:armhf (8.2.0-17) ... Setting up sbuild-build-depends-prodigal-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.28-6) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.31.1-12 dpkg-dev_1.19.4 g++-8_8.2.0-17 gcc-8_8.2.0-17 libc6-dev_2.28-6 libstdc++-8-dev_8.2.0-17 libstdc++-8-dev-armhf-cross_8.2.0-11cross1 libstdc++6_8.2.0-17 libstdc++6-armhf-cross_8.2.0-11cross1 linux-libc-dev_4.19.16-1 Package versions: adduser_3.118 apt_1.8.0~rc2 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1 base-passwd_3.5.45 bash_5.0-2 binutils_2.31.1-12 binutils-arm-linux-gnueabihf_2.31.1-12 binutils-common_2.31.1-12 binutils-x86-64-linux-gnu_2.31.1-12 bsdmainutils_11.1.2+b1 bsdutils_1:2.33.1-0.1 build-essential_12.5 bzip2_1.0.6-9 coreutils_8.30-1 cpp_4:8.2.0-2 cpp-8_8.2.0-17 cpp-8-arm-linux-gnueabihf_8.2.0-11cross1 cpp-arm-linux-gnueabihf_4:8.2.0-2 cross-config_2.6.15-2 crossbuild-essential-armhf_12.5 dash_0.5.10.2-5 debconf_1.5.70 debhelper_12 debian-archive-keyring_2018.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-strip-nondeterminism_1.1.0-1 diffutils_1:3.6-1 dpkg_1.19.4 dpkg-cross_2.6.15-2 dpkg-dev_1.19.4 dwz_0.12-3 e2fsprogs_1.44.5-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-2 findutils_4.6.0+git+20190105-2 g++_4:8.2.0-2 g++-8_8.2.0-17 g++-8-arm-linux-gnueabihf_8.2.0-11cross1 g++-arm-linux-gnueabihf_4:8.2.0-2 gcc_4:8.2.0-2 gcc-8_8.2.0-17 gcc-8-arm-linux-gnueabihf_8.2.0-11cross1 gcc-8-arm-linux-gnueabihf-base_8.2.0-11cross1 gcc-8-base_8.2.0-17 gcc-8-cross-base_8.2.0-11cross1 gcc-arm-linux-gnueabihf_4:8.2.0-2 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.12-1 grep_3.3-1 groff-base_1.22.4-2 gzip_1.9-3 hostname_3.21 init-system-helpers_1.56+nmu1 intltool-debian_0.35.0+20060710.5 libacl1_2.2.52-3+b1 libapt-pkg5.0_1.8.0~rc2 libarchive-zip-perl_1.64-1 libasan5_8.2.0-17 libasan5-armhf-cross_8.2.0-11cross1 libatomic1_8.2.0-17 libatomic1-armhf-cross_8.2.0-11cross1 libattr1_1:2.4.47-2+b2 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2 libbinutils_2.31.1-12 libblkid1_2.33.1-0.1 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libc-bin_2.28-6 libc-dev-bin_2.28-6 libc6_2.28-6 libc6-armhf-cross_2.28-4cross1 libc6-dev_2.28-6 libc6-dev-armhf-cross_2.28-4cross1 libcap-ng0_0.7.9-2 libcc1-0_8.2.0-17 libcom-err2_1.44.5-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.12-3 libdb5.3_5.3.28+dfsg1-0.3 libdebconfclient0_0.246 libdebian-dpkgcross-perl_2.6.15-2 libdpkg-perl_1.19.4 libelf1_0.175-2 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.1.0-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.2.0-17 libgcc-8-dev-armhf-cross_8.2.0-11cross1 libgcc1_1:8.2.0-17 libgcc1-armhf-cross_1:8.2.0-11cross1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-2 libgdbm6_1.18.1-2 libglib2.0-0_2.58.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.6-2 libgomp1_8.2.0-17 libgomp1-armhf-cross_8.2.0-11cross1 libgpg-error0_1.35-1 libhogweed4_3.4.1-1 libicu63_63.1-6 libidn2-0_2.0.5-1 libio-string-perl_1.08-3 libisl19_0.20-2 libitm1_8.2.0-17 liblocale-gettext-perl_1.07-3+b4 liblsan0_8.2.0-17 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-2 libmagic1_1:5.35-2 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.2.0-17 libncurses6_6.1+20181013-1 libncursesw6_6.1+20181013-1 libnettle6_3.4.1-1 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-4 libpam-modules-bin_1.1.8-4 libpam-runtime_1.1.8-4 libpam0g_1.1.8-4 libpcre3_2:8.39-11 libperl5.28_5.28.1-4 libpipeline1_1.5.1-1 libquadmath0_8.2.0-17 libseccomp2_2.3.3-3 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libss2_1.44.5-1 libstdc++-8-dev_8.2.0-17 libstdc++-8-dev-armhf-cross_8.2.0-11cross1 libstdc++6_8.2.0-17 libstdc++6-armhf-cross_8.2.0-11cross1 libsystemd0_240-5 libtasn1-6_4.13-3 libtinfo6_6.1+20181013-1 libtool_2.4.6-9 libtsan0_8.2.0-17 libubsan1_8.2.0-17 libubsan1-armhf-cross_8.2.0-11cross1 libuchardet0_0.0.6-3 libudev1_240-5 libunistring2_0.9.10-1 libuuid1_2.33.1-0.1 libxml-libxml-perl_2.0133+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.00+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-perl_1.27-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.16-1 linux-libc-dev-armhf-cross_4.19.13-1cross1 login_1:4.5-1.1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-1 mawk_1.3.3-17+b3 mount_2.33.1-0.1 ncurses-base_6.1+20181013-1 ncurses-bin_6.1+20181013-1 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-4 perl-base_5.28.1-4 perl-modules-5.28_5.28.1-4 po-debconf_1.0.21 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-essential-dummy_0.invalid.0 sbuild-build-depends-prodigal-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-6 tar_1.30+dfsg-5 tzdata_2018i-1 ucf_3.0038+nmu1 util-linux_2.33.1-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Tue Apr 10 13:05:25 2018 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./prodigal_2.6.3-4.dsc dpkg-source: info: extracting prodigal in /<> dpkg-source: info: unpacking prodigal_2.6.3.orig.tar.gz dpkg-source: info: unpacking prodigal_2.6.3-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying no_hardcoded_O3.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-1e83c42b-a024-484a-9c9c-42813140d796 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package prodigal dpkg-buildpackage: info: source version 1:2.6.3-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean dh_auto_clean make -j1 distclean make[1]: Entering directory '/<>' rm -f bitmap.o dprog.o gene.o main.o metagenomic.o node.o sequence.o training.o rm -f prodigal make[1]: Leaving directory '/<>' debian/rules override_dh_clean make[1]: Entering directory '/<>' dh_clean rm -f prodigal.1 make[1]: Leaving directory '/<>' debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a dh_auto_build -a make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabihf-pkg-config CXX=arm-linux-gnueabihf-g\+\+ CC=arm-linux-gnueabihf-gcc make[1]: Entering directory '/<>' arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O1 -pedantic -Wall -c -o bitmap.o bitmap.c arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O1 -pedantic -Wall -c -o dprog.o dprog.c arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O1 -pedantic -Wall -c -o gene.o gene.c gene.c: In function 'record_gene_data': gene.c:286:25: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] sprintf(genes[i].gene_data, "%srbs_motif=%s;rbs_spacer=%s", ~~~~~~~~^~~~~~~~~~ genes[i].gene_data, sd_string[nod[ndx].rbs[0]], ~~~~~~~~~~~~~~~~~~ gene.c:290:25: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] sprintf(genes[i].gene_data, "%srbs_motif=%s;rbs_spacer=%s", ~~~~~~~~^~~~~~~~~~ genes[i].gene_data, sd_string[nod[ndx].rbs[1]], ~~~~~~~~~~~~~~~~~~ gene.c:298:25: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] sprintf(genes[i].gene_data, "%srbs_motif=%s;rbs_spacer=%s", ~~~~~~~~^~~~~~~~~~ genes[i].gene_data, sd_string[nod[ndx].rbs[0]], ~~~~~~~~~~~~~~~~~~ gene.c:303:25: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] sprintf(genes[i].gene_data, "%srbs_motif=%s;rbs_spacer=%s", ~~~~~~~~^~~~~~~~~~ genes[i].gene_data, sd_string[nod[ndx].rbs[1]], ~~~~~~~~~~~~~~~~~~ gene.c:307:25: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] sprintf(genes[i].gene_data, "%srbs_motif=None;rbs_spacer=None", ~~~~~~~~^~~~~~~~~~ genes[i].gene_data); ~~~~~~~~~~~~~~~~~~ gene.c:309:28: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] else sprintf(genes[i].gene_data, "%srbs_motif=%s;rbs_spacer=%dbp", ~~~~~~~~^~~~~~~~~~ genes[i].gene_data, qt, nod[ndx].mot.spacer); ~~~~~~~~~~~~~~~~~~ gene.c:312:21: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] sprintf(genes[i].gene_data, "%s;gc_cont=%.3f", genes[i].gene_data, ~~~~~~~~^~~~~~~~~~ ~~~~~~~~~~~~~~~~~~ gene.c:322:21: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] sprintf(genes[i].score_data, "%stscore=%.2f;", genes[i].score_data, ~~~~~~~~^~~~~~~~~~~ ~~~~~~~~~~~~~~~~~~~ gene.c: In function 'print_genes': gene.c:343:13: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] sprintf(run_data, "%smodel=\"Ab initio\";", run_data); ^~~~~~~~ ~~~~~~~~ gene.c:347:13: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] sprintf(run_data, "%smodel=\"%s\";", run_data, mdesc); ^~~~~~~~ ~~~~~~~~ gene.c:349:11: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] sprintf(run_data, "%sgc_cont=%.2f;transl_table=%d;uses_sd=%d", run_data, ^~~~~~~~ ~~~~~~~~ gene.c:347:26: warning: 'model="' directive writing 7 bytes into a region of size between 1 and 10000 [-Wformat-overflow=] sprintf(run_data, "%smodel=\"%s\";", run_data, mdesc); ^~~~~~~~ gene.c:347:5: note: 'sprintf' output 10 or more bytes (assuming 10009) into a destination of size 10000 sprintf(run_data, "%smodel=\"%s\";", run_data, mdesc); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gene.c:343:26: warning: 'model="Ab initio";' directive writing 18 bytes into a region of size between 1 and 10000 [-Wformat-overflow=] sprintf(run_data, "%smodel=\"Ab initio\";", run_data); ^~~~~~~~~~~~~~~~~~~~ gene.c:343:5: note: 'sprintf' output between 19 and 10018 bytes into a destination of size 10000 sprintf(run_data, "%smodel=\"Ab initio\";", run_data); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gene.c:349:24: warning: 'gc_cont=' directive writing 8 bytes into a region of size between 1 and 10000 [-Wformat-overflow=] sprintf(run_data, "%sgc_cont=%.2f;transl_table=%d;uses_sd=%d", run_data, ^~~~~~~~ gene.c:349:21: note: assuming directive output of 4 bytes sprintf(run_data, "%sgc_cont=%.2f;transl_table=%d;uses_sd=%d", run_data, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gene.c:349:3: note: 'sprintf' output between 37 and 10366 bytes into a destination of size 10000 sprintf(run_data, "%sgc_cont=%.2f;transl_table=%d;uses_sd=%d", run_data, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tinf->gc*100.0, tinf->trans_table, tinf->uses_sd); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O1 -pedantic -Wall -c -o main.o main.c arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O1 -pedantic -Wall -c -o metagenomic.o metagenomic.c arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O1 -pedantic -Wall -c -o node.o node.c node.c: In function 'write_start_file': node.c:1422:13: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] sprintf(run_data, "%smodel=\"Ab initio\";", run_data); ^~~~~~~~ ~~~~~~~~ node.c:1426:13: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] sprintf(run_data, "%smodel=\"%s\";", run_data, mdesc); ^~~~~~~~ ~~~~~~~~ node.c:1428:11: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] sprintf(run_data, "%sgc_cont=%.2f;transl_table=%d;uses_sd=%d", run_data, ^~~~~~~~ ~~~~~~~~ node.c:1426:26: warning: 'model="' directive writing 7 bytes into a region of size between 1 and 10000 [-Wformat-overflow=] sprintf(run_data, "%smodel=\"%s\";", run_data, mdesc); ^~~~~~~~ node.c:1426:5: note: 'sprintf' output 10 or more bytes (assuming 10009) into a destination of size 10000 sprintf(run_data, "%smodel=\"%s\";", run_data, mdesc); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ node.c:1422:26: warning: 'model="Ab initio";' directive writing 18 bytes into a region of size between 1 and 10000 [-Wformat-overflow=] sprintf(run_data, "%smodel=\"Ab initio\";", run_data); ^~~~~~~~~~~~~~~~~~~~ node.c:1422:5: note: 'sprintf' output between 19 and 10018 bytes into a destination of size 10000 sprintf(run_data, "%smodel=\"Ab initio\";", run_data); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ node.c:1428:24: warning: 'gc_cont=' directive writing 8 bytes into a region of size between 1 and 10000 [-Wformat-overflow=] sprintf(run_data, "%sgc_cont=%.2f;transl_table=%d;uses_sd=%d", run_data, ^~~~~~~~ node.c:1428:21: note: assuming directive output of 4 bytes sprintf(run_data, "%sgc_cont=%.2f;transl_table=%d;uses_sd=%d", run_data, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ node.c:1428:3: note: 'sprintf' output between 37 and 10366 bytes into a destination of size 10000 sprintf(run_data, "%sgc_cont=%.2f;transl_table=%d;uses_sd=%d", run_data, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tinf->gc*100.0, tinf->trans_table, tinf->uses_sd); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O1 -pedantic -Wall -c -o sequence.o sequence.c arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O1 -pedantic -Wall -c -o training.o training.c arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O1 -pedantic -Wall -o prodigal bitmap.o dprog.o gene.o main.o metagenomic.o node.o sequence.o training.o -lm -Wl,-z,relro -Wl,-z,now make[1]: Leaving directory '/<>' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' echo "Do not try to install to /usr/local" Do not try to install to /usr/local make[1]: Leaving directory '/<>' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'prodigal' in '../prodigal_2.6.3-4_armhf.deb'. dpkg-deb: building package 'prodigal-dbgsym' in '../prodigal-dbgsym_2.6.3-4_armhf.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../prodigal_2.6.3-4_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-02-08T19:24:08Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/resolver-e1dDCi/apt_archive/sbuild-build-depends-lintian-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-lintian-dummy sbuild-build-depends-prodigal-dummy dpkg-scanpackages: info: Wrote 4 entries to output Packages file. Ign:1 copy:/<>/resolver-e1dDCi/apt_archive ./ InRelease Get:2 copy:/<>/resolver-e1dDCi/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-e1dDCi/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-e1dDCi/apt_archive ./ Sources [755 B] Get:5 copy:/<>/resolver-e1dDCi/apt_archive ./ Packages [828 B] Fetched 2546 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libdata-dump-perl ca-certificates libhtml-template-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:armhf t1utils 0 upgraded, 45 newly installed, 0 to remove and 0 not upgraded. Need to get 7661 kB of archives. After this operation, 20.5 MB of additional disk space will be used. Get:1 copy:/<>/resolver-e1dDCi/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 5.5 [19.3 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 7.0-5 [70.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.62-1 [33.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.2-1 [49.4 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.12-1 [509 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.26.0+fossilbc891ac6b-2 [635 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.12-1 [862 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.34+b1 [71.2 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.40-1 [222 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.21-1+b3 [13.6 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.41-1+b1 [14.6 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1a-1 [1527 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 3 [6782 B] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.85-2+b1 [308 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.060-3 [207 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.18-1 [88.5 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.19-1 [372 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.39-1 [74.5 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.72-1 [262 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b5 [33.7 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-1 [101 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b4 [64.2 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libparse-debianchangelog-perl all 1.2.0-13 [59.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.76+repack-1 [33.1 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2 [90.4 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.6.0 [1193 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7661 kB in 0s (37.1 MB/s) Selecting previously unselected package netbase. (Reading database ... 17553 files and directories currently installed.) Preparing to unpack .../00-netbase_5.5_all.deb ... Unpacking netbase (5.5) ... Selecting previously unselected package readline-common. Preparing to unpack .../01-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.62-1_amd64.deb ... Unpacking diffstat (1.62-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.2-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.2-1) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../04-libreadline7_7.0-5_amd64.deb ... Unpacking libreadline7:amd64 (7.0-5) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.12-1_amd64.deb ... Unpacking gpgconf (2.2.12-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../06-libsqlite3-0_3.26.0+fossilbc891ac6b-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.26.0+fossilbc891ac6b-2) ... Selecting previously unselected package gpg. Preparing to unpack .../07-gpg_2.2.12-1_amd64.deb ... Unpacking gpg (2.2.12-1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../08-libapt-pkg-perl_0.1.34+b1_amd64.deb ... Unpacking libapt-pkg-perl (0.1.34+b1) ... Selecting previously unselected package libhtml-tagset-perl. Preparing to unpack .../09-libhtml-tagset-perl_3.20-3_all.deb ... Unpacking libhtml-tagset-perl (3.20-3) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../10-liburi-perl_1.76-1_all.deb ... Unpacking liburi-perl (1.76-1) ... Selecting previously unselected package libhtml-parser-perl. Preparing to unpack .../11-libhtml-parser-perl_3.72-3+b3_amd64.deb ... Unpacking libhtml-parser-perl (3.72-3+b3) ... Selecting previously unselected package libcgi-pm-perl. Preparing to unpack .../12-libcgi-pm-perl_4.40-1_all.deb ... Unpacking libcgi-pm-perl (4.40-1) ... Selecting previously unselected package libsub-name-perl. Preparing to unpack .../13-libsub-name-perl_0.21-1+b3_amd64.deb ... Unpacking libsub-name-perl (0.21-1+b3) ... Selecting previously unselected package libclass-accessor-perl. Preparing to unpack .../14-libclass-accessor-perl_0.51-1_all.deb ... Unpacking libclass-accessor-perl (0.51-1) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../15-libclone-perl_0.41-1+b1_amd64.deb ... Unpacking libclone-perl (0.41-1+b1) ... Selecting previously unselected package libdigest-hmac-perl. Preparing to unpack .../16-libdigest-hmac-perl_1.03+dfsg-2_all.deb ... Unpacking libdigest-hmac-perl (1.03+dfsg-2) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../17-libtimedate-perl_2.3000-2_all.deb ... Unpacking libtimedate-perl (2.3000-2) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../18-libssl1.1_1.1.1a-1_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1a-1) ... Selecting previously unselected package perl-openssl-defaults:amd64. Preparing to unpack .../19-perl-openssl-defaults_3_amd64.deb ... Unpacking perl-openssl-defaults:amd64 (3) ... Selecting previously unselected package libnet-ssleay-perl. Preparing to unpack .../20-libnet-ssleay-perl_1.85-2+b1_amd64.deb ... Unpacking libnet-ssleay-perl (1.85-2+b1) ... Selecting previously unselected package libio-socket-ssl-perl. Preparing to unpack .../21-libio-socket-ssl-perl_2.060-3_all.deb ... Unpacking libio-socket-ssl-perl (2.060-3) ... Selecting previously unselected package libnet-smtp-ssl-perl. Preparing to unpack .../22-libnet-smtp-ssl-perl_1.04-1_all.deb ... Unpacking libnet-smtp-ssl-perl (1.04-1) ... Selecting previously unselected package libmailtools-perl. Preparing to unpack .../23-libmailtools-perl_2.18-1_all.deb ... Unpacking libmailtools-perl (2.18-1) ... Selecting previously unselected package libnet-ip-perl. Preparing to unpack .../24-libnet-ip-perl_1.26-2_all.deb ... Unpacking libnet-ip-perl (1.26-2) ... Selecting previously unselected package libnet-dns-perl. Preparing to unpack .../25-libnet-dns-perl_1.19-1_all.deb ... Unpacking libnet-dns-perl (1.19-1) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../26-libnet-domain-tld-perl_1.75-1_all.deb ... Unpacking libnet-domain-tld-perl (1.75-1) ... Selecting previously unselected package libemail-valid-perl. Preparing to unpack .../27-libemail-valid-perl_1.202-1_all.deb ... Unpacking libemail-valid-perl (1.202-1) ... Selecting previously unselected package libexporter-tiny-perl. Preparing to unpack .../28-libexporter-tiny-perl_1.002001-1_all.deb ... Unpacking libexporter-tiny-perl (1.002001-1) ... Selecting previously unselected package libipc-system-simple-perl. Preparing to unpack .../29-libipc-system-simple-perl_1.25-4_all.deb ... Unpacking libipc-system-simple-perl (1.25-4) ... Selecting previously unselected package libfile-basedir-perl. Preparing to unpack .../30-libfile-basedir-perl_0.08-1_all.deb ... Unpacking libfile-basedir-perl (0.08-1) ... Selecting previously unselected package libfuture-perl. Preparing to unpack .../31-libfuture-perl_0.39-1_all.deb ... Unpacking libfuture-perl (0.39-1) ... Selecting previously unselected package libstruct-dumb-perl. Preparing to unpack .../32-libstruct-dumb-perl_0.09-1_all.deb ... Unpacking libstruct-dumb-perl (0.09-1) ... Selecting previously unselected package libio-async-perl. Preparing to unpack .../33-libio-async-perl_0.72-1_all.deb ... Unpacking libio-async-perl (0.72-1) ... Selecting previously unselected package libio-pty-perl. Preparing to unpack .../34-libio-pty-perl_1%3a1.08-1.1+b5_amd64.deb ... Unpacking libio-pty-perl (1:1.08-1.1+b5) ... Selecting previously unselected package libipc-run-perl. Preparing to unpack .../35-libipc-run-perl_20180523.0-1_all.deb ... Unpacking libipc-run-perl (20180523.0-1) ... Selecting previously unselected package liblist-moreutils-perl. Preparing to unpack .../36-liblist-moreutils-perl_0.416-1+b4_amd64.deb ... Unpacking liblist-moreutils-perl (0.416-1+b4) ... Selecting previously unselected package libparse-debianchangelog-perl. Preparing to unpack .../37-libparse-debianchangelog-perl_1.2.0-13_all.deb ... Unpacking libparse-debianchangelog-perl (1.2.0-13) ... Selecting previously unselected package libtext-levenshtein-perl. Preparing to unpack .../38-libtext-levenshtein-perl_0.13-1_all.deb ... Unpacking libtext-levenshtein-perl (0.13-1) ... Selecting previously unselected package libyaml-0-2:amd64. Preparing to unpack .../39-libyaml-0-2_0.2.1-1_amd64.deb ... Unpacking libyaml-0-2:amd64 (0.2.1-1) ... Selecting previously unselected package libyaml-libyaml-perl. Preparing to unpack .../40-libyaml-libyaml-perl_0.76+repack-1_amd64.deb ... Unpacking libyaml-libyaml-perl (0.76+repack-1) ... Selecting previously unselected package patchutils. Preparing to unpack .../41-patchutils_0.3.4-2_amd64.deb ... Unpacking patchutils (0.3.4-2) ... Selecting previously unselected package t1utils. Preparing to unpack .../42-t1utils_1.41-3_amd64.deb ... Unpacking t1utils (1.41-3) ... Selecting previously unselected package lintian. Preparing to unpack .../43-lintian_2.6.0_all.deb ... Unpacking lintian (2.6.0) ... Selecting previously unselected package sbuild-build-depends-lintian-dummy:armhf. Preparing to unpack .../44-sbuild-build-depends-lintian-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Setting up libhtml-tagset-perl (3.20-3) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up readline-common (7.0-5) ... Setting up libapt-pkg-perl (0.1.34+b1) ... Setting up libio-pty-perl (1:1.08-1.1+b5) ... Setting up libtext-levenshtein-perl (0.13-1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libnet-ip-perl (1.26-2) ... Setting up libreadline7:amd64 (7.0-5) ... Setting up libipc-system-simple-perl (1.25-4) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up libfuture-perl (0.39-1) ... Setting up libexporter-tiny-perl (1.002001-1) ... Setting up libstruct-dumb-perl (0.09-1) ... Setting up libyaml-0-2:amd64 (0.2.1-1) ... Setting up patchutils (0.3.4-2) ... Setting up liburi-perl (1.76-1) ... Setting up t1utils (1.41-3) ... Setting up libssl1.1:amd64 (1.1.1a-1) ... Setting up libhtml-parser-perl (3.72-3+b3) ... Setting up libipc-run-perl (20180523.0-1) ... Setting up libcgi-pm-perl (4.40-1) ... Setting up libsqlite3-0:amd64 (3.26.0+fossilbc891ac6b-2) ... Setting up libdigest-hmac-perl (1.03+dfsg-2) ... Setting up libio-async-perl (0.72-1) ... Setting up libclone-perl (0.41-1+b1) ... Setting up libsub-name-perl (0.21-1+b3) ... Setting up libyaml-libyaml-perl (0.76+repack-1) ... Setting up libassuan0:amd64 (2.5.2-1) ... Setting up diffstat (1.62-1) ... Setting up libclass-accessor-perl (0.51-1) ... Setting up netbase (5.5) ... Setting up liblist-moreutils-perl (0.416-1+b4) ... Setting up perl-openssl-defaults:amd64 (3) ... Setting up gpgconf (2.2.12-1) ... Setting up libnet-dns-perl (1.19-1) ... Setting up libparse-debianchangelog-perl (1.2.0-13) ... Setting up gpg (2.2.12-1) ... Setting up libnet-ssleay-perl (1.85-2+b1) ... Setting up libio-socket-ssl-perl (2.060-3) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmailtools-perl (2.18-1) ... Setting up libemail-valid-perl (1.202-1) ... Setting up lintian (2.6.0) ... Setting up sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Processing triggers for man-db (2.8.5-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.28-6) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ prodigal_2.6.3-4_armhf.changes: ------------------------------- Format: 1.8 Date: Tue, 10 Apr 2018 14:58:10 +0200 Source: prodigal Binary: prodigal prodigal-dbgsym Built-For-Profiles: cross nocheck Architecture: armhf Version: 1:2.6.3-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: prodigal - Microbial (bacterial and archaeal) gene finding program Closes: 894473 Changes: prodigal (1:2.6.3-4) unstable; urgency=medium . * Finalise the fix proposed by Adrian Bunk Closes: #894473 Checksums-Sha1: 5f19dde01bc4048bb5cd1e67e5f955c55ed70e81 68892 prodigal-dbgsym_2.6.3-4_armhf.deb d9cc3c0d333adadacce1eb3198ce5dcc3945dea4 4438 prodigal_2.6.3-4_armhf.buildinfo bb09b0079c5b957125b42b77b9e3da67683393af 770196 prodigal_2.6.3-4_armhf.deb Checksums-Sha256: 05e2328ea54f8cc9c64a0b3ab6aeea5b9f0e71fc7f535c747a7dcc00e79df8b1 68892 prodigal-dbgsym_2.6.3-4_armhf.deb 3e9a89f648e8c3ae0b5c344b1ca217d1eb7e577dcf4839f95662fc739ac6a10e 4438 prodigal_2.6.3-4_armhf.buildinfo 29305c8f8dfaed8989920188af9ca5857d8022fba0e480c5b61eed38e95936a2 770196 prodigal_2.6.3-4_armhf.deb Files: 2fc3e3ffaf7e5dab72f42d7a0aae6ee9 68892 debug optional prodigal-dbgsym_2.6.3-4_armhf.deb 7f60e5e0a2506da92f5a78121155a730 4438 science optional prodigal_2.6.3-4_armhf.buildinfo 70dc36cf080fbc2968cfdf8b5ed58b9e 770196 science optional prodigal_2.6.3-4_armhf.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: prodigal Binary: prodigal Architecture: armhf Version: 1:2.6.3-4 Checksums-Md5: 2fc3e3ffaf7e5dab72f42d7a0aae6ee9 68892 prodigal-dbgsym_2.6.3-4_armhf.deb 70dc36cf080fbc2968cfdf8b5ed58b9e 770196 prodigal_2.6.3-4_armhf.deb Checksums-Sha1: 5f19dde01bc4048bb5cd1e67e5f955c55ed70e81 68892 prodigal-dbgsym_2.6.3-4_armhf.deb bb09b0079c5b957125b42b77b9e3da67683393af 770196 prodigal_2.6.3-4_armhf.deb Checksums-Sha256: 05e2328ea54f8cc9c64a0b3ab6aeea5b9f0e71fc7f535c747a7dcc00e79df8b1 68892 prodigal-dbgsym_2.6.3-4_armhf.deb 29305c8f8dfaed8989920188af9ca5857d8022fba0e480c5b61eed38e95936a2 770196 prodigal_2.6.3-4_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Fri, 08 Feb 2019 19:24:08 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 10.1), base-passwd (= 3.5.45), bash (= 5.0-2), binutils (= 2.31.1-12), binutils-common (= 2.31.1-12), binutils-x86-64-linux-gnu (= 2.31.1-12), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.33.1-0.1), build-essential (= 12.5), bzip2 (= 1.0.6-9), coreutils (= 8.30-1), cpp (= 4:8.2.0-2), cpp-8 (= 8.2.0-17), dash (= 0.5.10.2-5), debconf (= 1.5.70), debhelper (= 12), debianutils (= 4.8.6.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.1.0-1), diffutils (= 1:3.6-1), dpkg (= 1.19.4), dpkg-dev (= 1.19.4), dwz (= 0.12-3), fdisk (= 2.33.1-0.1), file (= 1:5.35-2), findutils (= 4.6.0+git+20190105-2), g++ (= 4:8.2.0-2), g++-8 (= 8.2.0-17), gcc (= 4:8.2.0-2), gcc-8 (= 8.2.0-17), gcc-8-base (= 8.2.0-17), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), grep (= 3.3-1), groff-base (= 1.22.4-2), gzip (= 1.9-3), hostname (= 3.21), init-system-helpers (= 1.56+nmu1), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.52-3+b1), libarchive-zip-perl (= 1.64-1), libasan5 (= 8.2.0-17), libatomic1 (= 8.2.0-17), libattr1 (= 1:2.4.47-2+b2), libaudit-common (= 1:2.8.4-2), libaudit1 (= 1:2.8.4-2), libbinutils (= 2.31.1-12), libblkid1 (= 2.33.1-0.1), libbsd0 (= 0.9.1-1), libbz2-1.0 (= 1.0.6-9), libc-bin (= 2.28-6), libc-dev-bin (= 2.28-6), libc6 (= 2.28-6), libc6-dev (= 2.28-6), libcap-ng0 (= 0.7.9-2), libcc1-0 (= 8.2.0-17), libcroco3 (= 0.6.12-3), libdb5.3 (= 5.3.28+dfsg1-0.3), libdebconfclient0 (= 0.246), libdpkg-perl (= 1.19.4), libelf1 (= 0.175-2), libfdisk1 (= 2.33.1-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.1.0-1), libgcc-8-dev (= 8.2.0-17), libgcc1 (= 1:8.2.0-17), libgcrypt20 (= 1.8.4-5), libgdbm-compat4 (= 1.18.1-2), libgdbm6 (= 1.18.1-2), libglib2.0-0 (= 2.58.3-1), libgmp10 (= 2:6.1.2+dfsg-4), libgomp1 (= 8.2.0-17), libgpg-error0 (= 1.35-1), libicu63 (= 63.1-6), libisl19 (= 0.20-2), libitm1 (= 8.2.0-17), liblsan0 (= 8.2.0-17), liblz4-1 (= 1.8.3-1), liblzma5 (= 5.2.4-1), libmagic-mgc (= 1:5.35-2), libmagic1 (= 1:5.35-2), libmount1 (= 2.33.1-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.2.0-17), libncurses6 (= 6.1+20181013-1), libncursesw6 (= 6.1+20181013-1), libpam-modules (= 1.1.8-4), libpam-modules-bin (= 1.1.8-4), libpam-runtime (= 1.1.8-4), libpam0g (= 1.1.8-4), libpcre3 (= 2:8.39-11), libperl5.28 (= 5.28.1-4), libpipeline1 (= 1.5.1-1), libquadmath0 (= 8.2.0-17), libseccomp2 (= 2.3.3-3), libselinux1 (= 2.8-1+b1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.33.1-0.1), libstdc++-8-dev (= 8.2.0-17), libstdc++6 (= 8.2.0-17), libsystemd0 (= 240-5), libtinfo6 (= 6.1+20181013-1), libtool (= 2.4.6-9), libtsan0 (= 8.2.0-17), libubsan1 (= 8.2.0-17), libuchardet0 (= 0.0.6-3), libudev1 (= 240-5), libunistring2 (= 0.9.10-1), libuuid1 (= 2.33.1-0.1), libxml2 (= 2.9.4+dfsg1-7+b3), linux-libc-dev (= 4.19.16-1), login (= 1:4.5-1.1), m4 (= 1.4.18-2), make (= 4.2.1-1.2), man-db (= 2.8.5-1), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20181013-1), ncurses-bin (= 6.1+20181013-1), patch (= 2.7.6-3), perl (= 5.28.1-4), perl-base (= 5.28.1-4), perl-modules-5.28 (= 5.28.1-4), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.93-6), tar (= 1.30+dfsg-5), util-linux (= 2.33.1-0.1), xz-utils (= 5.2.4-1), zlib1g (= 1:1.2.11.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="POSIX" SOURCE_DATE_EPOCH="1523365090" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ prodigal-dbgsym_2.6.3-4_armhf.deb --------------------------------- new Debian package, version 2.0. size 68892 bytes: control archive=536 bytes. 378 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: prodigal-dbgsym Source: prodigal Version: 1:2.6.3-4 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 113 Depends: prodigal (= 1:2.6.3-4) Section: debug Priority: optional Description: debug symbols for prodigal Build-Ids: 6ffed7ad85c8fee1b61b84fd851fd52661230df6 drwxr-xr-x root/root 0 2018-04-10 12:58 ./ drwxr-xr-x root/root 0 2018-04-10 12:58 ./usr/ drwxr-xr-x root/root 0 2018-04-10 12:58 ./usr/lib/ drwxr-xr-x root/root 0 2018-04-10 12:58 ./usr/lib/debug/ drwxr-xr-x root/root 0 2018-04-10 12:58 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2018-04-10 12:58 ./usr/lib/debug/.build-id/6f/ -rw-r--r-- root/root 105320 2018-04-10 12:58 ./usr/lib/debug/.build-id/6f/fed7ad85c8fee1b61b84fd851fd52661230df6.debug drwxr-xr-x root/root 0 2018-04-10 12:58 ./usr/share/ drwxr-xr-x root/root 0 2018-04-10 12:58 ./usr/share/doc/ lrwxrwxrwx root/root 0 2018-04-10 12:58 ./usr/share/doc/prodigal-dbgsym -> prodigal prodigal_2.6.3-4_armhf.deb -------------------------- new Debian package, version 2.0. size 770196 bytes: control archive=1532 bytes. 1814 bytes, 40 lines control 620 bytes, 9 lines md5sums Package: prodigal Version: 1:2.6.3-4 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 12588 Depends: libc6 (>= 2.7) Section: science Priority: optional Homepage: http://prodigal.ornl.gov/ Description: Microbial (bacterial and archaeal) gene finding program Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a microbial (bacterial and archaeal) gene finding program developed at Oak Ridge National Laboratory and the University of Tennessee. Key features of Prodigal include: . Speed: Prodigal is an extremely fast gene recognition tool (written in very vanilla C). It can analyze an entire microbial genome in 30 seconds or less. . Accuracy: Prodigal is a highly accurate gene finder. It correctly locates the 3' end of every gene in the experimentally verified Ecogene data set (except those containing introns). It possesses a very sophisticated ribosomal binding site scoring system that enables it to locate the translation initiation site with great accuracy (96% of the 5' ends in the Ecogene data set are located correctly). . Specificity: Prodigal's false positive rate compares favorably with other gene identification programs, and usually falls under 5%. . GC-Content Indifferent: Prodigal performs well even in high GC genomes, with over a 90% perfect match (5'+3') to the Pseudomonas aeruginosa curated annotations. . Metagenomic Version: Prodigal can run in metagenomic mode and analyze sequences even when the organism is unknown. . Ease of Use: Prodigal can be run in one step on a single genomic sequence or on a draft genome containing many sequences. It does not need to be supplied with any knowledge of the organism, as it learns all the properties it needs to on its own. drwxr-xr-x root/root 0 2018-04-10 12:58 ./ drwxr-xr-x root/root 0 2018-04-10 12:58 ./usr/ drwxr-xr-x root/root 0 2018-04-10 12:58 ./usr/bin/ -rwxr-xr-x root/root 12817828 2018-04-10 12:58 ./usr/bin/prodigal drwxr-xr-x root/root 0 2018-04-10 12:58 ./usr/share/ drwxr-xr-x root/root 0 2018-04-10 12:58 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-04-10 12:58 ./usr/share/doc/prodigal/ -rw-r--r-- root/root 2401 2016-02-12 00:28 ./usr/share/doc/prodigal/README.md -rw-r--r-- root/root 177 2018-04-10 12:58 ./usr/share/doc/prodigal/README.test -rw-r--r-- root/root 786 2018-04-10 12:58 ./usr/share/doc/prodigal/changelog.Debian.gz -rw-r--r-- root/root 3140 2016-02-12 00:28 ./usr/share/doc/prodigal/changelog.gz -rw-r--r-- root/root 1900 2018-04-10 12:58 ./usr/share/doc/prodigal/copyright -rw-r--r-- root/root 377 2018-04-10 12:58 ./usr/share/doc/prodigal/run-unit-test drwxr-xr-x root/root 0 2018-04-10 12:58 ./usr/share/doc/prodigal/test-data/ -rw-r--r-- root/root 47115 2018-04-10 12:58 ./usr/share/doc/prodigal/test-data/genome.fna.gz drwxr-xr-x root/root 0 2018-04-10 12:58 ./usr/share/man/ drwxr-xr-x root/root 0 2018-04-10 12:58 ./usr/share/man/man1/ -rw-r--r-- root/root 855 2018-04-10 12:58 ./usr/share/man/man1/prodigal.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 64776 Build-Time: 792 Distribution: unstable Foreign Architectures: armhf Host Architecture: armhf Install-Time: 21 Job: prodigal_1:2.6.3-4 Lintian: pass Machine Architecture: amd64 Package: prodigal Package-Time: 825 Source-Version: 1:2.6.3-4 Space: 64776 Status: successful Version: 1:2.6.3-4 -------------------------------------------------------------------------------- Finished at 2019-02-08T19:24:08Z Build needed 00:13:45, 64776k disk space