sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | proftmb 1.1.12-11 (armhf) Fri, 18 Jul 2025 05:16:35 +0000 | +==============================================================================+ Package: proftmb Version: 1.1.12-11 Source Version: 1.1.12-11 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-f76075d9-4377-4c5d-b0e1-9abaa6a275bc' with '<>' I: NOTICE: Log filtering will replace 'build/proftmb-kghBZF/resolver-11sMQI' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian unstable InRelease [213 kB] Get:2 http://localhost:3142/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian unstable/non-free Sources.diff/Index [63.3 kB] Get:4 http://localhost:3142/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:5 http://localhost:3142/debian unstable/main Sources T-2025-07-18-0204.41-F-2025-07-18-0204.41.pdiff [2410 B] Get:6 http://localhost:3142/debian unstable/non-free Sources T-2025-07-18-0204.41-F-2025-07-18-0204.41.pdiff [31 B] Get:5 http://localhost:3142/debian unstable/main Sources T-2025-07-18-0204.41-F-2025-07-18-0204.41.pdiff [2410 B] Get:7 http://localhost:3142/debian unstable/main amd64 Packages T-2025-07-18-0204.41-F-2025-07-18-0204.41.pdiff [2492 B] Get:6 http://localhost:3142/debian unstable/non-free Sources T-2025-07-18-0204.41-F-2025-07-18-0204.41.pdiff [31 B] Get:7 http://localhost:3142/debian unstable/main amd64 Packages T-2025-07-18-0204.41-F-2025-07-18-0204.41.pdiff [2492 B] Get:8 http://localhost:3142/debian unstable/main armhf Packages [9613 kB] Fetched 10.0 MB in 2s (4897 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'proftmb' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/proftmb.git Please use: git clone https://salsa.debian.org/med-team/proftmb.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 429 kB of source archives. Get:1 http://localhost:3142/debian unstable/main proftmb 1.1.12-11 (dsc) [2018 B] Get:2 http://localhost:3142/debian unstable/main proftmb 1.1.12-11 (tar) [420 kB] Get:3 http://localhost:3142/debian unstable/main proftmb 1.1.12-11 (diff) [6940 B] Fetched 429 kB in 0s (8510 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/proftmb-kghBZF/proftmb-1.1.12' with '<>' I: NOTICE: Log filtering will replace 'build/proftmb-kghBZF' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), help2man, libgsl-dev, opt, debhelper, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf Filtered Build-Depends: debhelper-compat (= 13), help2man, libgsl-dev, opt, debhelper, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf dpkg-deb: warning: root directory /<>/sbuild-build-depends-main-dummy has unusual owner or group 1000:119 dpkg-deb: hint: you might need to pass --root-owner-group, see for further details dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [752 B] Get:5 copy:/<>/apt_archive ./ Packages [795 B] Fetched 2156 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils cpp-14-arm-linux-gnueabihf cpp-arm-linux-gnueabihf crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-14-arm-linux-gnueabihf gcc-14-arm-linux-gnueabihf-base gcc-14-base:armhf gcc-14-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan8:armhf libasan8-armhf-cross libatomic1:armhf libatomic1-armhf-cross libc6:armhf libc6-armhf-cross libc6-dev:armhf libc6-dev-armhf-cross libcrypt-dev:armhf libcrypt1:armhf libdebhelper-perl libelf1t64 libfakeroot libfile-stripnondeterminism-perl libgcc-14-dev:armhf libgcc-14-dev-armhf-cross libgcc-s1:armhf libgcc-s1-armhf-cross libgomp1:armhf libgomp1-armhf-cross libgsl-dev:armhf libgsl28:armhf libgslcblas0:armhf liblocale-gettext-perl libmagic-mgc libmagic1t64 libpipeline1 libstdc++-14-dev:armhf libstdc++-14-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libunistring5 libxml2 linux-libc-dev-armhf-cross m4 man-db opt:armhf po-debconf sensible-utils Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-14-locales cpp-14-doc cpp-doc dh-make gcc-14-doc manpages-dev flex bison gdb-arm-linux-gnueabihf gcc-doc gettext-doc libasprintf-dev libgettextpo-dev gnulib-l10n groff glibc-doc:armhf libc-l10n:armhf locales:armhf libnss-nis:armhf libnss-nisplus:armhf manpages-dev:armhf gsl-ref-psdoc:armhf | gsl-doc-pdf:armhf | gsl-doc-info:armhf | gsl-ref-html:armhf libstdc++-14-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:armhf libarchive-cpio-perl libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils cpp-14-arm-linux-gnueabihf cpp-arm-linux-gnueabihf crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-14-arm-linux-gnueabihf gcc-14-arm-linux-gnueabihf-base gcc-14-base:armhf gcc-14-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan8:armhf libasan8-armhf-cross libatomic1:armhf libatomic1-armhf-cross libc6:armhf libc6-armhf-cross libc6-dev:armhf libc6-dev-armhf-cross libcrypt-dev:armhf libcrypt1:armhf libdebhelper-perl libelf1t64 libfakeroot libfile-stripnondeterminism-perl libgcc-14-dev:armhf libgcc-14-dev-armhf-cross libgcc-s1:armhf libgcc-s1-armhf-cross libgomp1:armhf libgomp1-armhf-cross libgsl-dev:armhf libgsl28:armhf libgslcblas0:armhf liblocale-gettext-perl libmagic-mgc libmagic1t64 libpipeline1 libstdc++-14-dev:armhf libstdc++-14-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libunistring5 libxml2 linux-libc-dev-armhf-cross m4 man-db opt:armhf po-debconf sbuild-build-depends-main-dummy:armhf sensible-utils 0 upgraded, 72 newly installed, 0 to remove and 0 not upgraded. Need to get 80.1 MB of archives. After this operation, 319 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [936 B] Get:2 http://localhost:3142/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-7+b1 [15.3 kB] Get:3 http://localhost:3142/debian unstable/main amd64 sensible-utils all 0.0.25 [25.0 kB] Get:4 http://localhost:3142/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get:5 http://localhost:3142/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get:6 http://localhost:3142/debian unstable/main amd64 file amd64 1:5.46-5 [43.6 kB] Get:7 http://localhost:3142/debian unstable/main amd64 gettext-base amd64 0.23.1-2 [243 kB] Get:8 http://localhost:3142/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get:9 http://localhost:3142/debian unstable/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get:10 http://localhost:3142/debian unstable/main amd64 bsdextrautils amd64 2.41-5 [94.6 kB] Get:11 http://localhost:3142/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:12 http://localhost:3142/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get:13 http://localhost:3142/debian unstable/main amd64 m4 amd64 1.4.19-8 [294 kB] Get:14 http://localhost:3142/debian unstable/main amd64 autoconf all 2.72-3.1 [494 kB] Get:15 http://localhost:3142/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get:16 http://localhost:3142/debian unstable/main amd64 automake all 1:1.17-4 [862 kB] Get:17 http://localhost:3142/debian unstable/main amd64 autopoint all 0.23.1-2 [770 kB] Get:18 http://localhost:3142/debian unstable/main amd64 binutils-arm-linux-gnueabihf amd64 2.44-3 [1501 kB] Get:19 http://localhost:3142/debian unstable/main amd64 gcc-14-arm-linux-gnueabihf-base amd64 14.2.0-19cross1 [49.6 kB] Get:20 http://localhost:3142/debian unstable/main amd64 cpp-14-arm-linux-gnueabihf amd64 14.2.0-19cross1 [10.4 MB] Get:21 http://localhost:3142/debian unstable/main amd64 cpp-arm-linux-gnueabihf amd64 4:14.2.0-1 [4856 B] Get:22 http://localhost:3142/debian unstable/main amd64 gcc-14-cross-base all 14.2.0-19cross1 [44.9 kB] Get:23 http://localhost:3142/debian unstable/main amd64 libc6-armhf-cross all 2.41-8cross1 [921 kB] Get:24 http://localhost:3142/debian unstable/main amd64 libgcc-s1-armhf-cross all 14.2.0-19cross1 [36.9 kB] Get:25 http://localhost:3142/debian unstable/main amd64 libgomp1-armhf-cross all 14.2.0-19cross1 [109 kB] Get:26 http://localhost:3142/debian unstable/main amd64 libatomic1-armhf-cross all 14.2.0-19cross1 [6936 B] Get:27 http://localhost:3142/debian unstable/main amd64 libasan8-armhf-cross all 14.2.0-19cross1 [2571 kB] Get:28 http://localhost:3142/debian unstable/main amd64 libstdc++6-armhf-cross all 14.2.0-19cross1 [559 kB] Get:29 http://localhost:3142/debian unstable/main amd64 libubsan1-armhf-cross all 14.2.0-19cross1 [1038 kB] Get:30 http://localhost:3142/debian unstable/main amd64 libgcc-14-dev-armhf-cross all 14.2.0-19cross1 [768 kB] Get:31 http://localhost:3142/debian unstable/main amd64 gcc-14-arm-linux-gnueabihf amd64 14.2.0-19cross1 [19.8 MB] Get:32 http://localhost:3142/debian unstable/main amd64 gcc-arm-linux-gnueabihf amd64 4:14.2.0-1 [1452 B] Get:33 http://localhost:3142/debian unstable/main amd64 linux-libc-dev-armhf-cross all 6.12.29-1cross1 [2382 kB] Get:34 http://localhost:3142/debian unstable/main amd64 libc6-dev-armhf-cross all 2.41-8cross1 [1324 kB] Get:35 http://localhost:3142/debian unstable/main amd64 libstdc++-14-dev-armhf-cross all 14.2.0-19cross1 [2347 kB] Get:36 http://localhost:3142/debian unstable/main amd64 g++-14-arm-linux-gnueabihf amd64 14.2.0-19cross1 [11.4 MB] Get:37 http://localhost:3142/debian unstable/main amd64 g++-arm-linux-gnueabihf amd64 4:14.2.0-1 [1208 B] Get:38 http://localhost:3142/debian unstable/main amd64 crossbuild-essential-armhf all 12.12 [3548 B] Get:39 http://localhost:3142/debian unstable/main amd64 libdebhelper-perl all 13.24.2 [90.9 kB] Get:40 http://localhost:3142/debian unstable/main amd64 libtool all 2.5.4-4 [539 kB] Get:41 http://localhost:3142/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:42 http://localhost:3142/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:43 http://localhost:3142/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get:44 http://localhost:3142/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get:45 http://localhost:3142/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get:46 http://localhost:3142/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:47 http://localhost:3142/debian unstable/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get:48 http://localhost:3142/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-1 [698 kB] Get:49 http://localhost:3142/debian unstable/main amd64 gettext amd64 0.23.1-2 [1680 kB] Get:50 http://localhost:3142/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:51 http://localhost:3142/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:52 http://localhost:3142/debian unstable/main amd64 debhelper all 13.24.2 [919 kB] Get:53 http://localhost:3142/debian unstable/main amd64 libfakeroot amd64 1.37.1.2-1 [29.7 kB] Get:54 http://localhost:3142/debian unstable/main amd64 fakeroot amd64 1.37.1.2-1 [76.0 kB] Get:55 http://localhost:3142/debian unstable/main armhf gcc-14-base armhf 14.2.0-19 [49.4 kB] Get:56 http://localhost:3142/debian unstable/main amd64 help2man amd64 1.49.3 [198 kB] Get:57 http://localhost:3142/debian unstable/main armhf libgcc-s1 armhf 14.2.0-19 [37.0 kB] Get:58 http://localhost:3142/debian unstable/main armhf libc6 armhf 2.41-10 [2255 kB] Get:59 http://localhost:3142/debian unstable/main armhf libasan8 armhf 14.2.0-19 [2583 kB] Get:60 http://localhost:3142/debian unstable/main armhf libatomic1 armhf 14.2.0-19 [7200 B] Get:61 http://localhost:3142/debian unstable/main armhf libcrypt1 armhf 1:4.4.38-1 [95.6 kB] Get:62 http://localhost:3142/debian unstable/main armhf libcrypt-dev armhf 1:4.4.38-1 [125 kB] Get:63 http://localhost:3142/debian unstable/main armhf libc6-dev armhf 2.41-10 [1327 kB] Get:64 http://localhost:3142/debian unstable/main armhf libgomp1 armhf 14.2.0-19 [111 kB] Get:65 http://localhost:3142/debian unstable/main armhf libstdc++6 armhf 14.2.0-19 [607 kB] Get:66 http://localhost:3142/debian unstable/main armhf libubsan1 armhf 14.2.0-19 [1040 kB] Get:67 http://localhost:3142/debian unstable/main armhf libgcc-14-dev armhf 14.2.0-19 [768 kB] Get:68 http://localhost:3142/debian unstable/main armhf libgslcblas0 armhf 2.8+dfsg-5 [85.5 kB] Get:69 http://localhost:3142/debian unstable/main armhf libgsl28 armhf 2.8+dfsg-5 [812 kB] Get:70 http://localhost:3142/debian unstable/main armhf libgsl-dev armhf 2.8+dfsg-5 [1030 kB] Get:71 http://localhost:3142/debian unstable/main armhf libstdc++-14-dev armhf 14.2.0-19 [2380 kB] Get:72 http://localhost:3142/debian unstable/main armhf opt armhf 3.19-3+b1 [65.8 kB] Preconfiguring packages ... Fetched 80.1 MB in 0s (208 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 12887 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-7+b1_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-7+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.25_all.deb ... Unpacking sensible-utils (0.0.25) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../03-libmagic1t64_1%3a5.46-5_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.46-5_amd64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. 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Setting up gcc-14-base:armhf (14.2.0-19) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gcc-14-arm-linux-gnueabihf-base:amd64 (14.2.0-19cross1) ... Setting up gettext-base (0.23.1-2) ... Setting up m4 (1.4.19-8) ... Setting up gcc-14-cross-base (14.2.0-19cross1) ... Setting up file (1:5.46-5) ... Setting up libatomic1-armhf-cross (14.2.0-19cross1) ... Setting up libfakeroot:amd64 (1.37.1.2-1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up fakeroot (1.37.1.2-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up autotools-dev (20240727.1) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up linux-libc-dev-armhf-cross (6.12.29-1cross1) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up opt:armhf (3.19-3+b1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.25) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up binutils-arm-linux-gnueabihf (2.44-3) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-1) ... Setting up liblocale-gettext-perl (1.07-7+b1) ... Setting up cpp-14-arm-linux-gnueabihf (14.2.0-19cross1) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libgomp1-armhf-cross (14.2.0-19cross1) ... Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-2) ... Setting up libtool (2.5.4-4) ... Setting up libgcc-s1-armhf-cross (14.2.0-19cross1) ... Setting up libc6-dev-armhf-cross (2.41-8cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up libstdc++6-armhf-cross (14.2.0-19cross1) ... Setting up libubsan1-armhf-cross (14.2.0-19cross1) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-9) ... Setting up cpp-arm-linux-gnueabihf (4:14.2.0-1) ... Setting up libasan8-armhf-cross (14.2.0-19cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libgcc-14-dev-armhf-cross (14.2.0-19cross1) ... Setting up libstdc++-14-dev-armhf-cross (14.2.0-19cross1) ... Setting up gcc-14-arm-linux-gnueabihf (14.2.0-19cross1) ... Setting up debhelper (13.24.2) ... Setting up gcc-arm-linux-gnueabihf (4:14.2.0-1) ... Setting up g++-14-arm-linux-gnueabihf (14.2.0-19cross1) ... Setting up g++-arm-linux-gnueabihf (4:14.2.0-1) ... Setting up crossbuild-essential-armhf (12.12) ... Setting up libgcc-s1:armhf (14.2.0-19) ... Setting up libc6:armhf (2.41-10) ... Setting up libasan8:armhf (14.2.0-19) ... Setting up libstdc++6:armhf (14.2.0-19) ... Setting up libgslcblas0:armhf (2.8+dfsg-5) ... Setting up libcrypt1:armhf (1:4.4.38-1) ... Setting up libgomp1:armhf (14.2.0-19) ... Setting up libatomic1:armhf (14.2.0-19) ... Setting up libubsan1:armhf (14.2.0-19) ... Setting up libcrypt-dev:armhf (1:4.4.38-1) ... Setting up libc6-dev:armhf (2.41-10) ... Setting up libgcc-14-dev:armhf (14.2.0-19) ... Setting up libgsl28:armhf (2.8+dfsg-5) ... Setting up libstdc++-14-dev:armhf (14.2.0-19) ... Setting up libgsl-dev:armhf (2.8+dfsg-5) ... Setting up sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.41-10) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-32-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.129-1 (2025-03-06) amd64 (x86_64) Toolchain package versions: binutils_2.44-3 dpkg-dev_1.22.21 g++-14_14.2.0-19 gcc-14_14.2.0-19 libc6-dev_2.41-10 libstdc++-14-dev_14.2.0-19 libstdc++-14-dev-armhf-cross_14.2.0-19cross1 libstdc++6_14.2.0-19 libstdc++6-armhf-cross_14.2.0-19cross1 linux-libc-dev_6.12.38-1 Package versions: apt_3.0.3 apt-utils_3.0.3 autoconf_2.72-3.1 automake_1:1.17-4 autopoint_0.23.1-2 autotools-dev_20240727.1 base-files_13.8 base-passwd_3.6.7 bash_5.2.37-2+b3 binutils_2.44-3 binutils-arm-linux-gnueabihf_2.44-3 binutils-common_2.44-3 binutils-x86-64-linux-gnu_2.44-3 bsdextrautils_2.41-5 bsdutils_1:2.41-5 build-essential_12.12 bzip2_1.0.8-6 coreutils_9.7-3 cpp_4:14.2.0-1 cpp-14_14.2.0-19 cpp-14-arm-linux-gnueabihf_14.2.0-19cross1 cpp-14-x86-64-linux-gnu_14.2.0-19 cpp-arm-linux-gnueabihf_4:14.2.0-1 cpp-x86-64-linux-gnu_4:14.2.0-1 crossbuild-essential-armhf_12.12 dash_0.5.12-12 debconf_1.5.91 debhelper_13.24.2 debian-archive-keyring_2025.1 debianutils_5.23.1 dh-autoreconf_20 dh-strip-nondeterminism_1.14.1-2 diffutils_1:3.10-4 dpkg_1.22.21 dpkg-dev_1.22.21 dwz_0.15-1+b1 fakeroot_1.37.1.2-1 file_1:5.46-5 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.2.0-19 g++-14-arm-linux-gnueabihf_14.2.0-19cross1 g++-14-x86-64-linux-gnu_14.2.0-19 g++-arm-linux-gnueabihf_4:14.2.0-1 g++-x86-64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-19 gcc-14-arm-linux-gnueabihf_14.2.0-19cross1 gcc-14-arm-linux-gnueabihf-base_14.2.0-19cross1 gcc-14-base_14.2.0-19 gcc-14-cross-base_14.2.0-19cross1 gcc-14-x86-64-linux-gnu_14.2.0-19 gcc-arm-linux-gnueabihf_4:14.2.0-1 gcc-x86-64-linux-gnu_4:14.2.0-1 gettext_0.23.1-2 gettext-base_0.23.1-2 grep_3.11-4 groff-base_1.23.0-9 gzip_1.13-1 help2man_1.49.3 hostname_3.25 init-system-helpers_1.68 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2+b1 libapt-pkg7.0_3.0.3 libarchive-zip-perl_1.68-1 libasan8_14.2.0-19 libasan8-armhf-cross_14.2.0-19cross1 libatomic1_14.2.0-19 libatomic1-armhf-cross_14.2.0-19cross1 libattr1_1:2.5.2-3 libaudit-common_1:4.0.5-1 libaudit1_1:4.0.5-1 libbinutils_2.44-3 libblkid1_2.41-5 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libc-bin_2.41-10 libc-dev-bin_2.41-10 libc6_2.41-10 libc6-armhf-cross_2.41-8cross1 libc6-dev_2.41-10 libc6-dev-armhf-cross_2.41-8cross1 libcap-ng0_0.8.5-4+b1 libcap2_1:2.75-9 libcc1-0_14.2.0-19 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.44-3 libctf0_2.44-3 libdb5.3t64_5.3.28+dfsg2-9 libdebconfclient0_0.279 libdebhelper-perl_13.24.2 libdpkg-perl_1.22.21 libelf1t64_0.192-4 libfakeroot_1.37.1.2-1 libfile-stripnondeterminism-perl_1.14.1-2 libgcc-14-dev_14.2.0-19 libgcc-14-dev-armhf-cross_14.2.0-19cross1 libgcc-s1_14.2.0-19 libgcc-s1-armhf-cross_14.2.0-19cross1 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgmp10_2:6.3.0+dfsg-3 libgomp1_14.2.0-19 libgomp1-armhf-cross_14.2.0-19cross1 libgprofng0_2.44-3 libgsl-dev_2.8+dfsg-5 libgsl28_2.8+dfsg-5 libgslcblas0_2.8+dfsg-5 libhogweed6t64_3.10.1-1 libhwasan0_14.2.0-19 libisl23_0.27-1 libitm1_14.2.0-19 libjansson4_2.14-2+b3 liblastlog2-2_2.41-5 liblocale-gettext-perl_1.07-7+b1 liblsan0_14.2.0-19 liblz4-1_1.10.0-4 liblzma5_5.8.1-1 libmagic-mgc_1:5.46-5 libmagic1t64_1:5.46-5 libmd0_1.1.0-2+b1 libmount1_2.41-5 libmpc3_1.3.1-1+b3 libmpfr6_4.2.2-1 libnettle8t64_3.10.1-1 libpam-modules_1.7.0-5 libpam-modules-bin_1.7.0-5 libpam-runtime_1.7.0-5 libpam0g_1.7.0-5 libpcre2-8-0_10.45-1 libperl5.40_5.40.1-5 libpipeline1_1.5.8-1 libquadmath0_14.2.0-19 libseccomp2_2.6.0-2 libselinux1_3.8.1-1 libsemanage-common_3.8.1-1 libsemanage2_3.8.1-1 libsepol2_3.8.1-1 libsframe1_2.44-3 libsmartcols1_2.41-5 libsqlite3-0_3.46.1-6 libssl3t64_3.5.1-1 libstdc++-14-dev_14.2.0-19 libstdc++-14-dev-armhf-cross_14.2.0-19cross1 libstdc++6_14.2.0-19 libstdc++6-armhf-cross_14.2.0-19cross1 libsystemd0_257.7-1 libtinfo6_6.5+20250216-2 libtool_2.5.4-4 libtsan2_14.2.0-19 libubsan1_14.2.0-19 libubsan1-armhf-cross_14.2.0-19cross1 libuchardet0_0.0.8-1+b2 libudev1_257.7-1 libunistring5_1.3-2 libuuid1_2.41-5 libxml2_2.12.7+dfsg+really2.9.14-1 libxxhash0_0.8.3-2 libzstd1_1.5.7+dfsg-1 linux-libc-dev_6.12.38-1 linux-libc-dev-armhf-cross_6.12.29-1cross1 login_1:4.16.0-2+really2.41-5 login.defs_1:4.17.4-2 m4_1.4.19-8 make_4.4.1-2 man-db_2.13.1-1 mawk_1.3.4.20250131-1 mount_2.41-5 ncurses-base_6.5+20250216-2 ncurses-bin_6.5+20250216-2 openssl-provider-legacy_3.5.1-1 opt_3.19-3+b1 passwd_1:4.17.4-2 patch_2.8-2 perl_5.40.1-5 perl-base_5.40.1-5 perl-modules-5.40_5.40.1-5 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.25 sqv_1.3.0-3 sysvinit-utils_3.14-4 tar_1.35+dfsg-3.1 tzdata_2025b-4 util-linux_2.41-5 xz-utils_5.8.1-1 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: proftmb Binary: proftmb Architecture: any Version: 1.1.12-11 Maintainer: Debian Med Packaging Team Uploaders: Laszlo Kajan , Andreas Tille Homepage: https://rostlab.org/ Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/proftmb Vcs-Git: https://salsa.debian.org/med-team/proftmb.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), help2man, libgsl-dev, opt, debhelper Package-List: proftmb deb science optional arch=any Checksums-Sha1: 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APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.ZQNQUjkwVf/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-f76075d9-4377-4c5d-b0e1-9abaa6a275bc SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa XDG_SESSION_CLASS=user dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aarmhf -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package proftmb dpkg-buildpackage: info: source version 1.1.12-11 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a configure.ac:9: installing './compile' configure.ac:50: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:50: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:50: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=arm-linux-gnueabihf checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for arm-linux-gnueabihf-strip... arm-linux-gnueabihf-strip checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking for arm-linux-gnueabihf-gcc... arm-linux-gnueabihf-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether arm-linux-gnueabihf-gcc accepts -g... yes checking for arm-linux-gnueabihf-gcc option to enable C11 features... none needed checking whether arm-linux-gnueabihf-gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of arm-linux-gnueabihf-gcc... none checking for arm-linux-gnueabihf-g++... arm-linux-gnueabihf-g++ checking whether the compiler supports GNU C++... yes checking whether arm-linux-gnueabihf-g++ accepts -g... yes checking for arm-linux-gnueabihf-g++ option to enable C++11 features... none needed checking dependency style of arm-linux-gnueabihf-g++... none checking for arm-linux-gnueabihf-ranlib... arm-linux-gnueabihf-ranlib checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking for main in -lopt... yes checking for main in -lm... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for gsl/gsl_errno.h... yes checking for opt.h... yes checking for an ANSI C-conforming const... yes checking for --enable-debug... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating examples/Makefile config.status: creating src/Makefile config.status: creating config.h config.status: executing depfiles commands dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in examples make[3]: Entering directory '/<>/examples' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/examples' Making all in src make[3]: Entering directory '/<>/src' arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o proftmb.o proftmb.cpp In file included from proftmb.cpp:18: HMMOutput.h:21:46: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 21 | void DisplayArch(ostream&,Par&,uint,char* =""); | ^ HMMOutput.h:24:44: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 24 | void PrintEmit(ostream&,Par&,uint,char* =""); | ^ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o Backward.o Backward.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o BaumWelch.o BaumWelch.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o Eval.o Eval.cpp Eval.cpp: In function ‘std::pair CalcAccCovFromZ(double&)’: Eval.cpp:573:52: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 573 | pair CalcAccCovFromZ(double& zscore){ | ^ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o ExpectA.o ExpectA.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o ExpectC.o ExpectC.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o Forward.o Forward.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o GradientDescent.o GradientDescent.cpp GradientDescent.cpp: In member function ‘std::pair Par::Update(std::vector&, std::set >&)’: GradientDescent.cpp:329:77: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 329 | pair Par::Update(vector& tsq, set& exclude){ | ^ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o HMMEval.o HMMEval.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o HMMOutput.o HMMOutput.cpp In file included from HMMOutput.cpp:1: HMMOutput.h:21:46: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 21 | void DisplayArch(ostream&,Par&,uint,char* =""); | ^ HMMOutput.h:24:44: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 24 | void PrintEmit(ostream&,Par&,uint,char* =""); | ^ HMMOutput.cpp: In function ‘void PrintRdb(std::ostream&, Seq&, bool, bool)’: HMMOutput.cpp:58:62: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 58 | pair ac = CalcAccCovFromZ(S.scl.Score); | ^ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o HTools.o HTools.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o Krogh1Best.o Krogh1Best.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o Load.o Load.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o Output.o Output.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o Par.o Par.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_algobase.h:64, from /usr/arm-linux-gnueabihf/include/c++/14/string:51, from structs.h:4, from Par.h:4, from Par.cpp:1: /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_pair.h: In instantiation of ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = float&; _T2 = float&; typename __strip_reference_wrapper::type>::__type = float; typename decay<_Tp>::type = float; typename __strip_reference_wrapper::type>::__type = float; typename decay<_Tp2>::type = float]’: Par.cpp:250:22: required from here 250 | zmap[z] = make_pair(acc,cov); | ~~~~~~~~~^~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_pair.h:1132:5: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 1132 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o Params.o Params.cpp In file included from Params.cpp:2: Serialize.h: In function ‘void StoreVector(std::ofstream&, std::vector&, T, M1, M2) [with T = std::pair; M1 = double; M2 = double]’: Serialize.h:28:6: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 28 | void StoreVector(ofstream& of, vector& D, T dummy1, M1 dummy2, M2 dummy3){ | ^~~~~~~~~~~ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o Posterior.o Posterior.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o Regularization.o Regularization.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o Seq.o Seq.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o Sov.o Sov.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o structs.o structs.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o Tally.o Tally.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o Tools.o Tools.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o TrainSeq.o TrainSeq.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o Viterbi.o Viterbi.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o Zscore.o Zscore.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_algobase.h:64, from /usr/arm-linux-gnueabihf/include/c++/14/vector:62, from Zscore.h:1, from Zscore.cpp:24: /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_pair.h: In instantiation of ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double&; _T2 = double&; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]’: Zscore.cpp:112:42: required from here 112 | stats.insert(make_pair(mean_x,make_pair(mean_y,sd))); | ~~~~~~~~~^~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_pair.h:1132:5: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 1132 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_pair.h: In instantiation of ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double&; _T2 = pair; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = pair; typename decay<_Tp2>::type = pair]’: Zscore.cpp:112:25: required from here 112 | stats.insert(make_pair(mean_x,make_pair(mean_y,sd))); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_pair.h:1132:5: note: parameter passing for argument of type ‘std::pair >’ when C++17 is enabled changed to match C++14 in GCC 10.1 1132 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ Zscore.cpp: In function ‘std::set > > ComputeStats(std::vector&, std::vector&, int)’: Zscore.cpp:112:56: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 112 | stats.insert(make_pair(mean_x,make_pair(mean_y,sd))); | ~~~~~~~~~^~~~~~~~~~~ Zscore.cpp:112:39: note: parameter passing for argument of type ‘std::pair >’ when C++17 is enabled changed to match C++14 in GCC 10.1 112 | stats.insert(make_pair(mean_x,make_pair(mean_y,sd))); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Zscore.cpp:143:56: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 143 | stats.insert(make_pair((double)cur_lo,make_pair(mean_y,sd))); | ~~~~~~~~~^~~~~~~~~~~ Zscore.cpp:143:31: note: parameter passing for argument of type ‘std::pair >’ when C++17 is enabled changed to match C++14 in GCC 10.1 143 | stats.insert(make_pair((double)cur_lo,make_pair(mean_y,sd))); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Zscore.cpp:149:60: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 149 | stats.insert(make_pair((double)max_length,make_pair(mean_y,sd))); | ~~~~~~~~~^~~~~~~~~~~ Zscore.cpp:149:31: note: parameter passing for argument of type ‘std::pair >’ when C++17 is enabled changed to match C++14 in GCC 10.1 149 | stats.insert(make_pair((double)max_length,make_pair(mean_y,sd))); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_pair.h: In function ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double&; _T2 = double&]’: /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_pair.h:1132:5: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 1132 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_pair.h: In function ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = pair]’: /usr/arm-linux-gnueabihf/include/c++/14/bits/stl_pair.h:1132:5: note: parameter passing for argument of type ‘std::pair >’ when C++17 is enabled changed to match C++14 in GCC 10.1 Zscore.cpp: In function ‘std::set > > ComputeStats(std::vector&, std::vector&, int)’: Zscore.cpp:112:56: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 112 | stats.insert(make_pair(mean_x,make_pair(mean_y,sd))); | ~~~~~~~~~^~~~~~~~~~~ Zscore.cpp:112:39: note: parameter passing for argument of type ‘std::pair >’ when C++17 is enabled changed to match C++14 in GCC 10.1 112 | stats.insert(make_pair(mean_x,make_pair(mean_y,sd))); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rm -f libhmm.a ar cr libhmm.a Backward.o BaumWelch.o Eval.o ExpectA.o ExpectC.o Forward.o GradientDescent.o HMMEval.o HMMOutput.o HTools.o Krogh1Best.o Load.o Output.o Par.o Params.o Posterior.o Regularization.o Seq.o Sov.o structs.o Tally.o Tools.o TrainSeq.o Viterbi.o Zscore.o arm-linux-gnueabihf-ranlib libhmm.a arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o proftmb proftmb.o libhmm.a -lgsl -lgslcblas -lm -lopt sed -e 's|__pkgdatadir__|/usr/share/proftmb|g;s|__datadir__|/usr/share|g;s|__PACKAGE__|proftmb|g;' < proftmb_example.txt.raw > proftmb_example.txt help2man -n 'per-residue prediction of bacterial transmembrane beta barrels' --output=proftmb.1 --no-info --include=proftmb_example.txt ./proftmb help2man: can't get `--help' info from ./proftmb Try `--no-discard-stderr' if option outputs to stderr make[3]: *** [Makefile:859: proftmb.1] Error 126 make[3]: Leaving directory '/<>/src' make[2]: *** [Makefile:421: all-recursive] Error 1 make[2]: Leaving directory '/<>' make[1]: *** [Makefile:341: all] Error 2 make[1]: Leaving directory '/<>' dh_auto_build: error: make -j1 returned exit code 2 make: *** [debian/rules:8: binary-arch] Error 25 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2025-07-18T05:17:40Z +------------------------------------------------------------------------------+ | Finished Timed Build Commands | +------------------------------------------------------------------------------+ rm -Rf /<>/ -------------------------------------------- I: Finished running 'rm -Rf /<>/'. Finished processing commands. -------------------------------------------------------------------------------- Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: n/a Build-Time: 47 Distribution: unstable Fail-Stage: build Foreign Architectures: armhf Host Architecture: armhf Install-Time: 9 Job: proftmb_1.1.12-11 Machine Architecture: amd64 Package: proftmb Package-Time: 65 Source-Version: 1.1.12-11 Space: n/a Status: attempted Version: 1.1.12-11 -------------------------------------------------------------------------------- Finished at 2025-07-18T05:17:40Z Build needed 00:01:05, no disk space