sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on gcc131.bak.milne.osuosl.org +==============================================================================+ | progressivemauve 1.2.0+4713+dfsg-4 (mips) Sun, 07 Apr 2019 10:52:35 +0000 | +==============================================================================+ Package: progressivemauve Version: 1.2.0+4713+dfsg-4 Source Version: 1.2.0+4713+dfsg-4 Distribution: unstable Machine Architecture: amd64 Host Architecture: mips Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-e97f428c-17e4-4f73-a5e1-60d7afcbb767' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [242 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-04-07-0812.41.pdiff [709 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-04-07-0812.41.pdiff [2525 B] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-04-07-0812.41.pdiff [709 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-04-07-0812.41.pdiff [2525 B] Get:6 http://debian.oregonstate.edu/debian unstable/main mips Packages [7975 kB] Fetched 8277 kB in 2s (4752 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'progressivemauve' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/progressivemauve.git Please use: git clone https://salsa.debian.org/med-team/progressivemauve.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 116 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main progressivemauve 1.2.0+4713+dfsg-4 (dsc) [2300 B] Get:2 http://debian.oregonstate.edu/debian unstable/main progressivemauve 1.2.0+4713+dfsg-4 (tar) [96.1 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main progressivemauve 1.2.0+4713+dfsg-4 (diff) [17.7 kB] Fetched 116 kB in 0s (0 B/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/progressivemauve-Jp5azz/progressivemauve-1.2.0+4713+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/progressivemauve-Jp5azz' with '<>' +------------------------------------------------------------------------------+ | Install crossbuild-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips:amd64 Filtered Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips:amd64 dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-tFky5c/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-tFky5c/apt_archive ./ InRelease Get:2 copy:/<>/resolver-tFky5c/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-tFky5c/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-tFky5c/apt_archive ./ Sources [360 B] Get:5 copy:/<>/resolver-tFky5c/apt_archive ./ Packages [451 B] Fetched 1768 B in 0s (0 B/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils-mips-linux-gnu cpp-8-mips-linux-gnu cpp-mips-linux-gnu cross-config crossbuild-essential-mips dpkg-cross file g++-8-mips-linux-gnu g++-mips-linux-gnu gcc-8-cross-base gcc-8-mips-linux-gnu gcc-8-mips-linux-gnu-base gcc-mips-linux-gnu libatomic1-mips-cross libc6-dev-mips-cross libc6-mips-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-mips-cross libgcc1-mips-cross libgomp1-mips-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-mips-cross libstdc++6-mips-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-mips-cross sensible-utils ucf Suggested packages: binutils-doc gcc-8-locales cpp-doc binutils-multiarch g++-8-multilib-mips-linux-gnu gcc-8-doc libstdc++6-8-dbg-mips-cross gcc-8-multilib-mips-linux-gnu libgcc1-dbg-mips-cross libgomp1-dbg-mips-cross libitm1-dbg-mips-cross libatomic1-dbg-mips-cross libasan5-dbg-mips-cross liblsan0-dbg-mips-cross libtsan0-dbg-mips-cross libubsan1-dbg-mips-cross libmpx2-dbg-mips-cross libquadmath0-dbg-mips-cross manpages-dev autoconf automake libtool flex bison gdb-mips-linux-gnu gcc-doc libyaml-shell-perl Recommended packages: libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl The following NEW packages will be installed: binutils-mips-linux-gnu cpp-8-mips-linux-gnu cpp-mips-linux-gnu cross-config crossbuild-essential-mips dpkg-cross file g++-8-mips-linux-gnu g++-mips-linux-gnu gcc-8-cross-base gcc-8-mips-linux-gnu gcc-8-mips-linux-gnu-base gcc-mips-linux-gnu libatomic1-mips-cross libc6-dev-mips-cross libc6-mips-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-mips-cross libgcc1-mips-cross libgomp1-mips-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-mips-cross libstdc++6-mips-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-mips-cross sbuild-build-depends-core-dummy:mips sensible-utils ucf 0 upgraded, 42 newly installed, 0 to remove and 0 not upgraded. Need to get 40.0 MB of archives. After this operation, 146 MB of additional disk space will be used. Get:1 copy:/<>/resolver-tFky5c/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [872 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.35-4 [242 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.35-4 [117 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.35-4 [66.3 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mips-linux-gnu amd64 2.31.1-16 [2488 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-mips-linux-gnu-base amd64 8.3.0-4cross1 [191 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-8-mips-linux-gnu amd64 8.3.0-4cross1 [6284 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mips-linux-gnu amd64 4:8.3.0-1 [16.5 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-2 [39.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-cross-base all 8.3.0-4cross1 [186 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mips-cross all 2.28-7cross1 [1215 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-mips-cross all 1:8.3.0-4cross1 [45.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mips-cross all 8.3.0-4cross1 [68.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mips-cross all 8.3.0-4cross1 [6636 B] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-8-dev-mips-cross all 8.3.0-4cross1 [208 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-mips-linux-gnu amd64 8.3.0-4cross1 [6694 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mips-linux-gnu amd64 4:8.3.0-1 [1452 B] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mips-cross all 8.3.0-4cross1 [304 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mips-cross all 4.19.20-1cross1 [1223 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mips-cross all 2.28-7cross1 [2290 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-8-dev-mips-cross all 8.3.0-4cross1 [1519 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 g++-8-mips-linux-gnu amd64 8.3.0-4cross1 [6856 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mips-linux-gnu amd64 4:8.3.0-1 [1172 B] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.1-6 [8292 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.00+dfsg-1 [58.6 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1 [344 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.27-1 [66.8 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-2 [38.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-2 [49.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mips all 12.6 [6560 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 40.0 MB in 1s (61.8 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11936 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-3+b4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-3+b4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.35-4_amd64.deb ... Unpacking libmagic-mgc (1:5.35-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.35-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-4) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.35-4_amd64.deb ... Unpacking file (1:5.35-4) ... Selecting previously unselected package ucf. Preparing to unpack .../05-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... 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Unpacking libc6-dev-mips-cross (2.28-7cross1) ... Selecting previously unselected package libstdc++-8-dev-mips-cross. Preparing to unpack .../22-libstdc++-8-dev-mips-cross_8.3.0-4cross1_all.deb ... Unpacking libstdc++-8-dev-mips-cross (8.3.0-4cross1) ... Selecting previously unselected package g++-8-mips-linux-gnu. Preparing to unpack .../23-g++-8-mips-linux-gnu_8.3.0-4cross1_amd64.deb ... Unpacking g++-8-mips-linux-gnu (8.3.0-4cross1) ... Selecting previously unselected package g++-mips-linux-gnu. Preparing to unpack .../24-g++-mips-linux-gnu_4%3a8.3.0-1_amd64.deb ... Unpacking g++-mips-linux-gnu (4:8.3.0-1) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../25-libconfig-inifiles-perl_3.000001-1_all.deb ... Unpacking libconfig-inifiles-perl (3.000001-1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../26-libio-string-perl_1.08-3_all.deb ... Unpacking libio-string-perl (1.08-3) ... 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Unpacking libxml-libxml-perl (2.0134+dfsg-1) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../33-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../34-libyaml-perl_1.27-1_all.deb ... Unpacking libyaml-perl (1.27-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../35-libconfig-auto-perl_0.44-1_all.deb ... Unpacking libconfig-auto-perl (0.44-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../36-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../37-libfile-homedir-perl_1.004-1_all.deb ... Unpacking libfile-homedir-perl (1.004-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../38-libdebian-dpkgcross-perl_2.6.15-2_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-2) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../39-dpkg-cross_2.6.15-2_all.deb ... Unpacking dpkg-cross (2.6.15-2) ... Selecting previously unselected package crossbuild-essential-mips. Preparing to unpack .../40-crossbuild-essential-mips_12.6_all.deb ... Unpacking crossbuild-essential-mips (12.6) ... Selecting previously unselected package sbuild-build-depends-core-dummy:mips. Preparing to unpack .../41-sbuild-build-depends-core-dummy_0.invalid.0_mips.deb ... Unpacking sbuild-build-depends-core-dummy:mips (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libfile-which-perl (1.23-1) ... Setting up binutils-mips-linux-gnu (2.31.1-16) ... Setting up libmagic-mgc (1:5.35-4) ... Setting up gcc-8-cross-base (8.3.0-4cross1) ... Setting up libmagic1:amd64 (1:5.35-4) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up file (1:5.35-4) ... Setting up libyaml-perl (1.27-1) ... Setting up libicu63:amd64 (63.1-6) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cross-config (2.6.15-2) ... Setting up gcc-8-mips-linux-gnu-base:amd64 (8.3.0-4cross1) ... Setting up cpp-8-mips-linux-gnu (8.3.0-4cross1) ... Setting up libc6-mips-cross (2.28-7cross1) ... Setting up linux-libc-dev-mips-cross (4.19.20-1cross1) ... Setting up sensible-utils (0.0.12) ... Setting up cpp-mips-linux-gnu (4:8.3.0-1) ... Setting up libc6-dev-mips-cross (2.28-7cross1) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up libgomp1-mips-cross (8.3.0-4cross1) ... Setting up libgcc1-mips-cross (1:8.3.0-4cross1) ... Setting up libatomic1-mips-cross (8.3.0-4cross1) ... Setting up libgcc-8-dev-mips-cross (8.3.0-4cross1) ... Setting up ucf (3.0038+nmu1) ... Setting up gcc-8-mips-linux-gnu (8.3.0-4cross1) ... Setting up libstdc++6-mips-cross (8.3.0-4cross1) ... Setting up libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-mips-linux-gnu (4:8.3.0-1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++-8-dev-mips-cross (8.3.0-4cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-8-mips-linux-gnu (8.3.0-4cross1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up g++-mips-linux-gnu (4:8.3.0-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-2) ... Setting up dpkg-cross (2.6.15-2) ... Setting up crossbuild-essential-mips (12.6) ... Setting up sbuild-build-depends-core-dummy:mips (0.invalid.0) ... Processing triggers for libc-bin (2.28-8) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mips included in any) Setup apt archive ----------------- dpkg-deb: building package 'sbuild-build-depends-essential-dummy' in '/<>/resolver-tFky5c/apt_archive/sbuild-build-depends-essential-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-tFky5c/apt_archive ./ InRelease Get:2 copy:/<>/resolver-tFky5c/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-tFky5c/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-tFky5c/apt_archive ./ Sources [480 B] Get:5 copy:/<>/resolver-tFky5c/apt_archive ./ Packages [569 B] Fetched 2012 B in 0s (0 B/s) Reading package lists... Reading package lists... Install essential build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-essential-dummy:mips 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 840 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-tFky5c/apt_archive ./ sbuild-build-depends-essential-dummy 0.invalid.0 [840 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 840 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-essential-dummy:mips. (Reading database ... 15107 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-essential-dummy_0.invalid.0_mips.deb ... Unpacking sbuild-build-depends-essential-dummy:mips (0.invalid.0) ... Setting up sbuild-build-depends-essential-dummy:mips (0.invalid.0) ... +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), pkgconf, libboost-dev, libboost-system-dev, libboost-filesystem-dev, libboost-program-options-dev, libboost-iostreams-dev, libgenome-dev, libmuscle-dev, libmems-dev Filtered Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), pkgconf, libboost-dev, libboost-system-dev, libboost-filesystem-dev, libboost-program-options-dev, libboost-iostreams-dev, libgenome-dev, libmuscle-dev, libmems-dev dpkg-deb: building package 'sbuild-build-depends-progressivemauve-dummy' in '/<>/resolver-tFky5c/apt_archive/sbuild-build-depends-progressivemauve-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-progressivemauve-dummy dpkg-scanpackages: info: Wrote 3 entries to output Packages file. Ign:1 copy:/<>/resolver-tFky5c/apt_archive ./ InRelease Get:2 copy:/<>/resolver-tFky5c/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-tFky5c/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-tFky5c/apt_archive ./ Sources [702 B] Get:5 copy:/<>/resolver-tFky5c/apt_archive ./ Packages [780 B] Fetched 2445 B in 0s (143 kB/s) Reading package lists... Reading package lists... Install progressivemauve build dependencies (apt-based resolver) ---------------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:mips gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libatomic1:mips libboost-dev:mips libboost-filesystem-dev:mips libboost-filesystem1.67-dev:mips libboost-filesystem1.67.0:mips libboost-iostreams-dev:mips libboost-iostreams1.67-dev:mips libboost-iostreams1.67.0:mips libboost-program-options-dev:mips libboost-program-options1.67-dev:mips libboost-program-options1.67.0:mips libboost-regex1.67-dev:mips libboost-regex1.67.0:mips libboost-system-dev:mips libboost-system1.67-dev:mips libboost-system1.67.0:mips libboost1.67-dev:mips libbsd0 libbz2-1.0:mips libc6:mips libc6-dev:mips libcroco3 libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:mips libgcc1:mips libgenome-dev:mips libgenome0:mips libglib2.0-0 libgomp1:mips libicu-dev:mips libicu63:mips libmems-dev:mips libmems1:mips libmuscle-dev:mips libmuscle1:mips libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:mips libstdc++6:mips libtool libuchardet0 linux-libc-dev:mips m4 man-db pkgconf po-debconf zlib1g:mips Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libboost-doc:mips libboost1.67-doc:mips libboost-atomic1.67-dev:mips libboost-chrono1.67-dev:mips libboost-container1.67-dev:mips libboost-context1.67-dev:mips libboost-coroutine1.67-dev:mips libboost-date-time1.67-dev:mips libboost-exception1.67-dev:mips libboost-fiber1.67-dev:mips libboost-graph1.67-dev:mips libboost-graph-parallel1.67-dev:mips libboost-locale1.67-dev:mips libboost-log1.67-dev:mips libboost-math1.67-dev:mips libboost-mpi1.67-dev:mips libboost-mpi-python1.67-dev:mips libboost-numpy1.67-dev:mips libboost-python1.67-dev:mips libboost-random1.67-dev:mips libboost-serialization1.67-dev:mips libboost-signals1.67-dev:mips libboost-stacktrace1.67-dev:mips libboost-test1.67-dev:mips libboost-thread1.67-dev:mips libboost-timer1.67-dev:mips libboost-type-erasure1.67-dev:mips libboost-wave1.67-dev:mips libboost1.67-tools-dev:mips libmpfrc++-dev:mips libntl-dev:mips glibc-doc:mips libc-l10n:mips locales:mips manpages-dev:mips icu-doc:mips libstdc++-8-doc:mips libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:mips libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpm2 libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:mips gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libatomic1:mips libboost-dev:mips libboost-filesystem-dev:mips libboost-filesystem1.67-dev:mips libboost-filesystem1.67.0:mips libboost-iostreams-dev:mips libboost-iostreams1.67-dev:mips libboost-iostreams1.67.0:mips libboost-program-options-dev:mips libboost-program-options1.67-dev:mips libboost-program-options1.67.0:mips libboost-regex1.67-dev:mips libboost-regex1.67.0:mips libboost-system-dev:mips libboost-system1.67-dev:mips libboost-system1.67.0:mips libboost1.67-dev:mips libbsd0 libbz2-1.0:mips libc6:mips libc6-dev:mips libcroco3 libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:mips libgcc1:mips libgenome-dev:mips libgenome0:mips libglib2.0-0 libgomp1:mips libicu-dev:mips libicu63:mips libmems-dev:mips libmems1:mips libmuscle-dev:mips libmuscle1:mips libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:mips libstdc++6:mips libtool libuchardet0 linux-libc-dev:mips m4 man-db pkgconf po-debconf sbuild-build-depends-progressivemauve-dummy:mips zlib1g:mips 0 upgraded, 66 newly installed, 0 to remove and 0 not upgraded. Need to get 49.5 MB of archives. After this operation, 326 MB of additional disk space will be used. Get:1 copy:/<>/resolver-tFky5c/apt_archive ./ sbuild-build-depends-progressivemauve-dummy 0.invalid.0 [940 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.9.1-2 [99.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-10 [547 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1 [160 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.12-3 [78.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.58.3-1 [1258 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20181013-2 [102 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.1.1 [1016 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main mips gcc-8-base mips 8.3.0-6 [191 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 icu-devtools amd64 63.1-6 [188 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main mips libgcc1 mips 1:8.3.0-6 [45.3 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main mips libc6 mips 2.28-8 [2391 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main mips libatomic1 mips 8.3.0-6 [6632 B] Get:34 http://debian.oregonstate.edu/debian unstable/main mips libgomp1 mips 8.3.0-6 [70.0 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main mips libgcc-8-dev mips 8.3.0-6 [207 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main mips libstdc++6 mips 8.3.0-6 [342 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main mips linux-libc-dev mips 4.19.28-2 [1152 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main mips libc6-dev mips 2.28-8 [2291 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main mips libstdc++-8-dev mips 8.3.0-6 [1516 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main mips libboost1.67-dev mips 1.67.0-13 [8386 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main mips libboost-dev mips 1.67.0.1 [3860 B] Get:42 http://debian.oregonstate.edu/debian unstable/main mips libboost-system1.67.0 mips 1.67.0-13 [229 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main mips libboost-filesystem1.67.0 mips 1.67.0-13 [257 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main mips libboost-system1.67-dev mips 1.67.0-13 [231 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main mips libboost-filesystem1.67-dev mips 1.67.0-13 [271 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main mips libboost-filesystem-dev mips 1.67.0.1 [3684 B] Get:47 http://debian.oregonstate.edu/debian unstable/main mips libicu63 mips 63.1-6 [8056 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main mips libboost-regex1.67.0 mips 1.67.0-13 [443 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main mips libicu-dev mips 63.1-6 [9143 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main mips libboost-regex1.67-dev mips 1.67.0-13 [533 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main mips libbz2-1.0 mips 1.0.6-9 [45.1 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main mips zlib1g mips 1:1.2.11.dfsg-1 [89.9 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main mips libboost-iostreams1.67.0 mips 1.67.0-13 [246 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main mips libboost-iostreams1.67-dev mips 1.67.0-13 [257 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main mips libboost-iostreams-dev mips 1.67.0.1 [3632 B] Get:56 http://debian.oregonstate.edu/debian unstable/main mips libboost-program-options1.67.0 mips 1.67.0-13 [334 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main mips libboost-program-options1.67-dev mips 1.67.0-13 [388 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main mips libboost-program-options-dev mips 1.67.0.1 [3660 B] Get:59 http://debian.oregonstate.edu/debian unstable/main mips libboost-system-dev mips 1.67.0.1 [3788 B] Get:60 http://debian.oregonstate.edu/debian unstable/main mips libgenome0 mips 1.3.11+svn20110227.4616-2 [103 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main mips libgenome-dev mips 1.3.11+svn20110227.4616-2 [194 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main mips libmuscle1 mips 3.7+4565-6 [239 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main mips libmems1 mips 1.6.0+4725-8+b1 [599 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main mips libmuscle-dev mips 3.7+4565-6 [336 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main mips libmems-dev mips 1.6.0+4725-8+b1 [1000 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 pkgconf amd64 1.6.0-1 [66.6 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 49.5 MB in 1s (54.8 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 15107 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package gettext-base. 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Unpacking libatomic1:mips (8.3.0-6) ... Selecting previously unselected package libgomp1:mips. Preparing to unpack .../32-libgomp1_8.3.0-6_mips.deb ... Unpacking libgomp1:mips (8.3.0-6) ... Selecting previously unselected package libgcc-8-dev:mips. Preparing to unpack .../33-libgcc-8-dev_8.3.0-6_mips.deb ... Unpacking libgcc-8-dev:mips (8.3.0-6) ... Selecting previously unselected package libstdc++6:mips. Preparing to unpack .../34-libstdc++6_8.3.0-6_mips.deb ... Unpacking libstdc++6:mips (8.3.0-6) ... Selecting previously unselected package linux-libc-dev:mips. Preparing to unpack .../35-linux-libc-dev_4.19.28-2_mips.deb ... Unpacking linux-libc-dev:mips (4.19.28-2) ... Selecting previously unselected package libc6-dev:mips. Preparing to unpack .../36-libc6-dev_2.28-8_mips.deb ... Unpacking libc6-dev:mips (2.28-8) ... Selecting previously unselected package libstdc++-8-dev:mips. Preparing to unpack .../37-libstdc++-8-dev_8.3.0-6_mips.deb ... Unpacking libstdc++-8-dev:mips (8.3.0-6) ... Selecting previously unselected package libboost1.67-dev:mips. Preparing to unpack .../38-libboost1.67-dev_1.67.0-13_mips.deb ... Unpacking libboost1.67-dev:mips (1.67.0-13) ... Selecting previously unselected package libboost-dev:mips. Preparing to unpack .../39-libboost-dev_1.67.0.1_mips.deb ... Unpacking libboost-dev:mips (1.67.0.1) ... Selecting previously unselected package libboost-system1.67.0:mips. Preparing to unpack .../40-libboost-system1.67.0_1.67.0-13_mips.deb ... Unpacking libboost-system1.67.0:mips (1.67.0-13) ... Selecting previously unselected package libboost-filesystem1.67.0:mips. Preparing to unpack .../41-libboost-filesystem1.67.0_1.67.0-13_mips.deb ... Unpacking libboost-filesystem1.67.0:mips (1.67.0-13) ... Selecting previously unselected package libboost-system1.67-dev:mips. Preparing to unpack .../42-libboost-system1.67-dev_1.67.0-13_mips.deb ... Unpacking libboost-system1.67-dev:mips (1.67.0-13) ... Selecting previously unselected package libboost-filesystem1.67-dev:mips. Preparing to unpack .../43-libboost-filesystem1.67-dev_1.67.0-13_mips.deb ... Unpacking libboost-filesystem1.67-dev:mips (1.67.0-13) ... Selecting previously unselected package libboost-filesystem-dev:mips. Preparing to unpack .../44-libboost-filesystem-dev_1.67.0.1_mips.deb ... Unpacking libboost-filesystem-dev:mips (1.67.0.1) ... Selecting previously unselected package libicu63:mips. Preparing to unpack .../45-libicu63_63.1-6_mips.deb ... Unpacking libicu63:mips (63.1-6) ... Selecting previously unselected package libboost-regex1.67.0:mips. Preparing to unpack .../46-libboost-regex1.67.0_1.67.0-13_mips.deb ... Unpacking libboost-regex1.67.0:mips (1.67.0-13) ... Selecting previously unselected package libicu-dev:mips. Preparing to unpack .../47-libicu-dev_63.1-6_mips.deb ... Unpacking libicu-dev:mips (63.1-6) ... Selecting previously unselected package libboost-regex1.67-dev:mips. 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Unpacking libboost-iostreams-dev:mips (1.67.0.1) ... Selecting previously unselected package libboost-program-options1.67.0:mips. Preparing to unpack .../54-libboost-program-options1.67.0_1.67.0-13_mips.deb ... Unpacking libboost-program-options1.67.0:mips (1.67.0-13) ... Selecting previously unselected package libboost-program-options1.67-dev:mips. Preparing to unpack .../55-libboost-program-options1.67-dev_1.67.0-13_mips.deb ... Unpacking libboost-program-options1.67-dev:mips (1.67.0-13) ... Selecting previously unselected package libboost-program-options-dev:mips. Preparing to unpack .../56-libboost-program-options-dev_1.67.0.1_mips.deb ... Unpacking libboost-program-options-dev:mips (1.67.0.1) ... Selecting previously unselected package libboost-system-dev:mips. Preparing to unpack .../57-libboost-system-dev_1.67.0.1_mips.deb ... Unpacking libboost-system-dev:mips (1.67.0.1) ... Selecting previously unselected package libgenome0:mips. Preparing to unpack .../58-libgenome0_1.3.11+svn20110227.4616-2_mips.deb ... Unpacking libgenome0:mips (1.3.11+svn20110227.4616-2) ... Selecting previously unselected package libgenome-dev:mips. Preparing to unpack .../59-libgenome-dev_1.3.11+svn20110227.4616-2_mips.deb ... Unpacking libgenome-dev:mips (1.3.11+svn20110227.4616-2) ... Selecting previously unselected package libmuscle1:mips. Preparing to unpack .../60-libmuscle1_3.7+4565-6_mips.deb ... Unpacking libmuscle1:mips (3.7+4565-6) ... Selecting previously unselected package libmems1:mips. Preparing to unpack .../61-libmems1_1.6.0+4725-8+b1_mips.deb ... Unpacking libmems1:mips (1.6.0+4725-8+b1) ... Selecting previously unselected package libmuscle-dev:mips. Preparing to unpack .../62-libmuscle-dev_3.7+4565-6_mips.deb ... Unpacking libmuscle-dev:mips (3.7+4565-6) ... Selecting previously unselected package libmems-dev:mips. Preparing to unpack .../63-libmems-dev_1.6.0+4725-8+b1_mips.deb ... Unpacking libmems-dev:mips (1.6.0+4725-8+b1) ... Selecting previously unselected package pkgconf. Preparing to unpack .../64-pkgconf_1.6.0-1_amd64.deb ... Adding 'diversion of /usr/bin/pkg-config to /usr/bin/pkg-config.real by pkgconf' Adding 'diversion of /usr/share/aclocal/pkg.m4 to /usr/share/aclocal/pkg.real.m4 by pkgconf' Adding 'diversion of /usr/share/man/man1/pkg-config.1.gz to /usr/share/man/man1/pkg-config.real.1.gz by pkgconf' Adding 'diversion of /usr/share/pkg-config-crosswrapper to /usr/share/pkg-config-crosswrapper.real by pkgconf' Unpacking pkgconf (1.6.0-1) ... Selecting previously unselected package sbuild-build-depends-progressivemauve-dummy:mips. Preparing to unpack .../65-sbuild-build-depends-progressivemauve-dummy_0.invalid.0_mips.deb ... Unpacking sbuild-build-depends-progressivemauve-dummy:mips (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:amd64 (2.58.3-1) ... No schema files found: doing nothing. Setting up linux-libc-dev:mips (4.19.28-2) ... Setting up gettext-base (0.19.8.1-9) ... Setting up pkgconf (1.6.0-1) ... Setting up autotools-dev (20180224.1) ... Setting up libncurses6:amd64 (6.1+20181013-2) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up gcc-8-base:mips (8.3.0-6) ... Setting up autopoint (0.19.8.1-9) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up icu-devtools (63.1-6) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libbsd0:amd64 (0.9.1-2) ... Setting up libelf1:amd64 (0.176-1) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libtool (2.4.6-10) ... Setting up m4 (1.4.18-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libc6:mips (2.28-8) ... Setting up libc6-dev:mips (2.28-8) ... Setting up libbz2-1.0:mips (1.0.6-9) ... Setting up libgcc1:mips (1:8.3.0-6) ... Setting up zlib1g:mips (1:1.2.11.dfsg-1) ... Setting up libgomp1:mips (8.3.0-6) ... Setting up dh-autoreconf (19) ... Setting up libatomic1:mips (8.3.0-6) ... Setting up libgcc-8-dev:mips (8.3.0-6) ... Setting up libstdc++6:mips (8.3.0-6) ... Setting up libstdc++-8-dev:mips (8.3.0-6) ... Setting up libboost1.67-dev:mips (1.67.0-13) ... Setting up libboost-program-options1.67.0:mips (1.67.0-13) ... Setting up libgenome0:mips (1.3.11+svn20110227.4616-2) ... Setting up libmuscle1:mips (3.7+4565-6) ... Setting up libgenome-dev:mips (1.3.11+svn20110227.4616-2) ... Setting up libboost-program-options1.67-dev:mips (1.67.0-13) ... Setting up debhelper (12.1.1) ... Setting up libicu63:mips (63.1-6) ... Setting up libboost-program-options-dev:mips (1.67.0.1) ... Setting up libmuscle-dev:mips (3.7+4565-6) ... Setting up libboost-iostreams1.67.0:mips (1.67.0-13) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up libboost-dev:mips (1.67.0.1) ... Setting up libboost-system1.67.0:mips (1.67.0-13) ... Setting up libicu-dev:mips (63.1-6) ... Setting up libboost-regex1.67.0:mips (1.67.0-13) ... Setting up libboost-regex1.67-dev:mips (1.67.0-13) ... Setting up libboost-filesystem1.67.0:mips (1.67.0-13) ... Setting up libboost-system1.67-dev:mips (1.67.0-13) ... Setting up libboost-iostreams1.67-dev:mips (1.67.0-13) ... Setting up libboost-filesystem1.67-dev:mips (1.67.0-13) ... Setting up libboost-system-dev:mips (1.67.0.1) ... Setting up libboost-iostreams-dev:mips (1.67.0.1) ... Setting up libmems1:mips (1.6.0+4725-8+b1) ... Setting up libboost-filesystem-dev:mips (1.67.0.1) ... Setting up libmems-dev:mips (1.6.0+4725-8+b1) ... Setting up sbuild-build-depends-progressivemauve-dummy:mips (0.invalid.0) ... Processing triggers for libc-bin (2.28-8) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.31.1-16 dpkg-dev_1.19.6 g++-8_8.3.0-6 gcc-8_8.3.0-6 libc6-dev_2.28-8 libstdc++-8-dev_8.3.0-6 libstdc++-8-dev-mips-cross_8.3.0-4cross1 libstdc++6_8.3.0-6 libstdc++6-mips-cross_8.3.0-4cross1 linux-libc-dev_4.19.28-2 Package versions: adduser_3.118 apt_1.8.0 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1 base-passwd_3.5.46 bash_5.0-3 binutils_2.31.1-16 binutils-common_2.31.1-16 binutils-mips-linux-gnu_2.31.1-16 binutils-x86-64-linux-gnu_2.31.1-16 bsdmainutils_11.1.2+b1 bsdutils_1:2.33.1-0.1 build-essential_12.6 bzip2_1.0.6-9 coreutils_8.30-3 cpp_4:8.3.0-1 cpp-8_8.3.0-6 cpp-8-mips-linux-gnu_8.3.0-4cross1 cpp-mips-linux-gnu_4:8.3.0-1 cross-config_2.6.15-2 crossbuild-essential-mips_12.6 dash_0.5.10.2-5 debconf_1.5.71 debhelper_12.1.1 debian-archive-keyring_2018.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-strip-nondeterminism_1.1.2-1 diffutils_1:3.7-2 dpkg_1.19.6 dpkg-cross_2.6.15-2 dpkg-dev_1.19.6 dwz_0.12-3 e2fsprogs_1.45.0-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-4 findutils_4.6.0+git+20190209-2 g++_4:8.3.0-1 g++-8_8.3.0-6 g++-8-mips-linux-gnu_8.3.0-4cross1 g++-mips-linux-gnu_4:8.3.0-1 gcc_4:8.3.0-1 gcc-8_8.3.0-6 gcc-8-base_8.3.0-6 gcc-8-cross-base_8.3.0-4cross1 gcc-8-mips-linux-gnu_8.3.0-4cross1 gcc-8-mips-linux-gnu-base_8.3.0-4cross1 gcc-mips-linux-gnu_4:8.3.0-1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.13-1 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 hostname_3.21 icu-devtools_63.1-6 init-system-helpers_1.56+nmu1 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-4 libapt-pkg5.0_1.8.0 libarchive-zip-perl_1.64-1 libasan5_8.3.0-6 libatomic1_8.3.0-6 libatomic1-mips-cross_8.3.0-4cross1 libattr1_1:2.4.48-4 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2 libbinutils_2.31.1-16 libblkid1_2.33.1-0.1 libboost-dev_1.67.0.1 libboost-filesystem-dev_1.67.0.1 libboost-filesystem1.67-dev_1.67.0-13 libboost-filesystem1.67.0_1.67.0-13 libboost-iostreams-dev_1.67.0.1 libboost-iostreams1.67-dev_1.67.0-13 libboost-iostreams1.67.0_1.67.0-13 libboost-program-options-dev_1.67.0.1 libboost-program-options1.67-dev_1.67.0-13 libboost-program-options1.67.0_1.67.0-13 libboost-regex1.67-dev_1.67.0-13 libboost-regex1.67.0_1.67.0-13 libboost-system-dev_1.67.0.1 libboost-system1.67-dev_1.67.0-13 libboost-system1.67.0_1.67.0-13 libboost1.67-dev_1.67.0-13 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9 libc-bin_2.28-8 libc-dev-bin_2.28-8 libc6_2.28-8 libc6-dev_2.28-8 libc6-dev-mips-cross_2.28-7cross1 libc6-mips-cross_2.28-7cross1 libcap-ng0_0.7.9-2 libcc1-0_8.3.0-6 libcom-err2_1.45.0-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.12-3 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.249 libdebian-dpkgcross-perl_2.6.15-2 libdpkg-perl_1.19.6 libelf1_0.176-1 libext2fs2_1.45.0-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.1.2-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-6 libgcc-8-dev-mips-cross_8.3.0-4cross1 libgcc1_1:8.3.0-6 libgcc1-mips-cross_1:8.3.0-4cross1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-4 libgdbm6_1.18.1-4 libgenome-dev_1.3.11+svn20110227.4616-2 libgenome0_1.3.11+svn20110227.4616-2 libglib2.0-0_2.58.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.7-2 libgomp1_8.3.0-6 libgomp1-mips-cross_8.3.0-4cross1 libgpg-error0_1.35-1 libhogweed4_3.4.1-1 libicu-dev_63.1-6 libicu63_63.1-6 libidn2-0_2.0.5-1 libio-string-perl_1.08-3 libisl19_0.20-2 libitm1_8.3.0-6 liblocale-gettext-perl_1.07-3+b4 liblsan0_8.3.0-6 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-4 libmagic1_1:5.35-4 libmems-dev_1.6.0+4725-8+b1 libmems1_1.6.0+4725-8+b1 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-6 libmuscle-dev_3.7+4565-6 libmuscle1_3.7+4565-6 libncurses6_6.1+20181013-2 libncursesw6_6.1+20181013-2 libnettle6_3.4.1-1 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre3_2:8.39-12 libperl5.28_5.28.1-6 libpipeline1_1.5.1-2 libquadmath0_8.3.0-6 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libss2_1.45.0-1 libstdc++-8-dev_8.3.0-6 libstdc++-8-dev-mips-cross_8.3.0-4cross1 libstdc++6_8.3.0-6 libstdc++6-mips-cross_8.3.0-4cross1 libsystemd0_241-2 libtasn1-6_4.13-3 libtinfo6_6.1+20181013-2 libtool_2.4.6-10 libtsan0_8.3.0-6 libubsan1_8.3.0-6 libuchardet0_0.0.6-3 libudev1_241-2 libunistring2_0.9.10-1 libuuid1_2.33.1-0.1 libxml-libxml-perl_2.0134+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.00+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-perl_1.27-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.28-2 linux-libc-dev-mips-cross_4.19.20-1cross1 login_1:4.5-1.1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17+b3 mount_2.33.1-0.1 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-6 perl-base_5.28.1-6 perl-modules-5.28_5.28.1-6 pkgconf_1.6.0-1 po-debconf_1.0.21 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-essential-dummy_0.invalid.0 sbuild-build-depends-progressivemauve-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-8 tar_1.30+dfsg-5 tzdata_2019a-1 ucf_3.0038+nmu1 util-linux_2.33.1-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Tue Dec 4 09:10:58 2018 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./progressivemauve_1.2.0+4713+dfsg-4.dsc dpkg-source: info: extracting progressivemauve in /<>/progressivemauve-1.2.0+4713+dfsg dpkg-source: info: unpacking progressivemauve_1.2.0+4713+dfsg.orig.tar.xz dpkg-source: info: unpacking progressivemauve_1.2.0+4713+dfsg-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_build.patch dpkg-source: info: applying do_not_build_static_binaries.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying use-native-getopt.patch dpkg-source: info: applying adapt-to-unversioned-libs.patch dpkg-source: info: applying fix_FTBFS_boost1.67.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mips DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-e97f428c-17e4-4f73-a5e1-60d7afcbb767 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package progressivemauve dpkg-buildpackage: info: source version 1.2.0+4713+dfsg-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type mips-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mips fakeroot debian/rules clean dh clean dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a configure.ac:21: installing 'config/compile' configure.ac:9: installing 'config/config.guess' configure.ac:9: installing 'config/config.sub' configure.ac:11: installing 'config/install-sh' configure.ac:11: installing 'config/missing' Makefile.am: installing './INSTALL' src/Makefile.am:12: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') src/Makefile.am: installing 'config/depcomp' src/Makefile.am:51: warning: variable 'EXTRA_mauveStatic_SOURCES' is defined but no program or src/Makefile.am:51: library has 'mauveStatic' as canonical name (possible typo) src/Makefile.am:49: warning: variable 'mauveStatic_SOURCES' is defined but no program or src/Makefile.am:49: library has 'mauveStatic' as canonical name (possible typo) src/Makefile.am:160: warning: variable 'progressiveMauveStatic_SOURCES' is defined but no program or src/Makefile.am:160: library has 'progressiveMauveStatic' as canonical name (possible typo) src/Makefile.am:50: warning: variable 'mauveStatic_LDADD' is defined but no program or src/Makefile.am:50: library has 'mauveStatic' as canonical name (possible typo) src/Makefile.am:161: warning: variable 'progressiveMauveStatic_LDADD' is defined but no program or src/Makefile.am:161: library has 'progressiveMauveStatic' as canonical name (possible typo) src/Makefile.am:52: warning: variable 'mauveStatic_DEPENDENCIES' is defined but no program or src/Makefile.am:52: library has 'mauveStatic' as canonical name (possible typo) dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/mips-linux-gnu --libexecdir=\${prefix}/lib/mips-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=mips-linux-gnu configure: WARNING: unrecognized options: --disable-maintainer-mode configure: loading site script /etc/dpkg-cross/cross-config.mips checking build system type... x86_64-pc-linux-gnu checking host system type... mips-unknown-linux-gnu checking target system type... mips-unknown-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for mips-linux-gnu-strip... mips-linux-gnu-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for mips-linux-gnu-gcc... mips-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether mips-linux-gnu-gcc accepts -g... yes checking for mips-linux-gnu-gcc option to accept ISO C89... none needed checking whether mips-linux-gnu-gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of mips-linux-gnu-gcc... none checking for mips-linux-gnu-g++... mips-linux-gnu-g++ checking whether we are using the GNU C++ compiler... yes checking whether mips-linux-gnu-g++ accepts -g... yes checking dependency style of mips-linux-gnu-g++... none checking whether ln -s works... yes checking how to run the C preprocessor... mips-linux-gnu-gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for getopt_long... yes checking for getopt... yes checking for mips-linux-gnu-pkg-config... /usr/bin/mips-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for DEPS... yes checking for an ANSI C-conforming const... yes checking for inline... inline checking whether time.h and sys/time.h may both be included... yes checking for memset... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking libintl.h usability... yes checking libintl.h presence... yes checking for libintl.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking wchar.h usability... yes checking wchar.h presence... yes checking for wchar.h... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... (cached) yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for size_t... yes checking whether mips-linux-gnu-gcc needs -traditional... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --disable-maintainer-mode dh_auto_build -a make -j1 make[1]: Entering directory '/<>/progressivemauve-1.2.0+4713+dfsg' Making all in src make[2]: Entering directory '/<>/progressivemauve-1.2.0+4713+dfsg/src' make all-am make[3]: Entering directory '/<>/progressivemauve-1.2.0+4713+dfsg/src' mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mauveAligner.o mauveAligner.cpp In file included from /usr/mips-linux-gnu/include/c++/8/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from mauveAligner.cpp:30: /usr/mips-linux-gnu/include/c++/8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] #warning \ ^~~~~~~ mauveAligner.cpp:413:48: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] cerr << "mauveAligner " << " build date " << __DATE__ << " at " << __TIME__ << endl; ^~~~~~~~ mauveAligner.cpp:413:70: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] cerr << "mauveAligner " << " build date " << __DATE__ << " at " << __TIME__ << endl; ^~~~~~~~ mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -Wl,-z,relro -Wl,-z,now -o mauveAligner mauveAligner.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scoreAlignment.o scoreAlignment.cpp mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o scoreAlignment scoreAlignment.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o uniqueMerCount.o uniqueMerCount.cpp mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o uniqueMerCount uniqueMerCount.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o toRawSequence.o toRawSequence.cpp mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o toRawSequence toRawSequence.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mfa2xmfa.o mfa2xmfa.cpp mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o mfa2xmfa mfa2xmfa.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o addUnalignedIntervals.o addUnalignedIntervals.cpp In file included from /usr/mips-linux-gnu/include/c++/8/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from addUnalignedIntervals.cpp:2: /usr/mips-linux-gnu/include/c++/8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] #warning \ ^~~~~~~ mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o addUnalignedIntervals addUnalignedIntervals.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o toMultiFastA.o toMultiFastA.cpp In file included from /usr/mips-linux-gnu/include/c++/8/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from toMultiFastA.cpp:2: /usr/mips-linux-gnu/include/c++/8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] #warning \ ^~~~~~~ mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o toMultiFastA toMultiFastA.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o getAlignmentWindows.o getAlignmentWindows.cpp In file included from /usr/mips-linux-gnu/include/c++/8/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from getAlignmentWindows.cpp:14: /usr/mips-linux-gnu/include/c++/8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] #warning \ ^~~~~~~ mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o getAlignmentWindows getAlignmentWindows.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o uniquifyTrees.o uniquifyTrees.cpp mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o uniquifyTrees uniquifyTrees.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o toGrimmFormat.o toGrimmFormat.cpp mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o toGrimmFormat toGrimmFormat.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mauveToXMFA.o mauveToXMFA.cpp mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o mauveToXMFA mauveToXMFA.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o stripGapColumns.o stripGapColumns.cpp mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o stripGapColumns stripGapColumns.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o progressiveMauve.o progressiveMauve.cpp In file included from /usr/mips-linux-gnu/include/c++/8/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from progressiveMauve.cpp:26: /usr/mips-linux-gnu/include/c++/8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] #warning \ ^~~~~~~ progressiveMauve.cpp:417:52: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] cerr << "progressiveMauve " << " build date " << __DATE__ << " at " << __TIME__ << endl; ^~~~~~~~ progressiveMauve.cpp:417:74: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] cerr << "progressiveMauve " << " build date " << __DATE__ << " at " << __TIME__ << endl; ^~~~~~~~ mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o UniqueMatchFinder.o UniqueMatchFinder.cpp mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o progressiveMauve progressiveMauve.o UniqueMatchFinder.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o extractBCITrees.o extractBCITrees.cpp mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o extractBCITrees extractBCITrees.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o createBackboneMFA.o createBackboneMFA.cpp In file included from /usr/mips-linux-gnu/include/c++/8/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from createBackboneMFA.cpp:2: /usr/mips-linux-gnu/include/c++/8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] #warning \ ^~~~~~~ mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o createBackboneMFA createBackboneMFA.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o repeatoire.o repeatoire.cpp In file included from /usr/mips-linux-gnu/include/c++/8/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from repeatoire.cpp:4: /usr/mips-linux-gnu/include/c++/8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] #warning \ ^~~~~~~ mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o repeatoire repeatoire.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o alignmentProjector.o alignmentProjector.cpp In file included from /usr/mips-linux-gnu/include/c++/8/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from /usr/include/libMems/ProgressiveAligner.h:21, from alignmentProjector.cpp:18: /usr/mips-linux-gnu/include/c++/8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] #warning \ ^~~~~~~ mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o alignmentProjector alignmentProjector.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o stripSubsetLCBs.o stripSubsetLCBs.cpp mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o stripSubsetLCBs stripSubsetLCBs.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o projectAndStrip.o projectAndStrip.cpp In file included from /usr/mips-linux-gnu/include/c++/8/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from projectAndStrip.cpp:18: /usr/mips-linux-gnu/include/c++/8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] #warning \ ^~~~~~~ mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o projectAndStrip projectAndStrip.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o makeBadgerMatrix.o makeBadgerMatrix.cpp mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o makeBadgerMatrix makeBadgerMatrix.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o randomGeneSample.o randomGeneSample.cpp In file included from /usr/mips-linux-gnu/include/c++/8/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from randomGeneSample.cpp:18: /usr/mips-linux-gnu/include/c++/8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] #warning \ ^~~~~~~ mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o randomGeneSample randomGeneSample.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o getOrthologList.o getOrthologList.cpp In file included from /usr/mips-linux-gnu/include/c++/8/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from getOrthologList.cpp:18: /usr/mips-linux-gnu/include/c++/8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] #warning \ ^~~~~~~ mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o getOrthologList getOrthologList.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o bbFilter.o bbFilter.cpp In file included from /usr/mips-linux-gnu/include/c++/8/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from /usr/include/libMems/Backbone.h:24, from bbFilter.cpp:1: /usr/mips-linux-gnu/include/c++/8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] #warning \ ^~~~~~~ mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o bbFilter bbFilter.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o bbAnalyze.o bbAnalyze.cpp In file included from /usr/mips-linux-gnu/include/c++/8/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from /usr/include/libMems/Backbone.h:24, from bbAnalyze.cpp:4: /usr/mips-linux-gnu/include/c++/8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] #warning \ ^~~~~~~ mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o bbAnalyze bbAnalyze.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o backbone_global_to_local.o backbone_global_to_local.cpp In file included from /usr/mips-linux-gnu/include/c++/8/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from /usr/include/libMems/Backbone.h:24, from backbone_global_to_local.cpp:2: /usr/mips-linux-gnu/include/c++/8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] #warning \ ^~~~~~~ mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o backbone_global_to_local backbone_global_to_local.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o xmfa2maf.o xmfa2maf.cpp In file included from /usr/mips-linux-gnu/include/c++/8/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from /usr/include/libMems/ProgressiveAligner.h:21, from xmfa2maf.cpp:2: /usr/mips-linux-gnu/include/c++/8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] #warning \ ^~~~~~~ mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o xmfa2maf xmfa2maf.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o coordinateTranslate.o coordinateTranslate.cpp mips-linux-gnu-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -fdebug-prefix-map=/<>/progressivemauve-1.2.0+4713+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o coordinateTranslate coordinateTranslate.o -L/usr/lib/mips-linux-gnu -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE make[3]: Leaving directory '/<>/progressivemauve-1.2.0+4713+dfsg/src' make[2]: Leaving directory '/<>/progressivemauve-1.2.0+4713+dfsg/src' make[2]: Entering directory '/<>/progressivemauve-1.2.0+4713+dfsg' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/<>/progressivemauve-1.2.0+4713+dfsg' make[1]: Leaving directory '/<>/progressivemauve-1.2.0+4713+dfsg' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/progressivemauve-1.2.0\+4713\+dfsg/debian/progressivemauve AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>/progressivemauve-1.2.0+4713+dfsg' Making install in src make[2]: Entering directory '/<>/progressivemauve-1.2.0+4713+dfsg/src' make[3]: Entering directory '/<>/progressivemauve-1.2.0+4713+dfsg/src' /bin/mkdir -p '/<>/progressivemauve-1.2.0+4713+dfsg/debian/progressivemauve/usr/bin' /usr/bin/install -c mauveAligner scoreAlignment uniqueMerCount toRawSequence mfa2xmfa addUnalignedIntervals toMultiFastA getAlignmentWindows uniquifyTrees toGrimmFormat mauveToXMFA stripGapColumns progressiveMauve extractBCITrees createBackboneMFA repeatoire alignmentProjector stripSubsetLCBs projectAndStrip makeBadgerMatrix randomGeneSample getOrthologList bbFilter bbAnalyze backbone_global_to_local xmfa2maf coordinateTranslate '/<>/progressivemauve-1.2.0+4713+dfsg/debian/progressivemauve/usr/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/progressivemauve-1.2.0+4713+dfsg/src' make[2]: Leaving directory '/<>/progressivemauve-1.2.0+4713+dfsg/src' make[2]: Entering directory '/<>/progressivemauve-1.2.0+4713+dfsg' make[3]: Entering directory '/<>/progressivemauve-1.2.0+4713+dfsg' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/progressivemauve-1.2.0+4713+dfsg' make[2]: Leaving directory '/<>/progressivemauve-1.2.0+4713+dfsg' make[1]: Leaving directory '/<>/progressivemauve-1.2.0+4713+dfsg' dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/progressivemauve/usr/bin/stripSubsetLCBs debian/progressivemauve/usr/bin/toMultiFastA debian/progressivemauve/usr/bin/xmfa2maf debian/progressivemauve/usr/bin/addUnalignedIntervals debian/progressivemauve/usr/bin/createBackboneMFA debian/progressivemauve/usr/bin/scoreAlignment debian/progressivemauve/usr/bin/uniqueMerCount debian/progressivemauve/usr/bin/makeBadgerMatrix debian/progressivemauve/usr/bin/progressiveMauve debian/progressivemauve/usr/bin/randomGeneSample debian/progressivemauve/usr/bin/bbFilter debian/progressivemauve/usr/bin/getOrthologList debian/progressivemauve/usr/bin/repeatoire debian/progressivemauve/usr/bin/extractBCITrees debian/progressivemauve/usr/bin/toRawSequence debian/progressivemauve/usr/bin/mauveAligner debian/progressivemauve/usr/bin/getAlignmentWindows debian/progressivemauve/usr/bin/uniquifyTrees debian/progressivemauve/usr/bin/mauveToXMFA debian/progressivemauve/usr/bin/backbone_global_to_local debian/progressivemauve/usr/bin/projectAndStrip debian/progressivemauve/usr/bin/stripGapColumns debian/progressivemauve/usr/bin/mfa2xmfa debian/progressivemauve/usr/bin/alignmentProjector debian/progressivemauve/usr/bin/bbAnalyze debian/progressivemauve/usr/bin/coordinateTranslate debian/progressivemauve/usr/bin/toGrimmFormat were not linked against librt.so.1 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/progressivemauve/usr/bin/stripSubsetLCBs debian/progressivemauve/usr/bin/toMultiFastA debian/progressivemauve/usr/bin/xmfa2maf debian/progressivemauve/usr/bin/addUnalignedIntervals debian/progressivemauve/usr/bin/createBackboneMFA debian/progressivemauve/usr/bin/scoreAlignment debian/progressivemauve/usr/bin/uniqueMerCount debian/progressivemauve/usr/bin/makeBadgerMatrix debian/progressivemauve/usr/bin/progressiveMauve debian/progressivemauve/usr/bin/randomGeneSample debian/progressivemauve/usr/bin/bbFilter debian/progressivemauve/usr/bin/getOrthologList debian/progressivemauve/usr/bin/repeatoire debian/progressivemauve/usr/bin/extractBCITrees debian/progressivemauve/usr/bin/toRawSequence debian/progressivemauve/usr/bin/mauveAligner debian/progressivemauve/usr/bin/getAlignmentWindows debian/progressivemauve/usr/bin/uniquifyTrees debian/progressivemauve/usr/bin/mauveToXMFA debian/progressivemauve/usr/bin/backbone_global_to_local debian/progressivemauve/usr/bin/projectAndStrip debian/progressivemauve/usr/bin/stripGapColumns debian/progressivemauve/usr/bin/mfa2xmfa debian/progressivemauve/usr/bin/alignmentProjector debian/progressivemauve/usr/bin/bbAnalyze debian/progressivemauve/usr/bin/coordinateTranslate debian/progressivemauve/usr/bin/toGrimmFormat were not linked against libpthread.so.0 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/progressivemauve/usr/bin/stripSubsetLCBs debian/progressivemauve/usr/bin/toMultiFastA debian/progressivemauve/usr/bin/xmfa2maf debian/progressivemauve/usr/bin/addUnalignedIntervals debian/progressivemauve/usr/bin/createBackboneMFA debian/progressivemauve/usr/bin/scoreAlignment debian/progressivemauve/usr/bin/uniqueMerCount debian/progressivemauve/usr/bin/makeBadgerMatrix debian/progressivemauve/usr/bin/progressiveMauve debian/progressivemauve/usr/bin/randomGeneSample debian/progressivemauve/usr/bin/bbFilter debian/progressivemauve/usr/bin/getOrthologList debian/progressivemauve/usr/bin/repeatoire debian/progressivemauve/usr/bin/extractBCITrees debian/progressivemauve/usr/bin/toRawSequence debian/progressivemauve/usr/bin/mauveAligner debian/progressivemauve/usr/bin/getAlignmentWindows debian/progressivemauve/usr/bin/uniquifyTrees debian/progressivemauve/usr/bin/mauveToXMFA debian/progressivemauve/usr/bin/backbone_global_to_local debian/progressivemauve/usr/bin/projectAndStrip debian/progressivemauve/usr/bin/stripGapColumns debian/progressivemauve/usr/bin/mfa2xmfa debian/progressivemauve/usr/bin/alignmentProjector debian/progressivemauve/usr/bin/bbAnalyze debian/progressivemauve/usr/bin/coordinateTranslate debian/progressivemauve/usr/bin/toGrimmFormat were not linked against libMUSCLE.so.1 (they use none of the library's symbols) dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'progressivemauve' in '../progressivemauve_1.2.0+4713+dfsg-4_mips.deb'. dpkg-deb: building package 'progressivemauve-dbgsym' in '../progressivemauve-dbgsym_1.2.0+4713+dfsg-4_mips.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../progressivemauve_1.2.0+4713+dfsg-4_mips.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-04-07T11:00:03Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/resolver-tFky5c/apt_archive/sbuild-build-depends-lintian-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-lintian-dummy sbuild-build-depends-progressivemauve-dummy dpkg-scanpackages: info: Wrote 4 entries to output Packages file. Ign:1 copy:/<>/resolver-tFky5c/apt_archive ./ InRelease Get:2 copy:/<>/resolver-tFky5c/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-tFky5c/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-tFky5c/apt_archive ./ Sources [821 B] Get:5 copy:/<>/resolver-tFky5c/apt_archive ./ Packages [897 B] Fetched 2681 B in 0s (157 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libdata-dump-perl ca-certificates libhtml-template-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libunicode-utf8-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:mips t1utils 0 upgraded, 48 newly installed, 0 to remove and 0 not upgraded. Need to get 7779 kB of archives. After this operation, 20.8 MB of additional disk space will be used. Get:1 copy:/<>/resolver-tFky5c/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 5.6 [19.4 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 7.0-5 [70.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.62-1 [33.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.2-1 [49.4 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.13-1 [512 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.27.2-2 [640 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.13-1 [867 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.34+b1 [71.2 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.40-1 [222 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.21-1+b3 [13.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.41-1+b1 [14.6 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1b-1 [1531 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 3 [6782 B] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.85-2+b1 [308 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.060-3 [207 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.18-1 [88.5 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.19-1 [372 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.39-1 [74.5 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.72-1 [262 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b5 [33.7 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-1 [101 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b4 [64.2 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libparse-debianchangelog-perl all 1.2.0-13 [59.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.76+repack-1 [33.1 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2 [90.4 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.12.0 [1190 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7779 kB in 0s (38.6 MB/s) Selecting previously unselected package netbase. 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I: Lintian run was successful. +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ progressivemauve_1.2.0+4713+dfsg-4_mips.changes: ------------------------------------------------ Format: 1.8 Date: Tue, 04 Dec 2018 10:03:31 +0100 Source: progressivemauve Binary: progressivemauve progressivemauve-dbgsym Built-For-Profiles: cross nocheck Architecture: mips Version: 1.2.0+4713+dfsg-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: progressivemauve - multiple genome alignment algorithms Closes: 914049 Changes: progressivemauve (1.2.0+4713+dfsg-4) unstable; urgency=medium . [ Giovanni Mascellani ] * Fix FTBFS with boost1.67 Closes: #914049 . [ Andreas Tille ] * Standards-Version: 4.2.1 Checksums-Sha1: c12af66ace57e5a3fc3dc3e43711dc4020021991 19592236 progressivemauve-dbgsym_1.2.0+4713+dfsg-4_mips.deb c56caa8b7b09c99e7ca3c3f645e952cf5808fe0f 5501 progressivemauve_1.2.0+4713+dfsg-4_mips.buildinfo aa18bb4de030f99501cc602de031d95f15a54bcd 827124 progressivemauve_1.2.0+4713+dfsg-4_mips.deb Checksums-Sha256: 8b77faf2071ebc515e6630d68e5b47566898520c393acddd11d80bd40f12c8a5 19592236 progressivemauve-dbgsym_1.2.0+4713+dfsg-4_mips.deb 3ff9e035939cd3c3ddbcc780256e7d746b9e24b077454da4df3f4fdb16f91e38 5501 progressivemauve_1.2.0+4713+dfsg-4_mips.buildinfo 3321b7feb20b11025347dbdec0c310545206f960eb12dddbc9018d0686106859 827124 progressivemauve_1.2.0+4713+dfsg-4_mips.deb Files: b9d800b21633715a321dfca14a047fa3 19592236 debug optional progressivemauve-dbgsym_1.2.0+4713+dfsg-4_mips.deb 01ddbd7b51f03ec2045868288d620dd6 5501 science optional progressivemauve_1.2.0+4713+dfsg-4_mips.buildinfo 4d898235e1e85300f29b27ae07fcd443 827124 science optional progressivemauve_1.2.0+4713+dfsg-4_mips.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: progressivemauve Binary: progressivemauve Architecture: mips Version: 1.2.0+4713+dfsg-4 Checksums-Md5: b9d800b21633715a321dfca14a047fa3 19592236 progressivemauve-dbgsym_1.2.0+4713+dfsg-4_mips.deb 4d898235e1e85300f29b27ae07fcd443 827124 progressivemauve_1.2.0+4713+dfsg-4_mips.deb Checksums-Sha1: c12af66ace57e5a3fc3dc3e43711dc4020021991 19592236 progressivemauve-dbgsym_1.2.0+4713+dfsg-4_mips.deb aa18bb4de030f99501cc602de031d95f15a54bcd 827124 progressivemauve_1.2.0+4713+dfsg-4_mips.deb Checksums-Sha256: 8b77faf2071ebc515e6630d68e5b47566898520c393acddd11d80bd40f12c8a5 19592236 progressivemauve-dbgsym_1.2.0+4713+dfsg-4_mips.deb 3321b7feb20b11025347dbdec0c310545206f960eb12dddbc9018d0686106859 827124 progressivemauve_1.2.0+4713+dfsg-4_mips.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sun, 07 Apr 2019 11:00:02 +0000 Build-Path: /<>/progressivemauve-1.2.0+4713+dfsg Installed-Build-Depends: autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 10.1), base-passwd (= 3.5.46), bash (= 5.0-3), binutils (= 2.31.1-16), binutils-common (= 2.31.1-16), binutils-x86-64-linux-gnu (= 2.31.1-16), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.33.1-0.1), build-essential (= 12.6), bzip2 (= 1.0.6-9), coreutils (= 8.30-3), cpp (= 4:8.3.0-1), cpp-8 (= 8.3.0-6), dash (= 0.5.10.2-5), debconf (= 1.5.71), debhelper (= 12.1.1), debianutils (= 4.8.6.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.1.2-1), diffutils (= 1:3.7-2), dpkg (= 1.19.6), dpkg-dev (= 1.19.6), dwz (= 0.12-3), fdisk (= 2.33.1-0.1), file (= 1:5.35-4), findutils (= 4.6.0+git+20190209-2), g++ (= 4:8.3.0-1), g++-8 (= 8.3.0-6), gcc (= 4:8.3.0-1), gcc-8 (= 8.3.0-6), gcc-8-base (= 8.3.0-6), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), grep (= 3.3-1), groff-base (= 1.22.4-3), gzip (= 1.9-3), hostname (= 3.21), icu-devtools (= 63.1-6), init-system-helpers (= 1.56+nmu1), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-4), libarchive-zip-perl (= 1.64-1), libasan5 (= 8.3.0-6), libatomic1 (= 8.3.0-6), libattr1 (= 1:2.4.48-4), libaudit-common (= 1:2.8.4-2), libaudit1 (= 1:2.8.4-2), libbinutils (= 2.31.1-16), libblkid1 (= 2.33.1-0.1), libboost-dev (= 1.67.0.1), libboost-filesystem-dev (= 1.67.0.1), libboost-filesystem1.67-dev (= 1.67.0-13), libboost-filesystem1.67.0 (= 1.67.0-13), libboost-iostreams-dev (= 1.67.0.1), libboost-iostreams1.67-dev (= 1.67.0-13), libboost-iostreams1.67.0 (= 1.67.0-13), libboost-program-options-dev (= 1.67.0.1), libboost-program-options1.67-dev (= 1.67.0-13), libboost-program-options1.67.0 (= 1.67.0-13), libboost-regex1.67-dev (= 1.67.0-13), libboost-regex1.67.0 (= 1.67.0-13), libboost-system-dev (= 1.67.0.1), libboost-system1.67-dev (= 1.67.0-13), libboost-system1.67.0 (= 1.67.0-13), libboost1.67-dev (= 1.67.0-13), libbsd0 (= 0.9.1-2), libbz2-1.0 (= 1.0.6-9), libc-bin (= 2.28-8), libc-dev-bin (= 2.28-8), libc6 (= 2.28-8), libc6-dev (= 2.28-8), libcap-ng0 (= 0.7.9-2), libcc1-0 (= 8.3.0-6), libcroco3 (= 0.6.12-3), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.249), libdpkg-perl (= 1.19.6), libelf1 (= 0.176-1), libfdisk1 (= 2.33.1-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.1.2-1), libgcc-8-dev (= 8.3.0-6), libgcc1 (= 1:8.3.0-6), libgcrypt20 (= 1.8.4-5), libgdbm-compat4 (= 1.18.1-4), libgdbm6 (= 1.18.1-4), libgenome-dev (= 1.3.11+svn20110227.4616-2), libgenome0 (= 1.3.11+svn20110227.4616-2), libglib2.0-0 (= 2.58.3-1), libgmp10 (= 2:6.1.2+dfsg-4), libgomp1 (= 8.3.0-6), libgpg-error0 (= 1.35-1), libicu-dev (= 63.1-6), libicu63 (= 63.1-6), libisl19 (= 0.20-2), libitm1 (= 8.3.0-6), liblsan0 (= 8.3.0-6), liblz4-1 (= 1.8.3-1), liblzma5 (= 5.2.4-1), libmagic-mgc (= 1:5.35-4), libmagic1 (= 1:5.35-4), libmems-dev (= 1.6.0+4725-8+b1), libmems1 (= 1.6.0+4725-8+b1), libmount1 (= 2.33.1-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-6), libmuscle-dev (= 3.7+4565-6), libmuscle1 (= 3.7+4565-6), libncurses6 (= 6.1+20181013-2), libncursesw6 (= 6.1+20181013-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre3 (= 2:8.39-12), libperl5.28 (= 5.28.1-6), libpipeline1 (= 1.5.1-2), libquadmath0 (= 8.3.0-6), libseccomp2 (= 2.3.3-4), libselinux1 (= 2.8-1+b1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.33.1-0.1), libstdc++-8-dev (= 8.3.0-6), libstdc++6 (= 8.3.0-6), libsystemd0 (= 241-2), libtinfo6 (= 6.1+20181013-2), libtool (= 2.4.6-10), libtsan0 (= 8.3.0-6), libubsan1 (= 8.3.0-6), libuchardet0 (= 0.0.6-3), libudev1 (= 241-2), libunistring2 (= 0.9.10-1), libuuid1 (= 2.33.1-0.1), libxml2 (= 2.9.4+dfsg1-7+b3), linux-libc-dev (= 4.19.28-2), login (= 1:4.5-1.1), m4 (= 1.4.18-2), make (= 4.2.1-1.2), man-db (= 2.8.5-2), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20181013-2), ncurses-bin (= 6.1+20181013-2), patch (= 2.7.6-3), perl (= 5.28.1-6), perl-base (= 5.28.1-6), perl-modules-5.28 (= 5.28.1-6), pkgconf (= 1.6.0-1), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.93-8), tar (= 1.30+dfsg-5), util-linux (= 2.33.1-0.1), xz-utils (= 5.2.4-1), zlib1g (= 1:1.2.11.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="POSIX" SOURCE_DATE_EPOCH="1543914211" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ progressivemauve-dbgsym_1.2.0+4713+dfsg-4_mips.deb -------------------------------------------------- new Debian package, version 2.0. size 19592236 bytes: control archive=1784 bytes. 1493 bytes, 12 lines control 2862 bytes, 27 lines md5sums Package: progressivemauve-dbgsym Source: progressivemauve Version: 1.2.0+4713+dfsg-4 Auto-Built-Package: debug-symbols Architecture: mips Maintainer: Debian Med Packaging Team Installed-Size: 20263 Depends: progressivemauve (= 1.2.0+4713+dfsg-4) Section: debug Priority: optional Description: debug symbols for progressivemauve Build-Ids: 04a92bb5cc94012d60eb32af1aa8fd0c04cc1b8b 0594ba43c3067b43b9ceee99fb9eee442ae0120b 082a2b187491900e5c3a08c8d8bbad5293d4c604 363eb56e0ac4ce03340e96a899bdd85797cdaa0f 3de2ed9e1786c1041f2e0cdae3261b12544b615a 46fb6ca2456058da4ebb59fa8bedcdddf5b87ce0 48262770c807533817b5cbe5a4172b51905f2809 6766764150a5a05a28de1dec16a8a9ab73b23276 6af4837eb09ea6d556ffe66742b3639369d6f1fa 6f79ff818cfe5913e0eb64b990ec20811d56baab 7ea8679be1723f56081a1fee3edcd44544add085 806564877cef76b2ffd393b2073d516e805e741e 80da4f5e824b67b06665fab710872390a89557a6 87fc319abbffdfb5589844b8388094d85ead6b00 91c03cd45c507d2cfe8fd14013ce9f95b78a4ff2 9998c908433d192e819b17b778869e05573d561c 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09:03 ./usr/share/doc/progressivemauve-dbgsym -> progressivemauve progressivemauve_1.2.0+4713+dfsg-4_mips.deb ------------------------------------------- new Debian package, version 2.0. size 827124 bytes: control archive=2496 bytes. 1926 bytes, 36 lines control 2744 bytes, 42 lines md5sums Package: progressivemauve Version: 1.2.0+4713+dfsg-4 Architecture: mips Maintainer: Debian Med Packaging Team Installed-Size: 5648 Depends: libboost-filesystem1.67.0, libboost-iostreams1.67.0, libboost-program-options1.67.0, libboost-system1.67.0, libc6 (>= 2.4), libgcc1 (>= 1:4.2), libgenome0, libmems1, libmuscle1 (>= 3.7+4565), libstdc++6 (>= 5.2) Enhances: mauve-aligner Section: science Priority: optional Homepage: http://darlinglab.org/mauve/user-guide/mauvealigner.html Description: multiple genome alignment algorithms The mauveAligner and progressiveMauve alignment algorithms have been implemented as command-line programs included with the downloadable Mauve software. When run from the command-line, these programs provide options not yet available in the graphical interface. . Mauve is a system for efficiently constructing multiple genome alignments in the presence of large-scale evolutionary events such as rearrangement and inversion. Multiple genome alignment provides a basis for research into comparative genomics and the study of evolutionary dynamics. Aligning whole genomes is a fundamentally different problem than aligning short sequences. . Mauve has been developed with the idea that a multiple genome aligner should require only modest computational resources. It employs algorithmic techniques that scale well in the amount of sequence being aligned. For example, a pair of Y. pestis genomes can be aligned in under a minute, while a group of 9 divergent Enterobacterial genomes can be aligned in a few hours. . Mauve computes and interactively visualizes genome sequence comparisons. Using FastA or GenBank sequence data, Mauve constructs multiple genome alignments that identify large-scale rearrangement, gene gain, gene loss, indels, and nucleotide substutition. . Mauve is developed at the University of Wisconsin. drwxr-xr-x root/root 0 2018-12-04 09:03 ./ drwxr-xr-x root/root 0 2018-12-04 09:03 ./usr/ drwxr-xr-x root/root 0 2018-12-04 09:03 ./usr/bin/ -rwxr-xr-x root/root 184936 2018-12-04 09:03 ./usr/bin/addUnalignedIntervals -rwxr-xr-x root/root 269304 2018-12-04 09:03 ./usr/bin/alignmentProjector -rwxr-xr-x root/root 189076 2018-12-04 09:03 ./usr/bin/backbone_global_to_local -rwxr-xr-x root/root 456292 2018-12-04 09:03 ./usr/bin/bbAnalyze -rwxr-xr-x root/root 141560 2018-12-04 09:03 ./usr/bin/bbFilter -rwxr-xr-x root/root 180724 2018-12-04 09:03 ./usr/bin/coordinateTranslate -rwxr-xr-x root/root 180736 2018-12-04 09:03 ./usr/bin/createBackboneMFA -rwxr-xr-x root/root 110436 2018-12-04 09:03 ./usr/bin/extractBCITrees -rwxr-xr-x root/root 218428 2018-12-04 09:03 ./usr/bin/getAlignmentWindows -rwxr-xr-x root/root 277212 2018-12-04 09:03 ./usr/bin/getOrthologList -rwxr-xr-x root/root 189064 2018-12-04 09:03 ./usr/bin/makeBadgerMatrix -rwxr-xr-x 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lrwxrwxrwx root/root 0 2018-12-04 09:03 ./usr/share/man/man1/xmfa2maf.1.gz -> addUnalignedIntervals.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 226884 Build-Time: 413 Distribution: unstable Foreign Architectures: mips Host Architecture: mips Install-Time: 26 Job: progressivemauve_1.2.0+4713+dfsg-4 Lintian: pass Machine Architecture: amd64 Package: progressivemauve Package-Time: 448 Source-Version: 1.2.0+4713+dfsg-4 Space: 226884 Status: successful Version: 1.2.0+4713+dfsg-4 -------------------------------------------------------------------------------- Finished at 2019-04-07T11:00:03Z Build needed 00:07:28, 226884k disk space