sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +===============================================================================+ | progressivemauve 1.2.0+4713+dfsg-5 (mips64el) Tue, 08 Jun 2021 00:33:58 +0000 | +===============================================================================+ Package: progressivemauve Version: 1.2.0+4713+dfsg-5 Source Version: 1.2.0+4713+dfsg-5 Distribution: unstable Machine Architecture: amd64 Host Architecture: mips64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-0f8e9b64-be8d-47e5-bd9a-0aa4511cd731' with '<>' I: NOTICE: Log filtering will replace 'build/progressivemauve-P1nsua/resolver-g74YjS' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [161 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2021-06-07-2001.25-F-2021-06-07-0801.16.pdiff [7212 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2021-06-07-2001.25-F-2021-06-07-0801.16.pdiff [5962 B] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2021-06-07-2001.25-F-2021-06-07-0801.16.pdiff [7212 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2021-06-07-2001.25-F-2021-06-07-0801.16.pdiff [5962 B] Get:6 http://debian.oregonstate.edu/debian unstable/main mips64el Packages [8332 kB] Fetched 8634 kB in 4s (2154 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'progressivemauve' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/progressivemauve.git Please use: git clone https://salsa.debian.org/med-team/progressivemauve.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 116 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main progressivemauve 1.2.0+4713+dfsg-5 (dsc) [2306 B] Get:2 http://debian.oregonstate.edu/debian unstable/main progressivemauve 1.2.0+4713+dfsg-5 (tar) [96.1 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main progressivemauve 1.2.0+4713+dfsg-5 (diff) [17.9 kB] Fetched 116 kB in 0s (7994 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/progressivemauve-P1nsua/progressivemauve-1.2.0+4713+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/progressivemauve-P1nsua' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), pkgconf, libboost-dev, libboost-system-dev, libboost-filesystem-dev, libboost-program-options-dev, libboost-iostreams-dev, libgenome-dev, libmuscle-dev, libmems-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el Filtered Build-Depends: debhelper-compat (= 13), pkgconf, libboost-dev, libboost-system-dev, libboost-filesystem-dev, libboost-program-options-dev, libboost-iostreams-dev, libgenome-dev, libmuscle-dev, libmems-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [458 B] Get:5 copy:/<>/apt_archive ./ Packages [549 B] Fetched 1964 B in 0s (83.9 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdextrautils build-essential cpp-10-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-10-base:mips64el gcc-10-cross-base-mipsen gcc-10-mips64el-linux-gnuabi64 gcc-10-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libboost-dev:mips64el libboost-filesystem-dev:mips64el libboost-filesystem1.74-dev:mips64el libboost-filesystem1.74.0:mips64el libboost-iostreams-dev:mips64el libboost-iostreams1.74-dev:mips64el libboost-iostreams1.74.0:mips64el libboost-program-options-dev:mips64el libboost-program-options1.74-dev:mips64el libboost-program-options1.74.0:mips64el libboost-regex1.74-dev:mips64el libboost-regex1.74.0:mips64el libboost-system-dev:mips64el libboost-system1.74-dev:mips64el libboost-system1.74.0:mips64el libboost1.74-dev:mips64el libbz2-1.0:mips64el libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libcom-err2:mips64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev:mips64el libgcc-10-dev-mips64el-cross libgcc-s1:mips64el libgcc-s1-mips64el-cross libgenome-dev:mips64el libgenome0:mips64el libgomp1:mips64el libgomp1-mips64el-cross libgssapi-krb5-2:mips64el libicu-dev:mips64el libicu67 libicu67:mips64el libio-string-perl libk5crypto3:mips64el libkeyutils1:mips64el libkrb5-3:mips64el libkrb5support0:mips64el liblocale-gettext-perl liblzma5:mips64el libmagic-mgc libmagic1 libmems-dev:mips64el libmems1:mips64el libmuscle-dev:mips64el libmuscle1:mips64el libnsl-dev libnsl-dev:mips64el libnsl2:mips64el libperl5.32 libpipeline1 libpkgconf3 libsigsegv2 libssl1.1:mips64el libstdc++-10-dev libstdc++-10-dev:mips64el libstdc++-10-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libtirpc-dev libtirpc-dev:mips64el libtirpc3:mips64el libtool libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:mips64el linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db perl perl-modules-5.32 pkgconf po-debconf sensible-utils ucf zlib1g:mips64el Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-10-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-10-multilib gcc-10-doc g++-10-multilib-mips64el-linux-gnuabi64 gcc-10-multilib-mips64el-linux-gnuabi64 manpages-dev flex bison gdb-mips64el-linux-gnuabi64 gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff libboost-doc:mips64el libboost1.74-doc:mips64el libboost-atomic1.74-dev:mips64el libboost-chrono1.74-dev:mips64el libboost-container1.74-dev:mips64el libboost-context1.74-dev:mips64el libboost-contract1.74-dev:mips64el libboost-coroutine1.74-dev:mips64el libboost-date-time1.74-dev:mips64el libboost-exception1.74-dev:mips64el libboost-fiber1.74-dev:mips64el libboost-graph1.74-dev:mips64el libboost-graph-parallel1.74-dev:mips64el libboost-locale1.74-dev:mips64el libboost-log1.74-dev:mips64el libboost-math1.74-dev:mips64el libboost-mpi1.74-dev:mips64el libboost-mpi-python1.74-dev:mips64el libboost-numpy1.74-dev:mips64el libboost-python1.74-dev:mips64el libboost-random1.74-dev:mips64el libboost-serialization1.74-dev:mips64el libboost-stacktrace1.74-dev:mips64el libboost-test1.74-dev:mips64el libboost-thread1.74-dev:mips64el libboost-timer1.74-dev:mips64el libboost-type-erasure1.74-dev:mips64el libboost-wave1.74-dev:mips64el libboost1.74-tools-dev:mips64el libmpfrc++-dev:mips64el libntl-dev:mips64el libboost-nowide1.74-dev:mips64el glibc-doc:mips64el libc-l10n:mips64el locales:mips64el glibc-doc manpages-dev:mips64el gnupg git bzr krb5-doc:mips64el krb5-user:mips64el icu-doc:mips64el libstdc++-10-doc libstdc++-10-doc:mips64el libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx libidn2-0:mips64el libnss-nis:mips64el libnss-nisplus:mips64el libfile-fcntllock-perl libarchive-cpio-perl krb5-locales:mips64el libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdextrautils build-essential cpp-10-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-10-base:mips64el gcc-10-cross-base-mipsen gcc-10-mips64el-linux-gnuabi64 gcc-10-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libboost-dev:mips64el libboost-filesystem-dev:mips64el libboost-filesystem1.74-dev:mips64el libboost-filesystem1.74.0:mips64el libboost-iostreams-dev:mips64el libboost-iostreams1.74-dev:mips64el libboost-iostreams1.74.0:mips64el libboost-program-options-dev:mips64el libboost-program-options1.74-dev:mips64el libboost-program-options1.74.0:mips64el libboost-regex1.74-dev:mips64el libboost-regex1.74.0:mips64el libboost-system-dev:mips64el libboost-system1.74-dev:mips64el libboost-system1.74.0:mips64el libboost1.74-dev:mips64el libbz2-1.0:mips64el libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libcom-err2:mips64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev:mips64el libgcc-10-dev-mips64el-cross libgcc-s1:mips64el libgcc-s1-mips64el-cross libgenome-dev:mips64el libgenome0:mips64el libgomp1:mips64el libgomp1-mips64el-cross libgssapi-krb5-2:mips64el libicu-dev:mips64el libicu67 libicu67:mips64el libio-string-perl libk5crypto3:mips64el libkeyutils1:mips64el libkrb5-3:mips64el libkrb5support0:mips64el liblocale-gettext-perl liblzma5:mips64el libmagic-mgc libmagic1 libmems-dev:mips64el libmems1:mips64el libmuscle-dev:mips64el libmuscle1:mips64el libnsl-dev libnsl-dev:mips64el libnsl2:mips64el libperl5.32 libpipeline1 libpkgconf3 libsigsegv2 libssl1.1:mips64el libstdc++-10-dev libstdc++-10-dev:mips64el libstdc++-10-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libtirpc-dev libtirpc-dev:mips64el libtirpc3:mips64el libtool libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:mips64el linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db perl perl-modules-5.32 pkgconf po-debconf sbuild-build-depends-main-dummy:mips64el sensible-utils ucf zlib1g:mips64el 0 upgraded, 134 newly installed, 0 to remove and 0 not upgraded. Need to get 129 MB of archives. After this operation, 663 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [976 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.36.1-7 [145 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-6 [936 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.32 all 5.32.1-4 [2823 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.32 amd64 5.32.1-4 [4117 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.32.1-4 [293 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4+b1 [19.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main mips64el gcc-10-base mips64el 10.2.1-6 [201 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.14 [14.8 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.39-3 [69.1 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.21-4 [175 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-5 [204 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-14 [313 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.3-2 [814 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.21-4 [510 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mips64el-linux-gnuabi64 amd64 2.35.2-2cross2 [2361 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.18-4 [104 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.3.1-1 [190 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.31-12 [2346 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev amd64 10.2.1-6 [1741 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10 amd64 10.2.1-6 [9380 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:10.2.1-1 [1644 B] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.9 [1537 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.9 [2153 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.9 [7704 B] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-mips64el-linux-gnuabi64-base amd64 10.2.1-6cross1 [202 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-10-mips64el-linux-gnuabi64 amd64 10.2.1-6cross1 [6982 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mips64el-linux-gnuabi64 amd64 4:10.2.0-1 [16.9 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.18+nmu1 [31.5 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base-mipsen all 10.2.1-6cross1 [197 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mips64el-cross all 2.31-11cross1 [1312 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-mips64el-cross all 10.2.1-6cross1 [69.9 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mips64el-cross all 10.2.1-6cross1 [88.3 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mips64el-cross all 10.2.1-6cross1 [7380 B] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-10-dev-mips64el-cross all 10.2.1-6cross1 [270 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-mips64el-linux-gnuabi64 amd64 10.2.1-6cross1 [13.6 MB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mips64el-linux-gnuabi64 amd64 4:10.2.0-1 [1480 B] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mips64el-cross all 10.2.1-6cross1 [392 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mips64el-cross all 5.10.28-1cross1 [1418 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mips64el-cross all 2.31-11cross1 [2204 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev-mips64el-cross all 10.2.1-6cross1 [1768 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10-mips64el-linux-gnuabi64 amd64 10.2.1-6cross1 [7656 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mips64el-linux-gnuabi64 amd64 4:10.2.0-1 [1192 B] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-6 [8625 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-6.7 [693 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2+b1 [337 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1.1 [19.0 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu1 [30.5 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.18+nmu1 [41.6 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mips64el all 12.9 [6740 B] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.3.4 [189 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-15 [513 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.183-3 [165 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.21-4 [1311 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.3.4 [1049 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 icu-devtools amd64 67.1-6 [201 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-s1 mips64el 10.2.1-6 [69.5 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt1 mips64el 1:4.4.18-4 [93.6 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main mips64el libc6 mips64el 2.31-12 [2546 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main mips64el libatomic1 mips64el 10.2.1-6 [7484 B] Get:87 http://debian.oregonstate.edu/debian unstable/main mips64el libgomp1 mips64el 10.2.1-6 [90.2 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-10-dev mips64el 10.2.1-6 [269 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++6 mips64el 10.2.1-6 [433 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main mips64el linux-libc-dev mips64el 5.10.40-1 [1342 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt-dev mips64el 1:4.4.18-4 [115 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main mips64el libcom-err2 mips64el 1.46.2-1 [73.8 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main mips64el libkrb5support0 mips64el 1.18.3-5 [63.3 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main mips64el libk5crypto3 mips64el 1.18.3-5 [120 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main mips64el libkeyutils1 mips64el 1.6.1-2 [15.0 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main mips64el libssl1.1 mips64el 1.1.1k-1 [1148 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main mips64el libkrb5-3 mips64el 1.18.3-5 [328 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main mips64el libgssapi-krb5-2 mips64el 1.18.3-5 [150 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main mips64el libtirpc3 mips64el 1.3.1-1 [74.0 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main mips64el libnsl2 mips64el 1.3.0-2 [35.5 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main mips64el libtirpc-dev mips64el 1.3.1-1 [199 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main mips64el libnsl-dev mips64el 1.3.0-2 [70.3 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main mips64el libc6-dev mips64el 2.31-12 [2204 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++-10-dev mips64el 10.2.1-6 [1775 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main mips64el libboost1.74-dev mips64el 1.74.0-9 [9534 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-dev mips64el 1.74.0.3 [4548 B] Get:107 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-filesystem1.74.0 mips64el 1.74.0-9 [279 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-system1.74.0 mips64el 1.74.0-9 [242 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-system1.74-dev mips64el 1.74.0-9 [243 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-filesystem1.74-dev mips64el 1.74.0-9 [310 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-filesystem-dev mips64el 1.74.0.3 [4368 B] Get:112 http://debian.oregonstate.edu/debian unstable/main mips64el libicu67 mips64el 67.1-6 [8500 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-regex1.74.0 mips64el 1.74.0-9 [477 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main mips64el libicu-dev mips64el 67.1-6 [9778 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-regex1.74-dev mips64el 1.74.0-9 [592 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main mips64el libbz2-1.0 mips64el 1.0.8-4 [47.5 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main mips64el liblzma5 mips64el 5.2.5-2 [166 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main mips64el libzstd1 mips64el 1.4.8+dfsg-2.1 [303 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main mips64el zlib1g mips64el 1:1.2.11.dfsg-2 [88.2 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-iostreams1.74.0 mips64el 1.74.0-9 [262 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-iostreams1.74-dev mips64el 1.74.0-9 [275 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-iostreams-dev mips64el 1.74.0.3 [4320 B] Get:123 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-program-options1.74.0 mips64el 1.74.0-9 [339 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-program-options1.74-dev mips64el 1.74.0-9 [400 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-program-options-dev mips64el 1.74.0.3 [4344 B] Get:126 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-system-dev mips64el 1.74.0.3 [4472 B] Get:127 http://debian.oregonstate.edu/debian unstable/main mips64el libgenome0 mips64el 1.3.11+svn20110227.4616-3 [104 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main mips64el libgenome-dev mips64el 1.3.11+svn20110227.4616-3 [200 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main mips64el libmuscle1 mips64el 3.7+4565-7 [235 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main mips64el libmems1 mips64el 1.6.0+4725-9+b1 [635 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main mips64el libmuscle-dev mips64el 3.7+4565-7 [342 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main mips64el libmems-dev mips64el 1.6.0+4725-9+b1 [1075 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main amd64 libpkgconf3 amd64 1.7.4~git20210206+dcf529b-3 [35.2 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main amd64 pkgconf amd64 1.7.4~git20210206+dcf529b-3 [41.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 129 MB in 1s (119 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10487 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.36.1-7_amd64.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../001-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-6_amd64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../003-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.4-2_amd64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package perl-modules-5.32. Preparing to unpack .../005-perl-modules-5.32_5.32.1-4_all.deb ... Unpacking perl-modules-5.32 (5.32.1-4) ... Selecting previously unselected package libperl5.32:amd64. Preparing to unpack .../006-libperl5.32_5.32.1-4_amd64.deb ... Unpacking libperl5.32:amd64 (5.32.1-4) ... Selecting previously unselected package perl. Preparing to unpack .../007-perl_5.32.1-4_amd64.deb ... Unpacking perl (5.32.1-4) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../008-liblocale-gettext-perl_1.07-4+b1_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b1) ... Selecting previously unselected package gcc-10-base:mips64el. Preparing to unpack .../009-gcc-10-base_10.2.1-6_mips64el.deb ... Unpacking gcc-10-base:mips64el (10.2.1-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../010-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../011-libmagic-mgc_1%3a5.39-3_amd64.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../012-libmagic1_1%3a5.39-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../013-file_1%3a5.39-3_amd64.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../014-gettext-base_0.21-4_amd64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package ucf. Preparing to unpack .../015-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../016-libsigsegv2_2.13-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../017-m4_1.4.18-5_amd64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../018-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../019-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../020-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../021-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package binutils-mips64el-linux-gnuabi64. Preparing to unpack .../022-binutils-mips64el-linux-gnuabi64_2.35.2-2cross2_amd64.deb ... Unpacking binutils-mips64el-linux-gnuabi64 (2.35.2-2cross2) ... Selecting previously unselected package libcrypt-dev:amd64. Preparing to unpack .../023-libcrypt-dev_1%3a4.4.18-4_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.18-4) ... Selecting previously unselected package libtirpc-dev:amd64. Preparing to unpack .../024-libtirpc-dev_1.3.1-1_amd64.deb ... Unpacking libtirpc-dev:amd64 (1.3.1-1) ... Selecting previously unselected package libnsl-dev:amd64. Preparing to unpack .../025-libnsl-dev_1.3.0-2_amd64.deb ... Unpacking libnsl-dev:amd64 (1.3.0-2) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../026-libc6-dev_2.31-12_amd64.deb ... Unpacking libc6-dev:amd64 (2.31-12) ... Selecting previously unselected package libstdc++-10-dev:amd64. Preparing to unpack .../027-libstdc++-10-dev_10.2.1-6_amd64.deb ... Unpacking libstdc++-10-dev:amd64 (10.2.1-6) ... Selecting previously unselected package g++-10. Preparing to unpack .../028-g++-10_10.2.1-6_amd64.deb ... Unpacking g++-10 (10.2.1-6) ... Selecting previously unselected package g++. Preparing to unpack .../029-g++_4%3a10.2.1-1_amd64.deb ... Unpacking g++ (4:10.2.1-1) ... Selecting previously unselected package libdpkg-perl. Preparing to unpack .../030-libdpkg-perl_1.20.9_all.deb ... Unpacking libdpkg-perl (1.20.9) ... Selecting previously unselected package dpkg-dev. Preparing to unpack .../031-dpkg-dev_1.20.9_all.deb ... Unpacking dpkg-dev (1.20.9) ... Selecting previously unselected package build-essential. Preparing to unpack .../032-build-essential_12.9_amd64.deb ... Unpacking build-essential (12.9) ... Selecting previously unselected package gcc-10-mips64el-linux-gnuabi64-base:amd64. Preparing to unpack .../033-gcc-10-mips64el-linux-gnuabi64-base_10.2.1-6cross1_amd64.deb ... Unpacking gcc-10-mips64el-linux-gnuabi64-base:amd64 (10.2.1-6cross1) ... Selecting previously unselected package cpp-10-mips64el-linux-gnuabi64. Preparing to unpack .../034-cpp-10-mips64el-linux-gnuabi64_10.2.1-6cross1_amd64.deb ... Unpacking cpp-10-mips64el-linux-gnuabi64 (10.2.1-6cross1) ... Selecting previously unselected package cpp-mips64el-linux-gnuabi64. Preparing to unpack .../035-cpp-mips64el-linux-gnuabi64_4%3a10.2.0-1_amd64.deb ... Unpacking cpp-mips64el-linux-gnuabi64 (4:10.2.0-1) ... Selecting previously unselected package cross-config. Preparing to unpack .../036-cross-config_2.6.18+nmu1_all.deb ... Unpacking cross-config (2.6.18+nmu1) ... Selecting previously unselected package gcc-10-cross-base-mipsen. Preparing to unpack .../037-gcc-10-cross-base-mipsen_10.2.1-6cross1_all.deb ... Unpacking gcc-10-cross-base-mipsen (10.2.1-6cross1) ... Selecting previously unselected package libc6-mips64el-cross. Preparing to unpack .../038-libc6-mips64el-cross_2.31-11cross1_all.deb ... Unpacking libc6-mips64el-cross (2.31-11cross1) ... Selecting previously unselected package libgcc-s1-mips64el-cross. Preparing to unpack .../039-libgcc-s1-mips64el-cross_10.2.1-6cross1_all.deb ... Unpacking libgcc-s1-mips64el-cross (10.2.1-6cross1) ... Selecting previously unselected package libgomp1-mips64el-cross. Preparing to unpack .../040-libgomp1-mips64el-cross_10.2.1-6cross1_all.deb ... Unpacking libgomp1-mips64el-cross (10.2.1-6cross1) ... Selecting previously unselected package libatomic1-mips64el-cross. Preparing to unpack .../041-libatomic1-mips64el-cross_10.2.1-6cross1_all.deb ... Unpacking libatomic1-mips64el-cross (10.2.1-6cross1) ... Selecting previously unselected package libgcc-10-dev-mips64el-cross. Preparing to unpack .../042-libgcc-10-dev-mips64el-cross_10.2.1-6cross1_all.deb ... Unpacking libgcc-10-dev-mips64el-cross (10.2.1-6cross1) ... Selecting previously unselected package gcc-10-mips64el-linux-gnuabi64. Preparing to unpack .../043-gcc-10-mips64el-linux-gnuabi64_10.2.1-6cross1_amd64.deb ... Unpacking gcc-10-mips64el-linux-gnuabi64 (10.2.1-6cross1) ... Selecting previously unselected package gcc-mips64el-linux-gnuabi64. Preparing to unpack .../044-gcc-mips64el-linux-gnuabi64_4%3a10.2.0-1_amd64.deb ... Unpacking gcc-mips64el-linux-gnuabi64 (4:10.2.0-1) ... Selecting previously unselected package libstdc++6-mips64el-cross. Preparing to unpack .../045-libstdc++6-mips64el-cross_10.2.1-6cross1_all.deb ... Unpacking libstdc++6-mips64el-cross (10.2.1-6cross1) ... Selecting previously unselected package linux-libc-dev-mips64el-cross. Preparing to unpack .../046-linux-libc-dev-mips64el-cross_5.10.28-1cross1_all.deb ... Unpacking linux-libc-dev-mips64el-cross (5.10.28-1cross1) ... Selecting previously unselected package libc6-dev-mips64el-cross. Preparing to unpack .../047-libc6-dev-mips64el-cross_2.31-11cross1_all.deb ... Unpacking libc6-dev-mips64el-cross (2.31-11cross1) ... Selecting previously unselected package libstdc++-10-dev-mips64el-cross. Preparing to unpack .../048-libstdc++-10-dev-mips64el-cross_10.2.1-6cross1_all.deb ... Unpacking libstdc++-10-dev-mips64el-cross (10.2.1-6cross1) ... Selecting previously unselected package g++-10-mips64el-linux-gnuabi64. Preparing to unpack .../049-g++-10-mips64el-linux-gnuabi64_10.2.1-6cross1_amd64.deb ... Unpacking g++-10-mips64el-linux-gnuabi64 (10.2.1-6cross1) ... Selecting previously unselected package g++-mips64el-linux-gnuabi64. Preparing to unpack .../050-g++-mips64el-linux-gnuabi64_4%3a10.2.0-1_amd64.deb ... Unpacking g++-mips64el-linux-gnuabi64 (4:10.2.0-1) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../051-libconfig-inifiles-perl_3.000003-1_all.deb ... Unpacking libconfig-inifiles-perl (3.000003-1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../052-libio-string-perl_1.08-3.1_all.deb ... Unpacking libio-string-perl (1.08-3.1) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../053-libicu67_67.1-6_amd64.deb ... Unpacking libicu67:amd64 (67.1-6) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../054-libxml2_2.9.10+dfsg-6.7_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-6.7) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../055-libxml-namespacesupport-perl_1.12-1.1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1.1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../056-libxml-sax-base-perl_1.09-1.1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1.1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../057-libxml-sax-perl_1.02+dfsg-1_all.deb ... Unpacking libxml-sax-perl (1.02+dfsg-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../058-libxml-libxml-perl_2.0134+dfsg-2+b1_amd64.deb ... Unpacking libxml-libxml-perl (2.0134+dfsg-2+b1) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../059-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../060-libyaml-perl_1.30-1_all.deb ... Unpacking libyaml-perl (1.30-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../061-libconfig-auto-perl_0.44-1.1_all.deb ... Unpacking libconfig-auto-perl (0.44-1.1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../062-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../063-libfile-homedir-perl_1.006-1_all.deb ... Unpacking libfile-homedir-perl (1.006-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../064-libdebian-dpkgcross-perl_2.6.18+nmu1_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.18+nmu1) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../065-dpkg-cross_2.6.18+nmu1_all.deb ... Unpacking dpkg-cross (2.6.18+nmu1) ... Selecting previously unselected package crossbuild-essential-mips64el. Preparing to unpack .../066-crossbuild-essential-mips64el_12.9_all.deb ... Unpacking crossbuild-essential-mips64el (12.9) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../067-libdebhelper-perl_13.3.4_all.deb ... Unpacking libdebhelper-perl (13.3.4) ... Selecting previously unselected package libtool. Preparing to unpack .../068-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../069-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../070-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../071-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... 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Setting up gcc-10-base:mips64el (10.2.1-6) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up cross-config (2.6.18+nmu1) ... Setting up libtirpc-dev:amd64 (1.3.1-1) ... Setting up libpkgconf3:amd64 (1.7.4~git20210206+dcf529b-3) ... Setting up gcc-10-cross-base-mipsen (10.2.1-6cross1) ... Setting up libsigsegv2:amd64 (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up icu-devtools (67.1-6) ... Setting up libperl5.32:amd64 (5.32.1-4) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up sensible-utils (0.0.14) ... Setting up libcrypt-dev:amd64 (1:4.4.18-4) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libc6-dev:amd64 (2.31-12) ... Setting up linux-libc-dev-mips64el-cross (5.10.28-1cross1) ... Setting up cpp-mips64el-linux-gnuabi64 (4:10.2.0-1) ... Setting up libgomp1-mips64el-cross (10.2.1-6cross1) ... Setting up libgcc-s1-mips64el-cross (10.2.1-6cross1) ... Setting up libelf1:amd64 (0.183-3) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.7) ... Setting up liblocale-gettext-perl (1.07-4+b1) ... Setting up gettext (0.21-4) ... Setting up libatomic1-mips64el-cross (10.2.1-6cross1) ... Setting up libstdc++-10-dev:amd64 (10.2.1-6) ... Setting up g++-10 (10.2.1-6) ... Setting up libtool (2.4.6-15) ... Setting up m4 (1.4.18-5) ... Setting up perl (5.32.1-4) ... Setting up libc6-dev-mips64el-cross (2.31-11cross1) ... Setting up libgcc-10-dev-mips64el-cross (10.2.1-6cross1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.9) ... Setting up autoconf (2.69-14) ... Setting up libstdc++6-mips64el-cross (10.2.1-6cross1) ... Setting up libstdc++-10-dev-mips64el-cross (10.2.1-6cross1) ... Setting up g++ (4:10.2.1-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.14-1) ... Setting up gcc-10-mips64el-linux-gnuabi64 (10.2.1-6cross1) ... Setting up groff-base (1.22.4-6) ... Setting up libsub-override-perl (0.09-2) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up g++-10-mips64el-linux-gnuabi64 (10.2.1-6cross1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libxml-namespacesupport-perl (1.12-1.1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.20.9) ... Setting up pkgconf (1.7.4~git20210206+dcf529b-3) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up dh-autoreconf (20) ... Setting up libxml-sax-base-perl (1.09-1.1) ... Setting up libio-string-perl (1.08-3.1) ... Setting up gcc-mips64el-linux-gnuabi64 (4:10.2.0-1) ... Setting up build-essential (12.9) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... 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Setting up libdebian-dpkgcross-perl (2.6.18+nmu1) ... Setting up dpkg-cross (2.6.18+nmu1) ... Setting up crossbuild-essential-mips64el (12.9) ... Setting up libcrypt1:mips64el (1:4.4.18-4) ... Setting up libgcc-s1:mips64el (10.2.1-6) ... Setting up libc6:mips64el (2.31-12) ... Setting up libcrypt-dev:mips64el (1:4.4.18-4) ... Setting up libbz2-1.0:mips64el (1.0.8-4) ... Setting up libstdc++6:mips64el (10.2.1-6) ... Setting up libzstd1:mips64el (1.4.8+dfsg-2.1) ... Setting up libkeyutils1:mips64el (1.6.1-2) ... Setting up libgenome0:mips64el (1.3.11+svn20110227.4616-3) ... Setting up liblzma5:mips64el (5.2.5-2) ... Setting up libicu67:mips64el (67.1-6) ... Setting up libgenome-dev:mips64el (1.3.11+svn20110227.4616-3) ... Setting up libboost-program-options1.74.0:mips64el (1.74.0-9) ... Setting up libssl1.1:mips64el (1.1.1k-1) ... Setting up libboost-filesystem1.74.0:mips64el (1.74.0-9) ... Setting up zlib1g:mips64el (1:1.2.11.dfsg-2) ... Setting up libcom-err2:mips64el (1.46.2-1) ... Setting up libgomp1:mips64el (10.2.1-6) ... Setting up libkrb5support0:mips64el (1.18.3-5) ... Setting up libboost-regex1.74.0:mips64el (1.74.0-9) ... Setting up libatomic1:mips64el (10.2.1-6) ... Setting up libk5crypto3:mips64el (1.18.3-5) ... Setting up libkrb5-3:mips64el (1.18.3-5) ... Setting up libmuscle1:mips64el (3.7+4565-7) ... Setting up libboost-iostreams1.74.0:mips64el (1.74.0-9) ... Setting up libgcc-10-dev:mips64el (10.2.1-6) ... Setting up libmems1:mips64el (1.6.0+4725-9+b1) ... Setting up libmuscle-dev:mips64el (3.7+4565-7) ... Setting up libgssapi-krb5-2:mips64el (1.18.3-5) ... Setting up libtirpc3:mips64el (1.3.1-1) ... Setting up libtirpc-dev:mips64el (1.3.1-1) ... Setting up libnsl2:mips64el (1.3.0-2) ... Setting up libnsl-dev:mips64el (1.3.0-2) ... Setting up libc6-dev:mips64el (2.31-12) ... Setting up libicu-dev:mips64el (67.1-6) ... Setting up libstdc++-10-dev:mips64el (10.2.1-6) ... Setting up libboost1.74-dev:mips64el (1.74.0-9) ... Setting up libboost-program-options1.74-dev:mips64el (1.74.0-9) ... Setting up libboost-program-options-dev:mips64el (1.74.0.3) ... Setting up libboost-system1.74-dev:mips64el (1.74.0-9) ... Setting up libboost-regex1.74-dev:mips64el (1.74.0-9) ... Setting up libboost-dev:mips64el (1.74.0.3) ... Setting up libboost-filesystem1.74-dev:mips64el (1.74.0-9) ... Setting up libboost-filesystem-dev:mips64el (1.74.0.3) ... Setting up libboost-system-dev:mips64el (1.74.0.3) ... Setting up libboost-iostreams1.74-dev:mips64el (1.74.0-9) ... Setting up libmems-dev:mips64el (1.6.0+4725-9+b1) ... Setting up libboost-iostreams-dev:mips64el (1.74.0.3) ... Setting up sbuild-build-depends-main-dummy:mips64el (0.invalid.0) ... Processing triggers for libc-bin (2.31-12) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mips64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-16-amd64 #1 SMP Debian 4.19.181-1 (2021-03-19) amd64 (x86_64) Toolchain package versions: binutils_2.35.2-2 dpkg-dev_1.20.9 g++-10_10.2.1-6 gcc-10_10.2.1-6 libc6-dev_2.31-12 libstdc++-10-dev_10.2.1-6 libstdc++-10-dev-mips64el-cross_10.2.1-6cross1 libstdc++6_10.2.1-6 libstdc++6-mips64el-cross_10.2.1-6cross1 linux-libc-dev_5.10.40-1 Package versions: adduser_3.118 apt_2.2.3 autoconf_2.69-14 automake_1:1.16.3-2 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_11.1 base-passwd_3.5.50 bash_5.1-3 binutils_2.35.2-2 binutils-common_2.35.2-2 binutils-mips64el-linux-gnuabi64_2.35.2-2cross2 binutils-x86-64-linux-gnu_2.35.2-2 bsdextrautils_2.36.1-7 bsdutils_1:2.36.1-7 build-essential_12.9 bzip2_1.0.8-4 coreutils_8.32-4+b1 cpp_4:10.2.1-1 cpp-10_10.2.1-6 cpp-10-mips64el-linux-gnuabi64_10.2.1-6cross1 cpp-8_8.4.0-7 cpp-mips64el-linux-gnuabi64_4:10.2.0-1 cross-config_2.6.18+nmu1 crossbuild-essential-mips64el_12.9 dash_0.5.11+git20210120+802ebd4-1 debconf_1.5.76 debhelper_13.3.4 debian-archive-keyring_2021.1.1 debianutils_4.11.2 dh-autoreconf_20 dh-strip-nondeterminism_1.12.0-1 diffutils_1:3.7-5 dpkg_1.20.9 dpkg-cross_2.6.18+nmu1 dpkg-dev_1.20.9 dwz_0.14-1 e2fsprogs_1.46.2-1 fakeroot_1.25.3-1.1 fdisk_2.36.1-7 file_1:5.39-3 findutils_4.8.0-1 g++_4:10.2.1-1 g++-10_10.2.1-6 g++-10-mips64el-linux-gnuabi64_10.2.1-6cross1 g++-mips64el-linux-gnuabi64_4:10.2.0-1 gcc_4:10.2.1-1 gcc-10_10.2.1-6 gcc-10-base_10.2.1-6 gcc-10-cross-base-mipsen_10.2.1-6cross1 gcc-10-mips64el-linux-gnuabi64_10.2.1-6cross1 gcc-10-mips64el-linux-gnuabi64-base_10.2.1-6cross1 gcc-8-base_8.4.0-7 gcc-9-base_9.4.0-1 gcc-mips64el-linux-gnuabi64_4:10.2.0-1 gettext_0.21-4 gettext-base_0.21-4 gpgv_2.2.27-2 grep_3.6-1 groff-base_1.22.4-6 gzip_1.10-4 hostname_3.23 icu-devtools_67.1-6 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-10 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.2.3 libarchive-zip-perl_1.68-1 libasan5_9.4.0-1 libasan6_10.2.1-6 libatomic1_10.2.1-6 libatomic1-mips64el-cross_10.2.1-6cross1 libattr1_1:2.4.48-6 libaudit-common_1:3.0-2 libaudit1_1:3.0-2 libbinutils_2.35.2-2 libblkid1_2.36.1-7 libboost-dev_1.74.0.3 libboost-filesystem-dev_1.74.0.3 libboost-filesystem1.74-dev_1.74.0-9 libboost-filesystem1.74.0_1.74.0-9 libboost-iostreams-dev_1.74.0.3 libboost-iostreams1.74-dev_1.74.0-9 libboost-iostreams1.74.0_1.74.0-9 libboost-program-options-dev_1.74.0.3 libboost-program-options1.74-dev_1.74.0-9 libboost-program-options1.74.0_1.74.0-9 libboost-regex1.74-dev_1.74.0-9 libboost-regex1.74.0_1.74.0-9 libboost-system-dev_1.74.0.3 libboost-system1.74-dev_1.74.0-9 libboost-system1.74.0_1.74.0-9 libboost1.74-dev_1.74.0-9 libbz2-1.0_1.0.8-4 libc-bin_2.31-12 libc-dev-bin_2.31-12 libc6_2.31-12 libc6-dev_2.31-12 libc6-dev-mips64el-cross_2.31-11cross1 libc6-mips64el-cross_2.31-11cross1 libcap-ng0_0.7.9-2.2+b1 libcc1-0_10.2.1-6 libcom-err2_1.46.2-1 libconfig-auto-perl_0.44-1.1 libconfig-inifiles-perl_3.000003-1 libcrypt-dev_1:4.4.18-4 libcrypt1_1:4.4.18-4 libctf-nobfd0_2.35.2-2 libctf0_2.35.2-2 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.259 libdebhelper-perl_13.3.4 libdebian-dpkgcross-perl_2.6.18+nmu1 libdpkg-perl_1.20.9 libelf1_0.183-3 libext2fs2_1.46.2-1 libfakeroot_1.25.3-1.1 libfdisk1_2.36.1-7 libffi6_3.2.1-9 libffi7_3.3-6 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.12.0-1 libfile-which-perl_1.23-1 libgcc-10-dev_10.2.1-6 libgcc-10-dev-mips64el-cross_10.2.1-6cross1 libgcc-s1_10.2.1-6 libgcc-s1-mips64el-cross_10.2.1-6cross1 libgcrypt20_1.8.7-6 libgdbm-compat4_1.19-2 libgdbm6_1.19-2 libgenome-dev_1.3.11+svn20110227.4616-3 libgenome0_1.3.11+svn20110227.4616-3 libgmp10_2:6.2.1+dfsg-1 libgnutls30_3.7.1-5 libgomp1_10.2.1-6 libgomp1-mips64el-cross_10.2.1-6cross1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.18.3-5 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.7.2-3 libicu-dev_67.1-6 libicu67_67.1-6 libidn2-0_2.3.0-5 libio-string-perl_1.08-3.1 libisl19_0.20-2 libisl23_0.23-1 libitm1_10.2.1-6 libk5crypto3_1.18.3-5 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-5 libkrb5support0_1.18.3-5 liblocale-gettext-perl_1.07-4+b1 liblsan0_10.2.1-6 liblz4-1_1.9.3-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmems-dev_1.6.0+4725-9+b1 libmems1_1.6.0+4725-9+b1 libmount1_2.36.1-7 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libmpx2_8.4.0-7 libmuscle-dev_3.7+4565-7 libmuscle1_3.7+4565-7 libncursesw6_6.2+20201114-2 libnettle6_3.5.1+really3.4.1-1 libnettle8_3.7.2-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.23.22-1 libpam-modules_1.4.0-7 libpam-modules-bin_1.4.0-7 libpam-runtime_1.4.0-7 libpam0g_1.4.0-7 libpcre2-8-0_10.36-2 libpcre3_2:8.39-13 libperl5.28_5.28.1-6 libperl5.32_5.32.1-4 libpipeline1_1.5.3-1 libpkgconf3_1.7.4~git20210206+dcf529b-3 libquadmath0_10.2.1-6 libseccomp2_2.5.1-1 libselinux1_3.1-3 libsemanage-common_3.1-1 libsemanage1_3.1-1+b2 libsepol1_3.1-1 libsigsegv2_2.13-1 libsmartcols1_2.36.1-7 libss2_1.46.2-1 libssl1.1_1.1.1k-1 libstdc++-10-dev_10.2.1-6 libstdc++-10-dev-mips64el-cross_10.2.1-6cross1 libstdc++6_10.2.1-6 libstdc++6-mips64el-cross_10.2.1-6cross1 libsub-override-perl_0.09-2 libsystemd0_247.3-5 libtasn1-6_4.16.0-2 libtinfo6_6.2+20201114-2 libtirpc-common_1.3.1-1 libtirpc-dev_1.3.1-1 libtirpc3_1.3.1-1 libtool_2.4.6-15 libtsan0_10.2.1-6 libubsan1_10.2.1-6 libuchardet0_0.0.7-1 libudev1_247.3-5 libunistring2_0.9.10-4 libuuid1_2.36.1-7 libxml-libxml-perl_2.0134+dfsg-2+b1 libxml-namespacesupport-perl_1.12-1.1 libxml-sax-base-perl_1.09-1.1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-6.7 libxxhash0_0.8.0-2 libyaml-perl_1.30-1 libzstd1_1.4.8+dfsg-2.1 linux-libc-dev_5.10.40-1 linux-libc-dev-mips64el-cross_5.10.28-1cross1 login_1:4.8.1-1 logsave_1.46.2-1 lsb-base_11.1.0 m4_1.4.18-5 make_4.3-4.1 man-db_2.9.4-2 mawk_1.3.4.20200120-2 mount_2.36.1-7 ncurses-base_6.2+20201114-2 ncurses-bin_6.2+20201114-2 passwd_1:4.8.1-1 patch_2.7.6-7 perl_5.32.1-4 perl-base_5.32.1-4 perl-modules-5.28_5.28.1-6 perl-modules-5.32_5.32.1-4 pkgconf_1.7.4~git20210206+dcf529b-3 po-debconf_1.0.21+nmu1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.14 sysvinit-utils_2.96-7 tar_1.34+dfsg-1 tzdata_2021a-1 ucf_3.0043 util-linux_2.36.1-7 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: progressivemauve Binary: progressivemauve Architecture: any Version: 1.2.0+4713+dfsg-5 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://darlinglab.org/mauve/user-guide/mauvealigner.html Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/progressivemauve Vcs-Git: https://salsa.debian.org/med-team/progressivemauve.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), pkgconf, libboost-dev, libboost-system-dev, libboost-filesystem-dev, libboost-program-options-dev, libboost-iostreams-dev, libgenome-dev, libmuscle-dev, libmems-dev Package-List: progressivemauve deb science optional arch=any Checksums-Sha1: 3b09d613f64fa9237d8c0566c02823136a253208 96084 progressivemauve_1.2.0+4713+dfsg.orig.tar.xz 5e9df9e187c44ab12a59092bb61aae5751cba848 17944 progressivemauve_1.2.0+4713+dfsg-5.debian.tar.xz Checksums-Sha256: e5f43b4e5af5d6ddb6d4bac91a919d0d2706ff42f51a4209d2d15be8a12c3772 96084 progressivemauve_1.2.0+4713+dfsg.orig.tar.xz 2cf77a36474fb18bfb2e7d4ef9153cd0f4db9c3d9f38ca4790a1bdb636170b91 17944 progressivemauve_1.2.0+4713+dfsg-5.debian.tar.xz Files: b9f9a0377aeccaa353cc4a491452003a 96084 progressivemauve_1.2.0+4713+dfsg.orig.tar.xz 7aa58d54810bbc9e520ad251273a9fa6 17944 progressivemauve_1.2.0+4713+dfsg-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl/GozMRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtERgQ//RUDAb1wMwYkBg/gCWMmgHTm7x0uBKM58 YPsTbMNpvTknr4z5sLwUSHpZhFiJ6LdNjL7lzfY6xU2Z3F/bwbPKVgLkj/SPb7eY bLA2d/+QAwYdm22WVnvAlpDDerPVrLFFX3bOB6IMthdLlV+yfMEOUUKeyRGouJo3 vWWa5IT47M5PZW0TpeqUf3/mMg3LWH0k2hIAtR4e0bWVfBdbatSJZpPjAj+QKnj0 1qMwN9vy2EIihRSgC7viqUKcbzR8eRFUIyXZULYPRQm5aAYpdE4CU2WWVmkkhS2H AMXYEy5pimfS2NMllVE6GHaGnejgudVZYVxsix9a8yO+HGPTqJYFiZfU6INWzN74 CVITsB0HeiSVsiVb2LAJysr24/8D6uqwgEJPHAA6ICBQa2JYbRDJacKlzMzcJ3TM p9HdZjkDJ3qdZVEhEgHTTSe3BrBcybmeQfo1EIU3sdSCIrDuQnPfYBk8zSfsKqd1 ddMIJqlB2dtgKvc1vd5n1WibVPz92FpQ+W7CZ2izCUqcicghn2OKPFFN8IlyAhBu zyHwQDAoEIc1iLZeNTQwoztifjNDx8U/n+7nyPP+CrVIM3pKaLQU/Cn1U0fNfprv ur1G0HfknpRlJ+LoFYdDwwFeWfiX7p07Tuj7MTnkTI7E7thfzYOTjpLtiMrWxiOR ziwuQhTQYl4= =FUT7 -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.JCjKy1V3/trustedkeys.kbx': General error gpgv: Signature made Tue Dec 1 20:10:27 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./progressivemauve_1.2.0+4713+dfsg-5.dsc dpkg-source: info: extracting progressivemauve in /<> dpkg-source: info: unpacking progressivemauve_1.2.0+4713+dfsg.orig.tar.xz dpkg-source: info: unpacking progressivemauve_1.2.0+4713+dfsg-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_build.patch dpkg-source: info: applying do_not_build_static_binaries.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying use-native-getopt.patch dpkg-source: info: applying adapt-to-unversioned-libs.patch dpkg-source: info: applying fix_FTBFS_boost1.67.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mips64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-0f8e9b64-be8d-47e5-bd9a-0aa4511cd731 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -amips64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package progressivemauve dpkg-buildpackage: info: source version 1.2.0+4713+dfsg-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type mips64el-linux-gnuabi64 does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mips64el debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a configure.ac:21: installing 'config/compile' configure.ac:9: installing 'config/config.guess' configure.ac:9: installing 'config/config.sub' configure.ac:11: installing 'config/install-sh' configure.ac:11: installing 'config/missing' Makefile.am: installing './INSTALL' src/Makefile.am:12: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') src/Makefile.am: installing 'config/depcomp' src/Makefile.am:51: warning: variable 'EXTRA_mauveStatic_SOURCES' is defined but no program or src/Makefile.am:51: library has 'mauveStatic' as canonical name (possible typo) src/Makefile.am:49: warning: variable 'mauveStatic_SOURCES' is defined but no program or src/Makefile.am:49: library has 'mauveStatic' as canonical name (possible typo) src/Makefile.am:160: warning: variable 'progressiveMauveStatic_SOURCES' is defined but no program or src/Makefile.am:160: library has 'progressiveMauveStatic' as canonical name (possible typo) src/Makefile.am:50: warning: variable 'mauveStatic_LDADD' is defined but no program or src/Makefile.am:50: library has 'mauveStatic' as canonical name (possible typo) src/Makefile.am:161: warning: variable 'progressiveMauveStatic_LDADD' is defined but no program or src/Makefile.am:161: library has 'progressiveMauveStatic' as canonical name (possible typo) src/Makefile.am:52: warning: variable 'mauveStatic_DEPENDENCIES' is defined but no program or src/Makefile.am:52: library has 'mauveStatic' as canonical name (possible typo) dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/mips64el-linux-gnuabi64 --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=mips64el-linux-gnuabi64 configure: loading site script /etc/dpkg-cross/cross-config.mips64el checking build system type... x86_64-pc-linux-gnu checking host system type... mips64el-unknown-linux-gnuabi64 checking target system type... mips64el-unknown-linux-gnuabi64 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for mips64el-linux-gnuabi64-strip... mips64el-linux-gnuabi64-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for mips64el-linux-gnuabi64-gcc... mips64el-linux-gnuabi64-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether mips64el-linux-gnuabi64-gcc accepts -g... yes checking for mips64el-linux-gnuabi64-gcc option to accept ISO C89... none needed checking whether mips64el-linux-gnuabi64-gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of mips64el-linux-gnuabi64-gcc... none checking for mips64el-linux-gnuabi64-g++... mips64el-linux-gnuabi64-g++ checking whether we are using the GNU C++ compiler... yes checking whether mips64el-linux-gnuabi64-g++ accepts -g... yes checking dependency style of mips64el-linux-gnuabi64-g++... none checking whether ln -s works... yes checking how to run the C preprocessor... mips64el-linux-gnuabi64-gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for getopt_long... yes checking for getopt... yes checking for mips64el-linux-gnuabi64-pkg-config... /usr/bin/mips64el-linux-gnuabi64-pkg-config checking pkg-config is at least version 0.9.0... yes checking for DEPS... yes checking for an ANSI C-conforming const... yes checking for inline... inline checking whether time.h and sys/time.h may both be included... yes checking for memset... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking libintl.h usability... yes checking libintl.h presence... yes checking for libintl.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking wchar.h usability... yes checking wchar.h presence... yes checking for wchar.h... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... (cached) yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for size_t... yes checking whether mips64el-linux-gnuabi64-gcc needs -traditional... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/config.h config.status: executing depfiles commands dh_auto_build -a make -j1 make[1]: Entering directory '/<>' Making all in src make[2]: Entering directory '/<>/src' make all-am make[3]: Entering directory '/<>/src' mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mauveAligner.o mauveAligner.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/10/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from mauveAligner.cpp:30: /usr/mips64el-linux-gnuabi64/include/c++/10/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] 32 | #warning \ | ^~~~~~~ mauveAligner.cpp:413:48: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 413 | cerr << "mauveAligner " << " build date " << __DATE__ << " at " << __TIME__ << endl; | ^~~~~~~~ mauveAligner.cpp:413:70: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 413 | cerr << "mauveAligner " << " build date " << __DATE__ << " at " << __TIME__ << endl; | ^~~~~~~~ mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -Wl,-z,relro -Wl,-z,now -o mauveAligner mauveAligner.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scoreAlignment.o scoreAlignment.cpp mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o scoreAlignment scoreAlignment.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o uniqueMerCount.o uniqueMerCount.cpp mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o uniqueMerCount uniqueMerCount.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o toRawSequence.o toRawSequence.cpp mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o toRawSequence toRawSequence.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mfa2xmfa.o mfa2xmfa.cpp mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o mfa2xmfa mfa2xmfa.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o addUnalignedIntervals.o addUnalignedIntervals.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/10/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from addUnalignedIntervals.cpp:2: /usr/mips64el-linux-gnuabi64/include/c++/10/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] 32 | #warning \ | ^~~~~~~ mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o addUnalignedIntervals addUnalignedIntervals.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o toMultiFastA.o toMultiFastA.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/10/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from toMultiFastA.cpp:2: /usr/mips64el-linux-gnuabi64/include/c++/10/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] 32 | #warning \ | ^~~~~~~ mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o toMultiFastA toMultiFastA.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o getAlignmentWindows.o getAlignmentWindows.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/10/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from getAlignmentWindows.cpp:14: /usr/mips64el-linux-gnuabi64/include/c++/10/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] 32 | #warning \ | ^~~~~~~ mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o getAlignmentWindows getAlignmentWindows.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o uniquifyTrees.o uniquifyTrees.cpp mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o uniquifyTrees uniquifyTrees.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o toGrimmFormat.o toGrimmFormat.cpp mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o toGrimmFormat toGrimmFormat.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mauveToXMFA.o mauveToXMFA.cpp mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o mauveToXMFA mauveToXMFA.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o stripGapColumns.o stripGapColumns.cpp mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o stripGapColumns stripGapColumns.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o progressiveMauve.o progressiveMauve.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/10/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from progressiveMauve.cpp:26: /usr/mips64el-linux-gnuabi64/include/c++/10/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] 32 | #warning \ | ^~~~~~~ progressiveMauve.cpp:417:52: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 417 | cerr << "progressiveMauve " << " build date " << __DATE__ << " at " << __TIME__ << endl; | ^~~~~~~~ progressiveMauve.cpp:417:74: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 417 | cerr << "progressiveMauve " << " build date " << __DATE__ << " at " << __TIME__ << endl; | ^~~~~~~~ mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o UniqueMatchFinder.o UniqueMatchFinder.cpp mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o progressiveMauve progressiveMauve.o UniqueMatchFinder.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o extractBCITrees.o extractBCITrees.cpp mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o extractBCITrees extractBCITrees.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o createBackboneMFA.o createBackboneMFA.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/10/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from createBackboneMFA.cpp:2: /usr/mips64el-linux-gnuabi64/include/c++/10/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] 32 | #warning \ | ^~~~~~~ mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o createBackboneMFA createBackboneMFA.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o repeatoire.o repeatoire.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/10/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from repeatoire.cpp:4: /usr/mips64el-linux-gnuabi64/include/c++/10/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] 32 | #warning \ | ^~~~~~~ mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o repeatoire repeatoire.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o alignmentProjector.o alignmentProjector.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/10/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from /usr/include/libMems/ProgressiveAligner.h:21, from alignmentProjector.cpp:18: /usr/mips64el-linux-gnuabi64/include/c++/10/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] 32 | #warning \ | ^~~~~~~ mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o alignmentProjector alignmentProjector.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o stripSubsetLCBs.o stripSubsetLCBs.cpp mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o stripSubsetLCBs stripSubsetLCBs.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o projectAndStrip.o projectAndStrip.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/10/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from projectAndStrip.cpp:18: /usr/mips64el-linux-gnuabi64/include/c++/10/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] 32 | #warning \ | ^~~~~~~ projectAndStrip.cpp: In function ‘int main(int, char**)’: projectAndStrip.cpp:65:60: warning: conversion from ‘long unsigned int’ to ‘__gnu_cxx::__alloc_traits, unsigned int>::value_type’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 65 | not_ids[seq_ids[i]] = (std::numeric_limits::max)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o projectAndStrip projectAndStrip.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o makeBadgerMatrix.o makeBadgerMatrix.cpp mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o makeBadgerMatrix makeBadgerMatrix.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o randomGeneSample.o randomGeneSample.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/10/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from randomGeneSample.cpp:18: /usr/mips64el-linux-gnuabi64/include/c++/10/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] 32 | #warning \ | ^~~~~~~ mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o randomGeneSample randomGeneSample.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o getOrthologList.o getOrthologList.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/10/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from getOrthologList.cpp:18: /usr/mips64el-linux-gnuabi64/include/c++/10/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] 32 | #warning \ | ^~~~~~~ mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o getOrthologList getOrthologList.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o bbFilter.o bbFilter.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/10/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from /usr/include/libMems/Backbone.h:24, from bbFilter.cpp:1: /usr/mips64el-linux-gnuabi64/include/c++/10/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] 32 | #warning \ | ^~~~~~~ mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o bbFilter bbFilter.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o bbAnalyze.o bbAnalyze.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/10/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from /usr/include/libMems/Backbone.h:24, from bbAnalyze.cpp:4: /usr/mips64el-linux-gnuabi64/include/c++/10/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] 32 | #warning \ | ^~~~~~~ mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o bbAnalyze bbAnalyze.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o backbone_global_to_local.o backbone_global_to_local.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/10/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from /usr/include/libMems/Backbone.h:24, from backbone_global_to_local.cpp:2: /usr/mips64el-linux-gnuabi64/include/c++/10/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] 32 | #warning \ | ^~~~~~~ mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o backbone_global_to_local backbone_global_to_local.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o xmfa2maf.o xmfa2maf.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/10/ext/hash_map:60, from /usr/include/libMems/HomologyHMM/dptables.h:43, from /usr/include/libMems/HomologyHMM/homology.h:27, from /usr/include/libMems/Islands.h:25, from /usr/include/libMems/ProgressiveAligner.h:21, from xmfa2maf.cpp:2: /usr/mips64el-linux-gnuabi64/include/c++/10/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] 32 | #warning \ | ^~~~~~~ mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o xmfa2maf xmfa2maf.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE mips64el-linux-gnuabi64-g++ -DHAVE_CONFIG_H -I. -I/usr/include/libMems -I/usr/include/libGenome -I/usr/include/libMUSCLE -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o coordinateTranslate.o coordinateTranslate.cpp mips64el-linux-gnuabi64-g++ -O2 -funroll-loops -fomit-frame-pointer -ftree-vectorize -DCOMMAND_LINE -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -Wl,-z,relro -Wl,-z,now -o coordinateTranslate coordinateTranslate.o -L/usr/lib/mips64el-linux-gnuabi64 -lMems -lboost_system -lboost_filesystem -lboost_program_options -lboost_iostreams -lrt -lpthread -lGenome -lMUSCLE make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/progressivemauve-1.2.0\+4713\+dfsg/debian/progressivemauve AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in src make[2]: Entering directory '/<>/src' make[3]: Entering directory '/<>/src' /bin/mkdir -p '/<>/debian/progressivemauve/usr/bin' /usr/bin/install -c mauveAligner scoreAlignment uniqueMerCount toRawSequence mfa2xmfa addUnalignedIntervals toMultiFastA getAlignmentWindows uniquifyTrees toGrimmFormat mauveToXMFA stripGapColumns progressiveMauve extractBCITrees createBackboneMFA repeatoire alignmentProjector stripSubsetLCBs projectAndStrip makeBadgerMatrix randomGeneSample getOrthologList bbFilter bbAnalyze backbone_global_to_local xmfa2maf coordinateTranslate '/<>/debian/progressivemauve/usr/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a -a dh_strip -a -a dh_makeshlibs -a -a dh_shlibdeps -a -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'progressivemauve' in '../progressivemauve_1.2.0+4713+dfsg-5_mips64el.deb'. dpkg-deb: building package 'progressivemauve-dbgsym' in '../progressivemauve-dbgsym_1.2.0+4713+dfsg-5_mips64el.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../progressivemauve_1.2.0+4713+dfsg-5_mips64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2021-06-08T00:41:10Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ progressivemauve_1.2.0+4713+dfsg-5_mips64el.changes: ---------------------------------------------------- Format: 1.8 Date: Mon, 30 Nov 2020 17:33:02 +0100 Source: progressivemauve Binary: progressivemauve progressivemauve-dbgsym Built-For-Profiles: cross nocheck Architecture: mips64el Version: 1.2.0+4713+dfsg-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: progressivemauve - multiple genome alignment algorithms Changes: progressivemauve (1.2.0+4713+dfsg-5) unstable; urgency=medium . * Standards-Version: 4.5.1 (routine-update) * debhelper-compat 13 (routine-update) * Remove trailing whitespace in debian/changelog (routine-update) * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Trim trailing whitespace. * Use secure URI in Homepage field. 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progressivemauve_1.2.0+4713+dfsg-5_mips64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Tue, 08 Jun 2021 00:41:10 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-14), automake (= 1:1.16.3-2), autopoint (= 0.21-4), autotools-dev (= 20180224.1+nmu1), base-files (= 11.1), base-passwd (= 3.5.50), bash (= 5.1-3), binutils (= 2.35.2-2), binutils-common (= 2.35.2-2), binutils-x86-64-linux-gnu (= 2.35.2-2), bsdextrautils (= 2.36.1-7), bsdutils (= 1:2.36.1-7), build-essential (= 12.9), bzip2 (= 1.0.8-4), coreutils (= 8.32-4+b1), cpp (= 4:10.2.1-1), cpp-10 (= 10.2.1-6), dash (= 0.5.11+git20210120+802ebd4-1), debconf (= 1.5.76), debhelper (= 13.3.4), debianutils (= 4.11.2), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.12.0-1), diffutils (= 1:3.7-5), dpkg (= 1.20.9), dpkg-dev (= 1.20.9), dwz (= 0.14-1), file (= 1:5.39-3), findutils (= 4.8.0-1), g++ (= 4:10.2.1-1), g++-10 (= 10.2.1-6), gcc (= 4:10.2.1-1), gcc-10 (= 10.2.1-6), gcc-10-base (= 10.2.1-6), 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Version: 1.2.0+4713+dfsg-5 Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 6126 Depends: libboost-filesystem1.74.0 (>= 1.74.0), libboost-iostreams1.74.0 (>= 1.74.0), libboost-program-options1.74.0 (>= 1.74.0), libc6 (>= 2.29), libgcc-s1 (>= 3.4), libgenome0 (>= 1.3.11+svn20110227.4616), libmems1 (>= 1.6.0+4725), libstdc++6 (>= 9) Enhances: mauve-aligner Section: science Priority: optional Homepage: https://darlinglab.org/mauve/user-guide/mauvealigner.html Description: multiple genome alignment algorithms The mauveAligner and progressiveMauve alignment algorithms have been implemented as command-line programs included with the downloadable Mauve software. When run from the command-line, these programs provide options not yet available in the graphical interface. . Mauve is a system for efficiently constructing multiple genome alignments in the presence of large-scale evolutionary events such as rearrangement and inversion. Multiple genome alignment provides a basis for research into comparative genomics and the study of evolutionary dynamics. Aligning whole genomes is a fundamentally different problem than aligning short sequences. . Mauve has been developed with the idea that a multiple genome aligner should require only modest computational resources. It employs algorithmic techniques that scale well in the amount of sequence being aligned. For example, a pair of Y. pestis genomes can be aligned in under a minute, while a group of 9 divergent Enterobacterial genomes can be aligned in a few hours. . Mauve computes and interactively visualizes genome sequence comparisons. Using FastA or GenBank sequence data, Mauve constructs multiple genome alignments that identify large-scale rearrangement, gene gain, gene loss, indels, and nucleotide substutition. . Mauve is developed at the University of Wisconsin. drwxr-xr-x root/root 0 2020-11-30 16:33 ./ drwxr-xr-x root/root 0 2020-11-30 16:33 ./usr/ drwxr-xr-x root/root 0 2020-11-30 16:33 ./usr/bin/ -rwxr-xr-x root/root 208192 2020-11-30 16:33 ./usr/bin/addUnalignedIntervals -rwxr-xr-x root/root 293216 2020-11-30 16:33 ./usr/bin/alignmentProjector -rwxr-xr-x root/root 208256 2020-11-30 16:33 ./usr/bin/backbone_global_to_local -rwxr-xr-x root/root 472696 2020-11-30 16:33 ./usr/bin/bbAnalyze -rwxr-xr-x root/root 144048 2020-11-30 16:33 ./usr/bin/bbFilter -rwxr-xr-x root/root 199848 2020-11-30 16:33 ./usr/bin/coordinateTranslate -rwxr-xr-x root/root 199920 2020-11-30 16:33 ./usr/bin/createBackboneMFA -rwxr-xr-x root/root 112160 2020-11-30 16:33 ./usr/bin/extractBCITrees -rwxr-xr-x root/root 237576 2020-11-30 16:33 ./usr/bin/getAlignmentWindows -rwxr-xr-x root/root 301032 2020-11-30 16:33 ./usr/bin/getOrthologList -rwxr-xr-x root/root 208256 2020-11-30 16:33 ./usr/bin/makeBadgerMatrix -rwxr-xr-x root/root 297976 2020-11-30 16:33 ./usr/bin/mauveAligner -rwxr-xr-x root/root 199944 2020-11-30 16:33 ./usr/bin/mauveToXMFA -rwxr-xr-x root/root 28880 2020-11-30 16:33 ./usr/bin/mfa2xmfa -rwxr-xr-x root/root 424552 2020-11-30 16:33 ./usr/bin/progressiveMauve -rwxr-xr-x root/root 254504 2020-11-30 16:33 ./usr/bin/projectAndStrip -rwxr-xr-x root/root 275576 2020-11-30 16:33 ./usr/bin/randomGeneSample -rwxr-xr-x root/root 743352 2020-11-30 16:33 ./usr/bin/repeatoire -rwxr-xr-x root/root 216608 2020-11-30 16:33 ./usr/bin/scoreAlignment -rwxr-xr-x root/root 216440 2020-11-30 16:33 ./usr/bin/stripGapColumns -rwxr-xr-x root/root 224984 2020-11-30 16:33 ./usr/bin/stripSubsetLCBs -rwxr-xr-x root/root 199936 2020-11-30 16:33 ./usr/bin/toGrimmFormat -rwxr-xr-x root/root 199992 2020-11-30 16:33 ./usr/bin/toMultiFastA -rwxr-xr-x root/root 20400 2020-11-30 16:33 ./usr/bin/toRawSequence -rwxr-xr-x root/root 20352 2020-11-30 16:33 ./usr/bin/uniqueMerCount -rwxr-xr-x root/root 78888 2020-11-30 16:33 ./usr/bin/uniquifyTrees -rwxr-xr-x root/root 212440 2020-11-30 16:33 ./usr/bin/xmfa2maf drwxr-xr-x root/root 0 2020-11-30 16:33 ./usr/share/ drwxr-xr-x root/root 0 2020-11-30 16:33 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-11-30 16:33 ./usr/share/doc/progressivemauve/ -rw-r--r-- root/root 261 2020-11-30 16:33 ./usr/share/doc/progressivemauve/README.test -rw-r--r-- root/root 982 2020-11-30 16:33 ./usr/share/doc/progressivemauve/changelog.Debian.gz -rw-r--r-- root/root 776 2020-11-30 16:33 ./usr/share/doc/progressivemauve/copyright -rw-r--r-- root/root 1280 2020-11-30 16:33 ./usr/share/doc/progressivemauve/run-unit-test drwxr-xr-x root/root 0 2020-11-30 16:33 ./usr/share/doc/progressivemauve/test_data/ -rw-r--r-- root/root 2203 2020-11-30 16:33 ./usr/share/doc/progressivemauve/test_data/all_virii.fasta.gz -rw-r--r-- root/root 2848 2020-11-30 16:33 ./usr/share/doc/progressivemauve/test_data/genome_1.gbk.gz -rw-r--r-- root/root 2879 2020-11-30 16:33 ./usr/share/doc/progressivemauve/test_data/genome_2.gbk.gz -rw-r--r-- root/root 2878 2020-11-30 16:33 ./usr/share/doc/progressivemauve/test_data/genome_3.gbk.gz drwxr-xr-x root/root 0 2020-11-30 16:33 ./usr/share/man/ drwxr-xr-x root/root 0 2020-11-30 16:33 ./usr/share/man/man1/ -rw-r--r-- root/root 1122 2020-11-30 16:33 ./usr/share/man/man1/addUnalignedIntervals.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/alignmentProjector.1.gz -> addUnalignedIntervals.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/backbone_global_to_local.1.gz -> addUnalignedIntervals.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/bbAnalyze.1.gz -> addUnalignedIntervals.1.gz -rw-r--r-- root/root 515 2020-11-30 16:33 ./usr/share/man/man1/bbFilter.1.gz -rw-r--r-- root/root 373 2020-11-30 16:33 ./usr/share/man/man1/coordinateTranslate.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/createBackboneMFA.1.gz -> addUnalignedIntervals.1.gz -rw-r--r-- root/root 525 2020-11-30 16:33 ./usr/share/man/man1/extractBCITrees.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/getAlignmentWindows.1.gz -> addUnalignedIntervals.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/getOrthologList.1.gz -> addUnalignedIntervals.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/makeBadgerMatrix.1.gz -> addUnalignedIntervals.1.gz -rw-r--r-- root/root 1516 2020-11-30 16:33 ./usr/share/man/man1/mauveAligner.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/mauveToXMFA.1.gz -> addUnalignedIntervals.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/mfa2xmfa.1.gz -> addUnalignedIntervals.1.gz -rw-r--r-- root/root 1987 2020-11-30 16:33 ./usr/share/man/man1/progressiveMauve.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/projectAndStrip.1.gz -> addUnalignedIntervals.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/randomGeneSample.1.gz -> addUnalignedIntervals.1.gz -rw-r--r-- root/root 919 2020-11-30 16:33 ./usr/share/man/man1/repeatoire.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/scoreAlignment.1.gz -> addUnalignedIntervals.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/stripGapColumns.1.gz -> addUnalignedIntervals.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/stripSubsetLCBs.1.gz -> addUnalignedIntervals.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/toGrimmFormat.1.gz -> addUnalignedIntervals.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/toMultiFastA.1.gz -> addUnalignedIntervals.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/toRawSequence.1.gz -> addUnalignedIntervals.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/uniqueMerCount.1.gz -> addUnalignedIntervals.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/uniquifyTrees.1.gz -> addUnalignedIntervals.1.gz lrwxrwxrwx root/root 0 2020-11-30 16:33 ./usr/share/man/man1/xmfa2maf.1.gz -> addUnalignedIntervals.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [592 B] Get:5 copy:/<>/apt_archive ./ Packages [679 B] Fetched 2234 B in 0s (102 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common sbuild-build-depends-lintian-dummy:mips64el t1utils unzip 0 upgraded, 90 newly installed, 0 to remove and 0 not upgraded. Need to get 7627 kB of archives. After this operation, 21.7 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [856 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.1-2 [73.8 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.1-2 [168 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.64-1 [36.6 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.4-1 [51.1 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.27-2 [547 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.34.1-3 [797 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.27-2 [927 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libaliased-perl all 0.34-1.1 [14.1 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.40 [72.2 kB] Get:11 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libpackage-stash-perl all 0.39-1 [21.9 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b3 [12.0 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1+b1 [13.8 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.118-1 [53.5 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-gzip-perl amd64 0.19-1+b7 [17.4 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libproc-processtable-perl amd64 0.59-2+b1 [45.9 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.018+ds-1+b1 [99.3 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.018+ds-1+b1 [103 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-4+b8 [8724 B] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.12-1+b1 [13.0 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.8-1+b1 [197 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b3 [75.8 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.012002-1 [351 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b2 [20.3 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 5.08-1 [90.6 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.82+repack-1+b1 [35.8 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.22-3 [88.5 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-26 [171 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.104.0 [1265 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7627 kB in 0s (33.8 MB/s) Selecting previously unselected package readline-common. (Reading database ... 36357 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.1-2_all.deb ... Unpacking readline-common (8.1-2) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.1-2_amd64.deb ... Unpacking libreadline8:amd64 (8.1-2) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.64-1_amd64.deb ... Unpacking diffstat (1.64-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.4-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.4-1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../04-gpgconf_2.2.27-2_amd64.deb ... Unpacking gpgconf (2.2.27-2) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../05-libsqlite3-0_3.34.1-3_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.34.1-3) ... Selecting previously unselected package gpg. 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Setting up liblist-moreutils-xs-perl (0.430-2) ... Setting up libparams-util-perl (1.102-1+b1) ... Setting up libtime-duration-perl (1.21-1) ... Setting up libtext-xslate-perl (3.5.8-1+b1) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libsub-name-perl (0.26-1+b1) ... Setting up libdata-validate-domain-perl (0.10-1.1) ... Setting up libproc-processtable-perl (0.59-2+b1) ... Setting up libpath-tiny-perl (0.118-1) ... Setting up lzop (1.04-2) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libipc-run3-perl (0.048-2) ... Setting up libaliased-perl (0.34-1.1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libdevel-stacktrace-perl (2.0400-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b7) ... Setting up libexporter-tiny-perl (1.002002-1) ... Setting up libfont-ttf-perl (1.06-1.1) ... Setting up libtext-levenshteinxs-perl (0.03-4+b8) ... Setting up libperlio-gzip-perl (0.19-1+b7) ... Setting up readline-common (8.1-2) ... Setting up libhtml-html5-entities-perl (0.004-1.1) ... Setting up libsereal-decoder-perl (4.018+ds-1+b1) ... Setting up libmarkdown2:amd64 (2.2.6-1) ... Setting up liburi-perl (5.08-1) ... Setting up libemail-address-xs-perl (1.04-1+b3) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libreadline8:amd64 (8.1-2) ... Setting up libtype-tiny-perl (1.012002-1) ... Setting up libtext-markdown-discount-perl:amd64 (0.12-1+b1) ... Setting up libexception-class-perl (1.44-1) ... Setting up libdevel-callchecker-perl (0.008-1+b2) ... Setting up libdata-optlist-perl (0.110-1.1) ... Setting up gpgconf (2.2.27-2) ... Setting up gpg (2.2.27-2) ... Setting up libsub-exporter-perl (0.987-1) ... Setting up libiterator-perl (0.03+ds1-1.1) ... Setting up libiterator-util-perl (0.02+ds1-1.1) ... Setting up libparams-classify-perl (0.015-1+b3) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-1.1) ... Setting up libpackage-stash-perl (0.39-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.004004-1) ... Setting up libmoox-aliases-perl (0.001006-1.1) ... Setting up libb-hooks-endofscope-perl (0.24-1.1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.104.0) ... Setting up sbuild-build-depends-lintian-dummy:mips64el (0.invalid.0) ... Processing triggers for man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.31-12) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 335216 Build-Time: 395 Distribution: unstable Foreign Architectures: mips64el Host Architecture: mips64el Install-Time: 25 Job: progressivemauve_1.2.0+4713+dfsg-5 Lintian: pass Machine Architecture: amd64 Package: progressivemauve Package-Time: 432 Source-Version: 1.2.0+4713+dfsg-5 Space: 335216 Status: successful Version: 1.2.0+4713+dfsg-5 -------------------------------------------------------------------------------- Finished at 2021-06-08T00:41:10Z Build needed 00:07:12, 335216k disk space