sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | proteinortho 6.0.15+dfsg-1 (mips64el) Mon, 06 Apr 2020 00:35:30 +0000 | +==============================================================================+ Package: proteinortho Version: 6.0.15+dfsg-1 Source Version: 6.0.15+dfsg-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: mips64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-048ba2b2-01df-42ab-aa3d-c32083062884' with '<>' I: NOTICE: Log filtering will replace 'build/proteinortho-UCavFU/resolver-6yOc5P' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-04-05-0803.52.pdiff [5752 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-04-05-1401.23.pdiff [14.8 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-04-05-2001.20.pdiff [58.4 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-04-05-0803.52.pdiff [6023 B] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-04-05-2001.20.pdiff [58.4 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-04-05-1401.23.pdiff [10.5 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-04-05-2001.20.pdiff [29.6 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-04-05-2001.20.pdiff [29.6 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main mips64el Packages [7898 kB] Fetched 8225 kB in 1s (5540 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'proteinortho' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/proteinortho.git Please use: git clone https://salsa.debian.org/med-team/proteinortho.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 442 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main proteinortho 6.0.15+dfsg-1 (dsc) [2119 B] Get:2 http://debian.oregonstate.edu/debian unstable/main proteinortho 6.0.15+dfsg-1 (tar) [432 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main proteinortho 6.0.15+dfsg-1 (diff) [7676 B] Fetched 442 kB in 0s (28.9 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/proteinortho-UCavFU/proteinortho-6.0.15+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/proteinortho-UCavFU' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), ncbi-blast+, liblapack-dev | libatlas-base-dev | liblapack.so, diamond-aligner, procps, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el Filtered Build-Depends: debhelper-compat (= 12), ncbi-blast+, liblapack-dev, diamond-aligner, procps, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [457 B] Get:5 copy:/<>/apt_archive ./ Packages [525 B] Fetched 1939 B in 0s (76.6 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdmainutils build-essential cpp-9-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el debhelper dh-autoreconf dh-strip-nondeterminism diamond-aligner:mips64el dpkg-cross dwz file g++ g++-9 g++-9-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-10-base:mips64el gcc-10-cross-base-mipsen gcc-8-base:mips64el gcc-9-cross-base-mipsen gcc-9-mips64el-linux-gnuabi64 gcc-9-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libblas-dev:mips64el libblas3:mips64el libbsd0 libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libdebhelper-perl libdebian-dpkgcross-perl libelf1 libexpat1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-8-dev:mips64el libgcc-9-dev-mips64el-cross libgcc-s1:mips64el libgcc-s1-mips64el-cross libgfortran5:mips64el libglib2.0-0 libgomp1:mips64el libgomp1-mips64el-cross libicu63 libio-string-perl liblapack-dev:mips64el liblapack3:mips64el liblmdb0 liblocale-gettext-perl libmagic-mgc libmagic1 libmbedcrypto3 libmbedtls12 libmbedx509-0 libmpdec2 libncurses6 libpipeline1 libprocps8 libpython3-stdlib libpython3.8-minimal libpython3.8-stdlib libreadline8 libsigsegv2 libsqlite3-0 libssl1.1 libstdc++-8-dev:mips64el libstdc++-9-dev libstdc++-9-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libtool libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db mime-support ncbi-blast+ ncbi-data po-debconf procps python3 python3-minimal python3.8 python3.8-minimal readline-common sensible-utils ucf zlib1g:mips64el Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican | wordlist whois vacation gcc-9-locales cpp-doc dh-make binutils-multiarch g++-multilib g++-9-multilib gcc-9-doc g++-9-multilib-mips64el-linux-gnuabi64 gcc-9-multilib-mips64el-linux-gnuabi64 manpages-dev flex bison gdb-mips64el-linux-gnuabi64 gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff liblapack-doc:mips64el glibc-doc:mips64el libc-l10n:mips64el locales:mips64el glibc-doc manpages-dev:mips64el libstdc++-8-doc:mips64el libstdc++-9-doc libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python3.8-venv python3.8-doc binfmt-support readline-doc Recommended packages: med-config:mips64el curl | wget | lynx libidn2-0:mips64el libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpm2 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdmainutils build-essential cpp-9-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el debhelper dh-autoreconf dh-strip-nondeterminism diamond-aligner:mips64el dpkg-cross dwz file g++ g++-9 g++-9-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-10-base:mips64el gcc-10-cross-base-mipsen gcc-8-base:mips64el gcc-9-cross-base-mipsen gcc-9-mips64el-linux-gnuabi64 gcc-9-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libblas-dev:mips64el libblas3:mips64el libbsd0 libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libdebhelper-perl libdebian-dpkgcross-perl libelf1 libexpat1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-8-dev:mips64el libgcc-9-dev-mips64el-cross libgcc-s1:mips64el libgcc-s1-mips64el-cross libgfortran5:mips64el libglib2.0-0 libgomp1:mips64el libgomp1-mips64el-cross libicu63 libio-string-perl liblapack-dev:mips64el liblapack3:mips64el liblmdb0 liblocale-gettext-perl libmagic-mgc libmagic1 libmbedcrypto3 libmbedtls12 libmbedx509-0 libmpdec2 libncurses6 libpipeline1 libprocps8 libpython3-stdlib libpython3.8-minimal libpython3.8-stdlib libreadline8 libsigsegv2 libsqlite3-0 libssl1.1 libstdc++-8-dev:mips64el libstdc++-9-dev libstdc++-9-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libtool libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db mime-support ncbi-blast+ ncbi-data po-debconf procps python3 python3-minimal python3.8 python3.8-minimal readline-common sbuild-build-depends-main-dummy:mips64el sensible-utils ucf zlib1g:mips64el 0 upgraded, 120 newly installed, 0 to remove and 0 not upgraded. Need to get 105 MB of archives. After this operation, 457 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [952 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-4 [919 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.2-2 [33.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.1-1 [1308 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1f-1 [1543 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.8-minimal amd64 3.8.2-1+b1 [751 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.2.9-1 [94.3 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 python3.8-minimal amd64 3.8.2-1+b1 [1941 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 python3-minimal amd64 3.8.2-2 [37.5 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 mime-support all 3.64 [37.8 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmpdec2 amd64 2.4.2-3 [84.1 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-4 [72.5 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-4 [160 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.31.1-4 [661 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.8-stdlib amd64 3.8.2-1+b1 [1666 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 python3.8 amd64 3.8.2-1+b1 [410 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3-stdlib amd64 3.8.2-2 [20.7 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 python3 amd64 3.8.2-2 [62.6 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main mips64el gcc-10-base mips64el 10-20200402-1 [196 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.2-1 [102 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libprocps8 amd64 2:3.3.16-4 [62.7 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 procps amd64 2:3.3.16-4 [262 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-4 [262 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-4 [120 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-4 [67.9 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mips64el-linux-gnuabi64 amd64 2.34-5cross6 [2310 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.16-1 [104 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.30-4 [2629 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev amd64 9.3.0-10 [1699 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9 amd64 9.3.0-10 [10.7 MB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:9.2.1-3.1 [1644 B] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-mips64el-linux-gnuabi64-base amd64 9.3.0-8cross1 [196 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-mips64el-linux-gnuabi64 amd64 9.3.0-8cross1 [6468 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mips64el-linux-gnuabi64 amd64 4:9.2.1-4.1 [16.7 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base-mipsen all 9.3.0-8cross1 [192 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base-mipsen all 10-20200324-1cross1 [192 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mips64el-cross all 2.30-2cross1 [1327 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-mips64el-cross all 10-20200324-1cross1 [69.8 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mips64el-cross all 10-20200324-1cross1 [87.5 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mips64el-cross all 10-20200324-1cross1 [7388 B] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-mips64el-cross all 9.3.0-8cross1 [248 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-mips64el-linux-gnuabi64 amd64 9.3.0-8cross1 [6825 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mips64el-linux-gnuabi64 amd64 4:9.2.1-4.1 [1484 B] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mips64el-cross all 10-20200324-1cross1 [393 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mips64el-cross all 5.4.19-1cross1 [1166 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mips64el-cross all 2.30-2cross1 [2476 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-mips64el-cross all 9.3.0-8cross1 [1726 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-mips64el-linux-gnuabi64 amd64 9.3.0-8cross1 [7050 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mips64el-linux-gnuabi64 amd64 4:9.2.1-4.1 [1192 B] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000002-1 [52.0 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-3 [8296 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-4 [709 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mips64el all 12.8 [6704 B] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 12.10 [184 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.6.3-2 [23.7 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.6.3-2 [14.7 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.64.1-1 [1341 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.10 [1003 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-s1 mips64el 10-20200402-1 [69.4 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt1 mips64el 1:4.4.16-1 [95.5 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main mips64el libc6 mips64el 2.30-4 [2552 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++6 mips64el 10-20200402-1 [433 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main mips64el zlib1g mips64el 1:1.2.11.dfsg-2 [88.2 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main mips64el diamond-aligner mips64el 0.9.31-1 [498 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main mips64el gcc-8-base mips64el 8.4.0-3 [194 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main mips64el libatomic1 mips64el 10-20200402-1 [7528 B] Get:104 http://debian.oregonstate.edu/debian unstable/main mips64el libblas3 mips64el 3.9.0-2 [109 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main mips64el libblas-dev mips64el 3.9.0-2 [126 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main mips64el linux-libc-dev mips64el 5.5.13-2 [1079 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt-dev mips64el 1:4.4.16-1 [118 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main mips64el libc6-dev mips64el 2.30-4 [2477 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main mips64el libgomp1 mips64el 10-20200402-1 [89.4 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-8-dev mips64el 8.4.0-3 [234 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main mips64el libgfortran5 mips64el 10-20200402-1 [306 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main mips64el liblapack3 mips64el 3.9.0-2 [1530 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main mips64el liblapack-dev mips64el 3.9.0-2 [3669 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main amd64 liblmdb0 amd64 0.9.24-1 [45.0 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main amd64 libmbedcrypto3 amd64 2.16.5-1 [214 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main amd64 libmbedx509-0 amd64 2.16.5-1 [105 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main amd64 libmbedtls12 amd64 2.16.5-1 [134 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++-8-dev mips64el 8.4.0-3 [1582 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main amd64 ncbi-data all 6.1.20170106+dfsg1-8 [3552 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main amd64 ncbi-blast+ amd64 2.9.0-4 [11.2 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 105 MB in 1s (115 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 12626 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-4_amd64.deb ... Unpacking groff-base (1.22.4-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.2-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.2-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.9.1-1_amd64.deb ... Unpacking man-db (2.9.1-1) ... 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Setting up libexpat1:amd64 (2.2.9-1) ... Setting up python3.8-minimal (3.8.2-1+b1) ... Selecting previously unselected package python3-minimal. (Reading database ... 13597 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.8.2-2_amd64.deb ... Unpacking python3-minimal (3.8.2-2) ... Selecting previously unselected package mime-support. Preparing to unpack .../1-mime-support_3.64_all.deb ... Unpacking mime-support (3.64) ... Selecting previously unselected package libmpdec2:amd64. Preparing to unpack .../2-libmpdec2_2.4.2-3_amd64.deb ... Unpacking libmpdec2:amd64 (2.4.2-3) ... Selecting previously unselected package readline-common. Preparing to unpack .../3-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../4-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package libsqlite3-0:amd64. 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Selecting previously unselected package libstdc++-8-dev:mips64el. Preparing to unpack .../96-libstdc++-8-dev_8.4.0-3_mips64el.deb ... Unpacking libstdc++-8-dev:mips64el (8.4.0-3) ... Selecting previously unselected package ncbi-data. Preparing to unpack .../97-ncbi-data_6.1.20170106+dfsg1-8_all.deb ... Unpacking ncbi-data (6.1.20170106+dfsg1-8) ... Selecting previously unselected package ncbi-blast+. Preparing to unpack .../98-ncbi-blast+_2.9.0-4_amd64.deb ... Unpacking ncbi-blast+ (2.9.0-4) ... Selecting previously unselected package sbuild-build-depends-main-dummy:mips64el. Preparing to unpack .../99-sbuild-build-depends-main-dummy_0.invalid.0_mips64el.deb ... Unpacking sbuild-build-depends-main-dummy:mips64el (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000002-1) ... Setting up libpipeline1:amd64 (1.5.2-2) ... Setting up liblmdb0:amd64 (0.9.24-1) ... Setting up ncbi-data (6.1.20170106+dfsg1-8) ... Setting up libfile-which-perl (1.23-1) ... Setting up mime-support (3.64) ... Setting up libmagic-mgc (1:5.38-4) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:amd64 (2.64.1-1) ... No schema files found: doing nothing. Setting up libdebhelper-perl (12.10) ... Setting up libsqlite3-0:amd64 (3.31.1-4) ... Setting up libmagic1:amd64 (1:5.38-4) ... Setting up gcc-9-mips64el-linux-gnuabi64-base:amd64 (9.3.0-8cross1) ... Setting up linux-libc-dev:mips64el (5.5.13-2) ... Setting up libc6-mips64el-cross (2.30-2cross1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.38-4) ... Setting up gcc-9-cross-base-mipsen (9.3.0-8cross1) ... Setting up libyaml-perl (1.30-1) ... Setting up binutils-mips64el-linux-gnuabi64 (2.34-5cross6) ... Setting up libicu63:amd64 (63.2-3) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up gcc-10-base:mips64el (10-20200402-1) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3) ... Setting up gcc-10-cross-base-mipsen (10-20200324-1cross1) ... Setting up libncurses6:amd64 (6.2-1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up gcc-8-base:mips64el (8.4.0-3) ... Setting up autopoint (0.19.8.1-10) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.16-1) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libmbedcrypto3:amd64 (2.16.5-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libc6-dev:amd64 (2.30-4) ... Setting up linux-libc-dev-mips64el-cross (5.4.19-1cross1) ... Setting up cpp-9-mips64el-linux-gnuabi64 (9.3.0-8cross1) ... Setting up libmpdec2:amd64 (2.4.2-3) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up cpp-mips64el-linux-gnuabi64 (4:9.2.1-4.1) ... Setting up libgomp1-mips64el-cross (10-20200324-1cross1) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libgcc-s1-mips64el-cross (10-20200324-1cross1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up readline-common (8.0-4) ... Setting up libxml2:amd64 (2.9.10+dfsg-4) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up libprocps8:amd64 (2:3.3.16-4) ... Setting up libfile-stripnondeterminism-perl (1.6.3-2) ... Setting up libatomic1-mips64el-cross (10-20200324-1cross1) ... Setting up libstdc++-9-dev:amd64 (9.3.0-10) ... Setting up libtool (2.4.6-14) ... Setting up libmbedx509-0:amd64 (2.16.5-1) ... Setting up libreadline8:amd64 (8.0-4) ... Setting up libmbedtls12:amd64 (2.16.5-1) ... Setting up m4 (1.4.18-4) ... Setting up libc6-dev-mips64el-cross (2.30-2cross1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0038+nmu1) ... Setting up g++-9 (9.3.0-10) ... Setting up autoconf (2.69-11.1) ... Setting up libstdc++6-mips64el-cross (10-20200324-1cross1) ... Setting up dh-strip-nondeterminism (1.6.3-2) ... Setting up g++ (4:9.2.1-3.1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4) ... Setting up procps (2:3.3.16-4) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode Setting up libgcc-9-dev-mips64el-cross (9.3.0-8cross1) ... Setting up build-essential (12.8) ... Setting up libpython3.8-stdlib:amd64 (3.8.2-1+b1) ... Setting up python3.8 (3.8.2-1+b1) ... Setting up libpython3-stdlib:amd64 (3.8.2-2) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10) ... Setting up libstdc++-9-dev-mips64el-cross (9.3.0-8cross1) ... Setting up python3 (3.8.2-2) ... Setting up man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-9-mips64el-linux-gnuabi64 (9.3.0-8cross1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up ncbi-blast+ (2.9.0-4) ... Setting up gcc-mips64el-linux-gnuabi64 (4:9.2.1-4.1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-9-mips64el-linux-gnuabi64 (9.3.0-8cross1) ... Setting up po-debconf (1.0.21) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-mips64el-linux-gnuabi64 (4:9.2.1-4.1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-mips64el (12.8) ... Setting up libcrypt1:mips64el (1:4.4.16-1) ... Setting up libgcc-s1:mips64el (10-20200402-1) ... Setting up dh-autoreconf (19) ... Setting up libc6:mips64el (2.30-4) ... Setting up libcrypt-dev:mips64el (1:4.4.16-1) ... Setting up libc6-dev:mips64el (2.30-4) ... Setting up libstdc++6:mips64el (10-20200402-1) ... Setting up debhelper (12.10) ... Setting up zlib1g:mips64el (1:1.2.11.dfsg-2) ... Setting up libgomp1:mips64el (10-20200402-1) ... Setting up diamond-aligner:mips64el (0.9.31-1) ... Setting up libblas3:mips64el (3.9.0-2) ... update-alternatives: using /usr/lib/mips64el-linux-gnuabi64/blas/libblas.so.3 to provide /usr/lib/mips64el-linux-gnuabi64/libblas.so.3 (libblas.so.3-mips64el-linux-gnuabi64) in auto mode Setting up libatomic1:mips64el (10-20200402-1) ... Setting up libgcc-8-dev:mips64el (8.4.0-3) ... Setting up libgfortran5:mips64el (10-20200402-1) ... Setting up libblas-dev:mips64el (3.9.0-2) ... update-alternatives: using /usr/lib/mips64el-linux-gnuabi64/blas/libblas.so to provide /usr/lib/mips64el-linux-gnuabi64/libblas.so (libblas.so-mips64el-linux-gnuabi64) in auto mode Setting up libstdc++-8-dev:mips64el (8.4.0-3) ... Setting up liblapack3:mips64el (3.9.0-2) ... update-alternatives: using /usr/lib/mips64el-linux-gnuabi64/lapack/liblapack.so.3 to provide /usr/lib/mips64el-linux-gnuabi64/liblapack.so.3 (liblapack.so.3-mips64el-linux-gnuabi64) in auto mode Setting up liblapack-dev:mips64el (3.9.0-2) ... update-alternatives: using /usr/lib/mips64el-linux-gnuabi64/lapack/liblapack.so to provide /usr/lib/mips64el-linux-gnuabi64/liblapack.so (liblapack.so-mips64el-linux-gnuabi64) in auto mode Setting up sbuild-build-depends-main-dummy:mips64el (0.invalid.0) ... Processing triggers for libc-bin (2.30-4) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mips64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-6-amd64 #1 SMP Debian 4.19.67-2+deb10u2 (2019-11-11) amd64 (x86_64) Toolchain package versions: binutils_2.34-5 dpkg-dev_1.19.7 g++-9_9.3.0-10 gcc-9_9.3.0-10 libc6-dev_2.30-4 libstdc++-8-dev_8.4.0-3 libstdc++-9-dev_9.3.0-10 libstdc++-9-dev-mips64el-cross_9.3.0-8cross1 libstdc++6_10-20200402-1 libstdc++6-mips64el-cross_10-20200324-1cross1 linux-libc-dev_5.5.13-2 Package versions: adduser_3.118 apt_2.0.1 autoconf_2.69-11.1 automake_1:1.16.1-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-5 binutils-common_2.34-5 binutils-mips64el-linux-gnuabi64_2.34-5cross6 binutils-x86-64-linux-gnu_2.34-5 bsdmainutils_11.1.2+b1 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 coreutils_8.30-3+b1 cpp_4:9.2.1-3.1 cpp-8_8.4.0-3 cpp-9_9.3.0-10 cpp-9-mips64el-linux-gnuabi64_9.3.0-8cross1 cpp-mips64el-linux-gnuabi64_4:9.2.1-4.1 cross-config_2.6.15-3 crossbuild-essential-mips64el_12.8 dash_0.5.10.2-7 debconf_1.5.73 debhelper_12.10 debian-archive-keyring_2019.1 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.6.3-2 diamond-aligner_0.9.31-1 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.38-4 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-9_9.3.0-10 g++-9-mips64el-linux-gnuabi64_9.3.0-8cross1 g++-mips64el-linux-gnuabi64_4:9.2.1-4.1 gcc_4:9.2.1-3.1 gcc-10-base_10-20200402-1 gcc-10-cross-base-mipsen_10-20200324-1cross1 gcc-8-base_8.4.0-3 gcc-9_9.3.0-10 gcc-9-base_9.3.0-10 gcc-9-cross-base-mipsen_9.3.0-8cross1 gcc-9-mips64el-linux-gnuabi64_9.3.0-8cross1 gcc-9-mips64el-linux-gnuabi64-base_9.3.0-8cross1 gcc-mips64el-linux-gnuabi64_4:9.2.1-4.1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-4 gzip_1.10-2 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-6 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.0.1 libarchive-zip-perl_1.68-1 libasan5_9.3.0-10 libatomic1_10-20200402-1 libatomic1-mips64el-cross_10-20200324-1cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3 libbinutils_2.34-5 libblas-dev_3.9.0-2 libblas3_3.9.0-2 libblkid1_2.34-0.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.30-4 libc-dev-bin_2.30-4 libc6_2.30-4 libc6-dev_2.30-4 libc6-dev-mips64el-cross_2.30-2cross1 libc6-mips64el-cross_2.30-2cross1 libcap-ng0_0.7.9-2.1+b2 libcc1-0_10-20200402-1 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000002-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libctf-nobfd0_2.34-5 libctf0_2.34-5 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.251 libdebhelper-perl_12.10 libdebian-dpkgcross-perl_2.6.15-3 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libexpat1_2.2.9-1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi6_3.2.1-9 libffi7_3.3-4 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.6.3-2 libfile-which-perl_1.23-1 libgcc-8-dev_8.4.0-3 libgcc-9-dev_9.3.0-10 libgcc-9-dev-mips64el-cross_9.3.0-8cross1 libgcc-s1_10-20200402-1 libgcc-s1-mips64el-cross_10-20200324-1cross1 libgcc1_1:10-20200402-1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran5_10-20200402-1 libglib2.0-0_2.64.1-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.13-2 libgomp1_10-20200402-1 libgomp1-mips64el-cross_10-20200324-1cross1 libgpg-error0_1.37-1 libhogweed4_3.5.1+really3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libicu63_63.2-3 libidn2-0_2.3.0-1 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 libitm1_10-20200402-1 liblapack-dev_3.9.0-2 liblapack3_3.9.0-2 liblmdb0_0.9.24-1 liblocale-gettext-perl_1.07-4 liblsan0_10-20200402-1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmbedcrypto3_2.16.5-1 libmbedtls12_2.16.5-1 libmbedx509-0_2.16.5-1 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpdec2_2.4.2-3 libmpfr6_4.0.2-1 libmpx2_8.4.0-3 libncurses6_6.2-1 libncursesw6_6.2-1 libnettle6_3.5.1+really3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libp11-kit0_0.23.20-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12+b1 libperl5.28_5.28.1-6 libperl5.30_5.30.0-9 libpipeline1_1.5.2-2 libprocps8_2:3.3.16-4 libpython3-stdlib_3.8.2-2 libpython3.8-minimal_3.8.2-1+b1 libpython3.8-stdlib_3.8.2-1+b1 libquadmath0_10-20200402-1 libreadline8_8.0-4 libseccomp2_2.4.3-1 libselinux1_3.0-1+b2 libsemanage-common_3.0-1 libsemanage1_3.0-1+b2 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libsqlite3-0_3.31.1-4 libss2_1.45.6-1 libssl1.1_1.1.1f-1 libstdc++-8-dev_8.4.0-3 libstdc++-9-dev_9.3.0-10 libstdc++-9-dev-mips64el-cross_9.3.0-8cross1 libstdc++6_10-20200402-1 libstdc++6-mips64el-cross_10-20200324-1cross1 libsub-override-perl_0.09-2 libsystemd0_245.4-2 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libtsan0_10-20200402-1 libubsan1_10-20200402-1 libuchardet0_0.0.6-3 libudev1_245.4-2 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libxml-libxml-perl_2.0134+dfsg-2 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-4 libyaml-perl_1.30-1 libzstd1_1.4.4+dfsg-3 linux-libc-dev_5.5.13-2 linux-libc-dev-mips64el-cross_5.4.19-1cross1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mime-support_3.64 mount_2.34-0.1 ncbi-blast+_2.9.0-4 ncbi-data_6.1.20170106+dfsg1-8 ncurses-base_6.2-1 ncurses-bin_6.2-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.0-9 po-debconf_1.0.21 procps_2:3.3.16-4 python3_3.8.2-2 python3-minimal_3.8.2-2 python3.8_3.8.2-1+b1 python3.8-minimal_3.8.2-1+b1 readline-common_8.0-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 tzdata_2019c-3 ucf_3.0038+nmu1 util-linux_2.34-0.1 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: proteinortho Binary: proteinortho Architecture: any Version: 6.0.15+dfsg-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://gitlab.com/paulklemm_PHD/proteinortho Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/proteinortho Vcs-Git: https://salsa.debian.org/med-team/proteinortho.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 12), ncbi-blast+, liblapack-dev | libatlas-base-dev | liblapack.so, diamond-aligner, procps Package-List: proteinortho deb science optional arch=any Checksums-Sha1: 427bd92b4ca86e5c6f73864b7619995cd59a162b 431848 proteinortho_6.0.15+dfsg.orig.tar.xz 99b0e7dde1f6779a47952bd3396a95b2e4340c34 7676 proteinortho_6.0.15+dfsg-1.debian.tar.xz Checksums-Sha256: 1fe9842686e20a348ca8d199c09c68bdfd3356cf2c0db0d7a494c435b1d4be7e 431848 proteinortho_6.0.15+dfsg.orig.tar.xz e8b24f3349e45ca64e5454b82659141c368a1fe7875061d70c216f37dacce584 7676 proteinortho_6.0.15+dfsg-1.debian.tar.xz Files: 543203010e2d75527ae244000fded7ba 431848 proteinortho_6.0.15+dfsg.orig.tar.xz 9140078b98d9aa65841e40e0dfcda14d 7676 proteinortho_6.0.15+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAl6IQO0ACgkQPCZ2P2xn 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check signature: No public key dpkg-source: warning: failed to verify signature on ./proteinortho_6.0.15+dfsg-1.dsc dpkg-source: info: extracting proteinortho in /<> dpkg-source: info: unpacking proteinortho_6.0.15+dfsg.orig.tar.xz dpkg-source: info: unpacking proteinortho_6.0.15+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying python3 dpkg-source: info: applying hardening dpkg-source: info: applying deb_diamond dpkg-source: info: applying spelling Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mips64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-048ba2b2-01df-42ab-aa3d-c32083062884 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -amips64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package proteinortho dpkg-buildpackage: info: source version 6.0.15+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-architecture: warning: specified GNU system type mips64el-linux-gnuabi64 does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mips64el debian/rules clean dh clean dh_auto_clean make -j1 clean make[1]: Entering directory '/<>' rm -rf src/BUILD test/C.faa.* test/E.faa.* test/C2.faa.* test/L.faa.* test/M.faa.* rm -rf src/lapack-3.8.0/ make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a dh_auto_build -a make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=mips64el-linux-gnuabi64-pkg-config CXX=mips64el-linux-gnuabi64-g\+\+ CC=mips64el-linux-gnuabi64-gcc make[1]: Entering directory '/<>' Creating build directory ... [ 10%] Prepare proteinortho_clustering ... [ 20%] Building **proteinortho_clustering** with LAPACK (dynamic linking) mips64el-linux-gnuabi64-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wno-unused-result -fopenmp -o src/BUILD/Linux_x86_64/proteinortho_clustering src/proteinortho_clustering.cpp -Wl,-z,relro -Wl,-z,now -llapack -lblas -pthread -Wl,--whole-archive -lpthread -Wl,--no-whole-archive && ([ $? -eq 0 ] && echo "......OK dynamic linking was successful for proteinortho_clustering!";) || ( \ echo "......dynamic linking failed too, now I try dynamic linking without -WL,-whole-archive (this should now work for OSX)."; \ mips64el-linux-gnuabi64-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wno-unused-result -fopenmp -o src/BUILD/Linux_x86_64/proteinortho_clustering src/proteinortho_clustering.cpp -Wl,-z,relro -Wl,-z,now -llapack -lblas -pthread -lpthread && ([ $? -eq 0 ] && echo "......OK dynamic linking was successful for proteinortho_clustering!";) || ( \ echo "......dynamic linking failed (without -WL,-whole-archive) too too, now I try to openblas."; \ mips64el-linux-gnuabi64-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wno-unused-result -fopenmp -o src/BUILD/Linux_x86_64/proteinortho_clustering src/proteinortho_clustering.cpp -Wl,-z,relro -Wl,-z,now -lopenblas -pthread -lpthread && ([ $? -eq 0 ] && echo "......OK dynamic linking was successful for proteinortho_clustering!";) || ( \ echo "......last linking failed too too too, now I try to recompile lapack (v.3.8.0) and then compile proteinortho_clustering with dynamic linking."; \ echo "......[ 33%] Extracting the LAPACK library"; \ if [ ! -d src/lapack-3.8.0 ]; then cd src; tar -xzvf lapack-3.8.0.tar.gz > /dev/null 2>&1; cd ..; fi; \ echo "......[ 66%] Compiling the LAPACK library (using cmake + make)"; \ if [ ! -f src/lapack-3.8.0/build/lib/liblapack.a ]; then mkdir src/lapack-3.8.0/build 2> /dev/null; cd src/lapack-3.8.0/build; cmake .. -DCMAKE_CXX_COMPILER=mips64el-linux-gnuabi64-g++ > /dev/null; make all -j4 > /dev/null 2>&1; cd ../../.. ; fi; \ echo "......[ 99%] Building **proteinortho_clustering** with LAPACK (dynamic linking)"; \ mips64el-linux-gnuabi64-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wno-unused-result -fopenmp -o src/BUILD/Linux_x86_64/proteinortho_clustering src/proteinortho_clustering.cpp -Isrc/lapack-3.8.0/build/include/ -Lsrc/lapack-3.8.0/build/lib/ -llapack -lblas -Wl,-z,relro -Wl,-z,now -lgfortran && echo "......OK dynamic linking was successful for proteinortho_clustering!" || ( echo "" ) ; ) ) ) ......OK dynamic linking was successful for proteinortho_clustering! [ 25%] Building **graphMinusRemovegraph** mips64el-linux-gnuabi64-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wno-unused-result -o src/BUILD/Linux_x86_64/proteinortho_graphMinusRemovegraph src/graphMinusRemovegraph.cpp -Wl,-z,relro -Wl,-z,now [ 50%] Building **cleanupblastgraph** mips64el-linux-gnuabi64-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wno-unused-result -o src/BUILD/Linux_x86_64/proteinortho_cleanupblastgraph src/cleanupblastgraph.cpp -Wl,-z,relro -Wl,-z,now [ 75%] Building **po_tree** mips64el-linux-gnuabi64-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -o src/BUILD/Linux_x86_64/proteinortho_treeBuilderCore src/po_tree.c -Wl,-z,relro -Wl,-z,now src/po_tree.c: In function ‘fetch_matrix’: src/po_tree.c:330:2: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] 330 | fscanf (datei, "%d\n", viecher); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/po_tree.c:341:4: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] 341 | fscanf (datei, "%s ",(*pnamen)[i]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/po_tree.c:345:4: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] 345 | fscanf (datei, "%s \n",(*pnamen)[i]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/po_tree.c:378:4: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] 378 | fscanf (datei, "%c ",&(matrix[i][*ccs])); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/po_tree.c:381:3: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] 381 | fscanf (datei, "%c \n",&(matrix[(*viecher)-1][*ccs])); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [100%] Everything is compiled with no errors. make[1]: Leaving directory '/<>' dh_auto_test -a create-stamp debian/debhelper-build-stamp dh_testroot -a dh_prep -a dh_installdirs -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' mkdir -p /<>/debian/proteinortho/usr/bin dh_auto_install -- install PREFIX=/<>/debian/proteinortho/usr/bin make -j1 install DESTDIR=/<>/proteinortho-6.0.15\+dfsg/debian/proteinortho AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" install PREFIX=/<>/proteinortho-6.0.15\+dfsg/debian/proteinortho/usr/bin make[2]: Entering directory '/<>' INSTALLING everything to /<>/debian/proteinortho/usr/bin 'proteinortho6.pl' -> '/<>/debian/proteinortho/usr/bin/proteinortho6.pl' 'proteinortho' -> '/<>/debian/proteinortho/usr/bin/proteinortho' 'src/BUILD/Linux_x86_64/proteinortho_extract_from_graph.pl' -> '/<>/debian/proteinortho/usr/bin/proteinortho_extract_from_graph.pl' 'src/BUILD/Linux_x86_64/proteinortho_formatUsearch.pl' -> '/<>/debian/proteinortho/usr/bin/proteinortho_formatUsearch.pl' 'src/BUILD/Linux_x86_64/proteinortho_compareProteinorthoGraphs.pl' -> '/<>/debian/proteinortho/usr/bin/proteinortho_compareProteinorthoGraphs.pl' 'src/BUILD/Linux_x86_64/proteinortho_do_mcl.pl' -> '/<>/debian/proteinortho/usr/bin/proteinortho_do_mcl.pl' 'src/BUILD/Linux_x86_64/proteinortho2html.pl' -> '/<>/debian/proteinortho/usr/bin/proteinortho2html.pl' 'src/BUILD/Linux_x86_64/proteinortho2xml.pl' -> '/<>/debian/proteinortho/usr/bin/proteinortho2xml.pl' 'src/BUILD/Linux_x86_64/proteinortho_clustering' -> '/<>/debian/proteinortho/usr/bin/proteinortho_clustering' 'src/BUILD/Linux_x86_64/proteinortho_singletons.pl' -> '/<>/debian/proteinortho/usr/bin/proteinortho_singletons.pl' 'src/BUILD/Linux_x86_64/proteinortho_ffadj_mcs.py' -> '/<>/debian/proteinortho/usr/bin/proteinortho_ffadj_mcs.py' 'src/BUILD/Linux_x86_64/proteinortho2tree.pl' -> '/<>/debian/proteinortho/usr/bin/proteinortho2tree.pl' 'src/BUILD/Linux_x86_64/proteinortho_history.pl' -> '/<>/debian/proteinortho/usr/bin/proteinortho_history.pl' 'src/BUILD/Linux_x86_64/proteinortho_cleanupblastgraph' -> '/<>/debian/proteinortho/usr/bin/proteinortho_cleanupblastgraph' 'src/BUILD/Linux_x86_64/proteinortho_graphMinusRemovegraph' -> '/<>/debian/proteinortho/usr/bin/proteinortho_graphMinusRemovegraph' 'src/BUILD/Linux_x86_64/proteinortho_treeBuilderCore' -> '/<>/debian/proteinortho/usr/bin/proteinortho_treeBuilderCore' 'src/BUILD/Linux_x86_64/proteinortho_grab_proteins.pl' -> '/<>/debian/proteinortho/usr/bin/proteinortho_grab_proteins.pl' 'src/BUILD/Linux_x86_64/proteinortho_summary.pl' -> '/<>/debian/proteinortho/usr/bin/proteinortho_summary.pl' Everything installed successfully to /<>/debian/proteinortho/usr/bin. If needed you can add /<>/debian/proteinortho/usr/bin to $PATH with 'export PATH=$PATH:/<>/debian/proteinortho/usr/bin'. make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install for pl in `grep -Rl '#!/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \ sed -i '1s?^#!/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' ${pl} ; \ done make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a debian/rules override_dh_fixperms make[1]: Entering directory '/<>' dh_fixperms find debian \( -name "*.faa" -o -name "*.gff" \) -exec chmod -x \{\} \; make[1]: Leaving directory '/<>' dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'proteinortho' in '../proteinortho_6.0.15+dfsg-1_mips64el.deb'. dpkg-deb: building package 'proteinortho-dbgsym' in '../proteinortho-dbgsym_6.0.15+dfsg-1_mips64el.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../proteinortho_6.0.15+dfsg-1_mips64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-04-06T00:36:30Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ proteinortho_6.0.15+dfsg-1_mips64el.changes: -------------------------------------------- Format: 1.8 Date: Sat, 04 Apr 2020 10:05:46 +0200 Source: proteinortho Binary: proteinortho proteinortho-dbgsym Built-For-Profiles: cross nocheck Architecture: mips64el Version: 6.0.15+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: proteinortho - Detection of (Co-)orthologs in large-scale protein analysis Changes: proteinortho (6.0.15+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) Checksums-Sha1: 053d453bd57e61f7d9da583d9344c5f08a6c151f 1016660 proteinortho-dbgsym_6.0.15+dfsg-1_mips64el.deb b15cf4aa8acacee681fe2b9b2184ab43b9378554 5596 proteinortho_6.0.15+dfsg-1_mips64el.buildinfo f59a7ab4c9f84f5c74b1d88abfe9de2af9293f64 211276 proteinortho_6.0.15+dfsg-1_mips64el.deb Checksums-Sha256: 843b6405a253662187bc733900d691906bdabd8e8dac36c6443e0e3aee9e032d 1016660 proteinortho-dbgsym_6.0.15+dfsg-1_mips64el.deb c57ee52495f5eddfd8a6cd7a97149b4bee3606c8070df6c2a4cc8034e8e32fb3 5596 proteinortho_6.0.15+dfsg-1_mips64el.buildinfo 07bf594b5a4e947a678e2e178480b70af8aabba0349ad995d2582bf27920ed6d 211276 proteinortho_6.0.15+dfsg-1_mips64el.deb Files: 84b7151871543542a48b1a53f1ca82d8 1016660 debug optional proteinortho-dbgsym_6.0.15+dfsg-1_mips64el.deb d69012b1a37d40981f79d11373c6ee0b 5596 science optional proteinortho_6.0.15+dfsg-1_mips64el.buildinfo 002b96d135d81bb679ec874cd1f91c61 211276 science optional proteinortho_6.0.15+dfsg-1_mips64el.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: proteinortho Binary: proteinortho Architecture: mips64el Version: 6.0.15+dfsg-1 Checksums-Md5: 84b7151871543542a48b1a53f1ca82d8 1016660 proteinortho-dbgsym_6.0.15+dfsg-1_mips64el.deb 002b96d135d81bb679ec874cd1f91c61 211276 proteinortho_6.0.15+dfsg-1_mips64el.deb Checksums-Sha1: 053d453bd57e61f7d9da583d9344c5f08a6c151f 1016660 proteinortho-dbgsym_6.0.15+dfsg-1_mips64el.deb f59a7ab4c9f84f5c74b1d88abfe9de2af9293f64 211276 proteinortho_6.0.15+dfsg-1_mips64el.deb Checksums-Sha256: 843b6405a253662187bc733900d691906bdabd8e8dac36c6443e0e3aee9e032d 1016660 proteinortho-dbgsym_6.0.15+dfsg-1_mips64el.deb 07bf594b5a4e947a678e2e178480b70af8aabba0349ad995d2582bf27920ed6d 211276 proteinortho_6.0.15+dfsg-1_mips64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Mon, 06 Apr 2020 00:36:29 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11.1), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-6), binutils (= 2.34-5), binutils-common (= 2.34-5), binutils-x86-64-linux-gnu (= 2.34-5), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.34-0.1), build-essential (= 12.8), bzip2 (= 1.0.8-2), coreutils (= 8.30-3+b1), cpp (= 4:9.2.1-3.1), cpp-9 (= 9.3.0-10), dash (= 0.5.10.2-7), debconf (= 1.5.73), debhelper (= 12.10), debianutils (= 4.9.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.6.3-2), diamond-aligner (= 0.9.31-1), diffutils (= 1:3.7-3), dpkg (= 1.19.7), dpkg-dev (= 1.19.7), dwz (= 0.13-5), fdisk (= 2.34-0.1), file (= 1:5.38-4), findutils (= 4.7.0-1), g++ (= 4:9.2.1-3.1), g++-9 (= 9.3.0-10), gcc (= 4:9.2.1-3.1), gcc-10-base (= 10-20200402-1), gcc-9 (= 9.3.0-10), gcc-9-base (= 9.3.0-10), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), grep (= 3.4-1), groff-base (= 1.22.4-4), gzip (= 1.10-2), hostname (= 3.23), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-6), libarchive-zip-perl (= 1.68-1), libasan5 (= 9.3.0-10), libatomic1 (= 10-20200402-1), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3), libaudit1 (= 1:2.8.5-3), libbinutils (= 2.34-5), libblas-dev (= 3.9.0-2), libblas3 (= 3.9.0-2), libblkid1 (= 2.34-0.1), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.8-2), libc-bin (= 2.30-4), libc-dev-bin (= 2.30-4), libc6 (= 2.30-4), libc6-dev (= 2.30-4), libcap-ng0 (= 0.7.9-2.1+b2), libcc1-0 (= 10-20200402-1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.16-1), libcrypt1 (= 1:4.4.16-1), libctf-nobfd0 (= 2.34-5), libctf0 (= 2.34-5), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.251), libdebhelper-perl (= 12.10), libdpkg-perl (= 1.19.7), libelf1 (= 0.176-1.1), libexpat1 (= 2.2.9-1), libfdisk1 (= 2.34-0.1), libffi7 (= 3.3-4), libfile-stripnondeterminism-perl (= 1.6.3-2), libgcc-9-dev (= 9.3.0-10), libgcc-s1 (= 10-20200402-1), libgcc1 (= 1:10-20200402-1), libgcrypt20 (= 1.8.5-5), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libgfortran5 (= 10-20200402-1), libglib2.0-0 (= 2.64.1-1), libgmp10 (= 2:6.2.0+dfsg-4), libgomp1 (= 10-20200402-1), libgpg-error0 (= 1.37-1), libicu63 (= 63.2-3), libisl22 (= 0.22.1-1), libitm1 (= 10-20200402-1), liblapack-dev (= 3.9.0-2), liblapack3 (= 3.9.0-2), liblmdb0 (= 0.9.24-1), liblsan0 (= 10-20200402-1), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-4), libmagic1 (= 1:5.38-4), libmbedcrypto3 (= 2.16.5-1), libmbedtls12 (= 2.16.5-1), libmbedx509-0 (= 2.16.5-1), libmount1 (= 2.34-0.1), libmpc3 (= 1.1.0-1), libmpdec2 (= 2.4.2-3), libmpfr6 (= 4.0.2-1), libncurses6 (= 6.2-1), libncursesw6 (= 6.2-1), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-12+b1), libperl5.30 (= 5.30.0-9), libpipeline1 (= 1.5.2-2), libprocps8 (= 2:3.3.16-4), libpython3-stdlib (= 3.8.2-2), libpython3.8-minimal (= 3.8.2-1+b1), libpython3.8-stdlib (= 3.8.2-1+b1), libquadmath0 (= 10-20200402-1), libreadline8 (= 8.0-4), libseccomp2 (= 2.4.3-1), libselinux1 (= 3.0-1+b2), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.34-0.1), libsqlite3-0 (= 3.31.1-4), libssl1.1 (= 1.1.1f-1), libstdc++-9-dev (= 9.3.0-10), libstdc++6 (= 10-20200402-1), libsub-override-perl (= 0.09-2), libsystemd0 (= 245.4-2), libtinfo6 (= 6.2-1), libtool (= 2.4.6-14), libtsan0 (= 10-20200402-1), libubsan1 (= 10-20200402-1), libuchardet0 (= 0.0.6-3), libudev1 (= 245.4-2), libunistring2 (= 0.9.10-2), libuuid1 (= 2.34-0.1), libxml2 (= 2.9.10+dfsg-4), linux-libc-dev (= 5.5.13-2), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.2.1-1.2), man-db (= 2.9.1-1), mawk (= 1.3.4.20200120-2), mime-support (= 3.64), ncbi-blast+ (= 2.9.0-4), ncbi-data (= 6.1.20170106+dfsg1-8), ncurses-base (= 6.2-1), ncurses-bin (= 6.2-1), patch (= 2.7.6-6), perl (= 5.30.0-9), perl-base (= 5.30.0-9), perl-modules-5.30 (= 5.30.0-9), po-debconf (= 1.0.21), procps (= 2:3.3.16-4), python3 (= 3.8.2-2), python3-minimal (= 3.8.2-2), python3.8 (= 3.8.2-1+b1), python3.8-minimal (= 3.8.2-1+b1), readline-common (= 8.0-4), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-3), tar (= 1.30+dfsg-7), util-linux (= 2.34-0.1), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1585987546" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ proteinortho-dbgsym_6.0.15+dfsg-1_mips64el.deb ---------------------------------------------- new Debian package, version 2.0. size 1016660 bytes: control archive=760 bytes. 529 bytes, 12 lines control 520 bytes, 5 lines md5sums Package: proteinortho-dbgsym Source: proteinortho Version: 6.0.15+dfsg-1 Auto-Built-Package: debug-symbols Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 1074 Depends: proteinortho (= 6.0.15+dfsg-1) Section: debug Priority: optional Description: debug symbols for proteinortho Build-Ids: 78d762dd9dca034ef6f1e8bd509f42f786734d64 7be482ed12929410975a6fa2d518f9ac9412179d d7a26334e8a42376811cc4bad63fbfc42868a761 ecba34077469abf91a01a68a98907053c853ff42 drwxr-xr-x root/root 0 2020-04-04 08:05 ./ drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/ drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/lib/ drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/lib/debug/.build-id/78/ -rw-r--r-- root/root 16432 2020-04-04 08:05 ./usr/lib/debug/.build-id/78/d762dd9dca034ef6f1e8bd509f42f786734d64.debug drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/lib/debug/.build-id/7b/ -rw-r--r-- root/root 121000 2020-04-04 08:05 ./usr/lib/debug/.build-id/7b/e482ed12929410975a6fa2d518f9ac9412179d.debug drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/lib/debug/.build-id/d7/ -rw-r--r-- root/root 144304 2020-04-04 08:05 ./usr/lib/debug/.build-id/d7/a26334e8a42376811cc4bad63fbfc42868a761.debug drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/lib/debug/.build-id/ec/ -rw-r--r-- root/root 767400 2020-04-04 08:05 ./usr/lib/debug/.build-id/ec/ba34077469abf91a01a68a98907053c853ff42.debug drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/lib/debug/.dwz/mips64el-linux-gnuabi64/ -rw-r--r-- root/root 31968 2020-04-04 08:05 ./usr/lib/debug/.dwz/mips64el-linux-gnuabi64/proteinortho.debug drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/share/ drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-04-04 08:05 ./usr/share/doc/proteinortho-dbgsym -> proteinortho proteinortho_6.0.15+dfsg-1_mips64el.deb --------------------------------------- new Debian package, version 2.0. size 211276 bytes: control archive=1836 bytes. 971 bytes, 17 lines control 2463 bytes, 34 lines md5sums Package: proteinortho Version: 6.0.15+dfsg-1 Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 803 Depends: libc6 (>= 2.7), libgcc-s1 (>= 3.0), libgomp1 (>= 6), liblapack3, libstdc++6 (>= 5.2), perl:any, python3, ncbi-blast+, diamond-aligner, procps Section: science Priority: optional Homepage: https://gitlab.com/paulklemm_PHD/proteinortho Description: Detection of (Co-)orthologs in large-scale protein analysis Proteinortho is a stand-alone tool that is geared towards large datasets and makes use of distributed computing techniques when run on multi-core hardware. It implements an extended version of the reciprocal best alignment heuristic. Proteinortho was applied to compute orthologous proteins in the complete set of all 717 eubacterial genomes available at NCBI at the beginning of 2009. Authors succeeded identifying thirty proteins present in 99% of all bacterial proteomes. drwxr-xr-x root/root 0 2020-04-04 08:05 ./ drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/ drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/bin/ lrwxrwxrwx root/root 0 2020-04-04 08:05 ./usr/bin/proteinortho -> proteinortho6.pl -rwxr-xr-x root/root 38265 2020-04-04 08:05 ./usr/bin/proteinortho2html.pl -rwxr-xr-x root/root 4997 2020-04-04 08:05 ./usr/bin/proteinortho2tree.pl -rwxr-xr-x root/root 4697 2020-04-04 08:05 ./usr/bin/proteinortho2xml.pl -rwxr-xr-x root/root 148857 2020-04-04 08:05 ./usr/bin/proteinortho6.pl -rwxr-xr-x root/root 41400 2020-04-04 08:05 ./usr/bin/proteinortho_cleanupblastgraph -rwxr-xr-x root/root 184984 2020-04-04 08:05 ./usr/bin/proteinortho_clustering -rwxr-xr-x root/root 1239 2020-04-04 08:05 ./usr/bin/proteinortho_compareProteinorthoGraphs.pl -rwxr-xr-x root/root 8787 2020-04-04 08:05 ./usr/bin/proteinortho_do_mcl.pl -rwxr-xr-x root/root 1166 2020-04-04 08:05 ./usr/bin/proteinortho_extract_from_graph.pl -rwxr-xr-x root/root 32953 2020-04-04 08:05 ./usr/bin/proteinortho_ffadj_mcs.py -rwxr-xr-x root/root 479 2020-04-04 08:05 ./usr/bin/proteinortho_formatUsearch.pl -rwxr-xr-x root/root 10913 2020-04-04 08:05 ./usr/bin/proteinortho_grab_proteins.pl -rwxr-xr-x root/root 32760 2020-04-04 08:05 ./usr/bin/proteinortho_graphMinusRemovegraph -rwxr-xr-x root/root 27858 2020-04-04 08:05 ./usr/bin/proteinortho_history.pl -rwxr-xr-x root/root 1616 2020-04-04 08:05 ./usr/bin/proteinortho_singletons.pl -rwxr-xr-x root/root 10921 2020-04-04 08:05 ./usr/bin/proteinortho_summary.pl -rwxr-xr-x root/root 15448 2020-04-04 08:05 ./usr/bin/proteinortho_treeBuilderCore drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/lib/ drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/lib/proteinortho/ drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/share/ drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/share/doc/proteinortho/ -rw-r--r-- root/root 263 2020-01-13 10:30 ./usr/share/doc/proteinortho/README.test -rw-r--r-- root/root 1259 2020-04-04 08:05 ./usr/share/doc/proteinortho/changelog.Debian.gz -rw-r--r-- root/root 6305 2020-03-30 10:30 ./usr/share/doc/proteinortho/changelog.gz -rw-r--r-- root/root 1081 2020-04-04 08:05 ./usr/share/doc/proteinortho/copyright drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/share/doc/proteinortho/examples/ -rw-r--r-- root/root 52855 2020-03-30 10:30 ./usr/share/doc/proteinortho/examples/C.faa -rw-r--r-- root/root 18467 2020-03-30 10:30 ./usr/share/doc/proteinortho/examples/C.gff -rw-r--r-- root/root 751 2020-03-30 10:30 ./usr/share/doc/proteinortho/examples/C2.faa -rw-r--r-- root/root 120 2020-03-30 10:30 ./usr/share/doc/proteinortho/examples/C2.gff -rw-r--r-- root/root 55942 2020-03-30 10:30 ./usr/share/doc/proteinortho/examples/E.faa -rw-r--r-- root/root 18666 2020-03-30 10:30 ./usr/share/doc/proteinortho/examples/E.gff -rw-r--r-- root/root 27375 2020-03-30 10:30 ./usr/share/doc/proteinortho/examples/L.faa -rw-r--r-- root/root 2376 2020-03-30 10:30 ./usr/share/doc/proteinortho/examples/L.gff -rw-r--r-- root/root 27690 2020-03-30 10:30 ./usr/share/doc/proteinortho/examples/M.faa -rw-r--r-- root/root 2317 2020-03-30 10:30 ./usr/share/doc/proteinortho/examples/M.gff -rwxr-xr-x root/root 262 2020-03-30 10:30 ./usr/share/doc/proteinortho/examples/chk_test.pl -rw-r--r-- root/root 2242 2020-02-17 13:41 ./usr/share/doc/proteinortho/run-unit-test drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/share/man/ drwxr-xr-x root/root 0 2020-04-04 08:05 ./usr/share/man/man1/ lrwxrwxrwx root/root 0 2020-04-04 08:05 ./usr/share/man/man1/proteinortho.1.gz -> proteinortho6.1.gz -rw-r--r-- root/root 1562 2020-04-04 08:05 ./usr/share/man/man1/proteinortho6.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [585 B] Get:5 copy:/<>/apt_archive ./ Packages [655 B] Fetched 2203 B in 0s (84.7 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcpanel-json-xs-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults t1utils Suggested packages: libxml-parser-perl libdata-dump-perl ca-certificates libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl Recommended packages: gnupg libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libperl4-corelibs-perl libauthen-sasl-perl libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcpanel-json-xs-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults sbuild-build-depends-lintian-dummy:mips64el t1utils 0 upgraded, 76 newly installed, 0 to remove and 0 not upgraded. Need to get 6925 kB of archives. After this operation, 20.6 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 6.1 [19.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.63-1 [35.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.3-7 [50.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.20-1 [532 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.20-1 [894 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b3 [71.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b2 [11.3 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1 [12.6 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b1 [15.9 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b2 [25.6 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1 [12.9 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b2 [46.0 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.24-1 [18.6 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 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http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.75-1 [269 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.8 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-loop-epoll-perl all 0.20-1 [11.9 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.12-1 [36.3 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-2 [101 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004000-1 [12.5 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.53-1 [68.9 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b5 [63.6 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.003006-1 [58.7 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1 [10.2 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b2 [12.0 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1 [13.5 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.011+ds-1 [106 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.011+ds-1 [108 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.010001-1 [338 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b1 [20.2 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-writer-perl all 0.625-1 [29.7 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.81+repack-1 [35.4 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2+b1 [91.4 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.62.0 [1292 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 6925 kB in 0s (31.9 MB/s) Selecting previously unselected package netbase. (Reading database ... 22027 files and directories currently installed.) Preparing to unpack .../00-netbase_6.1_all.deb ... Unpacking netbase (6.1) ... Selecting previously unselected package diffstat. Preparing to unpack .../01-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../02-libassuan0_2.5.3-7_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7) ... Selecting previously unselected package gpgconf. Preparing to unpack .../03-gpgconf_2.2.20-1_amd64.deb ... Unpacking gpgconf (2.2.20-1) ... Selecting previously unselected package gpg. Preparing to unpack .../04-gpg_2.2.20-1_amd64.deb ... Unpacking gpg (2.2.20-1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../05-libapt-pkg-perl_0.1.36+b3_amd64.deb ... Unpacking libapt-pkg-perl (0.1.36+b3) ... Selecting previously unselected package libb-hooks-op-check-perl. 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Setting up lintian (2.62.0) ... Setting up sbuild-build-depends-lintian-dummy:mips64el (0.invalid.0) ... Processing triggers for man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.30-4) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 11580 Build-Time: 26 Distribution: unstable Foreign Architectures: mips64el Host Architecture: mips64el Install-Time: 24 Job: proteinortho_6.0.15+dfsg-1 Lintian: pass Machine Architecture: amd64 Package: proteinortho Package-Time: 60 Source-Version: 6.0.15+dfsg-1 Space: 11580 Status: successful Version: 6.0.15+dfsg-1 -------------------------------------------------------------------------------- Finished at 2020-04-06T00:36:30Z Build needed 00:01:00, 11580k disk space