sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | proteinortho 6.3.1+dfsg-1 (ppc64el) Mon, 09 Mar 2026 15:59:21 +0000 | +==============================================================================+ Package: proteinortho Version: 6.3.1+dfsg-1 Source Version: 6.3.1+dfsg-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: ppc64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-0de9ce30-5bfb-427b-8de5-7e29be08ecc4' with '<>' I: NOTICE: Log filtering will replace 'build/proteinortho-eLGfJm/resolver-rrNNGf' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian unstable InRelease [187 kB] Get:2 http://localhost:3142/debian unstable/contrib Sources.diff/Index [63.3 kB] Get:3 http://localhost:3142/debian unstable/main Sources.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian unstable/non-free Sources.diff/Index [63.3 kB] Get:5 http://localhost:3142/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:6 http://localhost:3142/debian unstable/contrib Sources T-2026-03-09-0200.39-F-2026-03-09-0200.39.pdiff [714 B] Get:7 http://localhost:3142/debian unstable/main Sources T-2026-03-09-1400.16-F-2026-03-09-0200.39.pdiff [53.6 kB] Get:8 http://localhost:3142/debian unstable/non-free Sources T-2026-03-09-1400.16-F-2026-03-09-1400.16.pdiff [68 B] Get:6 http://localhost:3142/debian unstable/contrib Sources T-2026-03-09-0200.39-F-2026-03-09-0200.39.pdiff [714 B] Get:9 http://localhost:3142/debian unstable/main amd64 Packages T-2026-03-09-1400.16-F-2026-03-09-0200.39.pdiff [86.1 kB] Get:8 http://localhost:3142/debian unstable/non-free Sources T-2026-03-09-1400.16-F-2026-03-09-1400.16.pdiff [68 B] Get:7 http://localhost:3142/debian unstable/main Sources T-2026-03-09-1400.16-F-2026-03-09-0200.39.pdiff [53.6 kB] Get:9 http://localhost:3142/debian unstable/main amd64 Packages T-2026-03-09-1400.16-F-2026-03-09-0200.39.pdiff [86.1 kB] Get:10 http://localhost:3142/debian unstable/main ppc64el Packages [10.1 MB] Fetched 10.7 MB in 3s (3742 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'proteinortho' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/proteinortho.git Please use: git clone https://salsa.debian.org/med-team/proteinortho.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 385 kB of source archives. Get:1 http://localhost:3142/debian unstable/main proteinortho 6.3.1+dfsg-1 (dsc) [2161 B] Get:2 http://localhost:3142/debian unstable/main proteinortho 6.3.1+dfsg-1 (tar) [376 kB] Get:3 http://localhost:3142/debian unstable/main proteinortho 6.3.1+dfsg-1 (diff) [7248 B] Fetched 385 kB in 1s (371 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/proteinortho-eLGfJm/proteinortho-6.3.1+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/proteinortho-eLGfJm' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), ncbi-blast+, liblapack-dev | libatlas-base-dev | liblapack.so, diamond-aligner (>= 2.0.10~), procps, debhelper, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el Filtered Build-Depends: debhelper-compat (= 13), ncbi-blast+, liblapack-dev, diamond-aligner (>= 2.0.10~), procps, debhelper, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el dpkg-deb: warning: root directory /<>/sbuild-build-depends-main-dummy has unusual owner or group 1000:119 dpkg-deb: hint: you might need to pass --root-owner-group, see for further details dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [832 B] Get:5 copy:/<>/apt_archive ./ Packages [842 B] Fetched 2283 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdextrautils cpp-15-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism diamond-aligner:ppc64el dwz fakeroot file g++-15-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-15-base:ppc64el gcc-15-cross-base gcc-15-powerpc64le-linux-gnu gcc-15-powerpc64le-linux-gnu-base gcc-16-base:ppc64el gcc-powerpc64le-linux-gnu gettext gettext-base groff-base intltool-debian isa-support libarchive-zip-perl libasan8:ppc64el libasan8-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libblas-dev:ppc64el libblas3:ppc64el libc-gconv-modules-extra:ppc64el libc6:ppc64el libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libdebhelper-perl libelf1t64 libexpat1 libfakeroot libffi8 libfile-stripnondeterminism-perl libgcc-15-dev:ppc64el libgcc-15-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgfortran5:ppc64el libgomp1:ppc64el libgomp1-ppc64el-cross libitm1:ppc64el libitm1-ppc64el-cross liblapack-dev:ppc64el liblapack3:ppc64el liblmdb0 liblsan0:ppc64el liblsan0-ppc64el-cross libmagic-mgc libmagic1t64 libmbedcrypto16 libmbedtls21 libmbedx509-7 libncbi-vdb3 libncursesw6 libnghttp2-14 libpipeline1 libproc2-0 libpython3-stdlib libpython3.13-minimal libpython3.13-stdlib libquadmath0:ppc64el libquadmath0-ppc64el-cross libreadline8t64 libsqlite3-0 libstdc++-15-dev:ppc64el libstdc++-15-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libtool libtsan2:ppc64el libtsan2-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libunistring5 libuv1t64 libxml2-16 linux-libc-dev-ppc64el-cross m4 man-db media-types ncbi-blast+ ncbi-data ncbi-vdb-data netbase po-debconf procps python3 python3-minimal python3.13 python3.13-minimal readline-common sensible-utils sse4.2-support zlib1g:ppc64el Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-15-locales cpp-15-doc cpp-doc dh-make gcc-15-doc manpages-dev flex bison gdb-powerpc64le-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev gnulib-l10n groff liblapack-doc:ppc64el glibc-doc:ppc64el libc-l10n:ppc64el locales:ppc64el libnss-nis:ppc64el libnss-nisplus:ppc64el manpages-dev:ppc64el libstdc++-15-doc:ppc64el libtool-doc gfortran | fortran95-compiler m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python3.13-venv python3.13-doc binfmt-support readline-doc Recommended packages: med-config:ppc64el curl | wget | lynx libidn2-0:ppc64el libarchive-cpio-perl libgpm2 libltdl-dev libmail-sendmail-perl psmisc linux-sysctl-defaults ca-certificates The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdextrautils cpp-15-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism diamond-aligner:ppc64el dwz fakeroot file g++-15-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-15-base:ppc64el gcc-15-cross-base gcc-15-powerpc64le-linux-gnu gcc-15-powerpc64le-linux-gnu-base gcc-16-base:ppc64el gcc-powerpc64le-linux-gnu gettext gettext-base groff-base intltool-debian isa-support libarchive-zip-perl libasan8:ppc64el libasan8-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libblas-dev:ppc64el libblas3:ppc64el libc-gconv-modules-extra:ppc64el libc6:ppc64el libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libdebhelper-perl libelf1t64 libexpat1 libfakeroot libffi8 libfile-stripnondeterminism-perl libgcc-15-dev:ppc64el libgcc-15-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgfortran5:ppc64el libgomp1:ppc64el libgomp1-ppc64el-cross libitm1:ppc64el libitm1-ppc64el-cross liblapack-dev:ppc64el liblapack3:ppc64el liblmdb0 liblsan0:ppc64el liblsan0-ppc64el-cross libmagic-mgc libmagic1t64 libmbedcrypto16 libmbedtls21 libmbedx509-7 libncbi-vdb3 libncursesw6 libnghttp2-14 libpipeline1 libproc2-0 libpython3-stdlib libpython3.13-minimal libpython3.13-stdlib libquadmath0:ppc64el libquadmath0-ppc64el-cross libreadline8t64 libsqlite3-0 libstdc++-15-dev:ppc64el libstdc++-15-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libtool libtsan2:ppc64el libtsan2-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libunistring5 libuv1t64 libxml2-16 linux-libc-dev-ppc64el-cross m4 man-db media-types ncbi-blast+ ncbi-data ncbi-vdb-data netbase po-debconf procps python3 python3-minimal python3.13 python3.13-minimal readline-common sbuild-build-depends-main-dummy:ppc64el sensible-utils sse4.2-support zlib1g:ppc64el 0 upgraded, 110 newly installed, 0 to remove and 0 not upgraded. Need to get 133 MB of archives. After this operation, 569 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [968 B] Get:2 http://localhost:3142/debian unstable/main amd64 libexpat1 amd64 2.7.4-1 [116 kB] Get:3 http://localhost:3142/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.12-1 [866 kB] Get:4 http://localhost:3142/debian unstable/main amd64 python3.13-minimal amd64 3.13.12-1 [2267 kB] Get:5 http://localhost:3142/debian unstable/main amd64 python3-minimal amd64 3.13.9-3 [27.6 kB] Get:6 http://localhost:3142/debian unstable/main amd64 media-types all 14.0.0 [30.8 kB] Get:7 http://localhost:3142/debian unstable/main amd64 netbase all 6.5 [12.4 kB] Get:8 http://localhost:3142/debian unstable/main amd64 libffi8 amd64 3.5.2-3+b1 [26.4 kB] Get:9 http://localhost:3142/debian unstable/main amd64 libncursesw6 amd64 6.6+20251231-1 [137 kB] Get:10 http://localhost:3142/debian unstable/main amd64 readline-common all 8.3-4 [74.8 kB] Get:11 http://localhost:3142/debian unstable/main amd64 libreadline8t64 amd64 8.3-4 [181 kB] Get:12 http://localhost:3142/debian unstable/main amd64 libsqlite3-0 amd64 3.46.1-9+b1 [918 kB] Get:13 http://localhost:3142/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.12-1 [1974 kB] Get:14 http://localhost:3142/debian unstable/main amd64 python3.13 amd64 3.13.12-1 [776 kB] Get:15 http://localhost:3142/debian unstable/main amd64 libpython3-stdlib amd64 3.13.9-3 [10.5 kB] Get:16 http://localhost:3142/debian unstable/main amd64 python3 amd64 3.13.9-3 [27.6 kB] Get:17 http://localhost:3142/debian unstable/main amd64 isa-support amd64 27+b1 [15.5 kB] Get:18 http://localhost:3142/debian unstable/main amd64 sse4.2-support amd64 27+b1 [3692 B] Get:19 http://localhost:3142/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-9+b1 [66.1 kB] Get:20 http://localhost:3142/debian unstable/main amd64 procps amd64 2:4.0.4-9+b1 [883 kB] Get:21 http://localhost:3142/debian unstable/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get:22 http://localhost:3142/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-5+b1 [338 kB] Get:23 http://localhost:3142/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-5+b1 [110 kB] Get:24 http://localhost:3142/debian unstable/main amd64 file amd64 1:5.46-5+b1 [43.8 kB] Get:25 http://localhost:3142/debian unstable/main amd64 gettext-base amd64 0.23.2-1 [245 kB] Get:26 http://localhost:3142/debian unstable/main amd64 libuchardet0 amd64 0.0.8-2+b1 [68.8 kB] Get:27 http://localhost:3142/debian unstable/main amd64 groff-base amd64 1.23.0-10 [1194 kB] Get:28 http://localhost:3142/debian unstable/main amd64 bsdextrautils amd64 2.41.3-4 [98.9 kB] Get:29 http://localhost:3142/debian unstable/main amd64 libpipeline1 amd64 1.5.8-2 [42.1 kB] Get:30 http://localhost:3142/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get:31 http://localhost:3142/debian unstable/main amd64 m4 amd64 1.4.21-1 [332 kB] Get:32 http://localhost:3142/debian unstable/main amd64 autoconf all 2.72-6 [494 kB] Get:33 http://localhost:3142/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get:34 http://localhost:3142/debian unstable/main amd64 automake all 1:1.18.1-4 [877 kB] Get:35 http://localhost:3142/debian unstable/main amd64 autopoint all 0.23.2-1 [772 kB] Get:36 http://localhost:3142/debian unstable/main amd64 binutils-powerpc64le-linux-gnu amd64 2.46-3 [1565 kB] Get:37 http://localhost:3142/debian unstable/main amd64 gcc-15-powerpc64le-linux-gnu-base amd64 15.2.0-13cross1 [55.1 kB] Get:38 http://localhost:3142/debian unstable/main amd64 cpp-15-powerpc64le-linux-gnu amd64 15.2.0-13cross1 [11.0 MB] Get:39 http://localhost:3142/debian unstable/main amd64 cpp-powerpc64le-linux-gnu amd64 4:15.2.0-5 [5336 B] Get:40 http://localhost:3142/debian unstable/main amd64 gcc-15-cross-base all 15.2.0-13cross1 [50.4 kB] Get:41 http://localhost:3142/debian unstable/main amd64 libc6-ppc64el-cross all 2.42-12cross1 [1462 kB] Get:42 http://localhost:3142/debian unstable/main amd64 libgcc-s1-ppc64el-cross all 15.2.0-13cross1 [52.4 kB] Get:43 http://localhost:3142/debian unstable/main amd64 libgomp1-ppc64el-cross all 15.2.0-13cross1 [141 kB] Get:44 http://localhost:3142/debian unstable/main amd64 libitm1-ppc64el-cross all 15.2.0-13cross1 [28.5 kB] Get:45 http://localhost:3142/debian unstable/main amd64 libatomic1-ppc64el-cross all 15.2.0-13cross1 [10.1 kB] Get:46 http://localhost:3142/debian unstable/main amd64 libasan8-ppc64el-cross all 15.2.0-13cross1 [2712 kB] Get:47 http://localhost:3142/debian unstable/main amd64 liblsan0-ppc64el-cross all 15.2.0-13cross1 [1253 kB] Get:48 http://localhost:3142/debian unstable/main amd64 libtsan2-ppc64el-cross all 15.2.0-13cross1 [2449 kB] Get:49 http://localhost:3142/debian unstable/main amd64 libstdc++6-ppc64el-cross all 15.2.0-13cross1 [773 kB] Get:50 http://localhost:3142/debian unstable/main amd64 libubsan1-ppc64el-cross all 15.2.0-13cross1 [1177 kB] Get:51 http://localhost:3142/debian unstable/main amd64 libquadmath0-ppc64el-cross all 15.2.0-13cross1 [156 kB] Get:52 http://localhost:3142/debian unstable/main amd64 libgcc-15-dev-ppc64el-cross all 15.2.0-13cross1 [1455 kB] Get:53 http://localhost:3142/debian unstable/main amd64 gcc-15-powerpc64le-linux-gnu amd64 15.2.0-13cross1 [21.1 MB] Get:54 http://localhost:3142/debian unstable/main amd64 gcc-powerpc64le-linux-gnu amd64 4:15.2.0-5 [1460 B] Get:55 http://localhost:3142/debian unstable/main amd64 linux-libc-dev-ppc64el-cross all 6.19.6-1 [12.1 kB] Get:56 http://localhost:3142/debian unstable/main amd64 libc6-dev-ppc64el-cross all 2.42-12cross1 [1927 kB] Get:57 http://localhost:3142/debian unstable/main amd64 libstdc++-15-dev-ppc64el-cross all 15.2.0-13cross1 [2548 kB] Get:58 http://localhost:3142/debian unstable/main amd64 g++-15-powerpc64le-linux-gnu amd64 15.2.0-13cross1 [12.0 MB] Get:59 http://localhost:3142/debian unstable/main amd64 g++-powerpc64le-linux-gnu amd64 4:15.2.0-5 [1212 B] Get:60 http://localhost:3142/debian unstable/main amd64 crossbuild-essential-ppc64el all 12.12 [3560 B] Get:61 http://localhost:3142/debian unstable/main amd64 libdebhelper-perl all 13.31 [75.7 kB] Get:62 http://localhost:3142/debian unstable/main amd64 libtool all 2.5.4-9 [540 kB] Get:63 http://localhost:3142/debian unstable/main amd64 dh-autoreconf all 22 [12.2 kB] Get:64 http://localhost:3142/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:65 http://localhost:3142/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get:66 http://localhost:3142/debian unstable/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get:67 http://localhost:3142/debian unstable/main amd64 libelf1t64 amd64 0.194-1 [185 kB] Get:68 http://localhost:3142/debian unstable/main amd64 dwz amd64 0.16-2 [108 kB] Get:69 http://localhost:3142/debian unstable/main amd64 libunistring5 amd64 1.4.2-1 [480 kB] Get:70 http://localhost:3142/debian unstable/main amd64 libxml2-16 amd64 2.15.1+dfsg-2+b1 [641 kB] Get:71 http://localhost:3142/debian unstable/main amd64 gettext amd64 0.23.2-1 [1687 kB] Get:72 http://localhost:3142/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:73 http://localhost:3142/debian unstable/main amd64 po-debconf all 1.0.22 [216 kB] Get:74 http://localhost:3142/debian unstable/main amd64 debhelper all 13.31 [932 kB] Get:75 http://localhost:3142/debian unstable/main ppc64el gcc-16-base ppc64el 16-20260308-1 [35.4 kB] Get:76 http://localhost:3142/debian unstable/main ppc64el libgcc-s1 ppc64el 16-20260308-1 [52.0 kB] Get:77 http://localhost:3142/debian unstable/main ppc64el libc-gconv-modules-extra ppc64el 2.42-13 [1150 kB] Get:78 http://localhost:3142/debian unstable/main ppc64el libc6 ppc64el 2.42-13 [1698 kB] Get:79 http://localhost:3142/debian unstable/main ppc64el libstdc++6 ppc64el 16-20260308-1 [831 kB] Get:80 http://localhost:3142/debian unstable/main ppc64el zlib1g ppc64el 1:1.3.dfsg+really1.3.1-3 [88.7 kB] Get:81 http://localhost:3142/debian unstable/main ppc64el diamond-aligner ppc64el 2.1.14-1 [2017 kB] Get:82 http://localhost:3142/debian unstable/main amd64 libfakeroot amd64 1.37.2-1 [29.9 kB] Get:83 http://localhost:3142/debian unstable/main amd64 fakeroot amd64 1.37.2-1 [76.2 kB] Get:84 http://localhost:3142/debian unstable/main ppc64el gcc-15-base ppc64el 15.2.0-15 [35.9 kB] Get:85 http://localhost:3142/debian unstable/main ppc64el libasan8 ppc64el 16-20260308-1 [2794 kB] Get:86 http://localhost:3142/debian unstable/main ppc64el libatomic1 ppc64el 16-20260308-1 [10.3 kB] Get:87 http://localhost:3142/debian unstable/main ppc64el libblas3 ppc64el 3.12.1-7+b1 [169 kB] Get:88 http://localhost:3142/debian unstable/main ppc64el libblas-dev ppc64el 3.12.1-7+b1 [184 kB] Get:89 http://localhost:3142/debian unstable/main ppc64el libc6-dev ppc64el 2.42-13 [1933 kB] Get:90 http://localhost:3142/debian unstable/main ppc64el libgomp1 ppc64el 16-20260308-1 [155 kB] Get:91 http://localhost:3142/debian unstable/main ppc64el libitm1 ppc64el 16-20260308-1 [29.1 kB] Get:92 http://localhost:3142/debian unstable/main ppc64el liblsan0 ppc64el 16-20260308-1 [1273 kB] Get:93 http://localhost:3142/debian unstable/main ppc64el libtsan2 ppc64el 16-20260308-1 [2513 kB] Get:94 http://localhost:3142/debian unstable/main ppc64el libubsan1 ppc64el 16-20260308-1 [1195 kB] Get:95 http://localhost:3142/debian unstable/main ppc64el libquadmath0 ppc64el 16-20260308-1 [157 kB] Get:96 http://localhost:3142/debian unstable/main ppc64el libgcc-15-dev ppc64el 15.2.0-15 [1465 kB] Get:97 http://localhost:3142/debian unstable/main ppc64el libgfortran5 ppc64el 16-20260308-1 [562 kB] Get:98 http://localhost:3142/debian unstable/main ppc64el liblapack3 ppc64el 3.12.1-7+b1 [2157 kB] Get:99 http://localhost:3142/debian unstable/main ppc64el liblapack-dev ppc64el 3.12.1-7+b1 [4554 kB] Get:100 http://localhost:3142/debian unstable/main amd64 liblmdb0 amd64 0.9.31-1+b3 [46.1 kB] Get:101 http://localhost:3142/debian unstable/main amd64 libmbedcrypto16 amd64 3.6.5-0.1 [363 kB] Get:102 http://localhost:3142/debian unstable/main amd64 libmbedx509-7 amd64 3.6.5-0.1 [152 kB] Get:103 http://localhost:3142/debian unstable/main amd64 libmbedtls21 amd64 3.6.5-0.1 [246 kB] Get:104 http://localhost:3142/debian unstable/main amd64 ncbi-vdb-data all 3.2.1+dfsg-2 [88.5 kB] Get:105 http://localhost:3142/debian unstable/main amd64 libncbi-vdb3 amd64 3.2.1+dfsg-2+b1 [1180 kB] Get:106 http://localhost:3142/debian unstable/main amd64 libnghttp2-14 amd64 1.68.0-2 [79.2 kB] Get:107 http://localhost:3142/debian unstable/main ppc64el libstdc++-15-dev ppc64el 15.2.0-15 [3099 kB] Get:108 http://localhost:3142/debian unstable/main amd64 libuv1t64 amd64 1.51.0-2+b1 [156 kB] Get:109 http://localhost:3142/debian unstable/main amd64 ncbi-data all 6.1.20170106+dfsg2-7 [3540 kB] Get:110 http://localhost:3142/debian unstable/main amd64 ncbi-blast+ amd64 2.17.0+ds-7 [17.0 MB] Preconfiguring packages ... 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Selecting previously unselected package libstdc++-15-dev:ppc64el. Preparing to unpack .../89-libstdc++-15-dev_15.2.0-15_ppc64el.deb ... Unpacking libstdc++-15-dev:ppc64el (15.2.0-15) ... Selecting previously unselected package libuv1t64:amd64. Preparing to unpack .../90-libuv1t64_1.51.0-2+b1_amd64.deb ... Unpacking libuv1t64:amd64 (1.51.0-2+b1) ... Selecting previously unselected package ncbi-data. Preparing to unpack .../91-ncbi-data_6.1.20170106+dfsg2-7_all.deb ... Unpacking ncbi-data (6.1.20170106+dfsg2-7) ... Selecting previously unselected package ncbi-blast+. Preparing to unpack .../92-ncbi-blast+_2.17.0+ds-7_amd64.deb ... Unpacking ncbi-blast+ (2.17.0+ds-7) ... Selecting previously unselected package sbuild-build-depends-main-dummy:ppc64el. Preparing to unpack .../93-sbuild-build-depends-main-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-main-dummy:ppc64el (0.invalid.0) ... Setting up libc-gconv-modules-extra:ppc64el (2.42-13) ... Setting up media-types (14.0.0) ... Setting up libpipeline1:amd64 (1.5.8-2) ... Setting up liblmdb0:amd64 (0.9.31-1+b3) ... Setting up ncbi-data (6.1.20170106+dfsg2-7) ... Setting up bsdextrautils (2.41.3-4) ... Setting up libmagic-mgc (1:5.46-5+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:amd64 (2.15.1+dfsg-2+b1) ... Setting up libc6-ppc64el-cross (2.42-12cross1) ... Setting up libdebhelper-perl (13.31) ... Setting up libsqlite3-0:amd64 (3.46.1-9+b1) ... Setting up libuv1t64:amd64 (1.51.0-2+b1) ... Setting up libmagic1t64:amd64 (1:5.46-5+b1) ... Setting up libnghttp2-14:amd64 (1.68.0-2) ... Setting up gettext-base (0.23.2-1) ... Setting up m4 (1.4.21-1) ... Setting up gcc-16-base:ppc64el (16-20260308-1) ... Setting up file (1:5.46-5+b1) ... Setting up libfakeroot:amd64 (1.37.2-1) ... Setting up libelf1t64:amd64 (0.194-1) ... Setting up gcc-15-powerpc64le-linux-gnu-base:amd64 (15.2.0-13cross1) ... Setting up fakeroot (1.37.2-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up autotools-dev (20240727.1) ... Setting up cpp-15-powerpc64le-linux-gnu (15.2.0-13cross1) ... Setting up libproc2-0:amd64 (2:4.0.4-9+b1) ... Setting up libunistring5:amd64 (1.4.2-1) ... Setting up autopoint (0.23.2-1) ... Setting up libncursesw6:amd64 (6.6+20251231-1) ... Setting up autoconf (2.72-6) ... Setting up libffi8:amd64 (3.5.2-3+b1) ... Setting up dwz (0.16-2) ... Setting up sensible-utils (0.0.26) ... Setting up libuchardet0:amd64 (0.0.8-2+b1) ... Setting up linux-libc-dev-ppc64el-cross (6.19.6-1) ... Setting up procps (2:4.0.4-9+b1) ... Setting up sse4.2-support (27+b1) ... Setting up ncbi-vdb-data (3.2.1+dfsg-2) ... Setting up netbase (6.5) ... Setting up libmbedcrypto16:amd64 (3.6.5-0.1) ... Setting up binutils-powerpc64le-linux-gnu (2.46-3) ... Setting up gcc-15-cross-base (15.2.0-13cross1) ... Setting up gcc-15-base:ppc64el (15.2.0-15) ... Setting up readline-common (8.3-4) ... Setting up cpp-powerpc64le-linux-gnu (4:15.2.0-5) ... Setting up automake (1:1.18.1-4) ... update-alternatives: using /usr/bin/automake-1.18 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up gettext (0.23.2-1) ... Setting up libc6-dev-ppc64el-cross (2.42-12cross1) ... Setting up libtool (2.5.4-9) ... Setting up libquadmath0-ppc64el-cross (15.2.0-13cross1) ... Setting up libgomp1-ppc64el-cross (15.2.0-13cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (22) ... Setting up libmbedx509-7:amd64 (3.6.5-0.1) ... Setting up libitm1-ppc64el-cross (15.2.0-13cross1) ... Setting up libmbedtls21:amd64 (3.6.5-0.1) ... Setting up libreadline8t64:amd64 (8.3-4) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up libatomic1-ppc64el-cross (15.2.0-13cross1) ... Setting up groff-base (1.23.0-10) ... Setting up libgcc-s1-ppc64el-cross (15.2.0-13cross1) ... Setting up libpython3.13-stdlib:amd64 (3.13.12-1) ... Setting up libpython3-stdlib:amd64 (3.13.9-3) ... Setting up python3.13 (3.13.12-1) ... Setting up po-debconf (1.0.22) ... Setting up libncbi-vdb3:amd64 (3.2.1+dfsg-2+b1) ... Setting up libasan8-ppc64el-cross (15.2.0-13cross1) ... Setting up python3 (3.13.9-3) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up liblsan0-ppc64el-cross (15.2.0-13cross1) ... Setting up libtsan2-ppc64el-cross (15.2.0-13cross1) ... Setting up ncbi-blast+ (2.17.0+ds-7) ... Setting up libstdc++6-ppc64el-cross (15.2.0-13cross1) ... Setting up libubsan1-ppc64el-cross (15.2.0-13cross1) ... Setting up debhelper (13.31) ... Setting up libgcc-15-dev-ppc64el-cross (15.2.0-13cross1) ... Setting up libstdc++-15-dev-ppc64el-cross (15.2.0-13cross1) ... Setting up gcc-15-powerpc64le-linux-gnu (15.2.0-13cross1) ... Setting up gcc-powerpc64le-linux-gnu (4:15.2.0-5) ... Setting up g++-15-powerpc64le-linux-gnu (15.2.0-13cross1) ... Setting up g++-powerpc64le-linux-gnu (4:15.2.0-5) ... Setting up crossbuild-essential-ppc64el (12.12) ... Setting up libgcc-s1:ppc64el (16-20260308-1) ... Setting up libc6:ppc64el (2.42-13) ... Setting up libasan8:ppc64el (16-20260308-1) ... Setting up libc6-dev:ppc64el (2.42-13) ... Setting up libtsan2:ppc64el (16-20260308-1) ... Setting up libstdc++6:ppc64el (16-20260308-1) ... Setting up liblsan0:ppc64el (16-20260308-1) ... Setting up libitm1:ppc64el (16-20260308-1) ... Setting up zlib1g:ppc64el (1:1.3.dfsg+really1.3.1-3) ... Setting up libgomp1:ppc64el (16-20260308-1) ... Setting up diamond-aligner:ppc64el (2.1.14-1) ... Setting up libblas3:ppc64el (3.12.1-7+b1) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode Setting up libquadmath0:ppc64el (16-20260308-1) ... Setting up libatomic1:ppc64el (16-20260308-1) ... Setting up libgfortran5:ppc64el (16-20260308-1) ... Setting up libubsan1:ppc64el (16-20260308-1) ... Setting up libblas-dev:ppc64el (3.12.1-7+b1) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so to provide /usr/lib/powerpc64le-linux-gnu/libblas.so (libblas.so-powerpc64le-linux-gnu) in auto mode Setting up liblapack3:ppc64el (3.12.1-7+b1) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode Setting up libgcc-15-dev:ppc64el (15.2.0-15) ... Setting up libstdc++-15-dev:ppc64el (15.2.0-15) ... Setting up liblapack-dev:ppc64el (3.12.1-7+b1) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so (liblapack.so-powerpc64le-linux-gnu) in auto mode Setting up sbuild-build-depends-main-dummy:ppc64el (0.invalid.0) ... Processing triggers for libc-bin (2.42-13) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (ppc64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-32-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.129-1 (2025-03-06) amd64 (x86_64) Toolchain package versions: binutils_2.46-3 dpkg-dev_1.23.7 g++-15_15.2.0-15 gcc-15_15.2.0-15 libc6-dev_2.42-13 libstdc++-15-dev_15.2.0-15 libstdc++-15-dev-ppc64el-cross_15.2.0-13cross1 libstdc++6_16-20260308-1 libstdc++6-ppc64el-cross_15.2.0-13cross1 linux-libc-dev_6.19.6-1 Package versions: apt_3.1.16 apt-utils_3.1.16 autoconf_2.72-6 automake_1:1.18.1-4 autopoint_0.23.2-1 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.8 bash_5.3-2 binutils_2.46-3 binutils-common_2.46-3 binutils-powerpc64le-linux-gnu_2.46-3 binutils-x86-64-linux-gnu_2.46-3 bsdextrautils_2.41.3-4 bsdutils_1:2.41.3-4 build-essential_12.12 bzip2_1.0.8-6+b1 coreutils_9.10-1 cpp_4:15.2.0-5 cpp-15_15.2.0-15 cpp-15-powerpc64le-linux-gnu_15.2.0-13cross1 cpp-15-x86-64-linux-gnu_15.2.0-15 cpp-powerpc64le-linux-gnu_4:15.2.0-5 cpp-x86-64-linux-gnu_4:15.2.0-5 crossbuild-essential-ppc64el_12.12 dash_0.5.12-12 debconf_1.5.92 debhelper_13.31 debian-archive-keyring_2025.1 debianutils_5.23.2 dh-autoreconf_22 dh-strip-nondeterminism_1.15.0-1 diamond-aligner_2.1.14-1 diffutils_1:3.12-1 dpkg_1.23.7 dpkg-dev_1.23.7 dwz_0.16-2 fakeroot_1.37.2-1 file_1:5.46-5+b1 findutils_4.10.0-3 g++_4:15.2.0-5 g++-15_15.2.0-15 g++-15-powerpc64le-linux-gnu_15.2.0-13cross1 g++-15-x86-64-linux-gnu_15.2.0-15 g++-powerpc64le-linux-gnu_4:15.2.0-5 g++-x86-64-linux-gnu_4:15.2.0-5 gcc_4:15.2.0-5 gcc-15_15.2.0-15 gcc-15-base_15.2.0-15 gcc-15-cross-base_15.2.0-13cross1 gcc-15-powerpc64le-linux-gnu_15.2.0-13cross1 gcc-15-powerpc64le-linux-gnu-base_15.2.0-13cross1 gcc-15-x86-64-linux-gnu_15.2.0-15 gcc-16-base_16-20260308-1 gcc-powerpc64le-linux-gnu_4:15.2.0-5 gcc-x86-64-linux-gnu_4:15.2.0-5 gettext_0.23.2-1 gettext-base_0.23.2-1 grep_3.12-1 groff-base_1.23.0-10 gzip_1.13-1 hostname_3.25 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 isa-support_27+b1 libacl1_2.3.2-3 libapt-pkg7.0_3.1.16 libarchive-zip-perl_1.68-1 libasan8_16-20260308-1 libasan8-ppc64el-cross_15.2.0-13cross1 libatomic1_16-20260308-1 libatomic1-ppc64el-cross_15.2.0-13cross1 libattr1_1:2.5.2-4 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1+b1 libbinutils_2.46-3 libblas-dev_3.12.1-7+b1 libblas3_3.12.1-7+b1 libblkid1_2.41.3-4 libbsd0_0.12.2-2+b1 libbz2-1.0_1.0.8-6+b1 libc-bin_2.42-13 libc-dev-bin_2.42-13 libc-gconv-modules-extra_2.42-13 libc6_2.42-13 libc6-dev_2.42-13 libc6-dev-ppc64el-cross_2.42-12cross1 libc6-ppc64el-cross_2.42-12cross1 libcap-ng0_0.9.1-1 libcc1-0_16-20260308-1 libcrypt1_1:4.5.1-1 libctf-nobfd0_2.46-3 libctf0_2.46-3 libdb5.3t64_5.3.28+dfsg2-11 libdebconfclient0_0.282+b2 libdebhelper-perl_13.31 libdpkg-perl_1.23.7 libelf1t64_0.194-1 libexpat1_2.7.4-1 libfakeroot_1.37.2-1 libffi8_3.5.2-3+b1 libfile-stripnondeterminism-perl_1.15.0-1 libgcc-15-dev_15.2.0-15 libgcc-15-dev-ppc64el-cross_15.2.0-13cross1 libgcc-s1_16-20260308-1 libgcc-s1-ppc64el-cross_15.2.0-13cross1 libgdbm-compat4t64_1.26-1+b1 libgdbm6t64_1.26-1+b1 libgfortran5_16-20260308-1 libgmp10_2:6.3.0+dfsg-5+b1 libgomp1_16-20260308-1 libgomp1-ppc64el-cross_15.2.0-13cross1 libgprofng0_2.46-3 libhogweed6t64_3.10.2-1 libhwasan0_16-20260308-1 libisl23_0.27-1+b1 libitm1_16-20260308-1 libitm1-ppc64el-cross_15.2.0-13cross1 libjansson4_2.14-2+b4 liblapack-dev_3.12.1-7+b1 liblapack3_3.12.1-7+b1 liblmdb0_0.9.31-1+b3 liblsan0_16-20260308-1 liblsan0-ppc64el-cross_15.2.0-13cross1 liblz4-1_1.10.0-8 liblzma5_5.8.2-2 libmagic-mgc_1:5.46-5+b1 libmagic1t64_1:5.46-5+b1 libmbedcrypto16_3.6.5-0.1 libmbedtls21_3.6.5-0.1 libmbedx509-7_3.6.5-0.1 libmd0_1.1.0-2+b2 libmount1_2.41.3-4 libmpc3_1.3.1-2+b1 libmpfr6_4.2.2-2+b1 libncbi-vdb3_3.2.1+dfsg-2+b1 libncursesw6_6.6+20251231-1 libnettle8t64_3.10.2-1 libnghttp2-14_1.68.0-2 libpam-modules_1.7.0-5+b1 libpam-modules-bin_1.7.0-5+b1 libpam-runtime_1.7.0-5 libpam0g_1.7.0-5+b1 libpcre2-8-0_10.46-1+b1 libperl5.40_5.40.1-7 libpipeline1_1.5.8-2 libproc2-0_2:4.0.4-9+b1 libpython3-stdlib_3.13.9-3 libpython3.13-minimal_3.13.12-1 libpython3.13-stdlib_3.13.12-1 libquadmath0_16-20260308-1 libquadmath0-ppc64el-cross_15.2.0-13cross1 libreadline8t64_8.3-4 libseccomp2_2.6.0-2+b1 libselinux1_3.9-4+b1 libsemanage-common_3.9-1 libsemanage2_3.9-1+b1 libsepol2_3.9-2 libsframe3_2.46-3 libsmartcols1_2.41.3-4 libsqlite3-0_3.46.1-9+b1 libssl3t64_3.5.5-1 libstdc++-15-dev_15.2.0-15 libstdc++-15-dev-ppc64el-cross_15.2.0-13cross1 libstdc++6_16-20260308-1 libstdc++6-ppc64el-cross_15.2.0-13cross1 libsystemd0_260~rc2-1 libtinfo6_6.6+20251231-1 libtool_2.5.4-9 libtsan2_16-20260308-1 libtsan2-ppc64el-cross_15.2.0-13cross1 libubsan1_16-20260308-1 libubsan1-ppc64el-cross_15.2.0-13cross1 libuchardet0_0.0.8-2+b1 libudev1_260~rc2-1 libunistring5_1.4.2-1 libuuid1_2.41.3-4 libuv1t64_1.51.0-2+b1 libxml2-16_2.15.1+dfsg-2+b1 libxxhash0_0.8.3-2+b1 libzstd1_1.5.7+dfsg-3+b1 linux-libc-dev_6.19.6-1 linux-libc-dev-ppc64el-cross_6.19.6-1 login_1:4.16.0-2+really2.41.3-4 login.defs_1:4.19.3-1 m4_1.4.21-1 make_4.4.1-3 man-db_2.13.1-1 mawk_1.3.4.20260302-1 media-types_14.0.0 mount_2.41.3-4 ncbi-blast+_2.17.0+ds-7 ncbi-data_6.1.20170106+dfsg2-7 ncbi-vdb-data_3.2.1+dfsg-2 ncurses-base_6.6+20251231-1 ncurses-bin_6.6+20251231-1 netbase_6.5 openssl-provider-legacy_3.5.5-1 passwd_1:4.19.3-1 patch_2.8-2 perl_5.40.1-7 perl-base_5.40.1-7 perl-modules-5.40_5.40.1-7 po-debconf_1.0.22 procps_2:4.0.4-9+b1 python3_3.13.9-3 python3-minimal_3.13.9-3 python3.13_3.13.12-1 python3.13-minimal_3.13.12-1 readline-common_8.3-4 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.26 sqv_1.3.0-5 sse4.2-support_27+b1 sysvinit-utils_3.15-6 tar_1.35+dfsg-4 tzdata_2026a-1 util-linux_2.41.3-4 xz-utils_5.8.2-2 zlib1g_1:1.3.dfsg+really1.3.1-3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: proteinortho Binary: proteinortho Architecture: any Version: 6.3.1+dfsg-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://gitlab.com/paulklemm_PHD/proteinortho Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/proteinortho Vcs-Git: https://salsa.debian.org/med-team/proteinortho.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), ncbi-blast+, liblapack-dev | libatlas-base-dev | liblapack.so, diamond-aligner (>= 2.0.10~), procps, debhelper Package-List: proteinortho deb science optional arch=any Checksums-Sha1: 36ddff1bcbf8dde0a19795f74e154e74aadc1705 375988 proteinortho_6.3.1+dfsg.orig.tar.xz d2526cacd7835c2f294f0219e9514a1644f13e78 7248 proteinortho_6.3.1+dfsg-1.debian.tar.xz Checksums-Sha256: 7ce978cf6d33a6f67a3138d7f4cafe3ed5c1dcfbdd70224f1514385df9531679 375988 proteinortho_6.3.1+dfsg.orig.tar.xz ab190de700fdc10752e33b2e0c263f6166a2dfb8d8a119d987a7265b99df61fe 7248 proteinortho_6.3.1+dfsg-1.debian.tar.xz Files: 286e6fd86b91807e92db7e8bd7a3c87c 375988 proteinortho_6.3.1+dfsg.orig.tar.xz ee4d531727d1dc02b1af12b004ed1c99 7248 proteinortho_6.3.1+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmWg1C8RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHolg/8CJZu3mudXnpM0z+TV/H6OgBg+eGm/mkU opYsSgqwFb4k6PwHTa9VA3Zq+liUKDRLBvRyz0olnOff5RhE5t+xys2LMHLj+n4g Maij/jnhq+XbAefm4Z0MFg4LsVH/rrKCn+fWlCV7H4YoKL/QEkbsIebdD4l+7jhV 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dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting proteinortho in /<> dpkg-source: info: unpacking proteinortho_6.3.1+dfsg.orig.tar.xz dpkg-source: info: unpacking proteinortho_6.3.1+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying deb_diamond Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.ppc64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.pxxrwO38p8/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-0de9ce30-5bfb-427b-8de5-7e29be08ecc4 SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa XDG_SESSION_CLASS=user dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -appc64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package proteinortho dpkg-buildpackage: info: source version 6.3.1+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type powerpc64le-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el debian/rules clean dh clean dh_auto_clean make -j1 clean make[1]: Entering directory '/<>' rm -rf src/BUILD test/C*.faa.* test/E.faa.* test/C2.faa.* test/L.faa.* test/M.faa.* rm -rf src/lapack-3.8.0/ make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a dh_auto_build -a make -j1 INSTALL="install --strip-program=true" PKG_CONFIG=powerpc64le-linux-gnu-pkg-config CXX=powerpc64le-linux-gnu-g\+\+ CC=powerpc64le-linux-gnu-gcc make[1]: Entering directory '/<>' CC = powerpc64le-linux-gnu-gcc CCFLAGS = CXX = powerpc64le-linux-gnu-g++ CXXFLAGS = -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security MTUNEARCHFLAGS = LDFLAGS = -Wl,-z,relro -Wl,-z,now LDLIBS = STATIC = FALSE Creating build directory ... [ 10%] Prepare proteinortho_clustering ... [ 20%] Building **proteinortho_clustering** with LAPACK (dynamic linking) powerpc64le-linux-gnu-g++ -std=c++11 -O3 -funroll-loops -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -o src/BUILD/Linux_x86_64/proteinortho_clustering src/proteinortho_clustering.cpp -Wl,-z,relro -Wl,-z,now -llapack -lblas -pthread -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /bin/sh: 1: src/BUILD/Linux_x86_64/proteinortho_clustering: Exec format error ......dynamic linking failed too, now I try dynamic linking without -WL,-whole-archive (this should now work for OSX). powerpc64le-linux-gnu-g++ -std=c++11 -O3 -funroll-loops -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -o src/BUILD/Linux_x86_64/proteinortho_clustering src/proteinortho_clustering.cpp -Wl,-z,relro -Wl,-z,now -llapack -lblas -pthread -lpthread /bin/sh: 3: src/BUILD/Linux_x86_64/proteinortho_clustering: Exec format error ......dynamic linking failed (without -WL,-whole-archive) too too, now I try to openblas. powerpc64le-linux-gnu-g++ -std=c++11 -O3 -funroll-loops -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -o src/BUILD/Linux_x86_64/proteinortho_clustering src/proteinortho_clustering.cpp -Wl,-z,relro -Wl,-z,now -lopenblas -pthread -lpthread /usr/bin/powerpc64le-linux-gnu-ld.bfd: cannot find -lopenblas: No such file or directory collect2: error: ld returned 1 exit status ......last linking failed too too too, now I try to recompile lapack (v.3.8.0) and then compile proteinortho_clustering with dynamic linking. ......[ 33%] Extracting the LAPACK library cd src; tar -xzvf lapack-3.8.0.tar.gz ......[ 66%] Compiling the LAPACK library (using cmake + make) mkdir src/lapack-3.8.0/build; cd src/lapack-3.8.0/build; cmake .. -DCMAKE_CXX_COMPILER=powerpc64le-linux-gnu-g++ > /dev/null; make all -j4 /bin/sh: 10: cd: can't cd to src/lapack-3.8.0/build /bin/sh: 10: cmake: not found E: Build killed with signal TERM after 150 minutes of inactivity -------------------------------------------------------------------------------- Build finished at 2026-03-09T18:31:04Z +------------------------------------------------------------------------------+ | Finished Timed Build Commands | +------------------------------------------------------------------------------+ rm -Rf /<>/ ---------------------------------------------------------- I: Finished running 'rm -Rf /<>/'. Finished processing commands. -------------------------------------------------------------------------------- Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: n/a Build-Time: 9074 Distribution: unstable Fail-Stage: build Foreign Architectures: ppc64el Host Architecture: ppc64el Install-Time: 16 Job: proteinortho_6.3.1+dfsg-1 Machine Architecture: amd64 Package: proteinortho Package-Time: 9103 Source-Version: 6.3.1+dfsg-1 Space: n/a Status: attempted Version: 6.3.1+dfsg-1 -------------------------------------------------------------------------------- Finished at 2026-03-09T18:31:04Z Build needed 02:31:43, no disk space