sbuild (Debian sbuild) 0.81.2+deb11u1 (31 August 2022) on debian-ci-siliconvalley +==============================================================================+ | quicktree 2.5-5 (mipsel) Thu, 30 Mar 2023 09:54:10 +0000 | +==============================================================================+ Package: quicktree Version: 2.5-5 Source Version: 2.5-5 Distribution: unstable Machine Architecture: amd64 Host Architecture: mipsel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-73abe70f-ebc6-41a2-8b94-f10cf06d327e' with '<>' I: NOTICE: Log filtering will replace 'build/quicktree-n1eAxw/resolver-YnPTSz' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [180 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2023-03-30-0809.56-F-2023-03-30-0207.16.pdiff [3731 B] Get:4 http://localhost:3142/debian sid/main Sources T-2023-03-30-0809.56-F-2023-03-30-0207.16.pdiff [3731 B] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2023-03-30-0809.56-F-2023-03-30-0207.16.pdiff [8258 B] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2023-03-30-0809.56-F-2023-03-30-0207.16.pdiff [8258 B] Get:6 http://localhost:3142/debian sid/main mipsel Packages [9029 kB] Fetched 9348 kB in 2s (3859 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: tzdata 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 299 kB of archives. After this operation, 0 B of additional disk space will be used. Get:1 http://localhost:3142/debian sid/main amd64 tzdata all 2023c-2 [299 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 299 kB in 0s (0 B/s) (Reading database ... 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Run 'dpkg-reconfigure tzdata' if you wish to change it. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'quicktree' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/quicktree.git Please use: git clone https://salsa.debian.org/med-team/quicktree.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 46.8 kB of source archives. Get:1 http://localhost:3142/debian sid/main quicktree 2.5-5 (dsc) [2048 B] Get:2 http://localhost:3142/debian sid/main quicktree 2.5-5 (tar) [39.8 kB] Get:3 http://localhost:3142/debian sid/main quicktree 2.5-5 (diff) [4984 B] Fetched 46.8 kB in 0s (908 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/quicktree-n1eAxw/quicktree-2.5' with '<>' I: NOTICE: Log filtering will replace 'build/quicktree-n1eAxw' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), help2man, dh-exec, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mipsel:amd64, libc-dev:mipsel, libstdc++-dev:mipsel Filtered Build-Depends: debhelper-compat (= 13), help2man, dh-exec, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mipsel:amd64, libc-dev:mipsel, libstdc++-dev:mipsel dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [416 B] Get:5 copy:/<>/apt_archive ./ Packages [505 B] Fetched 1878 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-mipsel-linux-gnu bsdextrautils cpp-12-mipsel-linux-gnu cpp-mipsel-linux-gnu cross-config crossbuild-essential-mipsel debhelper dh-autoreconf dh-exec dh-strip-nondeterminism dpkg-cross dwz file g++-12-mipsel-linux-gnu g++-mipsel-linux-gnu gcc-11-base:mipsel gcc-12-base:mipsel gcc-12-cross-base-mipsen gcc-12-mipsel-linux-gnu gcc-12-mipsel-linux-gnu-base gcc-mipsel-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libatomic1:mipsel libatomic1-mipsel-cross libc6:mipsel libc6-dev:mipsel libc6-dev-mipsel-cross libc6-mipsel-cross libcom-err2:mipsel libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:mipsel libcrypt1:mipsel libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:mipsel libgcc-12-dev-mipsel-cross libgcc-s1:mipsel libgcc-s1-mipsel-cross libgomp1:mipsel libgomp1-mipsel-cross libgssapi-krb5-2:mipsel libicu72 libio-string-perl libk5crypto3:mipsel libkeyutils1:mipsel libkrb5-3:mipsel libkrb5support0:mipsel liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:mipsel libnsl2:mipsel libpipeline1 libssl3:mipsel libstdc++-11-dev:mipsel libstdc++-12-dev-mipsel-cross libstdc++6:mipsel libstdc++6-mipsel-cross libsub-override-perl libtirpc-dev:mipsel libtirpc3:mipsel libtool libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mipsel linux-libc-dev-mipsel-cross m4 man-db po-debconf sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-12-locales cpp-12-doc cpp-doc dh-make binutils-multiarch g++-12-multilib-mipsel-linux-gnu gcc-12-doc gcc-12-multilib-mipsel-linux-gnu manpages-dev flex bison gdb-mipsel-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:mipsel libc-l10n:mipsel locales:mipsel libnss-nis:mipsel libnss-nisplus:mipsel manpages-dev:mipsel krb5-doc:mipsel krb5-user:mipsel libstdc++-11-doc:mipsel libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:mipsel libarchive-cpio-perl krb5-locales:mipsel libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-mipsel-linux-gnu bsdextrautils cpp-12-mipsel-linux-gnu cpp-mipsel-linux-gnu cross-config crossbuild-essential-mipsel debhelper dh-autoreconf dh-exec dh-strip-nondeterminism dpkg-cross dwz file g++-12-mipsel-linux-gnu g++-mipsel-linux-gnu gcc-11-base:mipsel gcc-12-base:mipsel gcc-12-cross-base-mipsen gcc-12-mipsel-linux-gnu gcc-12-mipsel-linux-gnu-base gcc-mipsel-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libatomic1:mipsel libatomic1-mipsel-cross libc6:mipsel libc6-dev:mipsel libc6-dev-mipsel-cross libc6-mipsel-cross libcom-err2:mipsel libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:mipsel libcrypt1:mipsel libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:mipsel libgcc-12-dev-mipsel-cross libgcc-s1:mipsel libgcc-s1-mipsel-cross libgomp1:mipsel libgomp1-mipsel-cross libgssapi-krb5-2:mipsel libicu72 libio-string-perl libk5crypto3:mipsel libkeyutils1:mipsel libkrb5-3:mipsel libkrb5support0:mipsel liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:mipsel libnsl2:mipsel libpipeline1 libssl3:mipsel libstdc++-11-dev:mipsel libstdc++-12-dev-mipsel-cross libstdc++6:mipsel libstdc++6-mipsel-cross libsub-override-perl libtirpc-dev:mipsel libtirpc3:mipsel libtool libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mipsel linux-libc-dev-mipsel-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:mipsel sensible-utils ucf 0 upgraded, 92 newly installed, 0 to remove and 0 not upgraded. Need to get 74.0 MB of archives. After this operation, 300 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [928 B] Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-5 [15.4 kB] Get:3 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get:4 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB] Get:5 http://localhost:3142/debian sid/main amd64 libmagic1 amd64 1:5.44-3 [104 kB] Get:6 http://localhost:3142/debian sid/main amd64 file amd64 1:5.44-3 [42.5 kB] Get:7 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-12 [160 kB] Get:8 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:9 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.22.4-10 [916 kB] Get:10 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.38.1-5+b1 [86.6 kB] Get:11 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get:12 http://localhost:3142/debian sid/main amd64 man-db amd64 2.11.2-2 [1386 kB] Get:13 http://localhost:3142/debian sid/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:14 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-3 [287 kB] Get:15 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-3 [332 kB] Get:16 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:17 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:18 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-12 [495 kB] Get:19 http://localhost:3142/debian sid/main amd64 binutils-mipsel-linux-gnu amd64 2.40-2cross2 [2795 kB] Get:20 http://localhost:3142/debian sid/main amd64 gcc-12-mipsel-linux-gnu-base amd64 12.2.0-14cross5 [37.7 kB] Get:21 http://localhost:3142/debian sid/main amd64 cpp-12-mipsel-linux-gnu amd64 12.2.0-14cross5 [8083 kB] Get:22 http://localhost:3142/debian sid/main amd64 cpp-mipsel-linux-gnu amd64 4:12.2.0-4 [3284 B] Get:23 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.20 [16.3 kB] Get:24 http://localhost:3142/debian sid/main amd64 gcc-12-cross-base-mipsen all 12.2.0-14cross5 [33.3 kB] Get:25 http://localhost:3142/debian sid/main amd64 libc6-mipsel-cross all 2.36-8cross2 [950 kB] Get:26 http://localhost:3142/debian sid/main amd64 libgcc-s1-mipsel-cross all 12.2.0-14cross5 [46.0 kB] Get:27 http://localhost:3142/debian sid/main amd64 libgomp1-mipsel-cross all 12.2.0-14cross5 [105 kB] Get:28 http://localhost:3142/debian sid/main amd64 libatomic1-mipsel-cross all 12.2.0-14cross5 [6476 B] Get:29 http://localhost:3142/debian sid/main amd64 libgcc-12-dev-mipsel-cross all 12.2.0-14cross5 [267 kB] Get:30 http://localhost:3142/debian sid/main amd64 gcc-12-mipsel-linux-gnu amd64 12.2.0-14cross5 [15.9 MB] Get:31 http://localhost:3142/debian sid/main amd64 gcc-mipsel-linux-gnu amd64 4:12.2.0-4 [1452 B] Get:32 http://localhost:3142/debian sid/main amd64 libstdc++6-mipsel-cross all 12.2.0-14cross5 [498 kB] Get:33 http://localhost:3142/debian sid/main amd64 linux-libc-dev-mipsel-cross all 6.1.8-1cross2 [1837 kB] Get:34 http://localhost:3142/debian sid/main amd64 libc6-dev-mipsel-cross all 2.36-8cross2 [1417 kB] Get:35 http://localhost:3142/debian sid/main amd64 libstdc++-12-dev-mipsel-cross all 12.2.0-14cross5 [2033 kB] Get:36 http://localhost:3142/debian sid/main amd64 g++-12-mipsel-linux-gnu amd64 12.2.0-14cross5 [9009 kB] Get:37 http://localhost:3142/debian sid/main amd64 g++-mipsel-linux-gnu amd64 4:12.2.0-4 [1176 B] Get:38 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:39 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:40 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get:41 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1.1+b3 [687 kB] Get:42 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:43 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:44 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:45 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b1 [322 kB] Get:46 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:47 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.30-2 [63.4 kB] Get:48 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:49 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:50 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:51 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:52 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.20 [25.8 kB] Get:53 http://localhost:3142/debian sid/main amd64 crossbuild-essential-mipsel all 12.9 [6728 B] Get:54 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB] Get:55 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-5 [517 kB] Get:56 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:57 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:58 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get:59 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:60 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:61 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.188-2.1 [174 kB] Get:62 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1 [109 kB] Get:63 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-12 [1300 kB] Get:64 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:65 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:66 http://localhost:3142/debian sid/main amd64 debhelper all 13.11.4 [942 kB] Get:67 http://localhost:3142/debian sid/main amd64 dh-exec amd64 0.27 [27.8 kB] Get:68 http://localhost:3142/debian sid/main mipsel gcc-11-base mipsel 11.3.0-12 [38.4 kB] Get:69 http://localhost:3142/debian sid/main mipsel gcc-12-base mipsel 12.2.0-14 [37.5 kB] Get:70 http://localhost:3142/debian sid/main amd64 help2man amd64 1.49.3 [198 kB] Get:71 http://localhost:3142/debian sid/main mipsel libgcc-s1 mipsel 12.2.0-14 [45.7 kB] Get:72 http://localhost:3142/debian sid/main mipsel libc6 mipsel 2.36-8 [2264 kB] Get:73 http://localhost:3142/debian sid/main mipsel libatomic1 mipsel 12.2.0-14 [6700 B] Get:74 http://localhost:3142/debian sid/main mipsel linux-libc-dev mipsel 6.1.20-1 [1744 kB] Get:75 http://localhost:3142/debian sid/main mipsel libcrypt1 mipsel 1:4.4.33-2 [113 kB] Get:76 http://localhost:3142/debian sid/main mipsel libcrypt-dev mipsel 1:4.4.33-2 [144 kB] Get:77 http://localhost:3142/debian sid/main mipsel libcom-err2 mipsel 1.47.0-2 [19.4 kB] Get:78 http://localhost:3142/debian sid/main mipsel libkrb5support0 mipsel 1.20.1-1+b1 [31.6 kB] Get:79 http://localhost:3142/debian sid/main mipsel libk5crypto3 mipsel 1.20.1-1+b1 [84.3 kB] Get:80 http://localhost:3142/debian sid/main mipsel libkeyutils1 mipsel 1.6.3-2 [8288 B] Get:81 http://localhost:3142/debian sid/main mipsel libssl3 mipsel 3.0.8-1 [1523 kB] Get:82 http://localhost:3142/debian sid/main mipsel libkrb5-3 mipsel 1.20.1-1+b1 [303 kB] Get:83 http://localhost:3142/debian sid/main mipsel libgssapi-krb5-2 mipsel 1.20.1-1+b1 [117 kB] Get:84 http://localhost:3142/debian sid/main mipsel libtirpc3 mipsel 1.3.3+ds-1 [74.3 kB] Get:85 http://localhost:3142/debian sid/main mipsel libnsl2 mipsel 1.3.0-2 [35.2 kB] Get:86 http://localhost:3142/debian sid/main mipsel libtirpc-dev mipsel 1.3.3+ds-1 [197 kB] Get:87 http://localhost:3142/debian sid/main mipsel libnsl-dev mipsel 1.3.0-2 [69.1 kB] Get:88 http://localhost:3142/debian sid/main mipsel libc6-dev mipsel 2.36-8 [1421 kB] Get:89 http://localhost:3142/debian sid/main mipsel libgomp1 mipsel 12.2.0-14 [107 kB] Get:90 http://localhost:3142/debian sid/main mipsel libgcc-11-dev mipsel 11.3.0-12 [254 kB] Get:91 http://localhost:3142/debian sid/main mipsel libstdc++6 mipsel 12.2.0-14 [541 kB] Get:92 http://localhost:3142/debian sid/main mipsel libstdc++-11-dev mipsel 11.3.0-12 [1970 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 74.0 MB in 0s (176 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 15279 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-5_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.44-3_amd64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.44-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.44-3_amd64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.21-12_amd64.deb ... Unpacking gettext-base (0.21-12) ... 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Setting up libatomic1-mipsel-cross (12.2.0-14cross5) ... Setting up file (1:5.44-3) ... Setting up libyaml-perl (1.30-2) ... Setting up gcc-12-mipsel-linux-gnu-base:amd64 (12.2.0-14cross5) ... Setting up gcc-12-base:mipsel (12.2.0-14) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.20) ... Setting up binutils-mipsel-linux-gnu (2.40-2cross2) ... Setting up libgomp1-mipsel-cross (12.2.0-14cross5) ... Setting up autopoint (0.21-12) ... Setting up autoconf (2.71-3) ... Setting up linux-libc-dev-mipsel-cross (6.1.8-1cross2) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up cpp-12-mipsel-linux-gnu (12.2.0-14cross5) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up libelf1:amd64 (0.188-2.1) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.1+b3) ... Setting up liblocale-gettext-perl (1.07-5) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-12) ... Setting up libc6-dev-mipsel-cross (2.36-8cross2) ... Setting up libtool (2.4.7-5) ... Setting up libgcc-s1-mipsel-cross (12.2.0-14cross5) ... Setting up libgcc-12-dev-mipsel-cross (12.2.0-14cross5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up cpp-mipsel-linux-gnu (4:12.2.0-4) ... Setting up ucf (3.0043+nmu1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up gcc-12-mipsel-linux-gnu (12.2.0-14cross5) ... Setting up libstdc++6-mipsel-cross (12.2.0-14cross5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-mipsel-linux-gnu (4:12.2.0-4) ... Setting up libstdc++-12-dev-mipsel-cross (12.2.0-14cross5) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up debhelper (13.11.4) ... Setting up dh-exec (0.27) ... Setting up g++-12-mipsel-linux-gnu (12.2.0-14cross5) ... Setting up g++-mipsel-linux-gnu (4:12.2.0-4) ... Setting up libxml-simple-perl (2.25-2) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-mipsel (12.9) ... Setting up libgcc-s1:mipsel (12.2.0-14) ... Setting up libc6:mipsel (2.36-8) ... Setting up libstdc++6:mipsel (12.2.0-14) ... Setting up libkeyutils1:mipsel (1.6.3-2) ... Setting up libcrypt1:mipsel (1:4.4.33-2) ... Setting up libcom-err2:mipsel (1.47.0-2) ... Setting up libgomp1:mipsel (12.2.0-14) ... Setting up libkrb5support0:mipsel (1.20.1-1+b1) ... Setting up libatomic1:mipsel (12.2.0-14) ... Setting up libk5crypto3:mipsel (1.20.1-1+b1) ... Setting up libgcc-11-dev:mipsel (11.3.0-12) ... Setting up libcrypt-dev:mipsel (1:4.4.33-2) ... Setting up libssl3:mipsel (3.0.8-1) ... Setting up libkrb5-3:mipsel (1.20.1-1+b1) ... Setting up libgssapi-krb5-2:mipsel (1.20.1-1+b1) ... Setting up libtirpc3:mipsel (1.3.3+ds-1) ... Setting up libtirpc-dev:mipsel (1.3.3+ds-1) ... Setting up libnsl2:mipsel (1.3.0-2) ... Setting up libnsl-dev:mipsel (1.3.0-2) ... Setting up libc6-dev:mipsel (2.36-8) ... Setting up libstdc++-11-dev:mipsel (11.3.0-12) ... Setting up sbuild-build-depends-main-dummy:mipsel (0.invalid.0) ... Processing triggers for libc-bin (2.36-8) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mipsel included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) amd64 (x86_64) Toolchain package versions: binutils_2.40-2 dpkg-dev_1.21.21 g++-11_11.3.0-12 g++-12_12.2.0-14 gcc-11_11.3.0-12 gcc-12_12.2.0-14 libc6-dev_2.36-8 libstdc++-11-dev_11.3.0-12 libstdc++-12-dev_12.2.0-14 libstdc++-12-dev-mipsel-cross_12.2.0-14cross5 libstdc++6_12.2.0-14 libstdc++6-mipsel-cross_12.2.0-14cross5 linux-libc-dev_6.1.20-1 Package versions: adduser_3.132 apt_2.6.0 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-12 autotools-dev_20220109.1 base-files_12.4 base-passwd_3.6.1 bash_5.2.15-2+b1 binutils_2.40-2 binutils-common_2.40-2 binutils-mipsel-linux-gnu_2.40-2cross2 binutils-x86-64-linux-gnu_2.40-2 bsdextrautils_2.38.1-5+b1 bsdutils_1:2.38.1-5+b1 build-essential_12.9 bzip2_1.0.8-5+b1 coreutils_9.1-1 cpp_4:12.2.0-3 cpp-11_11.3.0-12 cpp-12_12.2.0-14 cpp-12-mipsel-linux-gnu_12.2.0-14cross5 cpp-mipsel-linux-gnu_4:12.2.0-4 cross-config_2.6.20 crossbuild-essential-mipsel_12.9 dash_0.5.12-2 debconf_1.5.82 debhelper_13.11.4 debian-archive-keyring_2023.3 debianutils_5.7-0.4 dh-autoreconf_20 dh-exec_0.27 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-4 dpkg_1.21.21 dpkg-cross_2.6.20 dpkg-dev_1.21.21 dwz_0.15-1 e2fsprogs_1.47.0-2 fakeroot_1.31-1.2 file_1:5.44-3 findutils_4.9.0-4 g++_4:12.2.0-3 g++-11_11.3.0-12 g++-12_12.2.0-14 g++-12-mipsel-linux-gnu_12.2.0-14cross5 g++-mipsel-linux-gnu_4:12.2.0-4 gcc_4:12.2.0-3 gcc-11_11.3.0-12 gcc-11-base_11.3.0-12 gcc-12_12.2.0-14 gcc-12-base_12.2.0-14 gcc-12-cross-base-mipsen_12.2.0-14cross5 gcc-12-mipsel-linux-gnu_12.2.0-14cross5 gcc-12-mipsel-linux-gnu-base_12.2.0-14cross5 gcc-9-base_9.5.0-3 gcc-mipsel-linux-gnu_4:12.2.0-4 gettext_0.21-12 gettext-base_0.21-12 gpgv_2.2.40-1.1 grep_3.8-5 groff-base_1.22.4-10 gzip_1.12-1 help2man_1.49.3 hostname_3.23+nmu1 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-3 libapt-pkg6.0_2.6.0 libarchive-zip-perl_1.68-1 libasan6_11.3.0-12 libasan8_12.2.0-14 libatomic1_12.2.0-14 libatomic1-mipsel-cross_12.2.0-14cross5 libattr1_1:2.5.1-4 libaudit-common_1:3.0.9-1 libaudit1_1:3.0.9-1 libbinutils_2.40-2 libblkid1_2.38.1-5+b1 libbz2-1.0_1.0.8-5+b1 libc-bin_2.36-8 libc-dev-bin_2.36-8 libc6_2.36-8 libc6-dev_2.36-8 libc6-dev-mipsel-cross_2.36-8cross2 libc6-mipsel-cross_2.36-8cross2 libcap-ng0_0.8.3-1+b3 libcap2_1:2.66-3 libcc1-0_12.2.0-14 libcom-err2_1.47.0-2 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-2 libcrypt-dev_1:4.4.33-2 libcrypt1_1:4.4.33-2 libctf-nobfd0_2.40-2 libctf0_2.40-2 libdb5.3_5.3.28+dfsg2-1 libdebconfclient0_0.268 libdebhelper-perl_13.11.4 libdebian-dpkgcross-perl_2.6.20 libdpkg-perl_1.21.21 libelf1_0.188-2.1 libext2fs2_1.47.0-2 libfakeroot_1.31-1.2 libffi8_3.4.4-1 libfile-find-rule-perl_0.34-3 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.13.1-1 libfile-which-perl_1.27-2 libgcc-11-dev_11.3.0-12 libgcc-12-dev_12.2.0-14 libgcc-12-dev-mipsel-cross_12.2.0-14cross5 libgcc-s1_12.2.0-14 libgcc-s1-mipsel-cross_12.2.0-14cross5 libgcrypt20_1.10.1-3 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgmp10_2:6.2.1+dfsg1-1.1 libgnutls30_3.7.9-1 libgomp1_12.2.0-14 libgomp1-mipsel-cross_12.2.0-14cross5 libgpg-error0_1.46-1 libgprofng0_2.40-2 libgssapi-krb5-2_1.20.1-1+b1 libhogweed6_3.8.1-2 libicu72_72.1-3 libidn2-0_2.3.3-1+b1 libio-string-perl_1.08-4 libisl23_0.25-1 libitm1_12.2.0-14 libjansson4_2.14-2 libk5crypto3_1.20.1-1+b1 libkeyutils1_1.6.3-2 libkrb5-3_1.20.1-1+b1 libkrb5support0_1.20.1-1+b1 liblocale-gettext-perl_1.07-5 liblsan0_12.2.0-14 liblz4-1_1.9.4-1 liblzma5_5.4.1-0.2 libmagic-mgc_1:5.44-3 libmagic1_1:5.44-3 libmd0_1.0.4-2 libmount1_2.38.1-5+b1 libmpc3_1.3.1-1 libmpfr6_4.2.0-1 libnettle8_3.8.1-2 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnumber-compare-perl_0.03-3 libp11-kit0_0.24.1-2 libpam-modules_1.5.2-6 libpam-modules-bin_1.5.2-6 libpam-runtime_1.5.2-6 libpam0g_1.5.2-6 libpcre2-8-0_10.42-1 libpcre3_2:8.39-15 libperl5.34_5.34.0-5 libperl5.36_5.36.0-7 libpipeline1_1.5.7-1 libquadmath0_12.2.0-14 libseccomp2_2.5.4-1+b3 libselinux1_3.4-1+b5 libsemanage-common_3.4-1 libsemanage2_3.4-1+b5 libsepol2_3.4-2 libsmartcols1_2.38.1-5+b1 libss2_1.47.0-2 libssl3_3.0.8-1 libstdc++-11-dev_11.3.0-12 libstdc++-12-dev_12.2.0-14 libstdc++-12-dev-mipsel-cross_12.2.0-14cross5 libstdc++6_12.2.0-14 libstdc++6-mipsel-cross_12.2.0-14cross5 libsub-override-perl_0.09-4 libsystemd0_252.6-1 libtasn1-6_4.19.0-2 libtext-glob-perl_0.11-3 libtinfo6_6.4-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-5 libtsan0_11.3.0-12 libtsan2_12.2.0-14 libubsan1_12.2.0-14 libuchardet0_0.0.7-1 libudev1_252.6-1 libunistring2_1.0-2 libuuid1_2.38.1-5+b1 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b1 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-2 libxml2_2.9.14+dfsg-1.1+b3 libxxhash0_0.8.1-1 libyaml-perl_1.30-2 libzstd1_1.5.4+dfsg2-5 linux-libc-dev_6.1.20-1 linux-libc-dev-mipsel-cross_6.1.8-1cross2 login_1:4.13+dfsg1-1+b1 logsave_1.47.0-2 m4_1.4.19-3 make_4.3-4.1 man-db_2.11.2-2 mawk_1.3.4.20200120-3.1 mount_2.38.1-5+b1 ncurses-base_6.4-2 ncurses-bin_6.4-2 passwd_1:4.13+dfsg1-1+b1 patch_2.7.6-7 perl_5.36.0-7 perl-base_5.36.0-7 perl-modules-5.34_5.34.0-5 perl-modules-5.36_5.36.0-7 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-1 sensible-utils_0.0.17+nmu1 sysvinit-utils_3.06-2 tar_1.34+dfsg-1.1 tzdata_2023c-2 ucf_3.0043+nmu1 usrmerge_35 util-linux_2.38.1-5+b1 util-linux-extra_2.38.1-5+b1 xz-utils_5.4.1-0.2 zlib1g_1:1.2.13.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: quicktree Binary: quicktree, libquicktree-dev Architecture: any Version: 2.5-5 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: https://github.com/khowe/quicktree/ Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/quicktree Vcs-Git: https://salsa.debian.org/med-team/quicktree.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), help2man, dh-exec Package-List: libquicktree-dev deb libdevel optional arch=any quicktree deb science optional arch=any Checksums-Sha1: 7694e325400b1775b3682b14ada2a8ba301fbd94 39784 quicktree_2.5.orig.tar.gz 81db3b330faed1e46c1a2a8f6ff2b3495dccbce8 4984 quicktree_2.5-5.debian.tar.xz Checksums-Sha256: 731aa845ce3f1f0645bd0df2b54df75f78fce065d6a3ddc47fedf4bdcb11c248 39784 quicktree_2.5.orig.tar.gz 02a06b5185fdfcd3c0acb8ae818489796233ae6aaef39de0980f5d47233683b4 4984 quicktree_2.5-5.debian.tar.xz Files: e7fcd348f16de227383461373565b8de 39784 quicktree_2.5.orig.tar.gz 75cf2eaebab7dc35fdc91eb7edb56868 4984 quicktree_2.5-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEPpmlJvXcwMu/HO6mALrnSzQzafEFAl8tV0wUHG5wYXRyYTk3 NEBnbWFpbC5jb20ACgkQALrnSzQzafFn3BAAgep7LPwPmryv+ceHOMQP4Am6WNjS QkioIMG4WsnBT0BjQROVSJYJzlRPCEZDJ+A5ynaF4xFlsRkwux/d+l8DFMRtYZ+L XGP4igb14qmIRwkedx7gqgV2zg1A7NAukMArcCOzbE+3Pp9RlcfA3jLygly79PHe pZwp0wtVxVyIFdiWVFqxiCPqCRtCMC0Y1FVvKYJhggkXSkrvellYu5VM5hzp4nQ5 BLEb983VIEg83v9/ChDtp+/ZLGSD+n0XZ1p0iyLTRK2aqEj9r9m5tWDEUDS/BPl9 J8q8tcttaVwufE5P1Hp0EC/N/Y12k5H7zxTLsaSvnYpWltkIB15djueOd+/sLyDb d3TL+NWknBhJYyYE6KrPViNW4nwdwi1bfv4mAw0i2OOmhyNgbb9EsdQSWw7mg3pz yONCpGO1yPxGOlkPLRn/ADNq4t+8/+B/hOHX1osnswQF3LK/jUA/QGThzJAJmc2i oqj0vZFZYB3HkNnUYZ49l6hbu9Yyk9i2CeS/OZpTedZW8A+ngwnFOQYy9XAR51VB C1+BZu1n0lrPv6qEK6zn2mh2cc1jmGPRSW8qrwrvfBwZG2k4O7zMB5RHdnFnjOCU kUx3FPkuY5y6ZHgXol4FkKknPqb9+/0RZB6BTadkTY6mlWRGK7zIs0cRC6zi3NRu 0w8XdUPsUh/iA6c= =co68 -----END PGP SIGNATURE----- gpgv: Signature made Fri Aug 7 13:29:48 2020 UTC gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1 gpgv: issuer "npatra974@gmail.com" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./quicktree_2.5-5.dsc: no acceptable signature found dpkg-source: info: extracting quicktree in /<> dpkg-source: info: unpacking quicktree_2.5.orig.tar.gz dpkg-source: info: unpacking quicktree_2.5-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fixMake.patch dpkg-source: info: applying create_lib.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mipsel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-73abe70f-ebc6-41a2-8b94-f10cf06d327e SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -amipsel -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package quicktree dpkg-buildpackage: info: source version 2.5-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-architecture: warning: specified GNU system type mipsel-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mipsel debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean make -j1 clean make[2]: Entering directory '/<>' rm -f ./*.o quicktree make[2]: Leaving directory '/<>' rm -f quicktree.1 make[1]: Leaving directory '/<>' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/quicktree.substvars debian/libquicktree-dev.substvars debian/files rm -fr -- debian/quicktree/ debian/tmp/ debian/libquicktree-dev/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>' sed -i 's/expexted/expected/' src/tree.c sed -i 's/optio\\n/option/' src/quicktree.c dh_auto_build make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=mipsel-linux-gnu-pkg-config CXX=mipsel-linux-gnu-g\+\+ CC=mipsel-linux-gnu-gcc make[2]: Entering directory '/<>' mipsel-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wunused-result -c -I./include -o ./align.o ./src/align.c mipsel-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wunused-result -c -I./include -o ./cluster.o ./src/cluster.c mipsel-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wunused-result -c -I./include -o ./distancemat.o ./src/distancemat.c ./src/distancemat.c: In function ‘read_phylip_DistanceMatrix’: ./src/distancemat.c:389:27: warning: format ‘%d’ expects argument of type ‘int *’, but argument 3 has type ‘unsigned int *’ [-Wformat=] 389 | if (! fscanf( handle, "%d", &size )) | ~^ ~~~~~ | | | | | unsigned int * | int * | %d ./src/distancemat.c:410:11: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 410 | while(c = fgetc(handle)) { | ^ mipsel-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wunused-result -c -I./include -o ./options.o ./src/options.c mipsel-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wunused-result -c -I./include -o ./util.o ./src/util.c mipsel-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wunused-result -c -I./include -o ./sequence.o ./src/sequence.c mipsel-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wunused-result -c -I./include -o ./quicktree.o ./src/quicktree.c mipsel-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wunused-result -c -I./include -o ./buildtree.o ./src/buildtree.c mipsel-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wunused-result -c -I./include -o ./tree.o ./src/tree.c mipsel-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -o quicktree ./align.o ./cluster.o ./distancemat.o ./options.o ./util.o ./sequence.o ./quicktree.o ./buildtree.o ./tree.o -lm ar rc libquicktree.a ./buildtree.o ./cluster.o ./distancemat.o ./options.o ./util.o ./sequence.o ./tree.o make[2]: Leaving directory '/<>' help2man -i debian/quicktree.htm --no-discard-stderr ./quicktree > quicktree.1 make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a rm -f -- debian/quicktree.substvars debian/libquicktree-dev.substvars rm -fr -- debian/.debhelper/generated/quicktree/ debian/quicktree/ debian/tmp/ debian/.debhelper/generated/libquicktree-dev/ debian/libquicktree-dev/ dh_auto_install -a install -m0755 -d /<>/debian/tmp dh_install -a install -m0755 -d debian/quicktree/usr/bin cp --reflink=auto -a ./quicktree debian/quicktree/usr/bin/ install -m0755 -d debian/libquicktree-dev/usr/include/quicktree cp --reflink=auto -a ./include/align.h ./include/aln2dist.h ./include/aln2tree.h ./include/buildtree.h ./include/cluster.h ./include/dist2tree.h ./include/distancemat.h ./include/options.h ./include/sequence.h ./include/tree.h ./include/util.h ./include/version.h debian/libquicktree-dev/usr/include/quicktree/ install -m0755 -d debian/libquicktree-dev/usr/lib/mipsel-linux-gnu cp --reflink=auto -a ./libquicktree.a debian/libquicktree-dev/usr/lib/mipsel-linux-gnu/ dh_installdocs -a install -m0755 -d debian/quicktree/usr/share/doc/quicktree install -p -m0644 debian/copyright debian/quicktree/usr/share/doc/quicktree/copyright install -m0755 -d debian/libquicktree-dev/usr/share/doc/libquicktree-dev install -p -m0644 debian/copyright debian/libquicktree-dev/usr/share/doc/libquicktree-dev/copyright dh_installchangelogs -a install -m0755 -d debian/quicktree/usr/share/doc/quicktree install -p -m0644 debian/.debhelper/generated/quicktree/dh_installchangelogs.dch.trimmed debian/quicktree/usr/share/doc/quicktree/changelog.Debian install -m0755 -d debian/libquicktree-dev/usr/share/doc/libquicktree-dev install -p -m0644 debian/.debhelper/generated/libquicktree-dev/dh_installchangelogs.dch.trimmed debian/libquicktree-dev/usr/share/doc/libquicktree-dev/changelog.Debian dh_installexamples -a install -m0755 -d debian/quicktree/usr/share/doc/quicktree/examples cp --reflink=auto -a ./debian/tests/data/cysprot.stockholm debian/quicktree/usr/share/doc/quicktree/examples dh_installman -a install -m0755 -d debian/quicktree/usr/share/man/man1/ install -p -m0644 ./quicktree.1 debian/quicktree/usr/share/man/man1/quicktree.1 man-recode --to-code UTF-8 --suffix .dh-new debian/quicktree/usr/share/man/man1/quicktree.1 mv debian/quicktree/usr/share/man/man1/quicktree.1.dh-new debian/quicktree/usr/share/man/man1/quicktree.1 chmod 0644 -- debian/quicktree/usr/share/man/man1/quicktree.1 dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a cd debian/quicktree chmod a-x usr/share/doc/quicktree/changelog.Debian usr/share/man/man1/quicktree.1 gzip -9nf usr/share/doc/quicktree/changelog.Debian usr/share/man/man1/quicktree.1 cd '/<>' cd debian/libquicktree-dev chmod a-x usr/share/doc/libquicktree-dev/changelog.Debian gzip -9nf usr/share/doc/libquicktree-dev/changelog.Debian cd '/<>' dh_fixperms -a find debian/quicktree ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/quicktree/usr/share/doc -type f -a -true -a ! -regex 'debian/quicktree/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/quicktree/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/quicktree/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/quicktree -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/quicktree/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/libquicktree-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libquicktree-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libquicktree-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libquicktree-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libquicktree-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libquicktree-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libquicktree-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -a dh_dwz -a dwz -- debian/quicktree/usr/bin/quicktree dh_strip -a install -m0755 -d debian/.debhelper/quicktree/dbgsym-root/usr/lib/debug/.build-id/bf mipsel-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/quicktree/usr/bin/quicktree debian/.debhelper/quicktree/dbgsym-root/usr/lib/debug/.build-id/bf/761e65e57b6d1aee3056dcbe5ce0760a006f2e.debug chmod 0644 -- debian/.debhelper/quicktree/dbgsym-root/usr/lib/debug/.build-id/bf/761e65e57b6d1aee3056dcbe5ce0760a006f2e.debug mipsel-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/quicktree/usr/bin/quicktree mipsel-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/quicktree/dbgsym-root/usr/lib/debug/.build-id/bf/761e65e57b6d1aee3056dcbe5ce0760a006f2e.debug debian/quicktree/usr/bin/quicktree install -m0755 -d debian/.debhelper/quicktree/dbgsym-root/usr/share/doc ln -s quicktree debian/.debhelper/quicktree/dbgsym-root/usr/share/doc/quicktree-dbgsym install -m0755 -d debian/.debhelper/quicktree mipsel-linux-gnu-strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives -R .gnu.lto_\* -R .gnu.debuglto_\* -N __gnu_lto_slim -N __gnu_lto_v1 debian/libquicktree-dev/usr/lib/mipsel-linux-gnu/libquicktree.a dh_makeshlibs -a rm -f debian/quicktree/DEBIAN/shlibs rm -f debian/libquicktree-dev/DEBIAN/shlibs dh_shlibdeps -a install -m0755 -d debian/quicktree/DEBIAN dpkg-shlibdeps -Tdebian/quicktree.substvars debian/quicktree/usr/bin/quicktree dh_installdeb -a install -m0755 -d debian/quicktree/DEBIAN install -m0755 -d debian/libquicktree-dev/DEBIAN dh_gencontrol -a install -m0755 -d debian/quicktree/DEBIAN echo misc:Depends= >> debian/quicktree.substvars echo misc:Pre-Depends= >> debian/quicktree.substvars install -m0755 -d debian/.debhelper/quicktree/dbgsym-root/DEBIAN dpkg-gencontrol -pquicktree -ldebian/changelog -Tdebian/quicktree.substvars -Pdebian/.debhelper/quicktree/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=quicktree-dbgsym "-DDepends=quicktree (= \${binary:Version})" "-DDescription=debug symbols for quicktree" -DBuild-Ids=bf761e65e57b6d1aee3056dcbe5ce0760a006f2e -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/quicktree/dbgsym-root/DEBIAN/control dpkg-gencontrol -pquicktree -ldebian/changelog -Tdebian/quicktree.substvars -Pdebian/quicktree chmod 0644 -- debian/quicktree/DEBIAN/control install -m0755 -d debian/libquicktree-dev/DEBIAN echo misc:Depends= >> debian/libquicktree-dev.substvars echo misc:Pre-Depends= >> debian/libquicktree-dev.substvars dpkg-gencontrol -plibquicktree-dev -ldebian/changelog -Tdebian/libquicktree-dev.substvars -Pdebian/libquicktree-dev dpkg-gencontrol: warning: Depends field of package libquicktree-dev: substitution variable ${shlibs:Depends} used, but is not defined chmod 0644 -- debian/libquicktree-dev/DEBIAN/control dh_md5sums -a install -m0755 -d debian/quicktree/DEBIAN cd debian/quicktree >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/quicktree/DEBIAN/md5sums install -m0755 -d debian/.debhelper/quicktree/dbgsym-root/DEBIAN cd debian/.debhelper/quicktree/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/quicktree/dbgsym-root/DEBIAN/md5sums install -m0755 -d debian/libquicktree-dev/DEBIAN cd debian/libquicktree-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libquicktree-dev/DEBIAN/md5sums dh_builddeb -a dpkg-deb --root-owner-group --build debian/quicktree .. dpkg-deb: building package 'quicktree' in '../quicktree_2.5-5_mipsel.deb'. dpkg-deb --root-owner-group --build debian/.debhelper/quicktree/dbgsym-root .. dpkg-deb: building package 'quicktree-dbgsym' in '../quicktree-dbgsym_2.5-5_mipsel.deb'. dpkg-deb --root-owner-group --build debian/libquicktree-dev .. dpkg-deb: building package 'libquicktree-dev' in '../libquicktree-dev_2.5-5_mipsel.deb'. dpkg-genbuildinfo --build=any -O../quicktree_2.5-5_mipsel.buildinfo dpkg-genchanges --build=any -O../quicktree_2.5-5_mipsel.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2023-03-30T09:54:33Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ quicktree_2.5-5_mipsel.changes: ------------------------------- Format: 1.8 Date: Fri, 07 Aug 2020 16:37:52 +0530 Source: quicktree Binary: libquicktree-dev quicktree quicktree-dbgsym Built-For-Profiles: cross nocheck Architecture: mipsel Version: 2.5-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: libquicktree-dev - Neighbor-Joining algorithm for phylogenies (development) quicktree - Neighbor-Joining algorithm for phylogenies Changes: quicktree (2.5-5) unstable; urgency=medium . * Team Upload. * Add autopkgtests * Install relevant examples * Fix spellings Checksums-Sha1: c4540a4074350b14cc78ce12ad7984e8bd71b631 26680 libquicktree-dev_2.5-5_mipsel.deb d59087672b98696f9e5ae668bb2ad7117a0acc97 43276 quicktree-dbgsym_2.5-5_mipsel.deb a8cdebe9bbae7f1455076ebd9d954db8d6e1b2eb 5617 quicktree_2.5-5_mipsel.buildinfo e6cbb870c0f18f8a4bcbad00d4a53e81c3bff186 21068 quicktree_2.5-5_mipsel.deb Checksums-Sha256: 2dbd9f8d637f11e7084d8cb1e5d5c69ffd1d810d76ea06fa86db8c9bfdb5857d 26680 libquicktree-dev_2.5-5_mipsel.deb 1a0f354b603616b8acc796497e88dcb3cac3effb89257dc0e6742848597ceef4 43276 quicktree-dbgsym_2.5-5_mipsel.deb eb02927c1127c57255a1e66e48ef85ccc6beb68e14637a3d08065e361b4b5864 5617 quicktree_2.5-5_mipsel.buildinfo 0dbf636ea742aba7cff88a39acba3d9e8099e61ea9cd2423487728b1e3ba4264 21068 quicktree_2.5-5_mipsel.deb Files: c83e12ea300c88c7f7ff21121cb7b87a 26680 libdevel optional libquicktree-dev_2.5-5_mipsel.deb c9e3baa6fadb310f6852316c1a52f154 43276 debug optional quicktree-dbgsym_2.5-5_mipsel.deb 33f4856af17f31976a2d9fca7dd2ad85 5617 science optional quicktree_2.5-5_mipsel.buildinfo c0d5613652c5a7625b9e057ba55f30f2 21068 science optional quicktree_2.5-5_mipsel.deb /<>/quicktree_2.5-5_mipsel.changes.new could not be renamed to /<>/quicktree_2.5-5_mipsel.changes: Illegal seek Distribution field may be wrong!!! +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: quicktree Binary: libquicktree-dev quicktree quicktree-dbgsym Architecture: mipsel Version: 2.5-5 Checksums-Md5: c83e12ea300c88c7f7ff21121cb7b87a 26680 libquicktree-dev_2.5-5_mipsel.deb c9e3baa6fadb310f6852316c1a52f154 43276 quicktree-dbgsym_2.5-5_mipsel.deb c0d5613652c5a7625b9e057ba55f30f2 21068 quicktree_2.5-5_mipsel.deb Checksums-Sha1: c4540a4074350b14cc78ce12ad7984e8bd71b631 26680 libquicktree-dev_2.5-5_mipsel.deb d59087672b98696f9e5ae668bb2ad7117a0acc97 43276 quicktree-dbgsym_2.5-5_mipsel.deb e6cbb870c0f18f8a4bcbad00d4a53e81c3bff186 21068 quicktree_2.5-5_mipsel.deb Checksums-Sha256: 2dbd9f8d637f11e7084d8cb1e5d5c69ffd1d810d76ea06fa86db8c9bfdb5857d 26680 libquicktree-dev_2.5-5_mipsel.deb 1a0f354b603616b8acc796497e88dcb3cac3effb89257dc0e6742848597ceef4 43276 quicktree-dbgsym_2.5-5_mipsel.deb 0dbf636ea742aba7cff88a39acba3d9e8099e61ea9cd2423487728b1e3ba4264 21068 quicktree_2.5-5_mipsel.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Thu, 30 Mar 2023 09:54:33 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-12), autotools-dev (= 20220109.1), base-files (= 12.4), base-passwd (= 3.6.1), bash (= 5.2.15-2+b1), binutils (= 2.40-2), binutils-common (= 2.40-2), binutils-x86-64-linux-gnu (= 2.40-2), bsdextrautils (= 2.38.1-5+b1), bsdutils (= 1:2.38.1-5+b1), build-essential (= 12.9), bzip2 (= 1.0.8-5+b1), coreutils (= 9.1-1), cpp (= 4:12.2.0-3), cpp-11 (= 11.3.0-12), cpp-12 (= 12.2.0-14), dash (= 0.5.12-2), debconf (= 1.5.82), debhelper (= 13.11.4), debianutils (= 5.7-0.4), dh-autoreconf (= 20), dh-exec (= 0.27), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.8-4), dpkg (= 1.21.21), dpkg-dev (= 1.21.21), dwz (= 0.15-1), file (= 1:5.44-3), findutils (= 4.9.0-4), g++ (= 4:12.2.0-3), g++-12 (= 12.2.0-14), gcc (= 4:12.2.0-3), gcc-11 (= 11.3.0-12), gcc-11-base (= 11.3.0-12), gcc-12 (= 12.2.0-14), gcc-12-base (= 12.2.0-14), gettext (= 0.21-12), gettext-base (= 0.21-12), grep (= 3.8-5), groff-base (= 1.22.4-10), gzip (= 1.12-1), help2man (= 1.49.3), hostname (= 3.23+nmu1), init-system-helpers (= 1.65.2), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.1-3), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.3.0-12), libasan8 (= 12.2.0-14), libatomic1 (= 12.2.0-14), libattr1 (= 1:2.5.1-4), libaudit-common (= 1:3.0.9-1), libaudit1 (= 1:3.0.9-1), libbinutils (= 2.40-2), libblkid1 (= 2.38.1-5+b1), libbz2-1.0 (= 1.0.8-5+b1), libc-bin (= 2.36-8), libc-dev-bin (= 2.36-8), libc6 (= 2.36-8), libc6-dev (= 2.36-8), libcap-ng0 (= 0.8.3-1+b3), libcap2 (= 1:2.66-3), libcc1-0 (= 12.2.0-14), libcom-err2 (= 1.47.0-2), libcrypt-dev (= 1:4.4.33-2), libcrypt1 (= 1:4.4.33-2), libctf-nobfd0 (= 2.40-2), libctf0 (= 2.40-2), libdb5.3 (= 5.3.28+dfsg2-1), libdebconfclient0 (= 0.268), libdebhelper-perl (= 13.11.4), libdpkg-perl (= 1.21.21), libelf1 (= 0.188-2.1), libfile-find-rule-perl (= 0.34-3), libfile-stripnondeterminism-perl (= 1.13.1-1), libgcc-11-dev (= 11.3.0-12), libgcc-12-dev (= 12.2.0-14), libgcc-s1 (= 12.2.0-14), libgcrypt20 (= 1.10.1-3), libgdbm-compat4 (= 1.23-3), libgdbm6 (= 1.23-3), libgmp10 (= 2:6.2.1+dfsg1-1.1), libgomp1 (= 12.2.0-14), libgpg-error0 (= 1.46-1), libgprofng0 (= 2.40-2), libgssapi-krb5-2 (= 1.20.1-1+b1), libicu72 (= 72.1-3), libisl23 (= 0.25-1), libitm1 (= 12.2.0-14), libjansson4 (= 2.14-2), libk5crypto3 (= 1.20.1-1+b1), libkeyutils1 (= 1.6.3-2), libkrb5-3 (= 1.20.1-1+b1), libkrb5support0 (= 1.20.1-1+b1), liblocale-gettext-perl (= 1.07-5), liblsan0 (= 12.2.0-14), liblz4-1 (= 1.9.4-1), liblzma5 (= 5.4.1-0.2), libmagic-mgc (= 1:5.44-3), libmagic1 (= 1:5.44-3), libmd0 (= 1.0.4-2), libmount1 (= 2.38.1-5+b1), libmpc3 (= 1.3.1-1), libmpfr6 (= 4.2.0-1), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libnumber-compare-perl (= 0.03-3), libpam-modules (= 1.5.2-6), libpam-modules-bin (= 1.5.2-6), libpam-runtime (= 1.5.2-6), libpam0g (= 1.5.2-6), libpcre2-8-0 (= 10.42-1), libperl5.36 (= 5.36.0-7), libpipeline1 (= 1.5.7-1), libquadmath0 (= 12.2.0-14), libseccomp2 (= 2.5.4-1+b3), libselinux1 (= 3.4-1+b5), libsmartcols1 (= 2.38.1-5+b1), libssl3 (= 3.0.8-1), libstdc++-12-dev (= 12.2.0-14), libstdc++6 (= 12.2.0-14), libsub-override-perl (= 0.09-4), libsystemd0 (= 252.6-1), libtext-glob-perl (= 0.11-3), libtinfo6 (= 6.4-2), libtirpc-common (= 1.3.3+ds-1), libtirpc-dev (= 1.3.3+ds-1), libtirpc3 (= 1.3.3+ds-1), libtool (= 2.4.7-5), libtsan0 (= 11.3.0-12), libtsan2 (= 12.2.0-14), libubsan1 (= 12.2.0-14), libuchardet0 (= 0.0.7-1), libudev1 (= 252.6-1), libunistring2 (= 1.0-2), libuuid1 (= 2.38.1-5+b1), libxml2 (= 2.9.14+dfsg-1.1+b3), libzstd1 (= 1.5.4+dfsg2-5), linux-libc-dev (= 6.1.20-1), login (= 1:4.13+dfsg1-1+b1), m4 (= 1.4.19-3), make (= 4.3-4.1), man-db (= 2.11.2-2), mawk (= 1.3.4.20200120-3.1), ncurses-base (= 6.4-2), ncurses-bin (= 6.4-2), patch (= 2.7.6-7), perl (= 5.36.0-7), perl-base (= 5.36.0-7), perl-modules-5.36 (= 5.36.0-7), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-1), sensible-utils (= 0.0.17+nmu1), sysvinit-utils (= 3.06-2), tar (= 1.34+dfsg-1.1), usrmerge (= 35), util-linux (= 2.38.1-5+b1), util-linux-extra (= 2.38.1-5+b1), xz-utils (= 5.4.1-0.2), zlib1g (= 1:1.2.13.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1596798472" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libquicktree-dev_2.5-5_mipsel.deb --------------------------------- new Debian package, version 2.0. size 26680 bytes: control archive=1344 bytes. 1110 bytes, 26 lines control 1029 bytes, 15 lines md5sums Package: libquicktree-dev Source: quicktree Version: 2.5-5 Architecture: mipsel Maintainer: Debian Med Packaging Team Installed-Size: 120 Section: libdevel Priority: optional Homepage: https://github.com/khowe/quicktree/ Description: Neighbor-Joining algorithm for phylogenies (development) QuickTree is an efficient implementation of the Neighbor-Joining algorithm (PMID: 3447015), capable of reconstructing phylogenies from huge alignments in time less than the age of the universe. . QuickTree accepts both distance matrix and multiple-sequence-aligment inputs. The former should be in PHYLIP format. The latter should be in Stockholm format, which is the native alignment format for the Pfam database. Alignments in various formats can be converted to Stockholm format with the sreformat program, which is part of the HMMer package (hmmer.org). . The tress are written to stdout, in the Newick/New-Hampshire format use by PHYLIP and many other programs . This package contains some header files from quicktree that are used by other packages. drwxr-xr-x root/root 0 2020-08-07 11:07 ./ drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/ drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/include/ drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/include/quicktree/ -rw-r--r-- root/root 3691 2019-03-25 14:29 ./usr/include/quicktree/align.h -rw-r--r-- root/root 1845 2019-03-25 14:29 ./usr/include/quicktree/aln2dist.h -rw-r--r-- root/root 1991 2019-03-25 14:29 ./usr/include/quicktree/aln2tree.h -rw-r--r-- root/root 4993 2019-03-25 14:29 ./usr/include/quicktree/buildtree.h -rw-r--r-- root/root 6506 2019-03-25 14:29 ./usr/include/quicktree/cluster.h -rw-r--r-- root/root 1986 2019-03-25 14:29 ./usr/include/quicktree/dist2tree.h -rw-r--r-- root/root 7468 2019-03-25 14:29 ./usr/include/quicktree/distancemat.h -rw-r--r-- root/root 2054 2019-03-25 14:29 ./usr/include/quicktree/options.h -rw-r--r-- root/root 2584 2019-03-25 14:29 ./usr/include/quicktree/sequence.h -rw-r--r-- root/root 14344 2019-03-25 14:29 ./usr/include/quicktree/tree.h -rw-r--r-- root/root 3782 2019-03-25 14:29 ./usr/include/quicktree/util.h -rw-r--r-- root/root 1220 2019-03-25 14:29 ./usr/include/quicktree/version.h drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/lib/ drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/lib/mipsel-linux-gnu/ -rw-r--r-- root/root 51054 2020-08-07 11:07 ./usr/lib/mipsel-linux-gnu/libquicktree.a drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/share/ drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/share/doc/libquicktree-dev/ -rw-r--r-- root/root 499 2020-08-07 11:07 ./usr/share/doc/libquicktree-dev/changelog.Debian.gz -rw-r--r-- root/root 1044 2020-08-07 11:06 ./usr/share/doc/libquicktree-dev/copyright quicktree-dbgsym_2.5-5_mipsel.deb --------------------------------- new Debian package, version 2.0. size 43276 bytes: control archive=536 bytes. 374 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: quicktree-dbgsym Source: quicktree Version: 2.5-5 Auto-Built-Package: debug-symbols Architecture: mipsel Maintainer: Debian Med Packaging Team Installed-Size: 58 Depends: quicktree (= 2.5-5) Section: debug Priority: optional Description: debug symbols for quicktree Build-Ids: bf761e65e57b6d1aee3056dcbe5ce0760a006f2e drwxr-xr-x root/root 0 2020-08-07 11:07 ./ drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/ drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/lib/ drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/lib/debug/.build-id/bf/ -rw-r--r-- root/root 48984 2020-08-07 11:07 ./usr/lib/debug/.build-id/bf/761e65e57b6d1aee3056dcbe5ce0760a006f2e.debug drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/share/ drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-08-07 11:07 ./usr/share/doc/quicktree-dbgsym -> quicktree quicktree_2.5-5_mipsel.deb -------------------------- new Debian package, version 2.0. size 21068 bytes: control archive=1048 bytes. 1026 bytes, 24 lines control 351 bytes, 5 lines md5sums Package: quicktree Version: 2.5-5 Architecture: mipsel Maintainer: Debian Med Packaging Team Installed-Size: 86 Depends: libc6 (>= 2.34) Suggests: hmmer | hmmer2 Section: science Priority: optional Homepage: https://github.com/khowe/quicktree/ Description: Neighbor-Joining algorithm for phylogenies QuickTree is an efficient implementation of the Neighbor-Joining algorithm (PMID: 3447015), capable of reconstructing phylogenies from huge alignments in time less than the age of the universe. . QuickTree accepts both distance matrix and multiple-sequence-aligment inputs. The former should be in PHYLIP format. The latter should be in Stockholm format, which is the native alignment format for the Pfam database. Alignments in various formats can be converted to Stockholm format with the sreformat program, which is part of the HMMer package (hmmer.org). . The tress are written to stdout, in the Newick/New-Hampshire format use by PHYLIP and many other programs drwxr-xr-x root/root 0 2020-08-07 11:07 ./ drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/ drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/bin/ -rwxr-xr-x root/root 70496 2020-08-07 11:07 ./usr/bin/quicktree drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/share/ drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/share/doc/quicktree/ -rw-r--r-- root/root 499 2020-08-07 11:07 ./usr/share/doc/quicktree/changelog.Debian.gz -rw-r--r-- root/root 1044 2020-08-07 11:06 ./usr/share/doc/quicktree/copyright drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/share/doc/quicktree/examples/ -rw-r--r-- root/root 2950 2020-08-07 11:05 ./usr/share/doc/quicktree/examples/cysprot.stockholm drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/share/man/ drwxr-xr-x root/root 0 2020-08-07 11:07 ./usr/share/man/man1/ -rw-r--r-- root/root 586 2020-08-07 11:07 ./usr/share/man/man1/quicktree.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [545 B] Get:5 copy:/<>/apt_archive ./ Packages [632 B] Fetched 2140 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-ipv6-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-ipv6-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:mipsel t1utils unzip 0 upgraded, 127 newly installed, 0 to remove and 0 not upgraded. Need to get 13.7 MB of archives. After this operation, 51.3 MB of additional disk space will be used. 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liblist-compare-perl all 0.55-2 [65.7 kB] Get:86 http://localhost:3142/debian sid/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:87 http://localhost:3142/debian sid/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:88 http://localhost:3142/debian sid/main amd64 liblz1 amd64 1.13-5 [37.7 kB] Get:89 http://localhost:3142/debian sid/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:90 http://localhost:3142/debian sid/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:91 http://localhost:3142/debian sid/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:92 http://localhost:3142/debian sid/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:93 http://localhost:3142/debian sid/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:94 http://localhost:3142/debian sid/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:95 http://localhost:3142/debian sid/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:96 http://localhost:3142/debian sid/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:97 http://localhost:3142/debian sid/main amd64 libmouse-perl amd64 2.5.10-1+b3 [170 kB] Get:98 http://localhost:3142/debian sid/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:99 http://localhost:3142/debian sid/main amd64 libsub-identify-perl amd64 0.14-3 [10.9 kB] Get:100 http://localhost:3142/debian sid/main amd64 libsub-name-perl amd64 0.26-2+b1 [12.6 kB] Get:101 http://localhost:3142/debian sid/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:102 http://localhost:3142/debian sid/main amd64 libpath-tiny-perl all 0.144-1 [56.4 kB] Get:103 http://localhost:3142/debian sid/main amd64 libperlio-gzip-perl amd64 0.20-1+b1 [17.3 kB] Get:104 http://localhost:3142/debian sid/main amd64 libperlio-utf8-strict-perl amd64 0.010-1 [11.4 kB] Get:105 http://localhost:3142/debian sid/main amd64 libproc-processtable-perl amd64 0.634-1+b2 [43.1 kB] Get:106 http://localhost:3142/debian sid/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:107 http://localhost:3142/debian sid/main amd64 libsereal-decoder-perl amd64 5.003+ds-1 [99.5 kB] Get:108 http://localhost:3142/debian sid/main amd64 libsereal-encoder-perl amd64 5.003+ds-1 [102 kB] Get:109 http://localhost:3142/debian sid/main amd64 libsort-versions-perl all 1.62-3 [8928 B] Get:110 http://localhost:3142/debian sid/main amd64 libxs-parse-keyword-perl amd64 0.33-1 [58.4 kB] Get:111 http://localhost:3142/debian sid/main amd64 libsyntax-keyword-try-perl amd64 0.28-1 [28.6 kB] Get:112 http://localhost:3142/debian sid/main amd64 libterm-readkey-perl amd64 2.38-2+b1 [24.5 kB] Get:113 http://localhost:3142/debian sid/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b1 [8404 B] Get:114 http://localhost:3142/debian sid/main amd64 libtext-markdown-discount-perl amd64 0.16-1 [13.0 kB] Get:115 http://localhost:3142/debian sid/main amd64 libtext-xslate-perl amd64 3.5.9-1+b2 [198 kB] Get:116 http://localhost:3142/debian sid/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:117 http://localhost:3142/debian sid/main amd64 libtime-moment-perl amd64 0.44-2+b1 [73.0 kB] Get:118 http://localhost:3142/debian sid/main amd64 libunicode-utf8-perl amd64 0.62-2 [20.2 kB] Get:119 http://localhost:3142/debian sid/main amd64 libwww-mechanize-perl all 2.16-1 [116 kB] Get:120 http://localhost:3142/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB] Get:121 http://localhost:3142/debian sid/main amd64 libyaml-libyaml-perl amd64 0.86+ds-1 [34.4 kB] Get:122 http://localhost:3142/debian sid/main amd64 plzip amd64 1.10-5 [61.9 kB] Get:123 http://localhost:3142/debian sid/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:124 http://localhost:3142/debian sid/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:125 http://localhost:3142/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:126 http://localhost:3142/debian sid/main amd64 unzip amd64 6.0-28 [166 kB] Get:127 http://localhost:3142/debian sid/main amd64 lintian all 2.116.3 [1130 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 13.7 MB in 0s (154 MB/s) Selecting previously unselected package netbase. 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Setting up liblz1:amd64 (1.13-5) ... Setting up libberkeleydb-perl:amd64 (0.64-2+b1) ... Setting up plzip (1.10-5) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-2) ... Setting up libmouse-perl (2.5.10-1+b3) ... Setting up libdata-messagepack-perl (1.02-1+b1) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libclass-method-modifiers-perl (2.14-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:amd64 (0.46-1) ... Setting up libyaml-0-2:amd64 (0.2.5-1) ... Setting up libsub-identify-perl (0.14-3) ... Setting up libcpanel-json-xs-perl:amd64 (4.35-1) ... Setting up libhtml-tagset-perl (3.20-6) ... 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Setting up iso-codes (4.13.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b1) ... Setting up libnet-ssleay-perl:amd64 (1.92-2+b1) ... Setting up libhttp-date-perl (6.05-2) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.15-1) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up libnet-http-perl (6.22-1) ... Setting up libtext-markdown-discount-perl (0.16-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:amd64 (0.008-2) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.113-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:amd64 (3.81-1) ... Setting up gpgconf (2.2.40-1.1) ... Setting up libio-socket-ssl-perl (2.081-2) ... Setting up gpg (2.2.40-1.1) ... Setting up libsub-exporter-perl (0.989-1) ... Setting up libhttp-message-perl (6.44-1) ... Setting up libhtml-form-perl (6.11-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b1) ... Setting up libcgi-pm-perl (4.55-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.58-2) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.68-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.16-1) ... Setting up liblwp-protocol-https-perl (6.10-1) ... Setting up lintian (2.116.3) ... Setting up sbuild-build-depends-lintian-dummy:mipsel (0.invalid.0) ... Processing triggers for libc-bin (2.36-8) ... Processing triggers for man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 1292 Build-Time: 3 Distribution: unstable Foreign Architectures: mipsel Host Architecture: mipsel Install-Time: 8 Job: quicktree_2.5-5 Lintian: pass Machine Architecture: amd64 Package: quicktree Package-Time: 23 Source-Version: 2.5-5 Space: 1292 Status: successful Version: 2.5-5 -------------------------------------------------------------------------------- Finished at 2023-03-30T09:54:33Z Build needed 00:00:23, 1292k disk space