sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | repeatmasker-recon 1.08-7 (mips64el) Mon, 18 Oct 2021 00:18:12 +0000 | +==============================================================================+ Package: repeatmasker-recon Version: 1.08-7 Source Version: 1.08-7 Distribution: unstable Machine Architecture: amd64 Host Architecture: mips64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-18ffae25-c91c-4426-b69d-95058365ff74' with '<>' I: NOTICE: Log filtering will replace 'build/repeatmasker-recon-rTcnLo/resolver-1BJMFJ' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [165 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2021-10-17-2001.17-F-2021-10-17-0801.43.pdiff [25.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2021-10-17-2001.17-F-2021-10-17-0801.43.pdiff [25.6 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2021-10-17-2001.17-F-2021-10-17-0801.43.pdiff [37.8 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2021-10-17-2001.17-F-2021-10-17-0801.43.pdiff [37.8 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main mips64el Packages [8467 kB] Fetched 8823 kB in 4s (2405 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'repeatmasker-recon' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/repeatmasker-recon.git Please use: git clone https://salsa.debian.org/med-team/repeatmasker-recon.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 116 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main repeatmasker-recon 1.08-7 (dsc) [2128 B] Get:2 http://debian.oregonstate.edu/debian unstable/main repeatmasker-recon 1.08-7 (tar) [108 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main repeatmasker-recon 1.08-7 (diff) [5772 B] Fetched 116 kB in 0s (9269 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/repeatmasker-recon-rTcnLo/repeatmasker-recon-1.08' with '<>' I: NOTICE: Log filtering will replace 'build/repeatmasker-recon-rTcnLo' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el Filtered Build-Depends: debhelper-compat (= 13), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [406 B] Get:5 copy:/<>/apt_archive ./ Packages [493 B] Fetched 1856 B in 0s (69.4 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdextrautils build-essential cpp-11-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-11 g++-11-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-11-base:mips64el gcc-11-cross-base-mipsen gcc-11-mips64el-linux-gnuabi64 gcc-11-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libcom-err2:mips64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:mips64el libgcc-11-dev-mips64el-cross libgcc-s1:mips64el libgcc-s1-mips64el-cross libgomp1:mips64el libgomp1-mips64el-cross libgssapi-krb5-2:mips64el libicu67 libio-string-perl libk5crypto3:mips64el libkeyutils1:mips64el libkrb5-3:mips64el libkrb5support0:mips64el liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev libnsl-dev:mips64el libnsl2:mips64el libperl5.32 libpipeline1 libsigsegv2 libssl1.1:mips64el libstdc++-11-dev libstdc++-11-dev:mips64el libstdc++-11-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libtirpc-dev libtirpc-dev:mips64el libtirpc3:mips64el libtool libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db perl perl-modules-5.32 po-debconf rpcsvc-proto sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-11-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-11-multilib gcc-11-doc g++-11-multilib-mips64el-linux-gnuabi64 gcc-11-multilib-mips64el-linux-gnuabi64 manpages-dev flex bison gdb-mips64el-linux-gnuabi64 gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:mips64el libc-l10n:mips64el locales:mips64el libnss-nis:mips64el libnss-nisplus:mips64el glibc-doc manpages-dev:mips64el gnupg git bzr krb5-doc:mips64el krb5-user:mips64el libstdc++-11-doc libstdc++-11-doc:mips64el libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx libidn2-0:mips64el libfile-fcntllock-perl libarchive-cpio-perl krb5-locales:mips64el libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdextrautils build-essential cpp-11-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-11 g++-11-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-11-base:mips64el gcc-11-cross-base-mipsen gcc-11-mips64el-linux-gnuabi64 gcc-11-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libcom-err2:mips64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:mips64el libgcc-11-dev-mips64el-cross libgcc-s1:mips64el libgcc-s1-mips64el-cross libgomp1:mips64el libgomp1-mips64el-cross libgssapi-krb5-2:mips64el libicu67 libio-string-perl libk5crypto3:mips64el libkeyutils1:mips64el libkrb5-3:mips64el libkrb5support0:mips64el liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev libnsl-dev:mips64el libnsl2:mips64el libperl5.32 libpipeline1 libsigsegv2 libssl1.1:mips64el libstdc++-11-dev libstdc++-11-dev:mips64el libstdc++-11-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libtirpc-dev libtirpc-dev:mips64el libtirpc3:mips64el libtool libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db perl perl-modules-5.32 po-debconf rpcsvc-proto sbuild-build-depends-main-dummy:mips64el sensible-utils ucf 0 upgraded, 104 newly installed, 0 to remove and 0 not upgraded. Need to get 254 MB of archives. After this operation, 903 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [920 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.37.2-3 [143 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-7 [935 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.32 all 5.32.1-6 [2824 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.32 amd64 5.32.1-6 [4106 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.32.1-6 [293 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4+b1 [19.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main mips64el gcc-11-base mips64el 11.2.0-9 [205 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.39-3 [69.1 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.21-4 [175 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-5 [204 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.71-2 [343 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.4-2 [819 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.21-4 [510 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mips64el-linux-gnuabi64 amd64 2.37-4cross4 [2447 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.25-2 [104 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.3.2-2 [190 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 rpcsvc-proto amd64 1.4.2-4 [63.1 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.32-4 [2251 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-11-dev amd64 11.2.0-9 [1949 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 g++-11 amd64 11.2.0-9 [49.7 MB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:11.2.0-2 [1636 B] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.9 [1537 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.9 [2153 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.9 [7704 B] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-mips64el-linux-gnuabi64-base amd64 11.2.0-9cross1 [206 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-11-mips64el-linux-gnuabi64 amd64 11.2.0-9cross1 [45.9 MB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mips64el-linux-gnuabi64 amd64 4:11.2.0-2 [16.9 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.18+nmu2 [31.7 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-cross-base-mipsen all 11.2.0-9cross1 [201 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mips64el-cross all 2.32-1cross3 [1316 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-mips64el-cross all 11.2.0-9cross1 [70.1 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mips64el-cross all 11.2.0-9cross1 [92.6 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mips64el-cross all 11.2.0-9cross1 [7360 B] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-11-dev-mips64el-cross all 11.2.0-9cross1 [281 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-mips64el-linux-gnuabi64 amd64 11.2.0-9cross1 [51.6 MB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mips64el-linux-gnuabi64 amd64 4:11.2.0-2 [1476 B] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mips64el-cross all 11.2.0-9cross1 [468 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mips64el-cross all 5.10.46-4cross3 [1460 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mips64el-cross all 2.32-1cross3 [2104 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-11-dev-mips64el-cross all 11.2.0-9cross1 [1990 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 g++-11-mips64el-linux-gnuabi64 amd64 11.2.0-9cross1 [50.1 MB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mips64el-linux-gnuabi64 amd64 4:11.2.0-2 [1188 B] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.12+dfsg-5 [696 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2+b1 [337 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1.1 [19.0 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu2 [30.6 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.18+nmu2 [40.9 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mips64el all 12.9 [6740 B] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.5.2 [192 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-15 [513 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.185-2 [172 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.21-4 [1311 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.5.2 [1056 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-s1 mips64el 11.2.0-9 [69.8 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main mips64el libc6 mips64el 2.32-4 [2550 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main mips64el libatomic1 mips64el 11.2.0-9 [7460 B] Get:86 http://debian.oregonstate.edu/debian unstable/main mips64el linux-libc-dev mips64el 5.14.12-1 [1426 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt1 mips64el 1:4.4.25-2 [95.0 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt-dev mips64el 1:4.4.25-2 [114 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main mips64el libcom-err2 mips64el 1.46.4-1 [75.0 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main mips64el libkrb5support0 mips64el 1.18.3-7 [63.5 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main mips64el libk5crypto3 mips64el 1.18.3-7 [120 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main mips64el libkeyutils1 mips64el 1.6.1-2 [15.0 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main mips64el libssl1.1 mips64el 1.1.1l-1 [1151 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main mips64el libkrb5-3 mips64el 1.18.3-7 [329 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main mips64el libgssapi-krb5-2 mips64el 1.18.3-7 [150 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main mips64el libtirpc3 mips64el 1.3.2-2 [74.4 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main mips64el libnsl2 mips64el 1.3.0-2 [35.5 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main mips64el libtirpc-dev mips64el 1.3.2-2 [199 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main mips64el libnsl-dev mips64el 1.3.0-2 [70.3 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main mips64el libc6-dev mips64el 2.32-4 [2107 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main mips64el libgomp1 mips64el 11.2.0-9 [94.5 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-11-dev mips64el 11.2.0-9 [280 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++6 mips64el 11.2.0-9 [509 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++-11-dev mips64el 11.2.0-9 [1982 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 254 MB in 2s (125 MB/s) Selecting previously unselected package bsdextrautils. 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Setting up cpp-mips64el-linux-gnuabi64 (4:11.2.0-2) ... Setting up libgomp1-mips64el-cross (11.2.0-9cross1) ... Setting up libgcc-s1-mips64el-cross (11.2.0-9cross1) ... Setting up libelf1:amd64 (0.185-2) ... Setting up libxml2:amd64 (2.9.12+dfsg-5) ... Setting up liblocale-gettext-perl (1.07-4+b1) ... Setting up gettext (0.21-4) ... Setting up libatomic1-mips64el-cross (11.2.0-9cross1) ... Setting up libtool (2.4.6-15) ... Setting up m4 (1.4.18-5) ... Setting up perl (5.32.1-6) ... Setting up libc6-dev-mips64el-cross (2.32-1cross3) ... Setting up libgcc-11-dev-mips64el-cross (11.2.0-9cross1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.9) ... Setting up autoconf (2.71-2) ... Setting up libstdc++6-mips64el-cross (11.2.0-9cross1) ... Setting up libstdc++-11-dev:amd64 (11.2.0-9) ... Setting up dwz (0.14-1) ... Setting up groff-base (1.22.4-7) ... Setting up libsub-override-perl (0.09-2) ... Setting up automake (1:1.16.4-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up g++-11 (11.2.0-9) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.5.2) ... Setting up libxml-namespacesupport-perl (1.12-1.1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.20.9) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up dh-autoreconf (20) ... Setting up libxml-sax-base-perl (1.09-1.1) ... Setting up libio-string-perl (1.08-3.1) ... Setting up libstdc++-11-dev-mips64el-cross (11.2.0-9cross1) ... Setting up gcc-11-mips64el-linux-gnuabi64 (11.2.0-9cross1) ... Setting up gcc-mips64el-linux-gnuabi64 (4:11.2.0-2) ... Setting up g++ (4:11.2.0-2) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up build-essential (12.9) ... Setting up g++-11-mips64el-linux-gnuabi64 (11.2.0-9cross1) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up g++-mips64el-linux-gnuabi64 (4:11.2.0-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0134+dfsg-2+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up debhelper (13.5.2) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1.1) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu2) ... Setting up dpkg-cross (2.6.18+nmu2) ... Setting up crossbuild-essential-mips64el (12.9) ... Setting up libgcc-s1:mips64el (11.2.0-9) ... Setting up libc6:mips64el (2.32-4) ... Setting up libstdc++6:mips64el (11.2.0-9) ... Setting up libkeyutils1:mips64el (1.6.1-2) ... Setting up libssl1.1:mips64el (1.1.1l-1) ... Setting up libcrypt1:mips64el (1:4.4.25-2) ... Setting up libcom-err2:mips64el (1.46.4-1) ... Setting up libgomp1:mips64el (11.2.0-9) ... Setting up libkrb5support0:mips64el (1.18.3-7) ... Setting up libatomic1:mips64el (11.2.0-9) ... Setting up libk5crypto3:mips64el (1.18.3-7) ... Setting up libgcc-11-dev:mips64el (11.2.0-9) ... Setting up libcrypt-dev:mips64el (1:4.4.25-2) ... Setting up libkrb5-3:mips64el (1.18.3-7) ... Setting up libgssapi-krb5-2:mips64el (1.18.3-7) ... Setting up libtirpc3:mips64el (1.3.2-2) ... Setting up libtirpc-dev:mips64el (1.3.2-2) ... Setting up libnsl2:mips64el (1.3.0-2) ... Setting up libnsl-dev:mips64el (1.3.0-2) ... Setting up libc6-dev:mips64el (2.32-4) ... Setting up libstdc++-11-dev:mips64el (11.2.0-9) ... Setting up sbuild-build-depends-main-dummy:mips64el (0.invalid.0) ... Processing triggers for libc-bin (2.32-4) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mips64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-17-amd64 #1 SMP Debian 4.19.194-3 (2021-07-18) amd64 (x86_64) Toolchain package versions: binutils_2.37-7 dpkg-dev_1.20.9 g++-11_11.2.0-9 gcc-11_11.2.0-9 libc6-dev_2.32-4 libstdc++-11-dev_11.2.0-9 libstdc++-11-dev-mips64el-cross_11.2.0-9cross1 libstdc++6_11.2.0-9 libstdc++6-mips64el-cross_11.2.0-9cross1 linux-libc-dev_5.14.12-1 Package versions: adduser_3.118 apt_2.3.9 autoconf_2.71-2 automake_1:1.16.4-2 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_12 base-passwd_3.5.52 bash_5.1-3+b2 binutils_2.37-7 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+------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: repeatmasker-recon Binary: repeatmasker-recon Architecture: any Version: 1.08-7 Maintainer: Debian Med Packaging Team Uploaders: Olivier Sallou , Andreas Tille , Nilesh Patra Homepage: https://www.repeatmasker.org/ Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/repeatmasker-recon Vcs-Git: https://salsa.debian.org/med-team/repeatmasker-recon.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13) Package-List: repeatmasker-recon deb science optional arch=any Checksums-Sha1: a91b9f54dc277248c6848c2584531f7538bec3b4 108477 repeatmasker-recon_1.08.orig.tar.gz 9067a8ba2d5ae4c3611aa13ec382e6ca3e1e1ca4 5772 repeatmasker-recon_1.08-7.debian.tar.xz Checksums-Sha256: 699765fa49d18dbfac9f7a82ecd054464b468cb7521abe9c2bd8caccf08ee7d8 108477 repeatmasker-recon_1.08.orig.tar.gz 8f66c4b87e8dabba5daf8696d77a7302982c50697ceb344eeb2ba7cf7806eaa5 5772 repeatmasker-recon_1.08-7.debian.tar.xz Files: 48c5c650a312bc1cc3fdddcfd943deb0 108477 repeatmasker-recon_1.08.orig.tar.gz 0adb4b3fc0d6b1c73c766d75d582daef 5772 repeatmasker-recon_1.08-7.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmFhNW4RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGweA/+Iye7o06OssVgQkE6HeGgc1RvoHRUDE4l ZN/BoE6HYZuiJFHdfTi2a9ca/BgiC4DfhQ2JksiD1yb6H6wtbwXk6MqtUzFPUVxv WQyKxMIW/R35cM5LtI98abKRi+u5RTF0IXP4GHUm82emX84cyNN3RH3ZMesi1JR7 Gophw8pEJqcRwNSgBD5+27VZbFOZ/S8QlYUhSILSPyRH4QVFxEITq+/Um9l0gq4B 4Tiibw6ETHg/i/aWqF63ZVmgxuKCrV23FIp2WNfZcIFVcJjK3LEFLGLbFy20rbHv Ln3e/867m7fTwf4AwfOZCIrnPCw6RBjDvNvbxYgEiNU4BaWmtNPUOJv4X3y3uYH5 mtSRZVii0wX2JDA630h7uK9R2aOVpWmx/yXjTEvBomlh2sb9fQ9tunGEDofAwfN/ Pp0WwBVnqWx7KzZ2qq9UndtBIAj3vbMe5G6q7VeUssXOOOQ8aqQYC+sK3ldhQYZh yxuubInginQ+V7vLeI54VFmZH+YlqyRCutA9MR69EYpspfyzjK3Y/RT9Eg9RhsUt 0VmXdrO5V/tLyAudUAsp4tfIMDjaQ2Yz6R4FQoASCQ8re6JI4N6G55h6/fTbungo 7A6kjTDp7yLaipV+b1JJZyYgwml7jqWmjQANf0ZweFplpTGPz9/s2lN1TajMluZm 0tsre5Ic0SE= =iJn9 -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.dyR9Ij46/trustedkeys.kbx': General error gpgv: Signature made Sat Oct 9 06:23:42 2021 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./repeatmasker-recon_1.08-7.dsc dpkg-source: info: extracting repeatmasker-recon in /<> dpkg-source: info: unpacking repeatmasker-recon_1.08.orig.tar.gz dpkg-source: info: unpacking repeatmasker-recon_1.08-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 0001-udpate-paths.patch dpkg-source: info: applying 0002-fix_binary_name.patch dpkg-source: info: applying 0003-hardening.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mips64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-18ffae25-c91c-4426-b69d-95058365ff74 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -amips64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package repeatmasker-recon dpkg-buildpackage: info: source version 1.08-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type mips64el-linux-gnuabi64 does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mips64el debian/rules clean dh clean --sourcedirectory=src dh_auto_clean -O--sourcedirectory=src cd src && make -j1 clean make[1]: Entering directory '/<>/src' rm -f imagespread eledef eleredef edgeredef famdef *.o *~ *.Addrs *.Counts *.pixie Makefile.bak core imagespread eledef eleredef edgeredef famdef TAGS make[1]: Leaving directory '/<>/src' dh_autoreconf_clean -O--sourcedirectory=src debian/rules override_dh_clean make[1]: Entering directory '/<>' rm -rf bin dh_clean make[1]: Leaving directory '/<>' debian/rules binary-arch dh binary-arch --sourcedirectory=src dh_update_autotools_config -a -O--sourcedirectory=src dh_autoreconf -a -O--sourcedirectory=src dh_auto_configure -a -O--sourcedirectory=src dh_auto_build -a -O--sourcedirectory=src cd src && make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=mips64el-linux-gnuabi64-pkg-config CXX=mips64el-linux-gnuabi64-g\+\+ CC=mips64el-linux-gnuabi64-gcc make[1]: Entering directory '/<>/src' mips64el-linux-gnuabi64-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro imagespread.c -o imagespread In file included from msps.h:4, from imagespread.c:2: seqlist.h: In function ‘GetSeqNames’: seqlist.h:39:16: warning: implicit declaration of function ‘isspace’ [-Wimplicit-function-declaration] 39 | while (isspace(*name_start)) name_start++; | ^~~~~~~ In file included from msps.h:4, from imagespread.c:2: seqlist.h:4:1: note: include ‘’ or provide a declaration of ‘isspace’ 3 | #include "string.h" +++ |+#include 4 | In file included from imagespread.c:2: msps.h: In function ‘scan_msp’: msps.h:116:25: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 3 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:32: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 5 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:36: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 6 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:43: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 8 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:47: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 9 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d In file included from msps.h:4, from imagespread.c:2: seqlist.h: In function ‘GetSeqNames’: seqlist.h:19:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 19 | fgets(line, 255, seq_list); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mips64el-linux-gnuabi64-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro eledef.c -o eledef In file included from msps.h:4, from eledef.c:1: seqlist.h: In function ‘GetSeqNames’: seqlist.h:39:16: warning: implicit declaration of function ‘isspace’ [-Wimplicit-function-declaration] 39 | while (isspace(*name_start)) name_start++; | ^~~~~~~ In file included from msps.h:4, from eledef.c:1: seqlist.h:4:1: note: include ‘’ or provide a declaration of ‘isspace’ 3 | #include "string.h" +++ |+#include 4 | In file included from eledef.c:1: msps.h: In function ‘scan_msp’: msps.h:116:25: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 3 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:32: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 5 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:36: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 6 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:43: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 8 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:47: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 9 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d In file included from msps.h:4, from eledef.c:1: seqlist.h: In function ‘GetSeqNames’: seqlist.h:19:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 19 | fgets(line, 255, seq_list); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ eledef.c: In function ‘main’: eledef.c:95:13: warning: ignoring return value of ‘freopen’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 95 | freopen(ele_name, "w", all_ele);\ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eledef.c:246:7: note: in expansion of macro ‘DUMBBELL’ 246 | DUMBBELL; | ^~~~~~~~ eledef.c:95:13: warning: ignoring return value of ‘freopen’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 95 | freopen(ele_name, "w", all_ele);\ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eledef.c:253:5: note: in expansion of macro ‘DUMBBELL’ 253 | DUMBBELL; | ^~~~~~~~ mips64el-linux-gnuabi64-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro eleredef.c -o eleredef In file included from msps.h:4, from ele.h:1, from eleredef.c:5: seqlist.h: In function ‘GetSeqNames’: seqlist.h:39:16: warning: implicit declaration of function ‘isspace’ [-Wimplicit-function-declaration] 39 | while (isspace(*name_start)) name_start++; | ^~~~~~~ In file included from msps.h:4, from ele.h:1, from eleredef.c:5: seqlist.h:4:1: note: include ‘’ or provide a declaration of ‘isspace’ 3 | #include "string.h" +++ |+#include 4 | In file included from ele.h:1, from eleredef.c:5: msps.h: In function ‘scan_msp’: msps.h:116:25: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 3 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:32: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 5 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:36: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 6 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:43: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 8 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:47: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 9 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d eleredef.c: In function ‘main’: eleredef.c:239:70: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘long unsigned int’ [-Wformat=] 239 | printf("eleredef: Error! Could not allocate memory for img_ptr: %d bytes requested\n", ( MAX_IMG*sizeof(IMAGE_t *) ) ); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int long unsigned int | %ld In file included from msps.h:4, from ele.h:1, from eleredef.c:5: seqlist.h: In function ‘GetSeqNames’: seqlist.h:19:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 19 | fgets(line, 255, seq_list); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mips64el-linux-gnuabi64-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro edgeredef.c -o edgeredef In file included from msps.h:4, from ele.h:1, from edgeredef.c:1: seqlist.h: In function ‘GetSeqNames’: seqlist.h:39:16: warning: implicit declaration of function ‘isspace’ [-Wimplicit-function-declaration] 39 | while (isspace(*name_start)) name_start++; | ^~~~~~~ In file included from msps.h:4, from ele.h:1, from edgeredef.c:1: seqlist.h:4:1: note: include ‘’ or provide a declaration of ‘isspace’ 3 | #include "string.h" +++ |+#include 4 | In file included from ele.h:1, from edgeredef.c:1: msps.h: In function ‘scan_msp’: msps.h:116:25: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 3 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:32: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 5 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:36: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 6 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:43: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 8 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:47: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 9 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d In file included from msps.h:4, from ele.h:1, from edgeredef.c:1: seqlist.h: In function ‘GetSeqNames’: seqlist.h:19:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 19 | fgets(line, 255, seq_list); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ edgeredef.c: In function ‘general_edge_redef’: edgeredef.c:200:5: warning: ignoring return value of ‘system’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 200 | system(command); | ^~~~~~~~~~~~~~~ mips64el-linux-gnuabi64-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro famdef.c -o famdef In file included from msps.h:4, from ele.h:1, from famdef.c:1: seqlist.h: In function ‘GetSeqNames’: seqlist.h:39:16: warning: implicit declaration of function ‘isspace’ [-Wimplicit-function-declaration] 39 | while (isspace(*name_start)) name_start++; | ^~~~~~~ In file included from msps.h:4, from ele.h:1, from famdef.c:1: seqlist.h:4:1: note: include ‘’ or provide a declaration of ‘isspace’ 3 | #include "string.h" +++ |+#include 4 | In file included from ele.h:1, from famdef.c:1: msps.h: In function ‘scan_msp’: msps.h:116:25: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 3 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:32: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 5 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:36: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 6 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:43: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 8 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d msps.h:116:47: warning: format ‘%ld’ expects argument of type ‘long int *’, but argument 9 has type ‘int32_t *’ {aka ‘int *’} [-Wformat=] 116 | if (sscanf(line, "%ld %f %ld %ld %s %ld %ld %s \n", &(m->score), &(m->iden), &(m->query.frag.lb), &(m->query.frag.rb), qname, &(m->sbjct.frag.lb), &(m->sbjct.frag.rb), sname) != 8) { | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long int * int32_t * {aka int *} | %d In file included from msps.h:4, from ele.h:1, from famdef.c:1: seqlist.h: In function ‘GetSeqNames’: seqlist.h:19:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 19 | fgets(line, 255, seq_list); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/<>/src' create-stamp debian/debhelper-build-stamp dh_testroot -a -O--sourcedirectory=src dh_prep -a -O--sourcedirectory=src debian/rules execute_before_dh_auto_install make[1]: Entering directory '/<>' mkdir -p bin make[1]: Leaving directory '/<>' dh_auto_install --destdir=debian/repeatmasker-recon/ -a -O--sourcedirectory=src cd src && make -j1 install DESTDIR=/<>/debian/repeatmasker-recon AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/src' cp imagespread eledef eleredef edgeredef famdef ../bin/ make[1]: Leaving directory '/<>/src' dh_install -a -O--sourcedirectory=src debian/rules execute_after_dh_install make[1]: Entering directory '/<>' cp scripts/recon.pl debian/repeatmasker-recon/usr/bin/repeatmasker-recon cp scripts/MSPCollect.pl debian/repeatmasker-recon/usr/bin/MSPCollect make[1]: Leaving directory '/<>' dh_installdocs -a -O--sourcedirectory=src dh_installchangelogs -a -O--sourcedirectory=src dh_installexamples -a -O--sourcedirectory=src dh_installman -a -O--sourcedirectory=src dh_installsystemduser -a -O--sourcedirectory=src dh_perl -a -O--sourcedirectory=src dh_link -a -O--sourcedirectory=src dh_strip_nondeterminism -a -O--sourcedirectory=src dh_compress -a -O--sourcedirectory=src dh_fixperms -a -O--sourcedirectory=src dh_missing -a -O--sourcedirectory=src dh_dwz -a -O--sourcedirectory=src dh_strip -a -O--sourcedirectory=src dh_makeshlibs -a -O--sourcedirectory=src dh_shlibdeps -a -O--sourcedirectory=src dh_installdeb -a -O--sourcedirectory=src dh_gencontrol -a -O--sourcedirectory=src dh_md5sums -a -O--sourcedirectory=src dh_builddeb -a -O--sourcedirectory=src dpkg-deb: building package 'repeatmasker-recon' in '../repeatmasker-recon_1.08-7_mips64el.deb'. dpkg-deb: building package 'repeatmasker-recon-dbgsym' in '../repeatmasker-recon-dbgsym_1.08-7_mips64el.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../repeatmasker-recon_1.08-7_mips64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2021-10-18T00:19:19Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ repeatmasker-recon_1.08-7_mips64el.changes: ------------------------------------------- Format: 1.8 Date: Sat, 09 Oct 2021 08:21:33 +0200 Source: repeatmasker-recon Binary: repeatmasker-recon repeatmasker-recon-dbgsym Built-For-Profiles: cross nocheck Architecture: mips64el Version: 1.08-7 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: repeatmasker-recon - finds repeat families from biological sequences Changes: repeatmasker-recon (1.08-7) unstable; urgency=medium . * Fix watch file * Standards-Version: 4.6.0 (routine-update) * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target (routine- update) * Remove trailing whitespace in debian/rules (routine-update) Checksums-Sha1: 29c80a8152f516d9d95e34ce81266a80b76a27bd 114456 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+------------------------------------------------------------------------------+ Format: 1.0 Source: repeatmasker-recon Binary: repeatmasker-recon repeatmasker-recon-dbgsym Architecture: mips64el Version: 1.08-7 Checksums-Md5: c9a2f6c2e7a98e281306296f443c2d08 114456 repeatmasker-recon-dbgsym_1.08-7_mips64el.deb c2c8b018349acc694b03fffadd2daa8f 86896 repeatmasker-recon_1.08-7_mips64el.deb Checksums-Sha1: 29c80a8152f516d9d95e34ce81266a80b76a27bd 114456 repeatmasker-recon-dbgsym_1.08-7_mips64el.deb 8f6d7c4985a2eebc2e51cd5406f1214aece8edcf 86896 repeatmasker-recon_1.08-7_mips64el.deb Checksums-Sha256: 00abf7e6bc0628045cf28e83746a81c9d90fcadf434e2432f0d98ed00d7e8252 114456 repeatmasker-recon-dbgsym_1.08-7_mips64el.deb 3c3d09b9f605c108416aaaa984a056a0cdf3b0be76c0d491b871f80eb916d91d 86896 repeatmasker-recon_1.08-7_mips64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Mon, 18 Oct 2021 00:19:18 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.71-2), automake (= 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11.2.0-9), libk5crypto3 (= 1.18.3-7), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.18.3-7), libkrb5support0 (= 1.18.3-7), liblsan0 (= 11.2.0-9), liblz4-1 (= 1.9.3-2), liblzma5 (= 5.2.5-2), libmagic-mgc (= 1:5.39-3), libmagic1 (= 1:5.39-3), libmount1 (= 2.37.2-3), libmpc3 (= 1.2.1-1), libmpfr6 (= 4.1.0-3), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libpam-modules (= 1.4.0-10), libpam-modules-bin (= 1.4.0-10), libpam-runtime (= 1.4.0-10), libpam0g (= 1.4.0-10), libpcre2-8-0 (= 10.36-2), libpcre3 (= 2:8.39-13), libperl5.32 (= 5.32.1-6), libpipeline1 (= 1.5.3-1), libquadmath0 (= 11.2.0-9), libseccomp2 (= 2.5.2-2), libselinux1 (= 3.1-3), libsigsegv2 (= 2.13-1), libsmartcols1 (= 2.37.2-3), libssl1.1 (= 1.1.1l-1), libstdc++-11-dev (= 11.2.0-9), libstdc++6 (= 11.2.0-9), libsub-override-perl (= 0.09-2), libsystemd0 (= 249.5-1), libtinfo6 (= 6.2+20210905-1), libtirpc-common (= 1.3.2-2), libtirpc-dev (= 1.3.2-2), libtirpc3 (= 1.3.2-2), libtool (= 2.4.6-15), libtsan0 (= 11.2.0-9), libubsan1 (= 11.2.0-9), libuchardet0 (= 0.0.7-1), libudev1 (= 249.5-1), libunistring2 (= 0.9.10-6), libuuid1 (= 2.37.2-3), libxml2 (= 2.9.12+dfsg-5), libzstd1 (= 1.4.8+dfsg-3), linux-libc-dev (= 5.14.12-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-5), make (= 4.3-4.1), man-db (= 2.9.4-2), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2+20210905-1), ncurses-bin (= 6.2+20210905-1), patch (= 2.7.6-7), perl (= 5.32.1-6), perl-base (= 5.32.1-6), perl-modules-5.32 (= 5.32.1-6), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.2-4), sed (= 4.8-1), sensible-utils (= 0.0.17), sysvinit-utils (= 3.00-1), tar (= 1.34+dfsg-1), util-linux (= 2.37.2-3), xz-utils (= 5.2.5-2), zlib1g (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1633760493" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ repeatmasker-recon-dbgsym_1.08-7_mips64el.deb --------------------------------------------- new Debian package, version 2.0. size 114456 bytes: control archive=816 bytes. 579 bytes, 12 lines control 632 bytes, 6 lines md5sums Package: repeatmasker-recon-dbgsym Source: repeatmasker-recon Version: 1.08-7 Auto-Built-Package: debug-symbols Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 181 Depends: repeatmasker-recon (= 1.08-7) Section: debug Priority: optional Description: debug symbols for repeatmasker-recon Build-Ids: 1e6cbc49879bda25d7e5c21841975671c95ac949 4d9176ac6554bb657c5dec7036b8f29bbe89a3c3 84263049a5f4e323234ec87dd5bf3d2ae27c72ba 8880f7e9f1e1a3df70df2c3747dc38da5ffb380b cd1c9e62c847fda604f6bcebe263817835b590e8 drwxr-xr-x root/root 0 2021-10-09 06:21 ./ drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/ drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/lib/ drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/lib/debug/ drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/lib/debug/.build-id/1e/ -rw-r--r-- root/root 14288 2021-10-09 06:21 ./usr/lib/debug/.build-id/1e/6cbc49879bda25d7e5c21841975671c95ac949.debug drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/lib/debug/.build-id/4d/ -rw-r--r-- root/root 21632 2021-10-09 06:21 ./usr/lib/debug/.build-id/4d/9176ac6554bb657c5dec7036b8f29bbe89a3c3.debug drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/lib/debug/.build-id/84/ -rw-r--r-- root/root 36904 2021-10-09 06:21 ./usr/lib/debug/.build-id/84/263049a5f4e323234ec87dd5bf3d2ae27c72ba.debug drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/lib/debug/.build-id/88/ -rw-r--r-- root/root 55200 2021-10-09 06:21 ./usr/lib/debug/.build-id/88/80f7e9f1e1a3df70df2c3747dc38da5ffb380b.debug drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/lib/debug/.build-id/cd/ -rw-r--r-- root/root 33744 2021-10-09 06:21 ./usr/lib/debug/.build-id/cd/1c9e62c847fda604f6bcebe263817835b590e8.debug drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/lib/debug/.dwz/mips64el-linux-gnuabi64/ -rw-r--r-- root/root 4456 2021-10-09 06:21 ./usr/lib/debug/.dwz/mips64el-linux-gnuabi64/repeatmasker-recon.debug drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/share/ drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/share/doc/ lrwxrwxrwx root/root 0 2021-10-09 06:21 ./usr/share/doc/repeatmasker-recon-dbgsym -> repeatmasker-recon repeatmasker-recon_1.08-7_mips64el.deb -------------------------------------- new Debian package, version 2.0. size 86896 bytes: control archive=1508 bytes. 1128 bytes, 23 lines control 1580 bytes, 22 lines md5sums Package: repeatmasker-recon Version: 1.08-7 Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 481 Depends: libc6 (>= 2.7), perl:any Section: science Priority: optional Homepage: https://www.repeatmasker.org/ Description: finds repeat families from biological sequences The RECON package implements a de novo algorithm for the identification of repeat families from biological sequences. . The program implements an approach for the de novo identification and classification of repeat sequence families that is based on extensions to the usual approach of single linkage clustering of local pairwise alignments between genomic sequences. The extensions use multiple alignment information to define the boundaries of individual copies of the repeats and to distinguish homologous but distinct repeat element families. When tested on the human genome, this approach was able to properly identify and group known transposable elements. The program, should be useful for first-pass automatic classification of repeats in newly sequenced genomes. drwxr-xr-x root/root 0 2021-10-09 06:21 ./ drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/ drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/bin/ -rwxr-xr-x root/root 1370 2021-10-09 06:21 ./usr/bin/MSPCollect -rwxr-xr-x root/root 38584 2021-10-09 06:21 ./usr/bin/edgeredef -rwxr-xr-x root/root 19824 2021-10-09 06:21 ./usr/bin/eledef -rwxr-xr-x root/root 52520 2021-10-09 06:21 ./usr/bin/eleredef -rwxr-xr-x root/root 34128 2021-10-09 06:21 ./usr/bin/famdef -rwxr-xr-x root/root 15520 2021-10-09 06:21 ./usr/bin/imagespread -rwxr-xr-x root/root 1841 2021-10-09 06:21 ./usr/bin/repeatmasker-recon drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/share/ drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/share/doc/repeatmasker-recon/ -rw-r--r-- root/root 2135 2021-10-09 06:21 ./usr/share/doc/repeatmasker-recon/00README.gz -rw-r--r-- root/root 985 2021-10-09 06:21 ./usr/share/doc/repeatmasker-recon/changelog.Debian.gz -rw-r--r-- root/root 1911 2021-10-09 06:21 ./usr/share/doc/repeatmasker-recon/copyright drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/share/doc/repeatmasker-recon/examples/ drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/share/doc/repeatmasker-recon/examples/Demos/ -rw-r--r-- root/root 1663 2021-10-09 06:21 ./usr/share/doc/repeatmasker-recon/examples/Demos/README drwxr-xr-x root/root 0 2014-02-05 22:05 ./usr/share/doc/repeatmasker-recon/examples/Demos/input/ -rw-r--r-- root/root 290374 2014-02-05 22:05 ./usr/share/doc/repeatmasker-recon/examples/Demos/input/elegans.msps -rw-r--r-- root/root 36 2014-02-05 22:05 ./usr/share/doc/repeatmasker-recon/examples/Demos/input/seqnames drwxr-xr-x root/root 0 2014-02-05 22:05 ./usr/share/doc/repeatmasker-recon/examples/Demos/output/ drwxr-xr-x root/root 0 2014-02-05 22:05 ./usr/share/doc/repeatmasker-recon/examples/Demos/standard/ -rw-r--r-- root/root 806 2014-02-05 22:05 ./usr/share/doc/repeatmasker-recon/examples/Demos/standard/Tc3.list -rw-r--r-- root/root 1514 2014-02-05 22:05 ./usr/share/doc/repeatmasker-recon/examples/Demos/standard/Tc3.msps drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/share/man/ drwxr-xr-x root/root 0 2021-10-09 06:21 ./usr/share/man/man1/ -rw-r--r-- root/root 487 2021-10-09 06:21 ./usr/share/man/man1/MSPCollect.1.gz -rw-r--r-- root/root 385 2021-10-09 06:21 ./usr/share/man/man1/edgeredef.1.gz -rw-r--r-- root/root 373 2021-10-09 06:21 ./usr/share/man/man1/eledef.1.gz -rw-r--r-- root/root 408 2021-10-09 06:21 ./usr/share/man/man1/eleredef.1.gz -rw-r--r-- root/root 339 2021-10-09 06:21 ./usr/share/man/man1/famdef.1.gz -rw-r--r-- root/root 374 2021-10-09 06:21 ./usr/share/man/man1/imagespread.1.gz -rw-r--r-- root/root 711 2021-10-09 06:21 ./usr/share/man/man1/repeatmasker-recon.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [535 B] Get:5 copy:/<>/apt_archive ./ Packages [621 B] Fetched 2119 B in 0s (77.9 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libwww-perl binutils-multiarch libtext-template-perl zip Recommended packages: gnupg liblist-someutils-xs-perl libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils sbuild-build-depends-lintian-dummy:mips64el t1utils unzip 0 upgraded, 95 newly installed, 0 to remove and 0 not upgraded. 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Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.64-1 [36.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.5-1 [51.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.27-2 [547 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.36.0-2 [815 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.27-2 [927 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libaliased-perl all 0.34-1.1 [14.1 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.40 [72.2 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b3 [11.3 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1.1 [12.7 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b2 [15.9 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b3 [25.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1.1 [12.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b3 [45.7 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.25-1 [19.5 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b7 [38.1 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1+b1 [15.4 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-tiny-perl all 2.27-1 [17.1 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-util-perl amd64 1.102-1+b1 [25.6 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-install-perl all 0.928-1.1 [10.8 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-optlist-perl all 0.112-1 [11.8 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-perl all 0.988-1 [51.9 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libconst-fast-perl all 0.014-1.1 [8552 B] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.27-1 [129 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-perl all 0.03+ds1-1.1 [18.4 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-1.1 [13.7 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002002-1 [37.8 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-xs-perl amd64 0.430-2 [40.9 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-messagepack-perl amd64 1.01-2 [35.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1.1 [33.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b2 [26.1 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-address-xs-perl amd64 1.04-1+b3 [28.0 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.09-1 [16.4 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1.1 [6956 B] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.11-1 [8888 B] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1.1 [318 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-html5-entities-perl all 0.004-1.1 [21.3 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libio-interactive-perl all 1.023-1 [11.5 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libio-prompt-tiny-perl all 0.003-1 [9150 B] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004003-1 [13.1 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-someutils-perl all 0.58-1 [36.5 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-utilsby-perl all 0.11-1 [15.4 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.005004-2 [60.4 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1.1 [10.8 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libmouse-perl amd64 2.5.10-1+b1 [172 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.39-1 [21.9 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b3 [12.0 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1+b1 [13.8 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.118-1 [53.5 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-gzip-perl amd64 0.19-1+b7 [17.4 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-utf8-strict-perl amd64 0.008-1+b1 [12.0 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libproc-processtable-perl amd64 0.634-1 [46.5 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.018+ds-1+b1 [99.3 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.018+ds-1+b1 [103 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libsort-versions-perl all 1.62-1 [11.0 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libterm-readkey-perl amd64 2.38-1+b2 [27.8 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-4+b8 [8724 B] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.13-1 [13.2 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.8-1+b1 [197 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b3 [75.8 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.012004-1 [351 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b2 [20.3 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 5.08-1 [90.6 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.83+ds-1 [35.5 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.22-4 [88.2 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-26 [171 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.109.0 [1338 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7599 kB in 0s (27.1 MB/s) Selecting previously unselected package diffstat. (Reading database ... 20308 files and directories currently installed.) Preparing to unpack .../00-diffstat_1.64-1_amd64.deb ... Unpacking diffstat (1.64-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../01-libassuan0_2.5.5-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.5-1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../02-gpgconf_2.2.27-2_amd64.deb ... Unpacking gpgconf (2.2.27-2) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../03-libsqlite3-0_3.36.0-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.36.0-2) ... Selecting previously unselected package gpg. Preparing to unpack .../04-gpg_2.2.27-2_amd64.deb ... Unpacking gpg (2.2.27-2) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../05-libaliased-perl_0.34-1.1_all.deb ... Unpacking libaliased-perl (0.34-1.1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../06-libapt-pkg-perl_0.1.40_amd64.deb ... Unpacking libapt-pkg-perl (0.1.40) ... Selecting previously unselected package libb-hooks-op-check-perl. Preparing to unpack .../07-libb-hooks-op-check-perl_0.22-1+b3_amd64.deb ... Unpacking libb-hooks-op-check-perl (0.22-1+b3) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../08-libdynaloader-functions-perl_0.003-1.1_all.deb ... Unpacking libdynaloader-functions-perl (0.003-1.1) ... Selecting previously unselected package libdevel-callchecker-perl. Preparing to unpack .../09-libdevel-callchecker-perl_0.008-1+b2_amd64.deb ... Unpacking libdevel-callchecker-perl (0.008-1+b2) ... Selecting previously unselected package libparams-classify-perl. Preparing to unpack .../10-libparams-classify-perl_0.015-1+b3_amd64.deb ... Unpacking libparams-classify-perl (0.015-1+b3) ... Selecting previously unselected package libmodule-runtime-perl. 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Selecting previously unselected package libconst-fast-perl. Preparing to unpack .../27-libconst-fast-perl_0.014-1.1_all.deb ... Unpacking libconst-fast-perl (0.014-1.1) ... Selecting previously unselected package libcpanel-json-xs-perl:amd64. Preparing to unpack .../28-libcpanel-json-xs-perl_4.27-1_amd64.deb ... Unpacking libcpanel-json-xs-perl:amd64 (4.27-1) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../29-libdevel-stacktrace-perl_2.0400-1_all.deb ... Unpacking libdevel-stacktrace-perl (2.0400-1) ... Selecting previously unselected package libexception-class-perl. Preparing to unpack .../30-libexception-class-perl_1.45-1_all.deb ... Unpacking libexception-class-perl (1.45-1) ... Selecting previously unselected package libiterator-perl. Preparing to unpack .../31-libiterator-perl_0.03+ds1-1.1_all.deb ... Unpacking libiterator-perl (0.03+ds1-1.1) ... Selecting previously unselected package libiterator-util-perl. 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Unpacking libdata-messagepack-perl (1.01-2) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../38-libnet-domain-tld-perl_1.75-1.1_all.deb ... Unpacking libnet-domain-tld-perl (1.75-1.1) ... Selecting previously unselected package libdata-validate-domain-perl. Preparing to unpack .../39-libdata-validate-domain-perl_0.10-1.1_all.deb ... Unpacking libdata-validate-domain-perl (0.10-1.1) ... Selecting previously unselected package libdevel-size-perl. Preparing to unpack .../40-libdevel-size-perl_0.83-1+b2_amd64.deb ... Unpacking libdevel-size-perl (0.83-1+b2) ... Selecting previously unselected package libemail-address-xs-perl. Preparing to unpack .../41-libemail-address-xs-perl_1.04-1+b3_amd64.deb ... Unpacking libemail-address-xs-perl (1.04-1+b3) ... Selecting previously unselected package libipc-system-simple-perl. Preparing to unpack .../42-libipc-system-simple-perl_1.30-1_all.deb ... Unpacking libipc-system-simple-perl (1.30-1) ... Selecting previously unselected package libfile-basedir-perl. Preparing to unpack .../43-libfile-basedir-perl_0.09-1_all.deb ... Unpacking libfile-basedir-perl (0.09-1) ... Selecting previously unselected package libnumber-compare-perl. Preparing to unpack .../44-libnumber-compare-perl_0.03-1.1_all.deb ... Unpacking libnumber-compare-perl (0.03-1.1) ... Selecting previously unselected package libtext-glob-perl. Preparing to unpack .../45-libtext-glob-perl_0.11-1_all.deb ... Unpacking libtext-glob-perl (0.11-1) ... Selecting previously unselected package libfile-find-rule-perl. Preparing to unpack .../46-libfile-find-rule-perl_0.34-1_all.deb ... Unpacking libfile-find-rule-perl (0.34-1) ... Selecting previously unselected package libfont-ttf-perl. Preparing to unpack .../47-libfont-ttf-perl_1.06-1.1_all.deb ... Unpacking libfont-ttf-perl (1.06-1.1) ... Selecting previously unselected package libhtml-html5-entities-perl. Preparing to unpack .../48-libhtml-html5-entities-perl_0.004-1.1_all.deb ... Unpacking libhtml-html5-entities-perl (0.004-1.1) ... Selecting previously unselected package libimport-into-perl. Preparing to unpack .../49-libimport-into-perl_1.002005-1_all.deb ... Unpacking libimport-into-perl (1.002005-1) ... Selecting previously unselected package libio-interactive-perl. Preparing to unpack .../50-libio-interactive-perl_1.023-1_all.deb ... Unpacking libio-interactive-perl (1.023-1) ... Selecting previously unselected package libio-prompt-tiny-perl. Preparing to unpack .../51-libio-prompt-tiny-perl_0.003-1_all.deb ... Unpacking libio-prompt-tiny-perl (0.003-1) ... Selecting previously unselected package libipc-run3-perl. Preparing to unpack .../52-libipc-run3-perl_0.048-2_all.deb ... Unpacking libipc-run3-perl (0.048-2) ... Selecting previously unselected package libjson-maybexs-perl. Preparing to unpack .../53-libjson-maybexs-perl_1.004003-1_all.deb ... 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Processing triggers for man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.32-4) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 2476 Build-Time: 13 Distribution: unstable Foreign Architectures: mips64el Host Architecture: mips64el Install-Time: 40 Job: repeatmasker-recon_1.08-7 Lintian: pass Machine Architecture: amd64 Package: repeatmasker-recon Package-Time: 67 Source-Version: 1.08-7 Space: 2476 Status: successful Version: 1.08-7 -------------------------------------------------------------------------------- Finished at 2021-10-18T00:19:19Z Build needed 00:01:07, 2476k disk space