sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | samtools 1.10-4 (ppc64el) Thu, 27 Aug 2020 02:09:45 +0000 | +==============================================================================+ Package: samtools Version: 1.10-4 Source Version: 1.10-4 Distribution: unstable Machine Architecture: amd64 Host Architecture: ppc64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-e4defd60-bb47-423b-b2dd-d1e29735b508' with '<>' I: NOTICE: Log filtering will replace 'build/samtools-vNLlMN/resolver-CW3Yuw' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-08-26-0800.58.pdiff [6714 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-08-26-1400.50.pdiff [7618 B] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-08-26-2000.52.pdiff [6413 B] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-08-26-2000.52.pdiff [6413 B] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-08-26-0800.58.pdiff [14.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-08-26-1400.50.pdiff [6817 B] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-08-26-2000.52.pdiff [7647 B] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-08-26-2000.52.pdiff [7647 B] Get:10 http://debian.oregonstate.edu/debian unstable/main ppc64el Packages [8177 kB] Fetched 8428 kB in 2s (5198 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'samtools' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/samtools.git Please use: git clone https://salsa.debian.org/med-team/samtools.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 4480 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main samtools 1.10-4 (dsc) [2248 B] Get:2 http://debian.oregonstate.edu/debian unstable/main samtools 1.10-4 (tar) [4458 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main samtools 1.10-4 (diff) [20.4 kB] Fetched 4480 kB in 0s (63.9 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/samtools-vNLlMN/samtools-1.10' with '<>' I: NOTICE: Log filtering will replace 'build/samtools-vNLlMN' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), bash-completion, libncurses5-dev, libhts-dev (>= 1.10), zlib1g-dev, automake, autoconf-archive, pkg-config, tabix (>= 1.0), liblzma-dev, libbz2-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el Filtered Build-Depends: debhelper-compat (= 13), bash-completion, libncurses5-dev, libhts-dev (>= 1.10), zlib1g-dev, automake, autoconf-archive, pkg-config, tabix (>= 1.0), liblzma-dev, libbz2-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [498 B] Get:5 copy:/<>/apt_archive ./ Packages [571 B] Fetched 2026 B in 0s (96.2 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf autoconf-archive automake autopoint autotools-dev bash-completion binutils-powerpc64le-linux-gnu bsdextrautils build-essential cpp-10-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu cross-config crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-10-base:ppc64el gcc-10-cross-base gcc-10-powerpc64le-linux-gnu gcc-10-powerpc64le-linux-gnu-base gcc-9-base:ppc64el gcc-powerpc64le-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:ppc64el libasan6-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libbrotli1:ppc64el libbz2-1.0:ppc64el libbz2-dev:ppc64el libc6:ppc64el libc6-dev libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcom-err2:ppc64el libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:ppc64el libcrypt1:ppc64el libcurl3-gnutls:ppc64el libdb5.3:ppc64el libdebhelper-perl libdebian-dpkgcross-perl libdeflate0:ppc64el libdpkg-perl libelf1 libffi7:ppc64el libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-ppc64el-cross libgcc-9-dev:ppc64el libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgcrypt20:ppc64el libglib2.0-0 libgmp10:ppc64el libgnutls30:ppc64el libgomp1:ppc64el libgomp1-ppc64el-cross libgpg-error0:ppc64el libgssapi-krb5-2:ppc64el libhogweed6:ppc64el libhts-dev:ppc64el libhts3:ppc64el libicu67 libidn2-0:ppc64el libio-string-perl libitm1:ppc64el libitm1-ppc64el-cross libk5crypto3:ppc64el libkeyutils1:ppc64el libkrb5-3:ppc64el libkrb5support0:ppc64el libldap-2.4-2:ppc64el liblocale-gettext-perl liblsan0:ppc64el liblsan0-ppc64el-cross liblzma-dev:ppc64el liblzma5:ppc64el libmagic-mgc libmagic1 libncurses-dev:ppc64el libncurses5-dev:ppc64el libncurses6:ppc64el libncursesw6:ppc64el libnettle8:ppc64el libnghttp2-14:ppc64el libp11-kit0:ppc64el libperl5.30 libpipeline1 libpsl5:ppc64el libquadmath0:ppc64el libquadmath0-ppc64el-cross librtmp1:ppc64el libsasl2-2:ppc64el libsasl2-modules-db:ppc64el libsigsegv2 libssh2-1:ppc64el libssl1.1:ppc64el libstdc++-10-dev libstdc++-10-dev-ppc64el-cross libstdc++-9-dev:ppc64el libstdc++6:ppc64el libstdc++6-ppc64el-cross libsub-override-perl libtasn1-6:ppc64el libtinfo6:ppc64el libtool libtsan0:ppc64el libtsan0-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libunistring2:ppc64el libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:ppc64el linux-libc-dev-ppc64el-cross m4 man-db perl perl-modules-5.30 pkg-config po-debconf sensible-utils tabix:ppc64el ucf zlib1g:ppc64el zlib1g-dev:ppc64el Suggested packages: gnu-standards autoconf-doc binutils-doc gcc-10-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-10-multilib gcc-10-doc manpages-dev flex bison gdb-powerpc64le-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:ppc64el libc-l10n:ppc64el locales:ppc64el glibc-doc manpages-dev:ppc64el gnupg git bzr rng-tools:ppc64el gnutls-bin:ppc64el krb5-doc:ppc64el krb5-user:ppc64el liblzma-doc:ppc64el ncurses-doc:ppc64el libstdc++-10-doc libstdc++-9-doc:ppc64el libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx bzip2-doc:ppc64el ca-certificates:ppc64el libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpg-error-l10n:ppc64el krb5-locales:ppc64el libldap-common:ppc64el libgpm2:ppc64el publicsuffix:ppc64el libsasl2-modules:ppc64el libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf autoconf-archive automake autopoint autotools-dev bash-completion binutils-powerpc64le-linux-gnu bsdextrautils build-essential cpp-10-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu cross-config crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-10-base:ppc64el gcc-10-cross-base gcc-10-powerpc64le-linux-gnu gcc-10-powerpc64le-linux-gnu-base gcc-9-base:ppc64el gcc-powerpc64le-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:ppc64el libasan6-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libbrotli1:ppc64el libbz2-1.0:ppc64el libbz2-dev:ppc64el libc6:ppc64el libc6-dev libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcom-err2:ppc64el libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:ppc64el libcrypt1:ppc64el libcurl3-gnutls:ppc64el libdb5.3:ppc64el libdebhelper-perl libdebian-dpkgcross-perl libdeflate0:ppc64el libdpkg-perl libelf1 libffi7:ppc64el libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-ppc64el-cross libgcc-9-dev:ppc64el libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgcrypt20:ppc64el libglib2.0-0 libgmp10:ppc64el libgnutls30:ppc64el libgomp1:ppc64el libgomp1-ppc64el-cross libgpg-error0:ppc64el libgssapi-krb5-2:ppc64el libhogweed6:ppc64el libhts-dev:ppc64el libhts3:ppc64el libicu67 libidn2-0:ppc64el libio-string-perl libitm1:ppc64el libitm1-ppc64el-cross libk5crypto3:ppc64el libkeyutils1:ppc64el libkrb5-3:ppc64el libkrb5support0:ppc64el libldap-2.4-2:ppc64el liblocale-gettext-perl liblsan0:ppc64el liblsan0-ppc64el-cross liblzma-dev:ppc64el liblzma5:ppc64el libmagic-mgc libmagic1 libncurses-dev:ppc64el libncurses5-dev:ppc64el libncurses6:ppc64el libncursesw6:ppc64el libnettle8:ppc64el libnghttp2-14:ppc64el libp11-kit0:ppc64el libperl5.30 libpipeline1 libpsl5:ppc64el libquadmath0:ppc64el libquadmath0-ppc64el-cross librtmp1:ppc64el libsasl2-2:ppc64el libsasl2-modules-db:ppc64el libsigsegv2 libssh2-1:ppc64el libssl1.1:ppc64el libstdc++-10-dev libstdc++-10-dev-ppc64el-cross libstdc++-9-dev:ppc64el libstdc++6:ppc64el libstdc++6-ppc64el-cross libsub-override-perl libtasn1-6:ppc64el libtinfo6:ppc64el libtool libtsan0:ppc64el libtsan0-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libunistring2:ppc64el libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:ppc64el linux-libc-dev-ppc64el-cross m4 man-db perl perl-modules-5.30 pkg-config po-debconf sbuild-build-depends-main-dummy:ppc64el sensible-utils tabix:ppc64el ucf zlib1g:ppc64el zlib1g-dev:ppc64el 0 upgraded, 151 newly installed, 0 to remove and 0 not upgraded. Need to get 115 MB of archives. After this operation, 483 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1004 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.36-2 [140 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-5 [920 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.3-2 [1314 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.30 all 5.30.3-4 [2806 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.30 amd64 5.30.3-4 [4019 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.30.3-4 [290 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf-archive all 20190106-2.1 [746 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main ppc64el gcc-10-base ppc64el 10.2.0-5 [198 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main ppc64el gcc-9-base ppc64el 9.3.0-17 [197 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 bash-completion all 1:2.11-2 [234 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-5 [262 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-5 [120 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-5 [67.9 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.2-3 [801 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-powerpc64le-linux-gnu amd64 2.35-2 [2288 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.17-1 [104 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.31-3 [2395 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev amd64 10.2.0-5 [1736 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10 amd64 10.2.0-5 [8660 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:10.1.0-1 [1644 B] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.5 [1473 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.5 [1909 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-powerpc64le-linux-gnu-base amd64 10.2.0-3cross2 [198 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-10-powerpc64le-linux-gnu amd64 10.2.0-3cross2 [7304 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-powerpc64le-linux-gnu amd64 4:10.1.0-1 [16.8 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3.1 [39.9 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10.2.0-3cross2 [195 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-ppc64el-cross all 2.31-1cross2 [1563 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-ppc64el-cross all 10.2.0-3cross2 [30.5 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-ppc64el-cross all 10.2.0-3cross2 [107 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-ppc64el-cross all 10.2.0-3cross2 [28.4 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-ppc64el-cross all 10.2.0-3cross2 [9720 B] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-ppc64el-cross all 10.2.0-3cross2 [342 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0-ppc64el-cross all 10.2.0-3cross2 [154 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0-ppc64el-cross all 10.2.0-3cross2 [316 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-ppc64el-cross all 10.2.0-3cross2 [498 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-ppc64el-cross all 10.2.0-3cross2 [146 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libquadmath0-ppc64el-cross all 10.2.0-3cross2 [149 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-10-dev-ppc64el-cross all 10.2.0-3cross2 [1249 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-powerpc64le-linux-gnu amd64 10.2.0-3cross2 [14.5 MB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-powerpc64le-linux-gnu amd64 4:10.1.0-1 [1480 B] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-ppc64el-cross all 5.7.6-1cross2 [1222 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-ppc64el-cross all 2.31-1cross2 [2437 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev-ppc64el-cross all 10.2.0-3cross2 [1768 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10-powerpc64le-linux-gnu amd64 10.2.0-3cross2 [7967 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 g++-powerpc64le-linux-gnu amd64 4:10.1.0-1 [1188 B] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-4 [8624 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-5+b1 [710 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3.1 [38.9 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3.1 [49.9 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-ppc64el all 12.8 [6652 B] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.2 [187 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.9.0-1 [15.2 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.180-1+b1 [165 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.64.4-1 [1341 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.2 [1007 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main ppc64el libgcc-s1 ppc64el 10.2.0-5 [30.4 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main ppc64el libcrypt1 ppc64el 1:4.4.17-1 [96.3 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main ppc64el libc6 ppc64el 2.31-3 [2860 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main ppc64el libasan5 ppc64el 9.3.0-17 [408 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main ppc64el libatomic1 ppc64el 10.2.0-5 [9872 B] Get:96 http://debian.oregonstate.edu/debian unstable/main ppc64el libbrotli1 ppc64el 1.0.7-7 [273 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main ppc64el libbz2-1.0 ppc64el 1.0.8-4 [51.0 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main ppc64el linux-libc-dev ppc64el 5.7.17-1 [1152 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main ppc64el libcrypt-dev ppc64el 1:4.4.17-1 [119 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main ppc64el libc6-dev ppc64el 2.31-3 [2444 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main ppc64el libbz2-dev ppc64el 1.0.8-4 [35.8 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main ppc64el libcom-err2 ppc64el 1.45.6-1 [72.3 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main ppc64el libgmp10 ppc64el 2:6.2.0+dfsg-6 [254 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main ppc64el libnettle8 ppc64el 3.6-2 [260 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main ppc64el libhogweed6 ppc64el 3.6-2 [316 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main ppc64el libunistring2 ppc64el 0.9.10-4 [384 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main ppc64el libidn2-0 ppc64el 2.3.0-1 [88.3 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main ppc64el libffi7 ppc64el 3.3-4 [23.8 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main ppc64el libp11-kit0 ppc64el 0.23.21-2 [333 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main ppc64el libtasn1-6 ppc64el 4.16.0-2 [59.5 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main ppc64el libgnutls30 ppc64el 3.6.14-2+b1 [1150 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main ppc64el libkrb5support0 ppc64el 1.17-10 [67.7 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main ppc64el libk5crypto3 ppc64el 1.17-10 [126 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main ppc64el libkeyutils1 ppc64el 1.6.1-2 [16.7 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main ppc64el libssl1.1 ppc64el 1.1.1g-1 [1526 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main ppc64el libkrb5-3 ppc64el 1.17-10 [395 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main ppc64el libgssapi-krb5-2 ppc64el 1.17-10 [170 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main ppc64el libdb5.3 ppc64el 5.3.28+dfsg1-0.6 [718 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main ppc64el libsasl2-modules-db ppc64el 2.1.27+dfsg-2 [71.0 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main ppc64el libsasl2-2 ppc64el 2.1.27+dfsg-2 [115 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main ppc64el libldap-2.4-2 ppc64el 2.4.51+dfsg-1 [247 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main ppc64el libnghttp2-14 ppc64el 1.41.0-3 [81.3 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main ppc64el libpsl5 ppc64el 0.21.0-1.1 [57.1 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main ppc64el zlib1g ppc64el 1:1.2.11.dfsg-2 [94.7 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main ppc64el librtmp1 ppc64el 2.4+20151223.gitfa8646d.1-2+b2 [65.9 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main ppc64el libgpg-error0 ppc64el 1.38-2 [84.4 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main ppc64el libgcrypt20 ppc64el 1.8.6-2 [531 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main ppc64el libssh2-1 ppc64el 1.8.0-2.1 [147 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main ppc64el libcurl3-gnutls ppc64el 7.72.0-1 [349 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main ppc64el libdeflate0 ppc64el 1.6-1 [65.0 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main ppc64el libgomp1 ppc64el 10.2.0-5 [108 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main ppc64el libitm1 ppc64el 10.2.0-5 [28.8 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main ppc64el liblsan0 ppc64el 10.2.0-5 [155 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main ppc64el libtsan0 ppc64el 10.2.0-5 [323 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main ppc64el libstdc++6 ppc64el 10.2.0-5 [539 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main ppc64el libubsan1 ppc64el 10.2.0-5 [147 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main ppc64el libquadmath0 ppc64el 10.2.0-5 [149 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main ppc64el libgcc-9-dev ppc64el 9.3.0-17 [1259 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main ppc64el liblzma5 ppc64el 5.2.4-1+b1 [162 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main ppc64el libhts3 ppc64el 1.10.2-5 [391 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main ppc64el liblzma-dev ppc64el 5.2.4-1+b1 [221 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main ppc64el zlib1g-dev ppc64el 1:1.2.11.dfsg-2 [195 kB] Get:143 http://debian.oregonstate.edu/debian unstable/main ppc64el libhts-dev ppc64el 1.10.2-5 [4728 kB] Get:144 http://debian.oregonstate.edu/debian unstable/main ppc64el libtinfo6 ppc64el 6.2-1 [342 kB] Get:145 http://debian.oregonstate.edu/debian unstable/main ppc64el libncurses6 ppc64el 6.2-1 [114 kB] Get:146 http://debian.oregonstate.edu/debian unstable/main ppc64el libncursesw6 ppc64el 6.2-1 [148 kB] Get:147 http://debian.oregonstate.edu/debian unstable/main ppc64el libncurses-dev ppc64el 6.2-1 [375 kB] Get:148 http://debian.oregonstate.edu/debian unstable/main ppc64el libncurses5-dev ppc64el 6.2-1 [932 B] Get:149 http://debian.oregonstate.edu/debian unstable/main ppc64el libstdc++-9-dev ppc64el 9.3.0-17 [1752 kB] Get:150 http://debian.oregonstate.edu/debian unstable/main amd64 pkg-config amd64 0.29.2-1 [65.1 kB] Get:151 http://debian.oregonstate.edu/debian unstable/main ppc64el tabix ppc64el 1.10.2-5 [392 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 115 MB in 1s (78.1 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10439 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.36-2_amd64.deb ... Unpacking bsdextrautils (2.36-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../001-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-5_amd64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../003-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.3-2_amd64.deb ... Unpacking man-db (2.9.3-2) ... Selecting previously unselected package perl-modules-5.30. Preparing to unpack .../005-perl-modules-5.30_5.30.3-4_all.deb ... Unpacking perl-modules-5.30 (5.30.3-4) ... Selecting previously unselected package libperl5.30:amd64. Preparing to unpack .../006-libperl5.30_5.30.3-4_amd64.deb ... Unpacking libperl5.30:amd64 (5.30.3-4) ... Selecting previously unselected package perl. Preparing to unpack .../007-perl_5.30.3-4_amd64.deb ... Unpacking perl (5.30.3-4) ... Selecting previously unselected package autoconf-archive. Preparing to unpack .../008-autoconf-archive_20190106-2.1_all.deb ... Unpacking autoconf-archive (20190106-2.1) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../009-liblocale-gettext-perl_1.07-4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4) ... Selecting previously unselected package gcc-10-base:ppc64el. Preparing to unpack .../010-gcc-10-base_10.2.0-5_ppc64el.deb ... Unpacking gcc-10-base:ppc64el (10.2.0-5) ... Selecting previously unselected package gcc-9-base:ppc64el. Preparing to unpack .../011-gcc-9-base_9.3.0-17_ppc64el.deb ... Unpacking gcc-9-base:ppc64el (9.3.0-17) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../012-sensible-utils_0.0.12+nmu1_all.deb ... Unpacking sensible-utils (0.0.12+nmu1) ... Selecting previously unselected package bash-completion. Preparing to unpack .../013-bash-completion_1%3a2.11-2_all.deb ... Unpacking bash-completion (1:2.11-2) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../014-libmagic-mgc_1%3a5.38-5_amd64.deb ... Unpacking libmagic-mgc (1:5.38-5) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../015-libmagic1_1%3a5.38-5_amd64.deb ... Unpacking libmagic1:amd64 (1:5.38-5) ... Selecting previously unselected package file. Preparing to unpack .../016-file_1%3a5.38-5_amd64.deb ... Unpacking file (1:5.38-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../017-gettext-base_0.19.8.1-10_amd64.deb ... Unpacking gettext-base (0.19.8.1-10) ... Selecting previously unselected package ucf. Preparing to unpack .../018-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../019-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../020-m4_1.4.18-4_amd64.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../021-autoconf_2.69-11.1_all.deb ... Unpacking autoconf (2.69-11.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../022-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../023-automake_1%3a1.16.2-3_all.deb ... Unpacking automake (1:1.16.2-3) ... Selecting previously unselected package autopoint. Preparing to unpack .../024-autopoint_0.19.8.1-10_all.deb ... Unpacking autopoint (0.19.8.1-10) ... Selecting previously unselected package binutils-powerpc64le-linux-gnu. Preparing to unpack .../025-binutils-powerpc64le-linux-gnu_2.35-2_amd64.deb ... Unpacking binutils-powerpc64le-linux-gnu (2.35-2) ... Selecting previously unselected package libcrypt-dev:amd64. Preparing to unpack .../026-libcrypt-dev_1%3a4.4.17-1_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.17-1) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../027-libc6-dev_2.31-3_amd64.deb ... Unpacking libc6-dev:amd64 (2.31-3) ... Selecting previously unselected package libstdc++-10-dev:amd64. Preparing to unpack .../028-libstdc++-10-dev_10.2.0-5_amd64.deb ... Unpacking libstdc++-10-dev:amd64 (10.2.0-5) ... Selecting previously unselected package g++-10. Preparing to unpack .../029-g++-10_10.2.0-5_amd64.deb ... Unpacking g++-10 (10.2.0-5) ... Selecting previously unselected package g++. Preparing to unpack .../030-g++_4%3a10.1.0-1_amd64.deb ... Unpacking g++ (4:10.1.0-1) ... Selecting previously unselected package libdpkg-perl. Preparing to unpack .../031-libdpkg-perl_1.20.5_all.deb ... Unpacking libdpkg-perl (1.20.5) ... Selecting previously unselected package dpkg-dev. Preparing to unpack .../032-dpkg-dev_1.20.5_all.deb ... Unpacking dpkg-dev (1.20.5) ... Selecting previously unselected package build-essential. Preparing to unpack .../033-build-essential_12.8_amd64.deb ... Unpacking build-essential (12.8) ... Selecting previously unselected package gcc-10-powerpc64le-linux-gnu-base:amd64. Preparing to unpack .../034-gcc-10-powerpc64le-linux-gnu-base_10.2.0-3cross2_amd64.deb ... Unpacking gcc-10-powerpc64le-linux-gnu-base:amd64 (10.2.0-3cross2) ... Selecting previously unselected package cpp-10-powerpc64le-linux-gnu. Preparing to unpack .../035-cpp-10-powerpc64le-linux-gnu_10.2.0-3cross2_amd64.deb ... Unpacking cpp-10-powerpc64le-linux-gnu (10.2.0-3cross2) ... Selecting previously unselected package cpp-powerpc64le-linux-gnu. Preparing to unpack .../036-cpp-powerpc64le-linux-gnu_4%3a10.1.0-1_amd64.deb ... Unpacking cpp-powerpc64le-linux-gnu (4:10.1.0-1) ... Selecting previously unselected package cross-config. Preparing to unpack .../037-cross-config_2.6.15-3.1_all.deb ... Unpacking cross-config (2.6.15-3.1) ... Selecting previously unselected package gcc-10-cross-base. Preparing to unpack .../038-gcc-10-cross-base_10.2.0-3cross2_all.deb ... Unpacking gcc-10-cross-base (10.2.0-3cross2) ... Selecting previously unselected package libc6-ppc64el-cross. Preparing to unpack .../039-libc6-ppc64el-cross_2.31-1cross2_all.deb ... Unpacking libc6-ppc64el-cross (2.31-1cross2) ... Selecting previously unselected package libgcc-s1-ppc64el-cross. Preparing to unpack .../040-libgcc-s1-ppc64el-cross_10.2.0-3cross2_all.deb ... Unpacking libgcc-s1-ppc64el-cross (10.2.0-3cross2) ... Selecting previously unselected package libgomp1-ppc64el-cross. Preparing to unpack .../041-libgomp1-ppc64el-cross_10.2.0-3cross2_all.deb ... Unpacking libgomp1-ppc64el-cross (10.2.0-3cross2) ... Selecting previously unselected package libitm1-ppc64el-cross. Preparing to unpack .../042-libitm1-ppc64el-cross_10.2.0-3cross2_all.deb ... Unpacking libitm1-ppc64el-cross (10.2.0-3cross2) ... Selecting previously unselected package libatomic1-ppc64el-cross. Preparing to unpack .../043-libatomic1-ppc64el-cross_10.2.0-3cross2_all.deb ... Unpacking libatomic1-ppc64el-cross (10.2.0-3cross2) ... Selecting previously unselected package libasan6-ppc64el-cross. Preparing to unpack .../044-libasan6-ppc64el-cross_10.2.0-3cross2_all.deb ... Unpacking libasan6-ppc64el-cross (10.2.0-3cross2) ... Selecting previously unselected package liblsan0-ppc64el-cross. Preparing to unpack .../045-liblsan0-ppc64el-cross_10.2.0-3cross2_all.deb ... Unpacking liblsan0-ppc64el-cross (10.2.0-3cross2) ... Selecting previously unselected package libtsan0-ppc64el-cross. Preparing to unpack .../046-libtsan0-ppc64el-cross_10.2.0-3cross2_all.deb ... Unpacking libtsan0-ppc64el-cross (10.2.0-3cross2) ... Selecting previously unselected package libstdc++6-ppc64el-cross. Preparing to unpack .../047-libstdc++6-ppc64el-cross_10.2.0-3cross2_all.deb ... Unpacking libstdc++6-ppc64el-cross (10.2.0-3cross2) ... Selecting previously unselected package libubsan1-ppc64el-cross. Preparing to unpack .../048-libubsan1-ppc64el-cross_10.2.0-3cross2_all.deb ... Unpacking libubsan1-ppc64el-cross (10.2.0-3cross2) ... Selecting previously unselected package libquadmath0-ppc64el-cross. Preparing to unpack .../049-libquadmath0-ppc64el-cross_10.2.0-3cross2_all.deb ... Unpacking libquadmath0-ppc64el-cross (10.2.0-3cross2) ... Selecting previously unselected package libgcc-10-dev-ppc64el-cross. Preparing to unpack .../050-libgcc-10-dev-ppc64el-cross_10.2.0-3cross2_all.deb ... Unpacking libgcc-10-dev-ppc64el-cross (10.2.0-3cross2) ... Selecting previously unselected package gcc-10-powerpc64le-linux-gnu. Preparing to unpack .../051-gcc-10-powerpc64le-linux-gnu_10.2.0-3cross2_amd64.deb ... Unpacking gcc-10-powerpc64le-linux-gnu (10.2.0-3cross2) ... Selecting previously unselected package gcc-powerpc64le-linux-gnu. Preparing to unpack .../052-gcc-powerpc64le-linux-gnu_4%3a10.1.0-1_amd64.deb ... Unpacking gcc-powerpc64le-linux-gnu (4:10.1.0-1) ... Selecting previously unselected package linux-libc-dev-ppc64el-cross. Preparing to unpack .../053-linux-libc-dev-ppc64el-cross_5.7.6-1cross2_all.deb ... Unpacking linux-libc-dev-ppc64el-cross (5.7.6-1cross2) ... Selecting previously unselected package libc6-dev-ppc64el-cross. Preparing to unpack .../054-libc6-dev-ppc64el-cross_2.31-1cross2_all.deb ... Unpacking libc6-dev-ppc64el-cross (2.31-1cross2) ... Selecting previously unselected package libstdc++-10-dev-ppc64el-cross. Preparing to unpack .../055-libstdc++-10-dev-ppc64el-cross_10.2.0-3cross2_all.deb ... Unpacking libstdc++-10-dev-ppc64el-cross (10.2.0-3cross2) ... Selecting previously unselected package g++-10-powerpc64le-linux-gnu. Preparing to unpack .../056-g++-10-powerpc64le-linux-gnu_10.2.0-3cross2_amd64.deb ... Unpacking g++-10-powerpc64le-linux-gnu (10.2.0-3cross2) ... Selecting previously unselected package g++-powerpc64le-linux-gnu. Preparing to unpack .../057-g++-powerpc64le-linux-gnu_4%3a10.1.0-1_amd64.deb ... Unpacking g++-powerpc64le-linux-gnu (4:10.1.0-1) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../058-libconfig-inifiles-perl_3.000003-1_all.deb ... Unpacking libconfig-inifiles-perl (3.000003-1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../059-libio-string-perl_1.08-3_all.deb ... Unpacking libio-string-perl (1.08-3) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../060-libicu67_67.1-4_amd64.deb ... Unpacking libicu67:amd64 (67.1-4) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../061-libxml2_2.9.10+dfsg-5+b1_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-5+b1) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../062-libxml-namespacesupport-perl_1.12-1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../063-libxml-sax-base-perl_1.09-1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../064-libxml-sax-perl_1.02+dfsg-1_all.deb ... Unpacking libxml-sax-perl (1.02+dfsg-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../065-libxml-libxml-perl_2.0134+dfsg-2_amd64.deb ... Unpacking libxml-libxml-perl (2.0134+dfsg-2) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../066-libxml-simple-perl_2.25-1_all.deb ... 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Selecting previously unselected package libldap-2.4-2:ppc64el. Preparing to unpack .../119-libldap-2.4-2_2.4.51+dfsg-1_ppc64el.deb ... Unpacking libldap-2.4-2:ppc64el (2.4.51+dfsg-1) ... Selecting previously unselected package libnghttp2-14:ppc64el. Preparing to unpack .../120-libnghttp2-14_1.41.0-3_ppc64el.deb ... Unpacking libnghttp2-14:ppc64el (1.41.0-3) ... Selecting previously unselected package libpsl5:ppc64el. Preparing to unpack .../121-libpsl5_0.21.0-1.1_ppc64el.deb ... Unpacking libpsl5:ppc64el (0.21.0-1.1) ... Selecting previously unselected package zlib1g:ppc64el. Preparing to unpack .../122-zlib1g_1%3a1.2.11.dfsg-2_ppc64el.deb ... Unpacking zlib1g:ppc64el (1:1.2.11.dfsg-2) ... Selecting previously unselected package librtmp1:ppc64el. Preparing to unpack .../123-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_ppc64el.deb ... Unpacking librtmp1:ppc64el (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libgpg-error0:ppc64el. 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Setting up bsdextrautils (2.36-2) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-4) ... Setting up libmagic-mgc (1:5.38-5) ... Setting up libglib2.0-0:amd64 (2.64.4-1) ... No schema files found: doing nothing. Setting up libc6-ppc64el-cross (2.31-1cross2) ... Setting up libmagic1:amd64 (1:5.38-5) ... Setting up linux-libc-dev:ppc64el (5.7.17-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up autoconf-archive (20190106-2.1) ... Setting up file (1:5.38-5) ... Setting up gcc-10-base:ppc64el (10.2.0-5) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3.1) ... Setting up bash-completion (1:2.11-2) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up autopoint (0.19.8.1-10) ... Setting up gcc-10-cross-base (10.2.0-3cross2) ... Setting up libitm1-ppc64el-cross (10.2.0-3cross2) ... Setting up libatomic1-ppc64el-cross (10.2.0-3cross2) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.17-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up linux-libc-dev-ppc64el-cross (5.7.6-1cross2) ... Setting up libperl5.30:amd64 (5.30.3-4) ... Setting up libc6-dev:amd64 (2.31-3) ... Setting up libgcc-s1-ppc64el-cross (10.2.0-3cross2) ... Setting up cpp-10-powerpc64le-linux-gnu (10.2.0-3cross2) ... Setting up binutils-powerpc64le-linux-gnu (2.35-2) ... Setting up libelf1:amd64 (0.180-1+b1) ... Setting up libxml2:amd64 (2.9.10+dfsg-5+b1) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up cpp-powerpc64le-linux-gnu (4:10.1.0-1) ... Setting up gcc-9-base:ppc64el (9.3.0-17) ... Setting up libstdc++-10-dev:amd64 (10.2.0-5) ... Setting up libasan6-ppc64el-cross (10.2.0-3cross2) ... Setting up g++-10 (10.2.0-5) ... Setting up libc6-dev-ppc64el-cross (2.31-1cross2) ... Setting up libtool (2.4.6-14) ... Setting up libquadmath0-ppc64el-cross (10.2.0-3cross2) ... Setting up m4 (1.4.18-4) ... Setting up libgomp1-ppc64el-cross (10.2.0-3cross2) ... Setting up liblsan0-ppc64el-cross (10.2.0-3cross2) ... Setting up perl (5.30.3-4) ... Setting up libtsan0-ppc64el-cross (10.2.0-3cross2) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.5) ... Setting up libstdc++6-ppc64el-cross (10.2.0-3cross2) ... Setting up autoconf (2.69-11.1) ... Setting up g++ (4:10.1.0-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up libsub-override-perl (0.09-2) ... Setting up automake (1:1.16.2-3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up gettext (0.19.8.1-10) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libubsan1-ppc64el-cross (10.2.0-3cross2) ... Setting up libdebhelper-perl (13.2) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.20.5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up pkg-config (0.29.2-1) ... Setting up build-essential (12.8) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up libgcc-10-dev-ppc64el-cross (10.2.0-3cross2) ... Setting up po-debconf (1.0.21) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++-10-dev-ppc64el-cross (10.2.0-3cross2) ... Setting up gcc-10-powerpc64le-linux-gnu (10.2.0-3cross2) ... Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up g++-10-powerpc64le-linux-gnu (10.2.0-3cross2) ... Setting up gcc-powerpc64le-linux-gnu (4:10.1.0-1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-powerpc64le-linux-gnu (4:10.1.0-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3.1) ... Setting up dpkg-cross (2.6.15-3.1) ... Setting up crossbuild-essential-ppc64el (12.8) ... Setting up libcrypt1:ppc64el (1:4.4.17-1) ... Setting up libgcc-s1:ppc64el (10.2.0-5) ... Setting up dh-autoreconf (19) ... Setting up libc6:ppc64el (2.31-3) ... Setting up libcrypt-dev:ppc64el (1:4.4.17-1) ... Setting up libtasn1-6:ppc64el (4.16.0-2) ... Setting up libc6-dev:ppc64el (2.31-3) ... Setting up libbz2-1.0:ppc64el (1.0.8-4) ... Setting up libdb5.3:ppc64el (5.3.28+dfsg1-0.6) ... Setting up libstdc++6:ppc64el (10.2.0-5) ... Setting up liblsan0:ppc64el (10.2.0-5) ... Setting up libitm1:ppc64el (10.2.0-5) ... Setting up libtinfo6:ppc64el (6.2-1) ... Setting up libbz2-dev:ppc64el (1.0.8-4) ... Setting up libtsan0:ppc64el (10.2.0-5) ... Setting up libkeyutils1:ppc64el (1.6.1-2) ... Setting up liblzma5:ppc64el (5.2.4-1+b1) ... Setting up libgpg-error0:ppc64el (1.38-2) ... Setting up libssl1.1:ppc64el (1.1.1g-1) ... Setting up libbrotli1:ppc64el (1.0.7-7) ... Setting up libffi7:ppc64el (3.3-4) ... Setting up libnghttp2-14:ppc64el (1.41.0-3) ... Setting up libunistring2:ppc64el (0.9.10-4) ... Setting up libdeflate0:ppc64el (1.6-1) ... Setting up libgcrypt20:ppc64el (1.8.6-2) ... Setting up debhelper (13.2) ... Setting up zlib1g:ppc64el (1:1.2.11.dfsg-2) ... Setting up libidn2-0:ppc64el (2.3.0-1) ... Setting up libcom-err2:ppc64el (1.45.6-1) ... Setting up libgomp1:ppc64el (10.2.0-5) ... Setting up libkrb5support0:ppc64el (1.17-10) ... Setting up libsasl2-modules-db:ppc64el (2.1.27+dfsg-2) ... Setting up libasan5:ppc64el (9.3.0-17) ... Setting up libnettle8:ppc64el (3.6-2) ... Setting up libgmp10:ppc64el (2:6.2.0+dfsg-6) ... Setting up libncurses6:ppc64el (6.2-1) ... Setting up libquadmath0:ppc64el (10.2.0-5) ... Setting up libp11-kit0:ppc64el (0.23.21-2) ... Setting up libatomic1:ppc64el (10.2.0-5) ... Setting up libncursesw6:ppc64el (6.2-1) ... Setting up libk5crypto3:ppc64el (1.17-10) ... Setting up libsasl2-2:ppc64el (2.1.27+dfsg-2) ... Setting up liblzma-dev:ppc64el (5.2.4-1+b1) ... Setting up libubsan1:ppc64el (10.2.0-5) ... Setting up zlib1g-dev:ppc64el (1:1.2.11.dfsg-2) ... Setting up libssh2-1:ppc64el (1.8.0-2.1) ... Setting up libkrb5-3:ppc64el (1.17-10) ... Setting up libncurses-dev:ppc64el (6.2-1) ... Setting up libpsl5:ppc64el (0.21.0-1.1) ... Setting up libhogweed6:ppc64el (3.6-2) ... Setting up libgcc-9-dev:ppc64el (9.3.0-17) ... Setting up libgnutls30:ppc64el (3.6.14-2+b1) ... Setting up librtmp1:ppc64el (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libgssapi-krb5-2:ppc64el (1.17-10) ... Setting up libncurses5-dev:ppc64el (6.2-1) ... Setting up libstdc++-9-dev:ppc64el (9.3.0-17) ... Setting up libldap-2.4-2:ppc64el (2.4.51+dfsg-1) ... Setting up libcurl3-gnutls:ppc64el (7.72.0-1) ... Setting up tabix:ppc64el (1.10.2-5) ... Setting up libhts3:ppc64el (1.10.2-5) ... Setting up libhts-dev:ppc64el (1.10.2-5) ... Setting up sbuild-build-depends-main-dummy:ppc64el (0.invalid.0) ... Processing triggers for libc-bin (2.31-3) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (ppc64el included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-9-amd64 #1 SMP Debian 4.19.118-2+deb10u1 (2020-06-07) amd64 (x86_64) Toolchain package versions: binutils_2.35-2 dpkg-dev_1.20.5 g++-10_10.2.0-5 gcc-10_10.2.0-5 libc6-dev_2.31-3 libstdc++-10-dev_10.2.0-5 libstdc++-10-dev-ppc64el-cross_10.2.0-3cross2 libstdc++-9-dev_9.3.0-17 libstdc++6_10.2.0-5 libstdc++6-ppc64el-cross_10.2.0-3cross2 linux-libc-dev_5.7.17-1 Package versions: adduser_3.118 apt_2.1.10 autoconf_2.69-11.1 autoconf-archive_20190106-2.1 automake_1:1.16.2-3 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-7 bash-completion_1:2.11-2 binutils_2.35-2 binutils-common_2.35-2 binutils-powerpc64le-linux-gnu_2.35-2 binutils-x86-64-linux-gnu_2.35-2 bsdextrautils_2.36-2 bsdutils_1:2.36-2 build-essential_12.8 bzip2_1.0.8-4 coreutils_8.32-3 cpp_4:10.1.0-1 cpp-10_10.2.0-5 cpp-10-powerpc64le-linux-gnu_10.2.0-3cross2 cpp-8_8.4.0-4 cpp-powerpc64le-linux-gnu_4:10.1.0-1 cross-config_2.6.15-3.1 crossbuild-essential-ppc64el_12.8 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2 debian-archive-keyring_2019.1 debianutils_4.11.1 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dpkg_1.20.5 dpkg-cross_2.6.15-3.1 dpkg-dev_1.20.5 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.36-2 file_1:5.38-5 findutils_4.7.0-1 g++_4:10.1.0-1 g++-10_10.2.0-5 g++-10-powerpc64le-linux-gnu_10.2.0-3cross2 g++-powerpc64le-linux-gnu_4:10.1.0-1 gcc_4:10.1.0-1 gcc-10_10.2.0-5 gcc-10-base_10.2.0-5 gcc-10-cross-base_10.2.0-3cross2 gcc-10-powerpc64le-linux-gnu_10.2.0-3cross2 gcc-10-powerpc64le-linux-gnu-base_10.2.0-3cross2 gcc-8-base_8.4.0-4 gcc-9-base_9.3.0-17 gcc-powerpc64le-linux-gnu_4:10.1.0-1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.1.10 libarchive-zip-perl_1.68-1 libasan5_9.3.0-17 libasan6_10.2.0-5 libasan6-ppc64el-cross_10.2.0-3cross2 libatomic1_10.2.0-5 libatomic1-ppc64el-cross_10.2.0-3cross2 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3+b1 libbinutils_2.35-2 libblkid1_2.36-2 libbrotli1_1.0.7-7 libbz2-1.0_1.0.8-4 libbz2-dev_1.0.8-4 libc-bin_2.31-3 libc-dev-bin_2.31-3 libc6_2.31-3 libc6-dev_2.31-3 libc6-dev-ppc64el-cross_2.31-1cross2 libc6-ppc64el-cross_2.31-1cross2 libcap-ng0_0.7.9-2.2 libcc1-0_10.2.0-5 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000003-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35-2 libctf0_2.35-2 libcurl3-gnutls_7.72.0-1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.253 libdebhelper-perl_13.2 libdebian-dpkgcross-perl_2.6.15-3.1 libdeflate0_1.6-1 libdpkg-perl_1.20.5 libelf1_0.180-1+b1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.36-2 libffi6_3.2.1-9 libffi7_3.3-4 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.9.0-1 libfile-which-perl_1.23-1 libgcc-10-dev_10.2.0-5 libgcc-10-dev-ppc64el-cross_10.2.0-3cross2 libgcc-9-dev_9.3.0-17 libgcc-s1_10.2.0-5 libgcc-s1-ppc64el-cross_10.2.0-3cross2 libgcrypt20_1.8.6-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libglib2.0-0_2.64.4-1 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.14-2+b1 libgomp1_10.2.0-5 libgomp1-ppc64el-cross_10.2.0-3cross2 libgpg-error0_1.38-2 libgssapi-krb5-2_1.17-10 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.6-2 libhts-dev_1.10.2-5 libhts3_1.10.2-5 libicu67_67.1-4 libidn2-0_2.3.0-1 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 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libselinux1_3.1-2 libsemanage-common_3.1-1 libsemanage1_3.1-1 libsepol1_3.1-1 libsigsegv2_2.12-2 libsmartcols1_2.36-2 libss2_1.45.6-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1g-1 libstdc++-10-dev_10.2.0-5 libstdc++-10-dev-ppc64el-cross_10.2.0-3cross2 libstdc++-9-dev_9.3.0-17 libstdc++6_10.2.0-5 libstdc++6-ppc64el-cross_10.2.0-3cross2 libsub-override-perl_0.09-2 libsystemd0_246.2-1 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libtsan0_10.2.0-5 libtsan0-ppc64el-cross_10.2.0-3cross2 libubsan1_10.2.0-5 libubsan1-ppc64el-cross_10.2.0-3cross2 libuchardet0_0.0.7-1 libudev1_246.2-1 libunistring2_0.9.10-4 libuuid1_2.36-2 libxml-libxml-perl_2.0134+dfsg-2 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-5+b1 libyaml-perl_1.30-1 libzstd1_1.4.5+dfsg-4 linux-libc-dev_5.7.17-1 linux-libc-dev-ppc64el-cross_5.7.6-1cross2 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.36-2 ncurses-base_6.2-1 ncurses-bin_6.2-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.3-4 pkg-config_0.29.2-1 po-debconf_1.0.21 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-4 tabix_1.10.2-5 tar_1.30+dfsg-7 tzdata_2020a-1 ucf_3.0043 util-linux_2.36-2 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: samtools Binary: samtools, samtools-test Architecture: any all Version: 1.10-4 Maintainer: Debian Med Packaging Team Uploaders: Charles Plessy , Andreas Tille Homepage: http://www.htslib.org/ Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/samtools Vcs-Git: https://salsa.debian.org/med-team/samtools.git Testsuite: autopkgtest Testsuite-Triggers: tabix Build-Depends: debhelper-compat (= 13), bash-completion, libio-pty-perl , libncurses5-dev, libhts-dev (>= 1.10), zlib1g-dev, automake, autoconf-archive, pkg-config, tabix (>= 1.0), liblzma-dev, libbz2-dev Package-List: samtools deb science optional arch=any samtools-test deb science optional arch=all Checksums-Sha1: 98b24393629d63f2203f59c108b840b1e046f209 4457760 samtools_1.10.orig.tar.gz 0b1654cf7f6ae2b94ff5dbff4645ecf6efc5d2c6 20376 samtools_1.10-4.debian.tar.xz Checksums-Sha256: 382843e85fdb55868cebaaf2585c43776762d099581341b5803677de5ed117a9 4457760 samtools_1.10.orig.tar.gz b0da544ef217cd9cc1443fd85b262a288b123576632fe9f1525dee454447bb1e 20376 samtools_1.10-4.debian.tar.xz Files: dc147b46cabbb2c168529e474e947b1d 4457760 samtools_1.10.orig.tar.gz 58260557c4a5666110b9d314bafa1c53 20376 samtools_1.10-4.debian.tar.xz -----BEGIN PGP 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made Fri Jun 19 11:26:24 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./samtools_1.10-4.dsc dpkg-source: info: extracting samtools in /<> dpkg-source: info: unpacking samtools_1.10.orig.tar.gz dpkg-source: info: unpacking samtools_1.10-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying spelling.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.ppc64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-e4defd60-bb47-423b-b2dd-d1e29735b508 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -appc64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package samtools dpkg-buildpackage: info: source version 1.10-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type powerpc64le-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el dpkg-source: info: using options from samtools-1.10/debian/source/options: --single-debian-patch --extend-diff-ignore=^(\.travis.*|README.md)$ debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' rm -f config.mk touch config.mk dh_auto_clean -- install -d /<>/debian/.debhelper/generated/_source/home make -j1 distclean make[2]: Entering directory '/<>' rm -f test/*.new test/*.tmp test/*/*.new test/*/*.tmp test/*/*.tmp.* cd test/dat && rm -f test_input_*.bam.bai cd test/mpileup && rm -f FAIL-*.out* PASS-*.out* anomalous.[bc]*am indels.[bc]*am mpileup.*.[cs]*am mpileup.*.crai overlap50.[bc]*am expected/1.out xx#depth*.bam* rm -f *.o misc/*.o test/*.o test/*/*.o version.h ./lz4/lz4.o rm -f samtools libbam.a libst.a misc/ace2sam misc/maq2sam-long misc/maq2sam-short misc/md5fa misc/md5sum-lite misc/wgsim test/merge/test_bam_translate test/merge/test_rtrans_build test/merge/test_trans_tbl_init test/split/test_count_rg test/split/test_expand_format_string test/split/test_filter_header_rg test/split/test_parse_args test/vcf-miniview rm -f config.cache config.h config.log config.mk config.status rm -f TAGS rm -rf autom4te.cache make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/samtools.substvars debian/samtools-test.substvars debian/files rm -fr -- debian/samtools/ debian/tmp/ debian/samtools-test/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.before grep -q ^XDT_ configure.ac autoreconf -f -i configure.ac:63: warning: AC_CONFIG_SUBDIRS: you should use literals ../../lib/autoconf/status.m4:1097: AC_CONFIG_SUBDIRS is expanded from... m4/ax_with_htslib.m4:55: AX_WITH_HTSLIB is expanded from... configure.ac:63: the top level configure.ac:63: warning: AC_CONFIG_SUBDIRS: you should use literals ../../lib/autoconf/status.m4:1097: AC_CONFIG_SUBDIRS is expanded from... m4/ax_with_htslib.m4:55: AX_WITH_HTSLIB is expanded from... configure.ac:63: the top level configure.ac:63: warning: AC_CONFIG_SUBDIRS: you should use literals ../../lib/autoconf/status.m4:1097: AC_CONFIG_SUBDIRS is expanded from... m4/ax_with_htslib.m4:55: AX_WITH_HTSLIB is expanded from... configure.ac:63: the top level configure.ac:63: warning: AC_CONFIG_SUBDIRS: you should use literals ../../lib/autoconf/status.m4:1097: AC_CONFIG_SUBDIRS is expanded from... m4/ax_with_htslib.m4:55: AX_WITH_HTSLIB is expanded from... configure.ac:63: the top level find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.after debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' touch config.mk aclocal --force -I debian/ -I /usr/share/aclocal configure.ac:63: warning: AC_CONFIG_SUBDIRS: you should use literals ../../lib/autoconf/status.m4:1097: AC_CONFIG_SUBDIRS is expanded from... m4/ax_with_htslib.m4:55: AX_WITH_HTSLIB is expanded from... configure.ac:63: the top level autoconf configure.ac:63: warning: AC_CONFIG_SUBDIRS: you should use literals ../../lib/autoconf/status.m4:1097: AC_CONFIG_SUBDIRS is expanded from... m4/ax_with_htslib.m4:55: AX_WITH_HTSLIB is expanded from... configure.ac:63: the top level dh_auto_configure -- --with-htslib=system install -d /<>/debian/.debhelper/generated/_source/home ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/powerpc64le-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=powerpc64le-linux-gnu --with-htslib=system configure: loading site script /etc/dpkg-cross/cross-config.ppc64el checking for powerpc64le-linux-gnu-gcc... powerpc64le-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether powerpc64le-linux-gnu-gcc accepts -g... yes checking for powerpc64le-linux-gnu-gcc option to accept ISO C89... none needed checking for grep that handles long lines and -e... /bin/grep checking for C compiler warning flags... -Wall checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for htslib/sam.h... yes checking for hts_version in -lhts... yes checking for Curses library... yes checking for working curses.h... yes checking for X/Open Enhanced Curses conformance... no checking for Curses color functions... yes checking for obsolete Curses functions... yes checking for zlib.h... yes checking for inflate in -lz... yes checking for library containing regcomp... none required configure: creating ./config.status config.status: creating config.mk config.status: creating config.h make[1]: Leaving directory '/<>' rm -f debian/samtools.debhelper.log debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build -- \ CFLAGS="$(dpkg-buildflags --get CFLAGS)" \ CPPFLAGS="\$(DFLAGS) \$(INCLUDES) $(dpkg-buildflags --get CPPFLAGS)" \ LDFLAGS="$(dpkg-buildflags --get LDFLAGS)" make -j1 "CFLAGS=-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security" "CPPFLAGS=\$(DFLAGS) \$(INCLUDES) -Wdate-time -D_FORTIFY_SOURCE=2" "LDFLAGS=-Wl,-z,relro -Wl,-z,now" make[2]: Entering directory '/<>' powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_index.o bam_index.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_plcmd.o bam_plcmd.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sam_view.o sam_view.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_fastq.o bam_fastq.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_cat.o bam_cat.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_md.o bam_md.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_reheader.o bam_reheader.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_sort.o bam_sort.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bedidx.o bedidx.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_rmdup.o bam_rmdup.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_rmdupse.o bam_rmdupse.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_mate.o bam_mate.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_stat.o bam_stat.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_color.o bam_color.c echo '#define SAMTOOLS_VERSION "1.10"' > version.h powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bamtk.o bamtk.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam2bcf.o bam2bcf.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam2bcf_indel.o bam2bcf_indel.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sample.o sample.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cut_target.o cut_target.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o phase.o phase.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam2depth.o bam2depth.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o coverage.o coverage.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o padding.o padding.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bedcov.o bedcov.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bamshuf.o bamshuf.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o faidx.o faidx.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dict.o dict.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o stats.o stats.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o stats_isize.o stats_isize.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_flags.o bam_flags.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_split.o bam_split.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_tview.o bam_tview.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_tview_curses.o bam_tview_curses.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_tview_html.o bam_tview_html.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_lpileup.o bam_lpileup.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_quickcheck.o bam_quickcheck.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_addrprg.o bam_addrprg.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_markdup.o bam_markdup.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tmp_file.o tmp_file.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o lz4/lz4.o lz4/lz4.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_aux.o bam_aux.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam.o bam.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sam.o sam.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_plbuf.o bam_plbuf.c ar -csru libbam.a bam_aux.o bam.o sam.o bam_plbuf.o ar: `u' modifier ignored since `D' is the default (see `U') powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sam_opts.o sam_opts.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sam_utils.o sam_utils.c ar -rcs libst.a sam_opts.o sam_utils.o powerpc64le-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o samtools bam_index.o bam_plcmd.o sam_view.o bam_fastq.o bam_cat.o bam_md.o bam_reheader.o bam_sort.o bedidx.o bam_rmdup.o bam_rmdupse.o bam_mate.o bam_stat.o bam_color.o bamtk.o bam2bcf.o bam2bcf_indel.o sample.o cut_target.o phase.o bam2depth.o coverage.o padding.o bedcov.o bamshuf.o faidx.o dict.o stats.o stats_isize.o bam_flags.o bam_split.o bam_tview.o bam_tview_curses.o bam_tview_html.o bam_lpileup.o bam_quickcheck.o bam_addrprg.o bam_markdup.o tmp_file.o ./lz4/lz4.o libbam.a libst.a -lhts -lcurses -lm -lz -lpthread powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o misc/ace2sam.o misc/ace2sam.c powerpc64le-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -o misc/ace2sam misc/ace2sam.o -lz powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DMAQ_LONGREADS -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o misc/maq2sam-long.o misc/maq2sam.c powerpc64le-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -o misc/maq2sam-long misc/maq2sam-long.o -lz powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o misc/maq2sam-short.o misc/maq2sam.c powerpc64le-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -o misc/maq2sam-short misc/maq2sam-short.o -lz powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o misc/md5fa.o misc/md5fa.c powerpc64le-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o misc/md5fa misc/md5fa.o -lhts -lz powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o misc/md5sum-lite.o misc/md5sum-lite.c powerpc64le-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o misc/md5sum-lite misc/md5sum-lite.o -lhts -lz powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o misc/wgsim.o misc/wgsim.c powerpc64le-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o misc/wgsim misc/wgsim.o -lm -lhts -lz powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/merge/test_bam_translate.o test/merge/test_bam_translate.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test.o test/test.c powerpc64le-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o test/merge/test_bam_translate test/merge/test_bam_translate.o test/test.o libst.a -lhts -lz -lpthread powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/merge/test_rtrans_build.o test/merge/test_rtrans_build.c powerpc64le-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o test/merge/test_rtrans_build test/merge/test_rtrans_build.o test/test.o libst.a -lhts -lz -lpthread powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/merge/test_trans_tbl_init.o test/merge/test_trans_tbl_init.c powerpc64le-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o test/merge/test_trans_tbl_init test/merge/test_trans_tbl_init.o test/test.o libst.a -lhts -lz -lpthread powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/split/test_count_rg.o test/split/test_count_rg.c powerpc64le-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o test/split/test_count_rg test/split/test_count_rg.o test/test.o libst.a -lhts -lz -lpthread powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/split/test_expand_format_string.o test/split/test_expand_format_string.c powerpc64le-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o test/split/test_expand_format_string test/split/test_expand_format_string.o test/test.o libst.a -lhts -lz -lpthread powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/split/test_filter_header_rg.o test/split/test_filter_header_rg.c powerpc64le-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o test/split/test_filter_header_rg test/split/test_filter_header_rg.o test/test.o libst.a -lhts -lz -lpthread powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/split/test_parse_args.o test/split/test_parse_args.c powerpc64le-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o test/split/test_parse_args test/split/test_parse_args.o test/test.o libst.a -lhts -lz -lpthread powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/vcf-miniview.o test/vcf-miniview.c powerpc64le-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o test/vcf-miniview test/vcf-miniview.o -lhts -lz -lpthread make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_testroot -a dh_prep -a rm -f -- debian/samtools.substvars rm -fr -- debian/.debhelper/generated/samtools/ debian/samtools/ debian/tmp/ rm -f debian/samtools.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/<>' dh_auto_install -- \ prefix=/usr install -d /<>/debian/tmp make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no prefix=/usr make[2]: Entering directory '/<>' mkdir -p -m 755 /<>/debian/tmp/usr/bin /<>/debian/tmp/usr/bin /<>/debian/tmp/usr/share/man/man1 install -p samtools /<>/debian/tmp/usr/bin install -p misc/ace2sam misc/maq2sam-long misc/maq2sam-short misc/md5fa misc/md5sum-lite misc/wgsim /<>/debian/tmp/usr/bin install -p misc/blast2sam.pl misc/bowtie2sam.pl misc/export2sam.pl misc/interpolate_sam.pl misc/novo2sam.pl misc/plot-bamstats misc/psl2sam.pl misc/sam2vcf.pl misc/samtools.pl misc/seq_cache_populate.pl misc/soap2sam.pl misc/wgsim_eval.pl misc/zoom2sam.pl /<>/debian/tmp/usr/bin install -p -m 644 doc/samtools*.1 misc/wgsim.1 /<>/debian/tmp/usr/share/man/man1 make[2]: Leaving directory '/<>' make clean make[2]: Entering directory '/<>' rm -f test/*.new test/*.tmp test/*/*.new test/*/*.tmp test/*/*.tmp.* cd test/dat && rm -f test_input_*.bam.bai cd test/mpileup && rm -f FAIL-*.out* PASS-*.out* anomalous.[bc]*am indels.[bc]*am mpileup.*.[cs]*am mpileup.*.crai overlap50.[bc]*am expected/1.out xx#depth*.bam* rm -f *.o misc/*.o test/*.o test/*/*.o version.h ./lz4/lz4.o rm -f samtools libbam.a libst.a misc/ace2sam misc/maq2sam-long misc/maq2sam-short misc/md5fa misc/md5sum-lite misc/wgsim test/merge/test_bam_translate test/merge/test_rtrans_build test/merge/test_trans_tbl_init test/split/test_count_rg test/split/test_expand_format_string test/split/test_filter_header_rg test/split/test_parse_args test/vcf-miniview make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' rm -f debian/samtools.debhelper.log debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install install -d debian/samtools//usr cp --reflink=auto -a debian/tmp/usr/bin debian/samtools//usr/ install -d debian/samtools//usr/share/man cp --reflink=auto -a debian/tmp/usr/share/man/man1 debian/samtools//usr/share/man/ install -d debian/samtools/usr/share/commonwl/ cp --reflink=auto -a ./debian/samtools-faidx.cwl ./debian/samtools-index.cwl ./debian/samtools-rmdup.cwl ./debian/samtools-sort.cwl ./debian/samtools-view.cwl debian/samtools/usr/share/commonwl// cp --reflink=auto -a ./debian/mans/ace2sam.1 ./debian/mans/samtools.pl.1 ./debian/mans/wgsim.1 debian/samtools/usr/share/man/man1/ install -d debian/.debhelper/generated/samtools install -d debian/.debhelper/generated/samtools-test # Fix Perl interpreter PATH for pscript in `grep -Rl '#!/usr/bin/env \+perl' debian/*` ; do \ sed -i '1s?#!/usr/bin/env \+perl?#!/usr/bin/perl?' ${pscript} ; \ done make[1]: Leaving directory '/<>' dh_installdocs -a install -d debian/samtools/usr/share/doc/samtools cp --reflink=auto -a ./AUTHORS debian/samtools/usr/share/doc/samtools cp --reflink=auto -a ./README debian/samtools/usr/share/doc/samtools chmod -R u\+rw,go=rX debian/samtools/usr/share/doc install -p -m0644 debian/README.Debian debian/samtools/usr/share/doc/samtools/README.Debian install -p -m0644 debian/copyright debian/samtools/usr/share/doc/samtools/copyright rm -f debian/samtools.debhelper.log debian/rules override_dh_installchangelogs make[1]: Entering directory '/<>' dh_installchangelogs NEWS install -p -m0644 debian/changelog debian/samtools/usr/share/doc/samtools/changelog.Debian install -p -m0644 debian/NEWS debian/samtools/usr/share/doc/samtools/NEWS.Debian install -p -m0644 NEWS debian/samtools/usr/share/doc/samtools/changelog make[1]: Leaving directory '/<>' dh_installexamples -a install -d debian/samtools/usr/share/doc/samtools/examples cp --reflink=auto -a ./examples/00README.txt debian/samtools/usr/share/doc/samtools/examples cp --reflink=auto -a ./examples/ex1.fa debian/samtools/usr/share/doc/samtools/examples cp --reflink=auto -a ./examples/ex1.sam.gz debian/samtools/usr/share/doc/samtools/examples cp --reflink=auto -a ./examples/toy.fa debian/samtools/usr/share/doc/samtools/examples cp --reflink=auto -a ./examples/toy.sam debian/samtools/usr/share/doc/samtools/examples dh_installman -a rm -f debian/samtools/usr/share/man/man1/samtools-fastq.1 ln -s samtools-fasta.1 debian/samtools/usr/share/man/man1/samtools-fastq.1 man-recode --to-code UTF-8 --suffix .dh-new debian/samtools/usr/share/man/man1/ace2sam.1 debian/samtools/usr/share/man/man1/samtools-addreplacerg.1 debian/samtools/usr/share/man/man1/samtools-bedcov.1 debian/samtools/usr/share/man/man1/samtools-calmd.1 debian/samtools/usr/share/man/man1/samtools-cat.1 debian/samtools/usr/share/man/man1/samtools-collate.1 debian/samtools/usr/share/man/man1/samtools-depad.1 debian/samtools/usr/share/man/man1/samtools-depth.1 debian/samtools/usr/share/man/man1/samtools-dict.1 debian/samtools/usr/share/man/man1/samtools-faidx.1 debian/samtools/usr/share/man/man1/samtools-fasta.1 debian/samtools/usr/share/man/man1/samtools-fixmate.1 debian/samtools/usr/share/man/man1/samtools-flags.1 debian/samtools/usr/share/man/man1/samtools-flagstat.1 debian/samtools/usr/share/man/man1/samtools-fqidx.1 debian/samtools/usr/share/man/man1/samtools-idxstats.1 debian/samtools/usr/share/man/man1/samtools-index.1 debian/samtools/usr/share/man/man1/samtools-markdup.1 debian/samtools/usr/share/man/man1/samtools-merge.1 debian/samtools/usr/share/man/man1/samtools-mpileup.1 debian/samtools/usr/share/man/man1/samtools-phase.1 debian/samtools/usr/share/man/man1/samtools-quickcheck.1 debian/samtools/usr/share/man/man1/samtools-reheader.1 debian/samtools/usr/share/man/man1/samtools-rmdup.1 debian/samtools/usr/share/man/man1/samtools-sort.1 debian/samtools/usr/share/man/man1/samtools-split.1 debian/samtools/usr/share/man/man1/samtools-stats.1 debian/samtools/usr/share/man/man1/samtools-targetcut.1 debian/samtools/usr/share/man/man1/samtools-tview.1 debian/samtools/usr/share/man/man1/samtools-view.1 debian/samtools/usr/share/man/man1/samtools.1 debian/samtools/usr/share/man/man1/samtools.pl.1 debian/samtools/usr/share/man/man1/wgsim.1 mv debian/samtools/usr/share/man/man1/ace2sam.1.dh-new debian/samtools/usr/share/man/man1/ace2sam.1 mv debian/samtools/usr/share/man/man1/samtools-addreplacerg.1.dh-new debian/samtools/usr/share/man/man1/samtools-addreplacerg.1 mv debian/samtools/usr/share/man/man1/samtools-bedcov.1.dh-new debian/samtools/usr/share/man/man1/samtools-bedcov.1 mv debian/samtools/usr/share/man/man1/samtools-calmd.1.dh-new debian/samtools/usr/share/man/man1/samtools-calmd.1 mv debian/samtools/usr/share/man/man1/samtools-cat.1.dh-new debian/samtools/usr/share/man/man1/samtools-cat.1 mv debian/samtools/usr/share/man/man1/samtools-collate.1.dh-new debian/samtools/usr/share/man/man1/samtools-collate.1 mv debian/samtools/usr/share/man/man1/samtools-depad.1.dh-new debian/samtools/usr/share/man/man1/samtools-depad.1 mv debian/samtools/usr/share/man/man1/samtools-depth.1.dh-new debian/samtools/usr/share/man/man1/samtools-depth.1 mv debian/samtools/usr/share/man/man1/samtools-dict.1.dh-new debian/samtools/usr/share/man/man1/samtools-dict.1 mv debian/samtools/usr/share/man/man1/samtools-faidx.1.dh-new debian/samtools/usr/share/man/man1/samtools-faidx.1 mv debian/samtools/usr/share/man/man1/samtools-fasta.1.dh-new debian/samtools/usr/share/man/man1/samtools-fasta.1 mv debian/samtools/usr/share/man/man1/samtools-fixmate.1.dh-new debian/samtools/usr/share/man/man1/samtools-fixmate.1 mv debian/samtools/usr/share/man/man1/samtools-flags.1.dh-new debian/samtools/usr/share/man/man1/samtools-flags.1 mv debian/samtools/usr/share/man/man1/samtools-flagstat.1.dh-new debian/samtools/usr/share/man/man1/samtools-flagstat.1 mv debian/samtools/usr/share/man/man1/samtools-fqidx.1.dh-new debian/samtools/usr/share/man/man1/samtools-fqidx.1 mv debian/samtools/usr/share/man/man1/samtools-idxstats.1.dh-new debian/samtools/usr/share/man/man1/samtools-idxstats.1 mv debian/samtools/usr/share/man/man1/samtools-index.1.dh-new debian/samtools/usr/share/man/man1/samtools-index.1 mv debian/samtools/usr/share/man/man1/samtools-markdup.1.dh-new debian/samtools/usr/share/man/man1/samtools-markdup.1 mv debian/samtools/usr/share/man/man1/samtools-merge.1.dh-new debian/samtools/usr/share/man/man1/samtools-merge.1 mv debian/samtools/usr/share/man/man1/samtools-mpileup.1.dh-new debian/samtools/usr/share/man/man1/samtools-mpileup.1 mv debian/samtools/usr/share/man/man1/samtools-phase.1.dh-new debian/samtools/usr/share/man/man1/samtools-phase.1 mv debian/samtools/usr/share/man/man1/samtools-quickcheck.1.dh-new debian/samtools/usr/share/man/man1/samtools-quickcheck.1 mv debian/samtools/usr/share/man/man1/samtools-reheader.1.dh-new debian/samtools/usr/share/man/man1/samtools-reheader.1 mv debian/samtools/usr/share/man/man1/samtools-rmdup.1.dh-new debian/samtools/usr/share/man/man1/samtools-rmdup.1 mv debian/samtools/usr/share/man/man1/samtools-sort.1.dh-new debian/samtools/usr/share/man/man1/samtools-sort.1 mv debian/samtools/usr/share/man/man1/samtools-split.1.dh-new debian/samtools/usr/share/man/man1/samtools-split.1 mv debian/samtools/usr/share/man/man1/samtools-stats.1.dh-new debian/samtools/usr/share/man/man1/samtools-stats.1 mv debian/samtools/usr/share/man/man1/samtools-targetcut.1.dh-new debian/samtools/usr/share/man/man1/samtools-targetcut.1 mv debian/samtools/usr/share/man/man1/samtools-tview.1.dh-new debian/samtools/usr/share/man/man1/samtools-tview.1 mv debian/samtools/usr/share/man/man1/samtools-view.1.dh-new debian/samtools/usr/share/man/man1/samtools-view.1 mv debian/samtools/usr/share/man/man1/samtools.1.dh-new debian/samtools/usr/share/man/man1/samtools.1 mv debian/samtools/usr/share/man/man1/samtools.pl.1.dh-new debian/samtools/usr/share/man/man1/samtools.pl.1 mv debian/samtools/usr/share/man/man1/wgsim.1.dh-new debian/samtools/usr/share/man/man1/wgsim.1 chmod 0644 -- debian/samtools/usr/share/man/man1/ace2sam.1 debian/samtools/usr/share/man/man1/samtools-addreplacerg.1 debian/samtools/usr/share/man/man1/samtools-bedcov.1 debian/samtools/usr/share/man/man1/samtools-calmd.1 debian/samtools/usr/share/man/man1/samtools-cat.1 debian/samtools/usr/share/man/man1/samtools-collate.1 debian/samtools/usr/share/man/man1/samtools-depad.1 debian/samtools/usr/share/man/man1/samtools-depth.1 debian/samtools/usr/share/man/man1/samtools-dict.1 debian/samtools/usr/share/man/man1/samtools-faidx.1 debian/samtools/usr/share/man/man1/samtools-fasta.1 debian/samtools/usr/share/man/man1/samtools-fixmate.1 debian/samtools/usr/share/man/man1/samtools-flags.1 debian/samtools/usr/share/man/man1/samtools-flagstat.1 debian/samtools/usr/share/man/man1/samtools-fqidx.1 debian/samtools/usr/share/man/man1/samtools-idxstats.1 debian/samtools/usr/share/man/man1/samtools-index.1 debian/samtools/usr/share/man/man1/samtools-markdup.1 debian/samtools/usr/share/man/man1/samtools-merge.1 debian/samtools/usr/share/man/man1/samtools-mpileup.1 debian/samtools/usr/share/man/man1/samtools-phase.1 debian/samtools/usr/share/man/man1/samtools-quickcheck.1 debian/samtools/usr/share/man/man1/samtools-reheader.1 debian/samtools/usr/share/man/man1/samtools-rmdup.1 debian/samtools/usr/share/man/man1/samtools-sort.1 debian/samtools/usr/share/man/man1/samtools-split.1 debian/samtools/usr/share/man/man1/samtools-stats.1 debian/samtools/usr/share/man/man1/samtools-targetcut.1 debian/samtools/usr/share/man/man1/samtools-tview.1 debian/samtools/usr/share/man/man1/samtools-view.1 debian/samtools/usr/share/man/man1/samtools.1 debian/samtools/usr/share/man/man1/samtools.pl.1 debian/samtools/usr/share/man/man1/wgsim.1 dh_lintian -a install -d debian/samtools/usr/share/lintian/overrides install -p -m0644 debian/samtools.lintian-overrides debian/samtools/usr/share/lintian/overrides/samtools dh_perl -a (grep -a -s -v perl:Depends debian/samtools.substvars; echo perl:Depends=perl:any) > debian/samtools.substvars.new mv debian/samtools.substvars.new debian/samtools.substvars dh_link -a rm -f debian/samtools/usr/share/man/man1/samtools-fastq.1 ln -s samtools-fasta.1 debian/samtools/usr/share/man/man1/samtools-fastq.1 dh_strip_nondeterminism -a Using 1592559700 as canonical time Normalizing debian/samtools/usr/share/doc/samtools/examples/ex1.sam.gz using File::StripNondeterminism::handlers::gzip dh_compress -a cd debian/samtools chmod a-x usr/share/doc/samtools/NEWS.Debian usr/share/doc/samtools/changelog usr/share/doc/samtools/changelog.Debian usr/share/man/man1/ace2sam.1 usr/share/man/man1/samtools-addreplacerg.1 usr/share/man/man1/samtools-bedcov.1 usr/share/man/man1/samtools-calmd.1 usr/share/man/man1/samtools-cat.1 usr/share/man/man1/samtools-collate.1 usr/share/man/man1/samtools-depad.1 usr/share/man/man1/samtools-depth.1 usr/share/man/man1/samtools-dict.1 usr/share/man/man1/samtools-faidx.1 usr/share/man/man1/samtools-fasta.1 usr/share/man/man1/samtools-fixmate.1 usr/share/man/man1/samtools-flags.1 usr/share/man/man1/samtools-flagstat.1 usr/share/man/man1/samtools-fqidx.1 usr/share/man/man1/samtools-idxstats.1 usr/share/man/man1/samtools-index.1 usr/share/man/man1/samtools-markdup.1 usr/share/man/man1/samtools-merge.1 usr/share/man/man1/samtools-mpileup.1 usr/share/man/man1/samtools-phase.1 usr/share/man/man1/samtools-quickcheck.1 usr/share/man/man1/samtools-reheader.1 usr/share/man/man1/samtools-rmdup.1 usr/share/man/man1/samtools-sort.1 usr/share/man/man1/samtools-split.1 usr/share/man/man1/samtools-stats.1 usr/share/man/man1/samtools-targetcut.1 usr/share/man/man1/samtools-tview.1 usr/share/man/man1/samtools-view.1 usr/share/man/man1/samtools.1 usr/share/man/man1/samtools.pl.1 usr/share/man/man1/wgsim.1 gzip -9nf usr/share/doc/samtools/NEWS.Debian usr/share/doc/samtools/changelog usr/share/doc/samtools/changelog.Debian usr/share/man/man1/ace2sam.1 usr/share/man/man1/samtools-addreplacerg.1 usr/share/man/man1/samtools-bedcov.1 usr/share/man/man1/samtools-calmd.1 usr/share/man/man1/samtools-cat.1 usr/share/man/man1/samtools-collate.1 usr/share/man/man1/samtools-depad.1 usr/share/man/man1/samtools-depth.1 usr/share/man/man1/samtools-dict.1 usr/share/man/man1/samtools-faidx.1 usr/share/man/man1/samtools-fasta.1 usr/share/man/man1/samtools-fixmate.1 usr/share/man/man1/samtools-flags.1 usr/share/man/man1/samtools-flagstat.1 usr/share/man/man1/samtools-fqidx.1 usr/share/man/man1/samtools-idxstats.1 usr/share/man/man1/samtools-index.1 usr/share/man/man1/samtools-markdup.1 usr/share/man/man1/samtools-merge.1 usr/share/man/man1/samtools-mpileup.1 usr/share/man/man1/samtools-phase.1 usr/share/man/man1/samtools-quickcheck.1 usr/share/man/man1/samtools-reheader.1 usr/share/man/man1/samtools-rmdup.1 usr/share/man/man1/samtools-sort.1 usr/share/man/man1/samtools-split.1 usr/share/man/man1/samtools-stats.1 usr/share/man/man1/samtools-targetcut.1 usr/share/man/man1/samtools-tview.1 usr/share/man/man1/samtools-view.1 usr/share/man/man1/samtools.1 usr/share/man/man1/samtools.pl.1 usr/share/man/man1/wgsim.1 cd '/<>' rm -f debian/samtools/usr/share/man/man1/samtools-fastq.1 debian/samtools/usr/share/man/man1/samtools-fastq.1.gz ln -s samtools-fasta.1.gz debian/samtools/usr/share/man/man1/samtools-fastq.1.gz dh_fixperms -a find debian/samtools ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/samtools/usr/share/doc -type f -a -true -a ! -regex 'debian/samtools/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/samtools/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/samtools/usr/share/man debian/samtools/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/samtools -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/samtools/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing -a dh_dwz -a -a install -d debian/samtools/usr/lib/debug/.dwz/powerpc64le-linux-gnu dwz -mdebian/samtools/usr/lib/debug/.dwz/powerpc64le-linux-gnu/samtools.debug -M/usr/lib/debug/.dwz/powerpc64le-linux-gnu/samtools.debug -- debian/samtools/usr/bin/ace2sam debian/samtools/usr/bin/maq2sam-long debian/samtools/usr/bin/maq2sam-short debian/samtools/usr/bin/md5fa debian/samtools/usr/bin/md5sum-lite debian/samtools/usr/bin/samtools debian/samtools/usr/bin/wgsim dwz: debian/samtools/usr/bin/samtools: DWARF compression not beneficial - old size 603128 new size 625660 powerpc64le-linux-gnu-objcopy --compress-debug-sections debian/samtools/usr/lib/debug/.dwz/powerpc64le-linux-gnu/samtools.debug dh_strip -a -a install -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/91 powerpc64le-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/wgsim debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/91/f587559cb5d855873548e12c5691f7dd592a36.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/91/f587559cb5d855873548e12c5691f7dd592a36.debug powerpc64le-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/samtools/usr/bin/wgsim powerpc64le-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/91/f587559cb5d855873548e12c5691f7dd592a36.debug debian/samtools/usr/bin/wgsim install -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/a4 powerpc64le-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/md5sum-lite debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/a4/d629f1ed4cd578762859fcfcfc8d8c354134be.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/a4/d629f1ed4cd578762859fcfcfc8d8c354134be.debug powerpc64le-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/samtools/usr/bin/md5sum-lite powerpc64le-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/a4/d629f1ed4cd578762859fcfcfc8d8c354134be.debug debian/samtools/usr/bin/md5sum-lite install -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/66 powerpc64le-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/md5fa debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/66/7afb980f2739fbb2beccabe9bce191ff56b5e8.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/66/7afb980f2739fbb2beccabe9bce191ff56b5e8.debug powerpc64le-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/samtools/usr/bin/md5fa powerpc64le-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/66/7afb980f2739fbb2beccabe9bce191ff56b5e8.debug debian/samtools/usr/bin/md5fa install -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/2b powerpc64le-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/maq2sam-short debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/2b/cb63c0b9687fb5f320f6aecf53131df0c2651f.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/2b/cb63c0b9687fb5f320f6aecf53131df0c2651f.debug powerpc64le-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/samtools/usr/bin/maq2sam-short powerpc64le-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/2b/cb63c0b9687fb5f320f6aecf53131df0c2651f.debug debian/samtools/usr/bin/maq2sam-short install -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/ab powerpc64le-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/maq2sam-long debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/ab/423b1766bbbd409346ac792f0bc761ba03f572.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/ab/423b1766bbbd409346ac792f0bc761ba03f572.debug powerpc64le-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/samtools/usr/bin/maq2sam-long powerpc64le-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/ab/423b1766bbbd409346ac792f0bc761ba03f572.debug debian/samtools/usr/bin/maq2sam-long install -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/79 powerpc64le-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/ace2sam debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/79/f59a1240ca10cbdc388f67647ff7701a28272b.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/79/f59a1240ca10cbdc388f67647ff7701a28272b.debug powerpc64le-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/samtools/usr/bin/ace2sam powerpc64le-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/79/f59a1240ca10cbdc388f67647ff7701a28272b.debug debian/samtools/usr/bin/ace2sam install -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/04 powerpc64le-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/samtools debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/04/2e7fd2656a8584d004d7b3b731e68864406056.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/04/2e7fd2656a8584d004d7b3b731e68864406056.debug powerpc64le-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/samtools/usr/bin/samtools powerpc64le-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/04/2e7fd2656a8584d004d7b3b731e68864406056.debug debian/samtools/usr/bin/samtools install -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/samtools/usr/lib/debug/.dwz/powerpc64le-linux-gnu debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/samtools/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/samtools/usr/lib/debug install -d debian/.debhelper/samtools/dbgsym-root/usr/share/doc ln -s samtools debian/.debhelper/samtools/dbgsym-root/usr/share/doc/samtools-dbgsym dh_makeshlibs -a -a rm -f debian/samtools/DEBIAN/shlibs dh_shlibdeps -a -a install -d debian/samtools/DEBIAN dpkg-shlibdeps -Tdebian/samtools.substvars debian/samtools/usr/bin/samtools debian/samtools/usr/bin/ace2sam debian/samtools/usr/bin/maq2sam-long debian/samtools/usr/bin/maq2sam-short debian/samtools/usr/bin/md5fa debian/samtools/usr/bin/md5sum-lite debian/samtools/usr/bin/wgsim dh_installdeb -a dh_gencontrol -a echo misc:Depends= >> debian/samtools.substvars echo misc:Pre-Depends= >> debian/samtools.substvars install -d debian/.debhelper/samtools/dbgsym-root/DEBIAN dpkg-gencontrol -psamtools -ldebian/changelog -Tdebian/samtools.substvars -Pdebian/.debhelper/samtools/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -DPackage=samtools-dbgsym "-DDepends=samtools (= \${binary:Version})" "-DDescription=debug symbols for samtools" "-DBuild-Ids=042e7fd2656a8584d004d7b3b731e68864406056 2bcb63c0b9687fb5f320f6aecf53131df0c2651f 667afb980f2739fbb2beccabe9bce191ff56b5e8 79f59a1240ca10cbdc388f67647ff7701a28272b 91f587559cb5d855873548e12c5691f7dd592a36 a4d629f1ed4cd578762859fcfcfc8d8c354134be ab423b1766bbbd409346ac792f0bc761ba03f572" -DSection=debug -UMulti-Arch -UReplaces -UBreaks dpkg-gencontrol: warning: package samtools: substitution variable ${perl:Depends} unused, but is defined chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/DEBIAN/control dpkg-gencontrol -psamtools -ldebian/changelog -Tdebian/samtools.substvars -Pdebian/samtools dpkg-gencontrol: warning: package samtools: substitution variable ${perl:Depends} unused, but is defined chmod 0644 -- debian/samtools/DEBIAN/control dh_md5sums -a cd debian/samtools >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/samtools/DEBIAN/md5sums cd debian/.debhelper/samtools/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/DEBIAN/md5sums dh_builddeb -a dpkg-deb --root-owner-group --build debian/samtools .. dpkg-deb: building package 'samtools' in '../samtools_1.10-4_ppc64el.deb'. dpkg-deb --root-owner-group --build debian/.debhelper/samtools/dbgsym-root .. dpkg-deb: building package 'samtools-dbgsym' in '../samtools-dbgsym_1.10-4_ppc64el.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../samtools_1.10-4_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-source: info: using options from samtools-1.10/debian/source/options: --single-debian-patch --extend-diff-ignore=^(\.travis.*|README.md)$ dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-08-27T02:11:13Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ samtools_1.10-4_ppc64el.changes: -------------------------------- Format: 1.8 Date: Fri, 19 Jun 2020 11:41:40 +0200 Source: samtools Binary: samtools samtools-dbgsym Built-For-Profiles: cross nocheck Architecture: ppc64el Version: 1.10-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: samtools - processing sequence alignments in SAM, BAM and CRAM formats Closes: 963093 Changes: samtools (1.10-4) unstable; urgency=medium . * cwltools only "Suggests" not "Recommends" * There are no Python scripts provided in samtools any more Closes: #963093 * Standards-Version: 4.5.0 (routine-update) * debhelper-compat 13 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) Checksums-Sha1: 52064d352741b40cac6db8c1031cf0bc2441bf5e 773556 samtools-dbgsym_1.10-4_ppc64el.deb c39ab74a07481502eb6d213c205078f8db068d8f 5514 samtools_1.10-4_ppc64el.buildinfo a2d8a78e67d679faa12442bd055cc76ba6a86422 530136 samtools_1.10-4_ppc64el.deb Checksums-Sha256: bd191899e68e4c474ff8c400bc6bef5a007852911f3b4d70c6e0134ea4c187d5 773556 samtools-dbgsym_1.10-4_ppc64el.deb 601fcd3fa2121fc9c293f3ae7f0f3942acfbac184ee7c32ded0c66f6c1d40b31 5514 samtools_1.10-4_ppc64el.buildinfo e1de4e79f364b0013e082c5defd82d9a0b2c062ba8f7a0cb780c8a297845420f 530136 samtools_1.10-4_ppc64el.deb Files: 9ff9199a8668cdcd82bfc5ee25508dda 773556 debug optional samtools-dbgsym_1.10-4_ppc64el.deb 7ba0702fcea044c095dc0d8134ffb034 5514 science optional samtools_1.10-4_ppc64el.buildinfo e16b8f5526da3efe194cdc3d3b447bd5 530136 science optional samtools_1.10-4_ppc64el.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: samtools Binary: samtools samtools-dbgsym Architecture: ppc64el Version: 1.10-4 Checksums-Md5: 9ff9199a8668cdcd82bfc5ee25508dda 773556 samtools-dbgsym_1.10-4_ppc64el.deb e16b8f5526da3efe194cdc3d3b447bd5 530136 samtools_1.10-4_ppc64el.deb Checksums-Sha1: 52064d352741b40cac6db8c1031cf0bc2441bf5e 773556 samtools-dbgsym_1.10-4_ppc64el.deb a2d8a78e67d679faa12442bd055cc76ba6a86422 530136 samtools_1.10-4_ppc64el.deb Checksums-Sha256: bd191899e68e4c474ff8c400bc6bef5a007852911f3b4d70c6e0134ea4c187d5 773556 samtools-dbgsym_1.10-4_ppc64el.deb e1de4e79f364b0013e082c5defd82d9a0b2c062ba8f7a0cb780c8a297845420f 530136 samtools_1.10-4_ppc64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Thu, 27 Aug 2020 02:11:13 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11.1), autoconf-archive (= 20190106-2.1), automake (= 1:1.16.2-3), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-7), bash-completion (= 1:2.11-2), binutils (= 2.35-2), binutils-common (= 2.35-2), binutils-x86-64-linux-gnu (= 2.35-2), bsdextrautils (= 2.36-2), bsdutils (= 1:2.36-2), build-essential (= 12.8), bzip2 (= 1.0.8-4), coreutils (= 8.32-3), cpp (= 4:10.1.0-1), cpp-10 (= 10.2.0-5), dash (= 0.5.10.2-7), debconf (= 1.5.74), debhelper (= 13.2), debianutils (= 4.11.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.9.0-1), diffutils (= 1:3.7-3), dpkg (= 1.20.5), dpkg-dev (= 1.20.5), dwz (= 0.13-5), file (= 1:5.38-5), findutils (= 4.7.0-1), g++ (= 4:10.1.0-1), g++-10 (= 10.2.0-5), gcc (= 4:10.1.0-1), gcc-10 (= 10.2.0-5), gcc-10-base (= 10.2.0-5), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), grep (= 3.4-1), groff-base (= 1.22.4-5), gzip (= 1.10-2), hostname (= 3.23), init-system-helpers (= 1.58), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libarchive-zip-perl (= 1.68-1), libasan6 (= 10.2.0-5), libatomic1 (= 10.2.0-5), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3), libaudit1 (= 1:2.8.5-3+b1), libbinutils (= 2.35-2), libblkid1 (= 2.36-2), libbrotli1 (= 1.0.7-7), libbz2-1.0 (= 1.0.8-4), libbz2-dev (= 1.0.8-4), libc-bin (= 2.31-3), libc-dev-bin (= 2.31-3), libc6 (= 2.31-3), libc6-dev (= 2.31-3), libcap-ng0 (= 0.7.9-2.2), libcc1-0 (= 10.2.0-5), libcom-err2 (= 1.45.6-1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.17-1), libcrypt1 (= 1:4.4.17-1), libctf-nobfd0 (= 2.35-2), libctf0 (= 2.35-2), libcurl3-gnutls (= 7.72.0-1), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.253), libdebhelper-perl (= 13.2), libdeflate0 (= 1.6-1), libdpkg-perl (= 1.20.5), libelf1 (= 0.180-1+b1), libffi7 (= 3.3-4), libfile-stripnondeterminism-perl (= 1.9.0-1), libgcc-10-dev (= 10.2.0-5), libgcc-s1 (= 10.2.0-5), libgcrypt20 (= 1.8.6-2), libgdbm-compat4 (= 1.18.1-5.1), libgdbm6 (= 1.18.1-5.1), libglib2.0-0 (= 2.64.4-1), libgmp10 (= 2:6.2.0+dfsg-6), libgnutls30 (= 3.6.14-2+b1), libgomp1 (= 10.2.0-5), libgpg-error0 (= 1.38-2), libgssapi-krb5-2 (= 1.17-10), libhogweed6 (= 3.6-2), libhts-dev (= 1.10.2-5), libhts3 (= 1.10.2-5), libicu67 (= 67.1-4), libidn2-0 (= 2.3.0-1), libisl22 (= 0.22.1-1), libitm1 (= 10.2.0-5), libk5crypto3 (= 1.17-10), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.17-10), libkrb5support0 (= 1.17-10), libldap-2.4-2 (= 2.4.51+dfsg-1), liblsan0 (= 10.2.0-5), liblz4-1 (= 1.9.2-2), liblzma-dev (= 5.2.4-1+b1), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-5), libmagic1 (= 1:5.38-5), libmount1 (= 2.36-2), libmpc3 (= 1.2.0~rc1-1), libmpfr6 (= 4.1.0-3), libncurses-dev (= 6.2-1), libncurses5-dev (= 6.2-1), libncurses6 (= 6.2-1), libncursesw6 (= 6.2-1), libnettle8 (= 3.6-2), libnghttp2-14 (= 1.41.0-3), libp11-kit0 (= 0.23.21-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-13), libperl5.30 (= 5.30.3-4), libpipeline1 (= 1.5.3-1), libpsl5 (= 0.21.0-1.1), libquadmath0 (= 10.2.0-5), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2), libsasl2-2 (= 2.1.27+dfsg-2), libsasl2-modules-db (= 2.1.27+dfsg-2), libseccomp2 (= 2.4.3-1+b1), libselinux1 (= 3.1-2), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.36-2), libssh2-1 (= 1.8.0-2.1), libssl1.1 (= 1.1.1g-1), libstdc++-10-dev (= 10.2.0-5), libstdc++6 (= 10.2.0-5), libsub-override-perl (= 0.09-2), libsystemd0 (= 246.2-1), libtasn1-6 (= 4.16.0-2), libtinfo6 (= 6.2-1), libtool (= 2.4.6-14), libtsan0 (= 10.2.0-5), libubsan1 (= 10.2.0-5), libuchardet0 (= 0.0.7-1), libudev1 (= 246.2-1), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36-2), libxml2 (= 2.9.10+dfsg-5+b1), libzstd1 (= 1.4.5+dfsg-4), linux-libc-dev (= 5.7.17-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.3-4), man-db (= 2.9.3-2), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2-1), ncurses-bin (= 6.2-1), patch (= 2.7.6-6), perl (= 5.30.3-4), perl-base (= 5.30.3-4), perl-modules-5.30 (= 5.30.3-4), pkg-config (= 0.29.2-1), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-4), tabix (= 1.10.2-5), tar (= 1.30+dfsg-7), util-linux (= 2.36-2), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1592559700" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ samtools-dbgsym_1.10-4_ppc64el.deb ---------------------------------- new Debian package, version 2.0. size 773556 bytes: control archive=900 bytes. 620 bytes, 12 lines control 832 bytes, 8 lines md5sums Package: samtools-dbgsym Source: samtools Version: 1.10-4 Auto-Built-Package: debug-symbols Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 863 Depends: samtools (= 1.10-4) Section: debug Priority: optional Description: debug symbols for samtools Build-Ids: 042e7fd2656a8584d004d7b3b731e68864406056 2bcb63c0b9687fb5f320f6aecf53131df0c2651f 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2020-06-19 09:41 ./usr/lib/debug/.dwz/powerpc64le-linux-gnu/samtools.debug drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/share/ drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-06-19 09:41 ./usr/share/doc/samtools-dbgsym -> samtools samtools_1.10-4_ppc64el.deb --------------------------- new Debian package, version 2.0. size 530136 bytes: control archive=2688 bytes. 891 bytes, 18 lines control 4792 bytes, 71 lines md5sums Package: samtools Version: 1.10-4 Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 1610 Depends: libc6 (>= 2.29), libhts3 (>= 1.10), libncurses6 (>= 6), libtinfo6 (>= 6), zlib1g (>= 1:1.1.4) Suggests: cwltool Breaks: bio-tradis (<= 1.4.5+dfsg-1), iva (<= 1.0.9+ds-6) Section: science Priority: optional Homepage: http://www.htslib.org/ Description: processing sequence alignments in SAM, BAM and CRAM formats Samtools is a set of utilities that manipulate nucleotide sequence alignments in the binary BAM format. It imports from and exports to the ascii SAM (Sequence Alignment/Map) and CRAM formats, does sorting, merging and indexing, and allows one to retrieve reads in any regions swiftly. It is designed to work on a stream, and is able to open a BAM or CRAM (not SAM) file on a remote FTP or HTTP server. drwxr-xr-x root/root 0 2020-06-19 09:41 ./ drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/ drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/bin/ -rwxr-xr-x root/root 67744 2020-06-19 09:41 ./usr/bin/ace2sam -rwxr-xr-x root/root 5437 2020-06-19 09:41 ./usr/bin/blast2sam.pl -rwxr-xr-x root/root 3360 2020-06-19 09:41 ./usr/bin/bowtie2sam.pl -rwxr-xr-x root/root 17996 2020-06-19 09:41 ./usr/bin/export2sam.pl -rwxr-xr-x root/root 6121 2020-06-19 09:41 ./usr/bin/interpolate_sam.pl -rwxr-xr-x root/root 67744 2020-06-19 09:41 ./usr/bin/maq2sam-long -rwxr-xr-x root/root 67744 2020-06-19 09:41 ./usr/bin/maq2sam-short -rwxr-xr-x root/root 67744 2020-06-19 09:41 ./usr/bin/md5fa -rwxr-xr-x root/root 67744 2020-06-19 09:41 ./usr/bin/md5sum-lite -rwxr-xr-x root/root 7969 2020-06-19 09:41 ./usr/bin/novo2sam.pl -rwxr-xr-x root/root 50473 2020-06-19 09:41 ./usr/bin/plot-bamstats -rwxr-xr-x 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2019-12-06 16:40 ./usr/share/doc/samtools/examples/ex1.fa -rw-r--r-- root/root 114565 2020-06-19 09:41 ./usr/share/doc/samtools/examples/ex1.sam.gz -rw-r--r-- root/root 98 2019-12-06 16:40 ./usr/share/doc/samtools/examples/toy.fa -rw-r--r-- root/root 786 2019-12-06 16:40 ./usr/share/doc/samtools/examples/toy.sam drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/share/lintian/ drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 220 2020-06-19 09:41 ./usr/share/lintian/overrides/samtools drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/share/man/ drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/share/man/man1/ -rw-r--r-- root/root 462 2020-06-19 09:41 ./usr/share/man/man1/ace2sam.1.gz -rw-r--r-- root/root 1498 2020-06-19 09:41 ./usr/share/man/man1/samtools-addreplacerg.1.gz -rw-r--r-- root/root 1451 2020-06-19 09:41 ./usr/share/man/man1/samtools-bedcov.1.gz -rw-r--r-- root/root 1797 2020-06-19 09:41 ./usr/share/man/man1/samtools-calmd.1.gz -rw-r--r-- 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5927 2020-06-19 09:41 ./usr/share/man/man1/samtools-stats.1.gz -rw-r--r-- root/root 1425 2020-06-19 09:41 ./usr/share/man/man1/samtools-targetcut.1.gz -rw-r--r-- root/root 1630 2020-06-19 09:41 ./usr/share/man/man1/samtools-tview.1.gz -rw-r--r-- root/root 4612 2020-06-19 09:41 ./usr/share/man/man1/samtools-view.1.gz -rw-r--r-- root/root 11236 2020-06-19 09:41 ./usr/share/man/man1/samtools.1.gz -rw-r--r-- root/root 410 2020-06-19 09:41 ./usr/share/man/man1/samtools.pl.1.gz -rw-r--r-- root/root 518 2020-06-19 09:41 ./usr/share/man/man1/wgsim.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [634 B] Get:5 copy:/<>/apt_archive ./ Packages [702 B] Fetched 2299 B in 0s (95.4 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmetrics-any-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libstruct-dumb-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtest-metrics-any-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common t1utils unzip Suggested packages: libxml-parser-perl libdata-dump-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmetrics-any-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libstruct-dumb-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtest-metrics-any-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common sbuild-build-depends-lintian-dummy:ppc64el t1utils unzip 0 upgraded, 96 newly installed, 0 to remove and 0 not upgraded. Need to get 8054 kB of archives. After this operation, 23.3 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [856 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-4 [72.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-4 [160 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.63-1 [35.6 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.3-7.1 [50.5 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.20-1 [532 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.33.0-1 [790 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.20-1 [894 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libaliased-perl all 0.34-1 [13.8 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b3 [71.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b2 [11.3 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1 [12.6 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b1 [15.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b2 [25.6 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1 [12.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b2 [46.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.24-1 [18.6 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b5 [38.4 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1 [15.1 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-tiny-perl all 2.24-1 [16.2 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.21-1 [128 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libexception-class-perl all 1.44-1 [32.3 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-perl all 0.03+ds1-1 [18.9 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-1 [14.2 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002002-1 [37.8 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b5 [63.6 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-util-perl amd64 1.07-3+b5 [22.9 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-install-perl all 0.928-1 [11.4 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-optlist-perl all 0.110-1 [10.6 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-perl all 0.987-1 [47.2 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-messagepack-perl amd64 1.00-4 [38.3 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-domain-perl all 0.10-1 [12.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b1 [26.0 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-address-xs-perl amd64 1.04-1+b2 [28.1 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1 [7642 B] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.11-1 [8888 B] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1 [317 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.45-1 [84.4 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-4 [13.0 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-2 [90.2 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-5 [105 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.12-1 [12.9 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libmetrics-any-perl all 0.06-1 [41.8 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libtest-metrics-any-perl all 0.01-2 [7060 B] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.77-3 [274 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.8 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-loop-epoll-perl all 0.21-1 [12.1 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004002-1 [13.1 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-utilsby-perl all 0.11-1 [15.4 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.004000-1 [59.4 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1 [10.2 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libmouse-perl amd64 2.5.10-1 [173 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b2 [12.0 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1 [13.5 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.114-1 [53.6 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-gzip-perl amd64 0.19-1+b6 [17.4 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libproc-processtable-perl amd64 0.59-2 [45.7 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.018+ds-1 [98.9 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.018+ds-1 [103 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-4+b7 [8696 B] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.8-1 [198 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b2 [75.1 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-1 [39.2 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.010004-1 [339 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b1 [20.2 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-writer-perl all 0.625-1 [29.7 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.82+repack-1 [35.6 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.21-8 [84.3 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-1 [83.4 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-25 [172 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.91.0 [1282 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 8054 kB in 0s (42.5 MB/s) Selecting previously unselected package readline-common. (Reading database ... 23411 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.3-7.1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7.1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../04-gpgconf_2.2.20-1_amd64.deb ... Unpacking gpgconf (2.2.20-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../05-libsqlite3-0_3.33.0-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.33.0-1) ... Selecting previously unselected package gpg. Preparing to unpack .../06-gpg_2.2.20-1_amd64.deb ... Unpacking gpg (2.2.20-1) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../07-libaliased-perl_0.34-1_all.deb ... Unpacking libaliased-perl (0.34-1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../08-libapt-pkg-perl_0.1.36+b3_amd64.deb ... Unpacking libapt-pkg-perl (0.1.36+b3) ... Selecting previously unselected package libb-hooks-op-check-perl. Preparing to unpack .../09-libb-hooks-op-check-perl_0.22-1+b2_amd64.deb ... Unpacking libb-hooks-op-check-perl (0.22-1+b2) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../10-libdynaloader-functions-perl_0.003-1_all.deb ... Unpacking libdynaloader-functions-perl (0.003-1) ... Selecting previously unselected package libdevel-callchecker-perl. Preparing to unpack .../11-libdevel-callchecker-perl_0.008-1+b1_amd64.deb ... Unpacking libdevel-callchecker-perl (0.008-1+b1) ... Selecting previously unselected package libparams-classify-perl. Preparing to unpack .../12-libparams-classify-perl_0.015-1+b2_amd64.deb ... Unpacking libparams-classify-perl (0.015-1+b2) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../13-libmodule-runtime-perl_0.016-1_all.deb ... Unpacking libmodule-runtime-perl (0.016-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../14-libtry-tiny-perl_0.30-1_all.deb ... Unpacking libtry-tiny-perl (0.30-1) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../15-libmodule-implementation-perl_0.09-1_all.deb ... Unpacking libmodule-implementation-perl (0.09-1) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../16-libsub-exporter-progressive-perl_0.001013-1_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-1) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../17-libvariable-magic-perl_0.62-1+b2_amd64.deb ... Unpacking libvariable-magic-perl (0.62-1+b2) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../18-libb-hooks-endofscope-perl_0.24-1_all.deb ... Unpacking libb-hooks-endofscope-perl (0.24-1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../19-libcapture-tiny-perl_0.48-1_all.deb ... Unpacking libcapture-tiny-perl (0.48-1) ... Selecting previously unselected package libclass-data-inheritable-perl. Preparing to unpack .../20-libclass-data-inheritable-perl_0.08-3_all.deb ... Unpacking libclass-data-inheritable-perl (0.08-3) ... Selecting previously unselected package libclass-method-modifiers-perl. Preparing to unpack .../21-libclass-method-modifiers-perl_2.13-1_all.deb ... Unpacking libclass-method-modifiers-perl (2.13-1) ... Selecting previously unselected package libclass-xsaccessor-perl. Preparing to unpack .../22-libclass-xsaccessor-perl_1.19-3+b5_amd64.deb ... Unpacking libclass-xsaccessor-perl (1.19-3+b5) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../23-libclone-perl_0.45-1_amd64.deb ... Unpacking libclone-perl (0.45-1) ... Selecting previously unselected package libconfig-tiny-perl. Preparing to unpack .../24-libconfig-tiny-perl_2.24-1_all.deb ... Unpacking libconfig-tiny-perl (2.24-1) ... Selecting previously unselected package libcpanel-json-xs-perl. Preparing to unpack .../25-libcpanel-json-xs-perl_4.21-1_amd64.deb ... Unpacking libcpanel-json-xs-perl (4.21-1) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../26-libdevel-stacktrace-perl_2.0400-1_all.deb ... Unpacking libdevel-stacktrace-perl (2.0400-1) ... Selecting previously unselected package libexception-class-perl. Preparing to unpack .../27-libexception-class-perl_1.44-1_all.deb ... Unpacking libexception-class-perl (1.44-1) ... Selecting previously unselected package libiterator-perl. Preparing to unpack .../28-libiterator-perl_0.03+ds1-1_all.deb ... Unpacking libiterator-perl (0.03+ds1-1) ... Selecting previously unselected package libiterator-util-perl. Preparing to unpack .../29-libiterator-util-perl_0.02+ds1-1_all.deb ... Unpacking libiterator-util-perl (0.02+ds1-1) ... Selecting previously unselected package libexporter-tiny-perl. Preparing to unpack .../30-libexporter-tiny-perl_1.002002-1_all.deb ... Unpacking libexporter-tiny-perl (1.002002-1) ... Selecting previously unselected package liblist-moreutils-perl. Preparing to unpack .../31-liblist-moreutils-perl_0.416-1+b5_amd64.deb ... Unpacking liblist-moreutils-perl (0.416-1+b5) ... Selecting previously unselected package libparams-util-perl. Preparing to unpack .../32-libparams-util-perl_1.07-3+b5_amd64.deb ... 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Setting up libclass-xsaccessor-perl (1.19-3+b5) ... Setting up libexporter-tiny-perl (1.002002-1) ... Setting up libfont-ttf-perl (1.06-1) ... Setting up libtext-levenshteinxs-perl (0.03-4+b7) ... Setting up libperlio-gzip-perl (0.19-1+b6) ... Setting up readline-common (8.0-4) ... Setting up libsereal-decoder-perl (4.018+ds-1) ... Setting up liburi-perl (1.76-2) ... Setting up libemail-address-xs-perl (1.04-1+b2) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b5) ... Setting up libreadline8:amd64 (8.0-4) ... Setting up libtype-tiny-perl (1.010004-1) ... Setting up libexception-class-perl (1.44-1) ... Setting up libdevel-callchecker-perl (0.008-1+b1) ... Setting up libtest-metrics-any-perl (0.01-2) ... Setting up libio-async-perl (0.77-3) ... Setting up libdata-optlist-perl (0.110-1) ... Setting up libhtml-parser-perl (3.72-5) ... Setting up gpgconf (2.2.20-1) ... Setting up gpg (2.2.20-1) ... Setting up libsub-exporter-perl (0.987-1) ... Setting up libiterator-perl (0.03+ds1-1) ... Setting up libiterator-util-perl (0.02+ds1-1) ... Setting up libparams-classify-perl (0.015-1+b2) ... Setting up libio-async-loop-epoll-perl (0.21-1) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.004000-1) ... Setting up libmoox-aliases-perl (0.001006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.91.0) ... Setting up sbuild-build-depends-lintian-dummy:ppc64el (0.invalid.0) ... Processing triggers for man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.31-3) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 24644 Build-Time: 52 Distribution: unstable Foreign Architectures: ppc64el Host Architecture: ppc64el Install-Time: 27 Job: samtools_1.10-4 Lintian: pass Machine Architecture: amd64 Package: samtools Package-Time: 88 Source-Version: 1.10-4 Space: 24644 Status: successful Version: 1.10-4 -------------------------------------------------------------------------------- Finished at 2020-08-27T02:11:13Z Build needed 00:01:28, 24644k disk space