sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | samtools 1.10-4 (s390x) Sat, 20 Jun 2020 09:07:38 +0000 | +==============================================================================+ Package: samtools Version: 1.10-4 Source Version: 1.10-4 Distribution: unstable Machine Architecture: amd64 Host Architecture: s390x Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-0ce29899-5b41-47cf-897a-d77b498f9191' with '<>' I: NOTICE: Log filtering will replace 'build/samtools-DIn5Tg/resolver-XlengT' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-06-20-0808.32.pdiff [3759 B] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-06-20-0808.32.pdiff [3759 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-06-20-0808.32.pdiff [3353 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-06-20-0808.32.pdiff [3353 B] Get:6 http://debian.oregonstate.edu/debian unstable/main s390x Packages [7919 kB] Fetched 8128 kB in 4s (2287 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'samtools' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/samtools.git Please use: git clone https://salsa.debian.org/med-team/samtools.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 4480 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main samtools 1.10-4 (dsc) [2248 B] Get:2 http://debian.oregonstate.edu/debian unstable/main samtools 1.10-4 (tar) [4458 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main samtools 1.10-4 (diff) [20.4 kB] Fetched 4480 kB in 0s (96.1 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/samtools-DIn5Tg/samtools-1.10' with '<>' I: NOTICE: Log filtering will replace 'build/samtools-DIn5Tg' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), bash-completion, libncurses5-dev, libhts-dev (>= 1.10), zlib1g-dev, automake, autoconf-archive, pkg-config, tabix (>= 1.0), liblzma-dev, libbz2-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x Filtered Build-Depends: debhelper-compat (= 13), bash-completion, libncurses5-dev, libhts-dev (>= 1.10), zlib1g-dev, automake, autoconf-archive, pkg-config, tabix (>= 1.0), liblzma-dev, libbz2-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [494 B] Get:5 copy:/<>/apt_archive ./ Packages [566 B] Fetched 2017 B in 0s (78.3 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf autoconf-archive automake autopoint autotools-dev bash-completion binutils-s390x-linux-gnu bsdmainutils build-essential cpp-9-s390x-linux-gnu cpp-s390x-linux-gnu cross-config crossbuild-essential-s390x debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-9 g++-9-s390x-linux-gnu g++-s390x-linux-gnu gcc-10-base:s390x gcc-10-cross-base gcc-9-base:s390x gcc-9-cross-base gcc-9-s390x-linux-gnu gcc-9-s390x-linux-gnu-base gcc-s390x-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:s390x libasan5-s390x-cross libatomic1:s390x libatomic1-s390x-cross libbrotli1:s390x libbsd0 libbz2-1.0:s390x libbz2-dev:s390x libc6:s390x libc6-dev libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libcom-err2:s390x libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:s390x libcrypt1:s390x libcurl3-gnutls:s390x libdb5.3:s390x libdebhelper-perl libdebian-dpkgcross-perl libdeflate0:s390x libdpkg-perl libelf1 libffi7:s390x libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:s390x libgcc-9-dev-s390x-cross libgcc-s1:s390x libgcc-s1-s390x-cross libgcrypt20:s390x libglib2.0-0 libgmp10:s390x libgnutls30:s390x libgomp1:s390x libgomp1-s390x-cross libgpg-error0:s390x libgssapi-krb5-2:s390x libhogweed5:s390x libhts-dev:s390x libhts3:s390x libicu67 libidn2-0:s390x libio-string-perl libitm1:s390x libitm1-s390x-cross libk5crypto3:s390x libkeyutils1:s390x libkrb5-3:s390x libkrb5support0:s390x libldap-2.4-2:s390x libldap-common liblocale-gettext-perl liblzma-dev:s390x liblzma5:s390x libmagic-mgc libmagic1 libncurses-dev:s390x libncurses5-dev:s390x libncurses6:s390x libncursesw6:s390x libnettle7:s390x libnghttp2-14:s390x libp11-kit0:s390x libperl5.30 libpipeline1 libpsl5:s390x librtmp1:s390x libsasl2-2:s390x libsasl2-modules-db:s390x libsigsegv2 libssh2-1:s390x libssl1.1:s390x libstdc++-9-dev libstdc++-9-dev:s390x libstdc++-9-dev-s390x-cross libstdc++6:s390x libstdc++6-s390x-cross libsub-override-perl libtasn1-6:s390x libtinfo6:s390x libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libunistring2:s390x libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:s390x linux-libc-dev-s390x-cross m4 man-db perl perl-modules-5.30 pkg-config po-debconf sensible-utils tabix:s390x ucf zlib1g:s390x zlib1g-dev:s390x Suggested packages: gnu-standards autoconf-doc binutils-doc calendar wamerican | wordlist whois vacation gcc-9-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-9-multilib gcc-9-doc g++-9-multilib-s390x-linux-gnu gcc-9-multilib-s390x-linux-gnu manpages-dev flex bison gdb-s390x-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:s390x libc-l10n:s390x locales:s390x glibc-doc manpages-dev:s390x gnupg | gnupg2 git bzr rng-tools:s390x gnutls-bin:s390x krb5-doc:s390x krb5-user:s390x liblzma-doc:s390x ncurses-doc:s390x libstdc++-9-doc libstdc++-9-doc:s390x libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: bsdextrautils gnupg | gnupg2 libalgorithm-merge-perl curl | wget | lynx bzip2-doc:s390x ca-certificates:s390x libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpg-error-l10n:s390x krb5-locales:s390x libgpm2:s390x publicsuffix:s390x libsasl2-modules:s390x libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf autoconf-archive automake autopoint autotools-dev bash-completion binutils-s390x-linux-gnu bsdmainutils build-essential cpp-9-s390x-linux-gnu cpp-s390x-linux-gnu cross-config crossbuild-essential-s390x debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-9 g++-9-s390x-linux-gnu g++-s390x-linux-gnu gcc-10-base:s390x gcc-10-cross-base gcc-9-base:s390x gcc-9-cross-base gcc-9-s390x-linux-gnu gcc-9-s390x-linux-gnu-base gcc-s390x-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:s390x libasan5-s390x-cross libatomic1:s390x libatomic1-s390x-cross libbrotli1:s390x libbsd0 libbz2-1.0:s390x libbz2-dev:s390x libc6:s390x libc6-dev libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libcom-err2:s390x libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:s390x libcrypt1:s390x libcurl3-gnutls:s390x libdb5.3:s390x libdebhelper-perl libdebian-dpkgcross-perl libdeflate0:s390x libdpkg-perl libelf1 libffi7:s390x libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:s390x libgcc-9-dev-s390x-cross libgcc-s1:s390x libgcc-s1-s390x-cross libgcrypt20:s390x libglib2.0-0 libgmp10:s390x libgnutls30:s390x libgomp1:s390x libgomp1-s390x-cross libgpg-error0:s390x libgssapi-krb5-2:s390x libhogweed5:s390x libhts-dev:s390x libhts3:s390x libicu67 libidn2-0:s390x libio-string-perl libitm1:s390x libitm1-s390x-cross libk5crypto3:s390x libkeyutils1:s390x libkrb5-3:s390x libkrb5support0:s390x libldap-2.4-2:s390x libldap-common liblocale-gettext-perl liblzma-dev:s390x liblzma5:s390x libmagic-mgc libmagic1 libncurses-dev:s390x libncurses5-dev:s390x libncurses6:s390x libncursesw6:s390x libnettle7:s390x libnghttp2-14:s390x libp11-kit0:s390x libperl5.30 libpipeline1 libpsl5:s390x librtmp1:s390x libsasl2-2:s390x libsasl2-modules-db:s390x libsigsegv2 libssh2-1:s390x libssl1.1:s390x libstdc++-9-dev libstdc++-9-dev:s390x libstdc++-9-dev-s390x-cross libstdc++6:s390x libstdc++6-s390x-cross libsub-override-perl libtasn1-6:s390x libtinfo6:s390x libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libunistring2:s390x libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:s390x linux-libc-dev-s390x-cross m4 man-db perl perl-modules-5.30 pkg-config po-debconf sbuild-build-depends-main-dummy:s390x sensible-utils tabix:s390x ucf zlib1g:s390x zlib1g-dev:s390x 0 upgraded, 148 newly installed, 0 to remove and 0 not upgraded. Need to get 101 MB of archives. After this operation, 405 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [996 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 12.1.1 [52.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-5 [920 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.2-2 [33.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.2-1 [1315 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.30 all 5.30.3-4 [2806 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.30 amd64 5.30.3-4 [4019 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.30.3-4 [290 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf-archive all 20190106-2.1 [746 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main s390x gcc-10-base s390x 10.1.0-4 [197 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main s390x gcc-9-base s390x 9.3.0-14 [197 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 bash-completion all 1:2.10-1 [228 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-5 [262 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-5 [120 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-5 [67.9 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.2-1 [775 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-s390x-linux-gnu amd64 2.34-8 [1946 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.16-1 [104 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.30-8 [2631 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev amd64 9.3.0-14 [1701 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9 amd64 9.3.0-14 [10.7 MB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:9.2.1-3.1 [1644 B] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.19.7 [1414 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.19.7 [1773 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-s390x-linux-gnu-base amd64 9.3.0-13cross1 [197 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-s390x-linux-gnu amd64 9.3.0-13cross1 [6145 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-s390x-linux-gnu amd64 4:9.2.1-3.1 [16.7 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base all 9.3.0-13cross1 [193 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10.1.0-3cross1 [194 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-s390x-cross all 2.30-2cross1 [1246 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-s390x-cross all 10.1.0-3cross1 [24.7 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-s390x-cross all 10.1.0-3cross1 [90.0 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-s390x-cross all 10.1.0-3cross1 [24.9 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-s390x-cross all 10.1.0-3cross1 [7940 B] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-s390x-cross all 9.3.0-13cross1 [338 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-s390x-cross all 10.1.0-3cross1 [440 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-s390x-cross all 10.1.0-3cross1 [125 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-s390x-cross all 9.3.0-13cross1 [681 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-s390x-linux-gnu amd64 9.3.0-13cross1 [6529 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-s390x-linux-gnu amd64 4:9.2.1-3.1 [1456 B] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-s390x-cross all 5.4.19-1cross1 [1173 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-s390x-cross all 2.30-2cross1 [2207 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-s390x-cross all 9.3.0-13cross1 [1652 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-s390x-linux-gnu amd64 9.3.0-13cross1 [6729 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 g++-s390x-linux-gnu amd64 4:9.2.1-3.1 [1176 B] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-2 [8610 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-5+b1 [710 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-s390x all 12.8 [6636 B] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.1 [187 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.8.1-1 [25.2 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.8.1-1 [14.9 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.64.3-1 [1341 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.1 [1012 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main s390x libgcc-s1 s390x 10.1.0-4 [24.6 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main s390x libcrypt1 s390x 1:4.4.16-1 [89.0 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main s390x libc6 s390x 2.30-8 [2465 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main s390x libasan5 s390x 9.3.0-14 [344 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main s390x libatomic1 s390x 10.1.0-4 [8104 B] Get:95 http://debian.oregonstate.edu/debian unstable/main s390x libbrotli1 s390x 1.0.7-6.1 [259 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main s390x libbz2-1.0 s390x 1.0.8-3 [45.8 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main s390x linux-libc-dev s390x 5.6.14-2 [1113 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main s390x libcrypt-dev s390x 1:4.4.16-1 [107 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main s390x libc6-dev s390x 2.30-8 [2237 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main s390x libbz2-dev s390x 1.0.8-3 [30.2 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main s390x libcom-err2 s390x 1.45.6-1 [71.6 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main s390x libgmp10 s390x 2:6.2.0+dfsg-6 [238 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main s390x libnettle7 s390x 3.5.1+really3.5.1-2 [233 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main s390x libhogweed5 s390x 3.5.1+really3.5.1-2 [136 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main s390x libunistring2 s390x 0.9.10-4 [366 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main s390x libidn2-0 s390x 2.3.0-1 [84.5 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main s390x libffi7 s390x 3.3-4 [19.9 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main s390x libp11-kit0 s390x 0.23.20-1 [320 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main s390x libtasn1-6 s390x 4.16.0-2 [52.5 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main s390x libgnutls30 s390x 3.6.14-2 [1133 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main s390x libkrb5support0 s390x 1.17-10 [63.8 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main s390x libk5crypto3 s390x 1.17-10 [113 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main s390x libkeyutils1 s390x 1.6.1-2 [15.2 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main s390x libssl1.1 s390x 1.1.1g-1 [1202 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main s390x libkrb5-3 s390x 1.17-10 [343 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main s390x libgssapi-krb5-2 s390x 1.17-10 [145 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main s390x libdb5.3 s390x 5.3.28+dfsg1-0.6 [612 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main s390x libsasl2-modules-db s390x 2.1.27+dfsg-2 [68.1 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main s390x libsasl2-2 s390x 2.1.27+dfsg-2 [103 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-common all 2.4.50+dfsg-1 [92.9 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main s390x libldap-2.4-2 s390x 2.4.50+dfsg-1 [216 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main s390x libnghttp2-14 s390x 1.41.0-2 [67.7 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main s390x libpsl5 s390x 0.21.0-1.1 [55.0 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main s390x zlib1g s390x 1:1.2.11.dfsg-2 [88.9 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main s390x librtmp1 s390x 2.4+20151223.gitfa8646d.1-2+b1 [56.5 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main s390x libgpg-error0 s390x 1.38-1 [72.9 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main s390x libgcrypt20 s390x 1.8.5-5 [487 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main s390x libssh2-1 s390x 1.8.0-2.1 [132 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main s390x libcurl3-gnutls s390x 7.68.0-1 [298 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main s390x libdeflate0 s390x 1.6-1 [51.8 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main s390x libgomp1 s390x 10.1.0-4 [92.0 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main s390x libitm1 s390x 10.1.0-4 [25.3 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main s390x libstdc++6 s390x 10.1.0-4 [483 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main s390x libubsan1 s390x 10.1.0-4 [125 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main s390x libgcc-9-dev s390x 9.3.0-14 [681 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main s390x liblzma5 s390x 5.2.4-1+b1 [151 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main s390x libhts3 s390x 1.10.2-3 [340 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main s390x liblzma-dev s390x 5.2.4-1+b1 [210 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main s390x zlib1g-dev s390x 1:1.2.11.dfsg-2 [189 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main s390x libhts-dev s390x 1.10.2-3 [4859 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main s390x libtinfo6 s390x 6.2-1 [330 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main s390x libncurses6 s390x 6.2-1 [94.2 kB] Get:143 http://debian.oregonstate.edu/debian unstable/main s390x libncursesw6 s390x 6.2-1 [120 kB] Get:144 http://debian.oregonstate.edu/debian unstable/main s390x libncurses-dev s390x 6.2-1 [315 kB] Get:145 http://debian.oregonstate.edu/debian unstable/main s390x libncurses5-dev s390x 6.2-1 [932 B] Get:146 http://debian.oregonstate.edu/debian unstable/main s390x libstdc++-9-dev s390x 9.3.0-14 [1664 kB] Get:147 http://debian.oregonstate.edu/debian unstable/main amd64 pkg-config amd64 0.29.2-1 [65.1 kB] Get:148 http://debian.oregonstate.edu/debian unstable/main s390x tabix s390x 1.10.2-3 [345 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 101 MB in 1s (112 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 10321 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../001-bsdmainutils_12.1.1_amd64.deb ... Unpacking bsdmainutils (12.1.1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../002-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../003-groff-base_1.22.4-5_amd64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../004-libpipeline1_1.5.2-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.2-2) ... Selecting previously unselected package man-db. Preparing to unpack .../005-man-db_2.9.2-1_amd64.deb ... Unpacking man-db (2.9.2-1) ... Selecting previously unselected package perl-modules-5.30. Preparing to unpack .../006-perl-modules-5.30_5.30.3-4_all.deb ... Unpacking perl-modules-5.30 (5.30.3-4) ... Selecting previously unselected package libperl5.30:amd64. Preparing to unpack .../007-libperl5.30_5.30.3-4_amd64.deb ... Unpacking libperl5.30:amd64 (5.30.3-4) ... Selecting previously unselected package perl. Preparing to unpack .../008-perl_5.30.3-4_amd64.deb ... Unpacking perl (5.30.3-4) ... Selecting previously unselected package autoconf-archive. Preparing to unpack .../009-autoconf-archive_20190106-2.1_all.deb ... Unpacking autoconf-archive (20190106-2.1) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../010-liblocale-gettext-perl_1.07-4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4) ... Selecting previously unselected package gcc-10-base:s390x. Preparing to unpack .../011-gcc-10-base_10.1.0-4_s390x.deb ... Unpacking gcc-10-base:s390x (10.1.0-4) ... Selecting previously unselected package gcc-9-base:s390x. Preparing to unpack .../012-gcc-9-base_9.3.0-14_s390x.deb ... Unpacking gcc-9-base:s390x (9.3.0-14) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../013-sensible-utils_0.0.12+nmu1_all.deb ... Unpacking sensible-utils (0.0.12+nmu1) ... Selecting previously unselected package bash-completion. Preparing to unpack .../014-bash-completion_1%3a2.10-1_all.deb ... Unpacking bash-completion (1:2.10-1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../015-libmagic-mgc_1%3a5.38-5_amd64.deb ... Unpacking libmagic-mgc (1:5.38-5) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../016-libmagic1_1%3a5.38-5_amd64.deb ... Unpacking libmagic1:amd64 (1:5.38-5) ... Selecting previously unselected package file. Preparing to unpack .../017-file_1%3a5.38-5_amd64.deb ... Unpacking file (1:5.38-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../018-gettext-base_0.19.8.1-10_amd64.deb ... Unpacking gettext-base (0.19.8.1-10) ... Selecting previously unselected package ucf. Preparing to unpack .../019-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../020-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../021-m4_1.4.18-4_amd64.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../022-autoconf_2.69-11.1_all.deb ... Unpacking autoconf (2.69-11.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../023-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../024-automake_1%3a1.16.2-1_all.deb ... Unpacking automake (1:1.16.2-1) ... Selecting previously unselected package autopoint. Preparing to unpack .../025-autopoint_0.19.8.1-10_all.deb ... Unpacking autopoint (0.19.8.1-10) ... Selecting previously unselected package binutils-s390x-linux-gnu. Preparing to unpack .../026-binutils-s390x-linux-gnu_2.34-8_amd64.deb ... Unpacking binutils-s390x-linux-gnu (2.34-8) ... Selecting previously unselected package libcrypt-dev:amd64. Preparing to unpack .../027-libcrypt-dev_1%3a4.4.16-1_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.16-1) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../028-libc6-dev_2.30-8_amd64.deb ... Unpacking libc6-dev:amd64 (2.30-8) ... Selecting previously unselected package libstdc++-9-dev:amd64. Preparing to unpack .../029-libstdc++-9-dev_9.3.0-14_amd64.deb ... Unpacking libstdc++-9-dev:amd64 (9.3.0-14) ... Selecting previously unselected package g++-9. Preparing to unpack .../030-g++-9_9.3.0-14_amd64.deb ... Unpacking g++-9 (9.3.0-14) ... Selecting previously unselected package g++. Preparing to unpack .../031-g++_4%3a9.2.1-3.1_amd64.deb ... Unpacking g++ (4:9.2.1-3.1) ... Selecting previously unselected package libdpkg-perl. Preparing to unpack .../032-libdpkg-perl_1.19.7_all.deb ... Unpacking libdpkg-perl (1.19.7) ... Selecting previously unselected package dpkg-dev. Preparing to unpack .../033-dpkg-dev_1.19.7_all.deb ... Unpacking dpkg-dev (1.19.7) ... Selecting previously unselected package build-essential. Preparing to unpack .../034-build-essential_12.8_amd64.deb ... Unpacking build-essential (12.8) ... Selecting previously unselected package gcc-9-s390x-linux-gnu-base:amd64. Preparing to unpack .../035-gcc-9-s390x-linux-gnu-base_9.3.0-13cross1_amd64.deb ... Unpacking gcc-9-s390x-linux-gnu-base:amd64 (9.3.0-13cross1) ... Selecting previously unselected package cpp-9-s390x-linux-gnu. Preparing to unpack .../036-cpp-9-s390x-linux-gnu_9.3.0-13cross1_amd64.deb ... Unpacking cpp-9-s390x-linux-gnu (9.3.0-13cross1) ... Selecting previously unselected package cpp-s390x-linux-gnu. Preparing to unpack .../037-cpp-s390x-linux-gnu_4%3a9.2.1-3.1_amd64.deb ... Unpacking cpp-s390x-linux-gnu (4:9.2.1-3.1) ... Selecting previously unselected package cross-config. Preparing to unpack .../038-cross-config_2.6.15-3_all.deb ... Unpacking cross-config (2.6.15-3) ... Selecting previously unselected package gcc-9-cross-base. Preparing to unpack .../039-gcc-9-cross-base_9.3.0-13cross1_all.deb ... Unpacking gcc-9-cross-base (9.3.0-13cross1) ... Selecting previously unselected package gcc-10-cross-base. Preparing to unpack .../040-gcc-10-cross-base_10.1.0-3cross1_all.deb ... Unpacking gcc-10-cross-base (10.1.0-3cross1) ... Selecting previously unselected package libc6-s390x-cross. Preparing to unpack .../041-libc6-s390x-cross_2.30-2cross1_all.deb ... Unpacking libc6-s390x-cross (2.30-2cross1) ... Selecting previously unselected package libgcc-s1-s390x-cross. Preparing to unpack .../042-libgcc-s1-s390x-cross_10.1.0-3cross1_all.deb ... Unpacking libgcc-s1-s390x-cross (10.1.0-3cross1) ... Selecting previously unselected package libgomp1-s390x-cross. Preparing to unpack .../043-libgomp1-s390x-cross_10.1.0-3cross1_all.deb ... Unpacking libgomp1-s390x-cross (10.1.0-3cross1) ... Selecting previously unselected package libitm1-s390x-cross. Preparing to unpack .../044-libitm1-s390x-cross_10.1.0-3cross1_all.deb ... Unpacking libitm1-s390x-cross (10.1.0-3cross1) ... Selecting previously unselected package libatomic1-s390x-cross. Preparing to unpack .../045-libatomic1-s390x-cross_10.1.0-3cross1_all.deb ... Unpacking libatomic1-s390x-cross (10.1.0-3cross1) ... Selecting previously unselected package libasan5-s390x-cross. Preparing to unpack .../046-libasan5-s390x-cross_9.3.0-13cross1_all.deb ... Unpacking libasan5-s390x-cross (9.3.0-13cross1) ... Selecting previously unselected package libstdc++6-s390x-cross. Preparing to unpack .../047-libstdc++6-s390x-cross_10.1.0-3cross1_all.deb ... Unpacking libstdc++6-s390x-cross (10.1.0-3cross1) ... Selecting previously unselected package libubsan1-s390x-cross. Preparing to unpack .../048-libubsan1-s390x-cross_10.1.0-3cross1_all.deb ... Unpacking libubsan1-s390x-cross (10.1.0-3cross1) ... Selecting previously unselected package libgcc-9-dev-s390x-cross. Preparing to unpack .../049-libgcc-9-dev-s390x-cross_9.3.0-13cross1_all.deb ... Unpacking libgcc-9-dev-s390x-cross (9.3.0-13cross1) ... Selecting previously unselected package gcc-9-s390x-linux-gnu. Preparing to unpack .../050-gcc-9-s390x-linux-gnu_9.3.0-13cross1_amd64.deb ... Unpacking gcc-9-s390x-linux-gnu (9.3.0-13cross1) ... Selecting previously unselected package gcc-s390x-linux-gnu. Preparing to unpack .../051-gcc-s390x-linux-gnu_4%3a9.2.1-3.1_amd64.deb ... Unpacking gcc-s390x-linux-gnu (4:9.2.1-3.1) ... Selecting previously unselected package linux-libc-dev-s390x-cross. Preparing to unpack .../052-linux-libc-dev-s390x-cross_5.4.19-1cross1_all.deb ... Unpacking linux-libc-dev-s390x-cross (5.4.19-1cross1) ... Selecting previously unselected package libc6-dev-s390x-cross. Preparing to unpack .../053-libc6-dev-s390x-cross_2.30-2cross1_all.deb ... Unpacking libc6-dev-s390x-cross (2.30-2cross1) ... Selecting previously unselected package libstdc++-9-dev-s390x-cross. Preparing to unpack .../054-libstdc++-9-dev-s390x-cross_9.3.0-13cross1_all.deb ... Unpacking libstdc++-9-dev-s390x-cross (9.3.0-13cross1) ... Selecting previously unselected package g++-9-s390x-linux-gnu. Preparing to unpack .../055-g++-9-s390x-linux-gnu_9.3.0-13cross1_amd64.deb ... Unpacking g++-9-s390x-linux-gnu (9.3.0-13cross1) ... Selecting previously unselected package g++-s390x-linux-gnu. Preparing to unpack .../056-g++-s390x-linux-gnu_4%3a9.2.1-3.1_amd64.deb ... Unpacking g++-s390x-linux-gnu (4:9.2.1-3.1) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../057-libconfig-inifiles-perl_3.000003-1_all.deb ... Unpacking libconfig-inifiles-perl (3.000003-1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../058-libio-string-perl_1.08-3_all.deb ... Unpacking libio-string-perl (1.08-3) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../059-libicu67_67.1-2_amd64.deb ... Unpacking libicu67:amd64 (67.1-2) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../060-libxml2_2.9.10+dfsg-5+b1_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-5+b1) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../061-libxml-namespacesupport-perl_1.12-1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../062-libxml-sax-base-perl_1.09-1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../063-libxml-sax-perl_1.02+dfsg-1_all.deb ... Unpacking libxml-sax-perl (1.02+dfsg-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../064-libxml-libxml-perl_2.0134+dfsg-2_amd64.deb ... Unpacking libxml-libxml-perl (2.0134+dfsg-2) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../065-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../066-libyaml-perl_1.30-1_all.deb ... Unpacking libyaml-perl (1.30-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../067-libconfig-auto-perl_0.44-1_all.deb ... Unpacking libconfig-auto-perl (0.44-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../068-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../069-libfile-homedir-perl_1.004-1_all.deb ... Unpacking libfile-homedir-perl (1.004-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../070-libdebian-dpkgcross-perl_2.6.15-3_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-3) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../071-dpkg-cross_2.6.15-3_all.deb ... Unpacking dpkg-cross (2.6.15-3) ... Selecting previously unselected package crossbuild-essential-s390x. Preparing to unpack .../072-crossbuild-essential-s390x_12.8_all.deb ... Unpacking crossbuild-essential-s390x (12.8) ... Selecting previously unselected package libtool. Preparing to unpack .../073-libtool_2.4.6-14_all.deb ... Unpacking libtool (2.4.6-14) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../074-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../075-libdebhelper-perl_13.1_all.deb ... Unpacking libdebhelper-perl (13.1) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../076-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../077-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../078-libfile-stripnondeterminism-perl_1.8.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.8.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../079-dh-strip-nondeterminism_1.8.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.8.1-1) ... Selecting previously unselected package libelf1:amd64. 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Unpacking pkg-config (0.29.2-1) ... Selecting previously unselected package tabix:s390x. Preparing to unpack .../146-tabix_1.10.2-3_s390x.deb ... Unpacking tabix:s390x (1.10.2-3) ... Selecting previously unselected package sbuild-build-depends-main-dummy:s390x. Preparing to unpack .../147-sbuild-build-depends-main-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-main-dummy:s390x (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libpipeline1:amd64 (1.5.2-2) ... Setting up binutils-s390x-linux-gnu (2.34-8) ... Setting up perl-modules-5.30 (5.30.3-4) ... Setting up libicu67:amd64 (67.1-2) ... Setting up libmagic-mgc (1:5.38-5) ... Setting up libglib2.0-0:amd64 (2.64.3-1) ... No schema files found: doing nothing. Setting up libc6-s390x-cross (2.30-2cross1) ... Setting up gcc-9-s390x-linux-gnu-base:amd64 (9.3.0-13cross1) ... Setting up libmagic1:amd64 (1:5.38-5) ... Setting up linux-libc-dev:s390x (5.6.14-2) ... Setting up gettext-base (0.19.8.1-10) ... Setting up autoconf-archive (20190106-2.1) ... Setting up file (1:5.38-5) ... Setting up libldap-common (2.4.50+dfsg-1) ... Setting up gcc-10-base:s390x (10.1.0-4) ... Setting up autotools-dev (20180224.1) ... Setting up linux-libc-dev-s390x-cross (5.4.19-1cross1) ... Setting up cross-config (2.6.15-3) ... Setting up cpp-9-s390x-linux-gnu (9.3.0-13cross1) ... Setting up bash-completion (1:2.10-1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up autopoint (0.19.8.1-10) ... Setting up gcc-9-cross-base (9.3.0-13cross1) ... Setting up gcc-10-cross-base (10.1.0-3cross1) ... Setting up libitm1-s390x-cross (10.1.0-3cross1) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libc6-dev-s390x-cross (2.30-2cross1) ... Setting up libcrypt-dev:amd64 (1:4.4.16-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libperl5.30:amd64 (5.30.3-4) ... Setting up libc6-dev:amd64 (2.30-8) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libgomp1-s390x-cross (10.1.0-3cross1) ... Setting up libxml2:amd64 (2.9.10+dfsg-5+b1) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up gcc-9-base:s390x (9.3.0-14) ... Setting up libstdc++-9-dev:amd64 (9.3.0-14) ... Setting up cpp-s390x-linux-gnu (4:9.2.1-3.1) ... Setting up libtool (2.4.6-14) ... Setting up libatomic1-s390x-cross (10.1.0-3cross1) ... Setting up m4 (1.4.18-4) ... Setting up perl (5.30.3-4) ... Setting up bsdmainutils (12.1.1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:amd64 (0.6.13-1) ... Setting up libgcc-s1-s390x-cross (10.1.0-3cross1) ... Setting up ucf (3.0043) ... Setting up g++-9 (9.3.0-14) ... Setting up libdpkg-perl (1.19.7) ... Setting up autoconf (2.69-11.1) ... Setting up g++ (4:9.2.1-3.1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up libsub-override-perl (0.09-2) ... Setting up automake (1:1.16.2-1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up gettext (0.19.8.1-10) ... Setting up libstdc++6-s390x-cross (10.1.0-3cross1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up libasan5-s390x-cross (9.3.0-13cross1) ... Setting up man-db (2.9.2-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.19.7) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up pkg-config (0.29.2-1) ... Setting up build-essential (12.8) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libfile-stripnondeterminism-perl (1.8.1-1) ... Setting up libubsan1-s390x-cross (10.1.0-3cross1) ... Setting up po-debconf (1.0.21) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.8.1-1) ... Setting up libgcc-9-dev-s390x-cross (9.3.0-13cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libstdc++-9-dev-s390x-cross (9.3.0-13cross1) ... Setting up gcc-9-s390x-linux-gnu (9.3.0-13cross1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up gcc-s390x-linux-gnu (4:9.2.1-3.1) ... Setting up g++-9-s390x-linux-gnu (9.3.0-13cross1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up g++-s390x-linux-gnu (4:9.2.1-3.1) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-s390x (12.8) ... Setting up libcrypt1:s390x (1:4.4.16-1) ... Setting up libgcc-s1:s390x (10.1.0-4) ... Setting up dh-autoreconf (19) ... Setting up libc6:s390x (2.30-8) ... Setting up libnettle7:s390x (3.5.1+really3.5.1-2) ... Setting up libcrypt-dev:s390x (1:4.4.16-1) ... Setting up libtasn1-6:s390x (4.16.0-2) ... Setting up libc6-dev:s390x (2.30-8) ... Setting up libbz2-1.0:s390x (1.0.8-3) ... Setting up libdb5.3:s390x (5.3.28+dfsg1-0.6) ... Setting up libstdc++6:s390x (10.1.0-4) ... Setting up libitm1:s390x (10.1.0-4) ... Setting up libtinfo6:s390x (6.2-1) ... Setting up libbz2-dev:s390x (1.0.8-3) ... Setting up libkeyutils1:s390x (1.6.1-2) ... Setting up liblzma5:s390x (5.2.4-1+b1) ... Setting up libgpg-error0:s390x (1.38-1) ... Setting up libssl1.1:s390x (1.1.1g-1) ... Setting up libbrotli1:s390x (1.0.7-6.1) ... Setting up libffi7:s390x (3.3-4) ... Setting up libnghttp2-14:s390x (1.41.0-2) ... Setting up libunistring2:s390x (0.9.10-4) ... Setting up libdeflate0:s390x (1.6-1) ... Setting up libgcrypt20:s390x (1.8.5-5) ... Setting up debhelper (13.1) ... Setting up zlib1g:s390x (1:1.2.11.dfsg-2) ... Setting up libidn2-0:s390x (2.3.0-1) ... Setting up libcom-err2:s390x (1.45.6-1) ... Setting up libgomp1:s390x (10.1.0-4) ... Setting up libkrb5support0:s390x (1.17-10) ... Setting up libsasl2-modules-db:s390x (2.1.27+dfsg-2) ... Setting up libasan5:s390x (9.3.0-14) ... Setting up libgmp10:s390x (2:6.2.0+dfsg-6) ... Setting up libncurses6:s390x (6.2-1) ... Setting up libp11-kit0:s390x (0.23.20-1) ... Setting up libatomic1:s390x (10.1.0-4) ... Setting up libncursesw6:s390x (6.2-1) ... Setting up libk5crypto3:s390x (1.17-10) ... Setting up libsasl2-2:s390x (2.1.27+dfsg-2) ... Setting up liblzma-dev:s390x (5.2.4-1+b1) ... Setting up libubsan1:s390x (10.1.0-4) ... Setting up zlib1g-dev:s390x (1:1.2.11.dfsg-2) ... Setting up libssh2-1:s390x (1.8.0-2.1) ... Setting up libkrb5-3:s390x (1.17-10) ... Setting up libncurses-dev:s390x (6.2-1) ... Setting up libpsl5:s390x (0.21.0-1.1) ... Setting up libhogweed5:s390x (3.5.1+really3.5.1-2) ... Setting up libgcc-9-dev:s390x (9.3.0-14) ... Setting up libgnutls30:s390x (3.6.14-2) ... Setting up librtmp1:s390x (2.4+20151223.gitfa8646d.1-2+b1) ... Setting up libgssapi-krb5-2:s390x (1.17-10) ... Setting up libncurses5-dev:s390x (6.2-1) ... Setting up libstdc++-9-dev:s390x (9.3.0-14) ... Setting up libldap-2.4-2:s390x (2.4.50+dfsg-1) ... Setting up libcurl3-gnutls:s390x (7.68.0-1) ... Setting up tabix:s390x (1.10.2-3) ... Setting up libhts3:s390x (1.10.2-3) ... Setting up libhts-dev:s390x (1.10.2-3) ... Setting up sbuild-build-depends-main-dummy:s390x (0.invalid.0) ... Processing triggers for libc-bin (2.30-8) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (s390x included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-9-amd64 #1 SMP Debian 4.19.118-2 (2020-04-29) amd64 (x86_64) Toolchain package versions: binutils_2.34-8 dpkg-dev_1.19.7 g++-9_9.3.0-14 gcc-9_9.3.0-14 libc6-dev_2.30-8 libstdc++-9-dev_9.3.0-14 libstdc++-9-dev-s390x-cross_9.3.0-13cross1 libstdc++6_10.1.0-4 libstdc++6-s390x-cross_10.1.0-3cross1 linux-libc-dev_5.6.14-2 Package versions: adduser_3.118 apt_2.1.6 autoconf_2.69-11.1 autoconf-archive_20190106-2.1 automake_1:1.16.2-1 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-6 bash-completion_1:2.10-1 binutils_2.34-8 binutils-common_2.34-8 binutils-s390x-linux-gnu_2.34-8 binutils-x86-64-linux-gnu_2.34-8 bsdmainutils_12.1.1 bsdutils_1:2.35.2-3 build-essential_12.8 bzip2_1.0.8-3 coreutils_8.30-3+b1 cpp_4:9.2.1-3.1 cpp-8_8.4.0-4 cpp-9_9.3.0-14 cpp-9-s390x-linux-gnu_9.3.0-13cross1 cpp-s390x-linux-gnu_4:9.2.1-3.1 cross-config_2.6.15-3 crossbuild-essential-s390x_12.8 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.1 debian-archive-keyring_2019.1 debianutils_4.11 dh-autoreconf_19 dh-strip-nondeterminism_1.8.1-1 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.35.2-3 file_1:5.38-5 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-9_9.3.0-14 g++-9-s390x-linux-gnu_9.3.0-13cross1 g++-s390x-linux-gnu_4:9.2.1-3.1 gcc_4:9.2.1-3.1 gcc-10-base_10.1.0-4 gcc-10-cross-base_10.1.0-3cross1 gcc-8-base_8.4.0-4 gcc-9_9.3.0-14 gcc-9-base_9.3.0-14 gcc-9-cross-base_9.3.0-13cross1 gcc-9-s390x-linux-gnu_9.3.0-13cross1 gcc-9-s390x-linux-gnu-base_9.3.0-13cross1 gcc-s390x-linux-gnu_4:9.2.1-3.1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.1.6 libarchive-zip-perl_1.68-1 libasan5_9.3.0-14 libasan5-s390x-cross_9.3.0-13cross1 libatomic1_10.1.0-4 libatomic1-s390x-cross_10.1.0-3cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3+b1 libbinutils_2.34-8 libblkid1_2.35.2-3 libbrotli1_1.0.7-6.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-3 libbz2-dev_1.0.8-3 libc-bin_2.30-8 libc-dev-bin_2.30-8 libc6_2.30-8 libc6-dev_2.30-8 libc6-dev-s390x-cross_2.30-2cross1 libc6-s390x-cross_2.30-2cross1 libcap-ng0_0.7.9-2.2 libcc1-0_10.1.0-4 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000003-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libctf-nobfd0_2.34-8 libctf0_2.34-8 libcurl3-gnutls_7.68.0-1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.252 libdebhelper-perl_13.1 libdebian-dpkgcross-perl_2.6.15-3 libdeflate0_1.6-1 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.35.2-3 libffi6_3.2.1-9 libffi7_3.3-4 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.8.1-1 libfile-which-perl_1.23-1 libgcc-9-dev_9.3.0-14 libgcc-9-dev-s390x-cross_9.3.0-13cross1 libgcc-s1_10.1.0-4 libgcc-s1-s390x-cross_10.1.0-3cross1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.3-1 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.14-2 libgomp1_10.1.0-4 libgomp1-s390x-cross_10.1.0-3cross1 libgpg-error0_1.38-1 libgssapi-krb5-2_1.17-10 libhogweed4_3.5.1+really3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libhts-dev_1.10.2-3 libhts3_1.10.2-3 libicu67_67.1-2 libidn2-0_2.3.0-1 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 libitm1_10.1.0-4 libitm1-s390x-cross_10.1.0-3cross1 libk5crypto3_1.17-10 libkeyutils1_1.6.1-2 libkrb5-3_1.17-10 libkrb5support0_1.17-10 libldap-2.4-2_2.4.50+dfsg-1 libldap-common_2.4.50+dfsg-1 liblocale-gettext-perl_1.07-4 liblsan0_10.1.0-4 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1+b1 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.35.2-3 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.4.0-4 libncurses-dev_6.2-1 libncurses5-dev_6.2-1 libncurses6_6.2-1 libncursesw6_6.2-1 libnettle6_3.5.1+really3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.41.0-2 libp11-kit0_0.23.20-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.28_5.28.1-6 libperl5.30_5.30.3-4 libpipeline1_1.5.2-2 libpsl5_0.21.0-1.1 libquadmath0_10.1.0-4 librtmp1_2.4+20151223.gitfa8646d.1-2+b1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1+b1 libselinux1_3.0-1+b3 libsemanage-common_3.0-1 libsemanage1_3.0-1+b3 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.35.2-3 libss2_1.45.6-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1g-1 libstdc++-9-dev_9.3.0-14 libstdc++-9-dev-s390x-cross_9.3.0-13cross1 libstdc++6_10.1.0-4 libstdc++6-s390x-cross_10.1.0-3cross1 libsub-override-perl_0.09-2 libsystemd0_245.6-1 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libtsan0_10.1.0-4 libubsan1_10.1.0-4 libubsan1-s390x-cross_10.1.0-3cross1 libuchardet0_0.0.7-1 libudev1_245.6-1 libunistring2_0.9.10-4 libuuid1_2.35.2-3 libxml-libxml-perl_2.0134+dfsg-2 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-5+b1 libyaml-perl_1.30-1 libzstd1_1.4.5+dfsg-2 linux-libc-dev_5.6.14-2 linux-libc-dev-s390x-cross_5.4.19-1cross1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.3-3 man-db_2.9.2-1 mawk_1.3.4.20200120-2 mount_2.35.2-3 ncurses-base_6.2-1 ncurses-bin_6.2-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.3-4 pkg-config_0.29.2-1 po-debconf_1.0.21 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 tabix_1.10.2-3 tar_1.30+dfsg-7 tzdata_2020a-1 ucf_3.0043 util-linux_2.35.2-3 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: samtools Binary: samtools, samtools-test Architecture: any all Version: 1.10-4 Maintainer: Debian Med Packaging Team Uploaders: Charles Plessy , Andreas Tille Homepage: http://www.htslib.org/ Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/samtools Vcs-Git: https://salsa.debian.org/med-team/samtools.git Testsuite: autopkgtest Testsuite-Triggers: tabix Build-Depends: debhelper-compat (= 13), bash-completion, libio-pty-perl , libncurses5-dev, libhts-dev (>= 1.10), zlib1g-dev, automake, autoconf-archive, pkg-config, tabix (>= 1.0), liblzma-dev, libbz2-dev Package-List: samtools deb science optional arch=any samtools-test deb science optional arch=all Checksums-Sha1: 98b24393629d63f2203f59c108b840b1e046f209 4457760 samtools_1.10.orig.tar.gz 0b1654cf7f6ae2b94ff5dbff4645ecf6efc5d2c6 20376 samtools_1.10-4.debian.tar.xz Checksums-Sha256: 382843e85fdb55868cebaaf2585c43776762d099581341b5803677de5ed117a9 4457760 samtools_1.10.orig.tar.gz b0da544ef217cd9cc1443fd85b262a288b123576632fe9f1525dee454447bb1e 20376 samtools_1.10-4.debian.tar.xz Files: dc147b46cabbb2c168529e474e947b1d 4457760 samtools_1.10.orig.tar.gz 58260557c4a5666110b9d314bafa1c53 20376 samtools_1.10-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl7soOARHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGOew//fDOIJjIMjCAgjIBwxkyhGKg+7Fm3wa12 M/DfhAmdcHm5RP5wSBesCoE/kyu9S8WwMYOCyUL6or8hwaFr5/RqxYzveGlpkIXJ bJaK5YLWuzDmRphSpAE9k+aIDKP+QBUHIPyZhfVPB8niyrSPcS8iIKP27C4MIjrW RsKaf2AkUgrIKf7GFUPcypNe/+NwuedyPBB4sgxcdn/KmGIBWyFXVn1NWf6mCmN+ 5SXORkRSfcWxGJ2CwwseEC1DZ2RzGEbHehO4IL+hHHfHy2zYFpf/D7IYmvrnlDmH hAWKgqrHuCT2Nw5e3qEEZcwgvIa1OSgICxjpv4NoUNDwJYBAWgyPiSsYGIkY9kHa /ehQCTN/CjRSYC5uS85+9f27LrRYAKZL3xytEt87MoBo5O7fKggG8KSsxIpifNRr LYITaHZBe4bMRNlnWJY9vc84ub3c947WHohB1jRwWYimcmnllPFKJkpLCAAPQ/k3 Ipf/dHqn82kTnlItvNZtEH6tteSAMrkSkSVZzefYix145wU+/06+lao/Yg6+qDLv CK8BsWgsidKZilNPat0b4e2Qf+51MsZgulZCyvBEgTIfIjyGU5cs+SrgSxPfuP0K c4jT/yD4uOfel9vxKR2F7nlb3yfoDVX5rMGRZL4gTbQhfgSzItC6el1ipJxTzmM6 2G4XgnJkkD0= =MeYm -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Fri Jun 19 11:26:24 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./samtools_1.10-4.dsc dpkg-source: info: extracting samtools in /<> dpkg-source: info: unpacking samtools_1.10.orig.tar.gz dpkg-source: info: unpacking samtools_1.10-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying spelling.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.s390x DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-0ce29899-5b41-47cf-897a-d77b498f9191 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -as390x -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package samtools dpkg-buildpackage: info: source version 1.10-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type s390x-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture s390x dpkg-source: info: using options from samtools-1.10/debian/source/options: --single-debian-patch --extend-diff-ignore=^(\.travis.*|README.md)$ debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' rm -f config.mk touch config.mk dh_auto_clean -- install -d /<>/debian/.debhelper/generated/_source/home /<>/debian/.debhelper/generated/_source/xdg-runtime-dir make -j1 distclean make[2]: Entering directory '/<>' rm -f test/*.new test/*.tmp test/*/*.new test/*/*.tmp test/*/*.tmp.* cd test/dat && rm -f test_input_*.bam.bai cd test/mpileup && rm -f FAIL-*.out* PASS-*.out* anomalous.[bc]*am indels.[bc]*am mpileup.*.[cs]*am mpileup.*.crai overlap50.[bc]*am expected/1.out xx#depth*.bam* rm -f *.o misc/*.o test/*.o test/*/*.o version.h ./lz4/lz4.o rm -f samtools libbam.a libst.a misc/ace2sam misc/maq2sam-long misc/maq2sam-short misc/md5fa misc/md5sum-lite misc/wgsim test/merge/test_bam_translate test/merge/test_rtrans_build test/merge/test_trans_tbl_init test/split/test_count_rg test/split/test_expand_format_string test/split/test_filter_header_rg test/split/test_parse_args test/vcf-miniview rm -f config.cache config.h config.log config.mk config.status rm -f TAGS rm -rf autom4te.cache make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/samtools.substvars debian/samtools-test.substvars debian/files rm -fr -- debian/samtools/ debian/tmp/ debian/samtools-test/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.before grep -q ^XDT_ configure.ac autoreconf -f -i configure.ac:63: warning: AC_CONFIG_SUBDIRS: you should use literals ../../lib/autoconf/status.m4:1097: AC_CONFIG_SUBDIRS is expanded from... m4/ax_with_htslib.m4:55: AX_WITH_HTSLIB is expanded from... configure.ac:63: the top level configure.ac:63: warning: AC_CONFIG_SUBDIRS: you should use literals ../../lib/autoconf/status.m4:1097: AC_CONFIG_SUBDIRS is expanded from... m4/ax_with_htslib.m4:55: AX_WITH_HTSLIB is expanded from... configure.ac:63: the top level configure.ac:63: warning: AC_CONFIG_SUBDIRS: you should use literals ../../lib/autoconf/status.m4:1097: AC_CONFIG_SUBDIRS is expanded from... m4/ax_with_htslib.m4:55: AX_WITH_HTSLIB is expanded from... configure.ac:63: the top level configure.ac:63: warning: AC_CONFIG_SUBDIRS: you should use literals ../../lib/autoconf/status.m4:1097: AC_CONFIG_SUBDIRS is expanded from... m4/ax_with_htslib.m4:55: AX_WITH_HTSLIB is expanded from... configure.ac:63: the top level find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.after debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' touch config.mk aclocal --force -I debian/ -I /usr/share/aclocal configure.ac:63: warning: AC_CONFIG_SUBDIRS: you should use literals ../../lib/autoconf/status.m4:1097: AC_CONFIG_SUBDIRS is expanded from... m4/ax_with_htslib.m4:55: AX_WITH_HTSLIB is expanded from... configure.ac:63: the top level autoconf configure.ac:63: warning: AC_CONFIG_SUBDIRS: you should use literals ../../lib/autoconf/status.m4:1097: AC_CONFIG_SUBDIRS is expanded from... m4/ax_with_htslib.m4:55: AX_WITH_HTSLIB is expanded from... configure.ac:63: the top level dh_auto_configure -- --with-htslib=system install -d /<>/debian/.debhelper/generated/_source/home /<>/debian/.debhelper/generated/_source/xdg-runtime-dir ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/s390x-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=s390x-linux-gnu --with-htslib=system configure: loading site script /etc/dpkg-cross/cross-config.s390x checking for s390x-linux-gnu-gcc... s390x-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether s390x-linux-gnu-gcc accepts -g... yes checking for s390x-linux-gnu-gcc option to accept ISO C89... none needed checking for grep that handles long lines and -e... /bin/grep checking for C compiler warning flags... -Wall checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for htslib/sam.h... yes checking for hts_version in -lhts... yes checking for Curses library... yes checking for working curses.h... yes checking for X/Open Enhanced Curses conformance... no checking for Curses color functions... yes checking for obsolete Curses functions... yes checking for zlib.h... yes checking for inflate in -lz... yes checking for library containing regcomp... none required configure: creating ./config.status config.status: creating config.mk config.status: creating config.h make[1]: Leaving directory '/<>' rm -f debian/samtools.debhelper.log debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build -- \ CFLAGS="$(dpkg-buildflags --get CFLAGS)" \ CPPFLAGS="\$(DFLAGS) \$(INCLUDES) $(dpkg-buildflags --get CPPFLAGS)" \ LDFLAGS="$(dpkg-buildflags --get LDFLAGS)" make -j1 "CFLAGS=-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security" "CPPFLAGS=\$(DFLAGS) \$(INCLUDES) -Wdate-time -D_FORTIFY_SOURCE=2" "LDFLAGS=-Wl,-z,relro -Wl,-z,now" make[2]: Entering directory '/<>' s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_index.o bam_index.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_plcmd.o bam_plcmd.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sam_view.o sam_view.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_fastq.o bam_fastq.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_cat.o bam_cat.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_md.o bam_md.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_reheader.o bam_reheader.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_sort.o bam_sort.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bedidx.o bedidx.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_rmdup.o bam_rmdup.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_rmdupse.o bam_rmdupse.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_mate.o bam_mate.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_stat.o bam_stat.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_color.o bam_color.c echo '#define SAMTOOLS_VERSION "1.10"' > version.h s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bamtk.o bamtk.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam2bcf.o bam2bcf.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam2bcf_indel.o bam2bcf_indel.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sample.o sample.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cut_target.o cut_target.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o phase.o phase.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam2depth.o bam2depth.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o coverage.o coverage.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o padding.o padding.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bedcov.o bedcov.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bamshuf.o bamshuf.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o faidx.o faidx.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dict.o dict.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o stats.o stats.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o stats_isize.o stats_isize.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_flags.o bam_flags.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_split.o bam_split.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_tview.o bam_tview.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_tview_curses.o bam_tview_curses.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_tview_html.o bam_tview_html.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_lpileup.o bam_lpileup.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_quickcheck.o bam_quickcheck.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_addrprg.o bam_addrprg.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_markdup.o bam_markdup.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tmp_file.o tmp_file.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o lz4/lz4.o lz4/lz4.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_aux.o bam_aux.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam.o bam.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sam.o sam.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_plbuf.o bam_plbuf.c ar -csru libbam.a bam_aux.o bam.o sam.o bam_plbuf.o ar: `u' modifier ignored since `D' is the default (see `U') s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sam_opts.o sam_opts.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sam_utils.o sam_utils.c ar -rcs libst.a sam_opts.o sam_utils.o s390x-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o samtools bam_index.o bam_plcmd.o sam_view.o bam_fastq.o bam_cat.o bam_md.o bam_reheader.o bam_sort.o bedidx.o bam_rmdup.o bam_rmdupse.o bam_mate.o bam_stat.o bam_color.o bamtk.o bam2bcf.o bam2bcf_indel.o sample.o cut_target.o phase.o bam2depth.o coverage.o padding.o bedcov.o bamshuf.o faidx.o dict.o stats.o stats_isize.o bam_flags.o bam_split.o bam_tview.o bam_tview_curses.o bam_tview_html.o bam_lpileup.o bam_quickcheck.o bam_addrprg.o bam_markdup.o tmp_file.o ./lz4/lz4.o libbam.a libst.a -lhts -lcurses -lm -lz -lpthread s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o misc/ace2sam.o misc/ace2sam.c s390x-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -o misc/ace2sam misc/ace2sam.o -lz s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DMAQ_LONGREADS -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o misc/maq2sam-long.o misc/maq2sam.c s390x-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -o misc/maq2sam-long misc/maq2sam-long.o -lz s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o misc/maq2sam-short.o misc/maq2sam.c s390x-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -o misc/maq2sam-short misc/maq2sam-short.o -lz s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o misc/md5fa.o misc/md5fa.c s390x-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o misc/md5fa misc/md5fa.o -lhts -lz s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o misc/md5sum-lite.o misc/md5sum-lite.c s390x-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o misc/md5sum-lite misc/md5sum-lite.o -lhts -lz s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o misc/wgsim.o misc/wgsim.c s390x-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o misc/wgsim misc/wgsim.o -lm -lhts -lz s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/merge/test_bam_translate.o test/merge/test_bam_translate.c s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test.o test/test.c s390x-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o test/merge/test_bam_translate test/merge/test_bam_translate.o test/test.o libst.a -lhts -lz -lpthread s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/merge/test_rtrans_build.o test/merge/test_rtrans_build.c s390x-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o test/merge/test_rtrans_build test/merge/test_rtrans_build.o test/test.o libst.a -lhts -lz -lpthread s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/merge/test_trans_tbl_init.o test/merge/test_trans_tbl_init.c s390x-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o test/merge/test_trans_tbl_init test/merge/test_trans_tbl_init.o test/test.o libst.a -lhts -lz -lpthread s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/split/test_count_rg.o test/split/test_count_rg.c s390x-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o test/split/test_count_rg test/split/test_count_rg.o test/test.o libst.a -lhts -lz -lpthread s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/split/test_expand_format_string.o test/split/test_expand_format_string.c s390x-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o test/split/test_expand_format_string test/split/test_expand_format_string.o test/test.o libst.a -lhts -lz -lpthread s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/split/test_filter_header_rg.o test/split/test_filter_header_rg.c s390x-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o test/split/test_filter_header_rg test/split/test_filter_header_rg.o test/test.o libst.a -lhts -lz -lpthread s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/split/test_parse_args.o test/split/test_parse_args.c s390x-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o test/split/test_parse_args test/split/test_parse_args.o test/test.o libst.a -lhts -lz -lpthread s390x-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I./lz4 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/vcf-miniview.o test/vcf-miniview.c s390x-linux-gnu-gcc -L./lz4 -Wl,-z,relro -Wl,-z,now -o test/vcf-miniview test/vcf-miniview.o -lhts -lz -lpthread make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_testroot -a dh_prep -a rm -f -- debian/samtools.substvars rm -fr -- debian/.debhelper/generated/samtools/ debian/samtools/ debian/tmp/ rm -f debian/samtools.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/<>' dh_auto_install -- \ prefix=/usr install -d /<>/debian/tmp make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no prefix=/usr make[2]: Entering directory '/<>' mkdir -p -m 755 /<>/debian/tmp/usr/bin /<>/debian/tmp/usr/bin /<>/debian/tmp/usr/share/man/man1 install -p samtools /<>/debian/tmp/usr/bin install -p misc/ace2sam misc/maq2sam-long misc/maq2sam-short misc/md5fa misc/md5sum-lite misc/wgsim /<>/debian/tmp/usr/bin install -p misc/blast2sam.pl misc/bowtie2sam.pl misc/export2sam.pl misc/interpolate_sam.pl misc/novo2sam.pl misc/plot-bamstats misc/psl2sam.pl misc/sam2vcf.pl misc/samtools.pl misc/seq_cache_populate.pl misc/soap2sam.pl misc/wgsim_eval.pl misc/zoom2sam.pl /<>/debian/tmp/usr/bin install -p -m 644 doc/samtools*.1 misc/wgsim.1 /<>/debian/tmp/usr/share/man/man1 make[2]: Leaving directory '/<>' make clean make[2]: Entering directory '/<>' rm -f test/*.new test/*.tmp test/*/*.new test/*/*.tmp test/*/*.tmp.* cd test/dat && rm -f test_input_*.bam.bai cd test/mpileup && rm -f FAIL-*.out* PASS-*.out* anomalous.[bc]*am indels.[bc]*am mpileup.*.[cs]*am mpileup.*.crai overlap50.[bc]*am expected/1.out xx#depth*.bam* rm -f *.o misc/*.o test/*.o test/*/*.o version.h ./lz4/lz4.o rm -f samtools libbam.a libst.a misc/ace2sam misc/maq2sam-long misc/maq2sam-short misc/md5fa misc/md5sum-lite misc/wgsim test/merge/test_bam_translate test/merge/test_rtrans_build test/merge/test_trans_tbl_init test/split/test_count_rg test/split/test_expand_format_string test/split/test_filter_header_rg test/split/test_parse_args test/vcf-miniview make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' rm -f debian/samtools.debhelper.log debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install install -d debian/samtools//usr cp --reflink=auto -a debian/tmp/usr/bin debian/samtools//usr/ install -d debian/samtools//usr/share/man cp --reflink=auto -a debian/tmp/usr/share/man/man1 debian/samtools//usr/share/man/ install -d debian/samtools/usr/share/commonwl/ cp --reflink=auto -a ./debian/samtools-faidx.cwl ./debian/samtools-index.cwl ./debian/samtools-rmdup.cwl ./debian/samtools-sort.cwl ./debian/samtools-view.cwl debian/samtools/usr/share/commonwl// cp --reflink=auto -a ./debian/mans/ace2sam.1 ./debian/mans/samtools.pl.1 ./debian/mans/wgsim.1 debian/samtools/usr/share/man/man1/ install -d debian/.debhelper/generated/samtools install -d debian/.debhelper/generated/samtools-test # Fix Perl interpreter PATH for pscript in `grep -Rl '#!/usr/bin/env \+perl' debian/*` ; do \ sed -i '1s?#!/usr/bin/env \+perl?#!/usr/bin/perl?' ${pscript} ; \ done make[1]: Leaving directory '/<>' dh_installdocs -a install -d debian/samtools/usr/share/doc/samtools cp --reflink=auto -a ./AUTHORS debian/samtools/usr/share/doc/samtools cp --reflink=auto -a ./README debian/samtools/usr/share/doc/samtools chmod -R u\+rw,go=rX debian/samtools/usr/share/doc install -p -m0644 debian/README.Debian debian/samtools/usr/share/doc/samtools/README.Debian install -p -m0644 debian/copyright debian/samtools/usr/share/doc/samtools/copyright rm -f debian/samtools.debhelper.log debian/rules override_dh_installchangelogs make[1]: Entering directory '/<>' dh_installchangelogs NEWS install -p -m0644 debian/changelog debian/samtools/usr/share/doc/samtools/changelog.Debian install -p -m0644 debian/NEWS debian/samtools/usr/share/doc/samtools/NEWS.Debian install -p -m0644 NEWS debian/samtools/usr/share/doc/samtools/changelog make[1]: Leaving directory '/<>' dh_installexamples -a install -d debian/samtools/usr/share/doc/samtools/examples cp --reflink=auto -a ./examples/00README.txt debian/samtools/usr/share/doc/samtools/examples cp --reflink=auto -a ./examples/ex1.fa debian/samtools/usr/share/doc/samtools/examples cp --reflink=auto -a ./examples/ex1.sam.gz debian/samtools/usr/share/doc/samtools/examples cp --reflink=auto -a ./examples/toy.fa debian/samtools/usr/share/doc/samtools/examples cp --reflink=auto -a ./examples/toy.sam debian/samtools/usr/share/doc/samtools/examples dh_installman -a rm -f debian/samtools/usr/share/man/man1/samtools-fastq.1 ln -s samtools-fasta.1 debian/samtools/usr/share/man/man1/samtools-fastq.1 man-recode --to-code UTF-8 --suffix .dh-new debian/samtools/usr/share/man/man1/ace2sam.1 debian/samtools/usr/share/man/man1/samtools-addreplacerg.1 debian/samtools/usr/share/man/man1/samtools-bedcov.1 debian/samtools/usr/share/man/man1/samtools-calmd.1 debian/samtools/usr/share/man/man1/samtools-cat.1 debian/samtools/usr/share/man/man1/samtools-collate.1 debian/samtools/usr/share/man/man1/samtools-depad.1 debian/samtools/usr/share/man/man1/samtools-depth.1 debian/samtools/usr/share/man/man1/samtools-dict.1 debian/samtools/usr/share/man/man1/samtools-faidx.1 debian/samtools/usr/share/man/man1/samtools-fasta.1 debian/samtools/usr/share/man/man1/samtools-fixmate.1 debian/samtools/usr/share/man/man1/samtools-flags.1 debian/samtools/usr/share/man/man1/samtools-flagstat.1 debian/samtools/usr/share/man/man1/samtools-fqidx.1 debian/samtools/usr/share/man/man1/samtools-idxstats.1 debian/samtools/usr/share/man/man1/samtools-index.1 debian/samtools/usr/share/man/man1/samtools-markdup.1 debian/samtools/usr/share/man/man1/samtools-merge.1 debian/samtools/usr/share/man/man1/samtools-mpileup.1 debian/samtools/usr/share/man/man1/samtools-phase.1 debian/samtools/usr/share/man/man1/samtools-quickcheck.1 debian/samtools/usr/share/man/man1/samtools-reheader.1 debian/samtools/usr/share/man/man1/samtools-rmdup.1 debian/samtools/usr/share/man/man1/samtools-sort.1 debian/samtools/usr/share/man/man1/samtools-split.1 debian/samtools/usr/share/man/man1/samtools-stats.1 debian/samtools/usr/share/man/man1/samtools-targetcut.1 debian/samtools/usr/share/man/man1/samtools-tview.1 debian/samtools/usr/share/man/man1/samtools-view.1 debian/samtools/usr/share/man/man1/samtools.1 debian/samtools/usr/share/man/man1/samtools.pl.1 debian/samtools/usr/share/man/man1/wgsim.1 mv debian/samtools/usr/share/man/man1/ace2sam.1.dh-new debian/samtools/usr/share/man/man1/ace2sam.1 mv debian/samtools/usr/share/man/man1/samtools-addreplacerg.1.dh-new debian/samtools/usr/share/man/man1/samtools-addreplacerg.1 mv debian/samtools/usr/share/man/man1/samtools-bedcov.1.dh-new debian/samtools/usr/share/man/man1/samtools-bedcov.1 mv debian/samtools/usr/share/man/man1/samtools-calmd.1.dh-new debian/samtools/usr/share/man/man1/samtools-calmd.1 mv debian/samtools/usr/share/man/man1/samtools-cat.1.dh-new debian/samtools/usr/share/man/man1/samtools-cat.1 mv debian/samtools/usr/share/man/man1/samtools-collate.1.dh-new debian/samtools/usr/share/man/man1/samtools-collate.1 mv debian/samtools/usr/share/man/man1/samtools-depad.1.dh-new debian/samtools/usr/share/man/man1/samtools-depad.1 mv debian/samtools/usr/share/man/man1/samtools-depth.1.dh-new debian/samtools/usr/share/man/man1/samtools-depth.1 mv debian/samtools/usr/share/man/man1/samtools-dict.1.dh-new debian/samtools/usr/share/man/man1/samtools-dict.1 mv debian/samtools/usr/share/man/man1/samtools-faidx.1.dh-new debian/samtools/usr/share/man/man1/samtools-faidx.1 mv debian/samtools/usr/share/man/man1/samtools-fasta.1.dh-new debian/samtools/usr/share/man/man1/samtools-fasta.1 mv debian/samtools/usr/share/man/man1/samtools-fixmate.1.dh-new debian/samtools/usr/share/man/man1/samtools-fixmate.1 mv debian/samtools/usr/share/man/man1/samtools-flags.1.dh-new debian/samtools/usr/share/man/man1/samtools-flags.1 mv debian/samtools/usr/share/man/man1/samtools-flagstat.1.dh-new debian/samtools/usr/share/man/man1/samtools-flagstat.1 mv debian/samtools/usr/share/man/man1/samtools-fqidx.1.dh-new debian/samtools/usr/share/man/man1/samtools-fqidx.1 mv debian/samtools/usr/share/man/man1/samtools-idxstats.1.dh-new debian/samtools/usr/share/man/man1/samtools-idxstats.1 mv debian/samtools/usr/share/man/man1/samtools-index.1.dh-new debian/samtools/usr/share/man/man1/samtools-index.1 mv debian/samtools/usr/share/man/man1/samtools-markdup.1.dh-new debian/samtools/usr/share/man/man1/samtools-markdup.1 mv debian/samtools/usr/share/man/man1/samtools-merge.1.dh-new debian/samtools/usr/share/man/man1/samtools-merge.1 mv debian/samtools/usr/share/man/man1/samtools-mpileup.1.dh-new debian/samtools/usr/share/man/man1/samtools-mpileup.1 mv debian/samtools/usr/share/man/man1/samtools-phase.1.dh-new debian/samtools/usr/share/man/man1/samtools-phase.1 mv debian/samtools/usr/share/man/man1/samtools-quickcheck.1.dh-new debian/samtools/usr/share/man/man1/samtools-quickcheck.1 mv debian/samtools/usr/share/man/man1/samtools-reheader.1.dh-new debian/samtools/usr/share/man/man1/samtools-reheader.1 mv debian/samtools/usr/share/man/man1/samtools-rmdup.1.dh-new debian/samtools/usr/share/man/man1/samtools-rmdup.1 mv debian/samtools/usr/share/man/man1/samtools-sort.1.dh-new debian/samtools/usr/share/man/man1/samtools-sort.1 mv debian/samtools/usr/share/man/man1/samtools-split.1.dh-new debian/samtools/usr/share/man/man1/samtools-split.1 mv debian/samtools/usr/share/man/man1/samtools-stats.1.dh-new debian/samtools/usr/share/man/man1/samtools-stats.1 mv debian/samtools/usr/share/man/man1/samtools-targetcut.1.dh-new debian/samtools/usr/share/man/man1/samtools-targetcut.1 mv debian/samtools/usr/share/man/man1/samtools-tview.1.dh-new debian/samtools/usr/share/man/man1/samtools-tview.1 mv debian/samtools/usr/share/man/man1/samtools-view.1.dh-new debian/samtools/usr/share/man/man1/samtools-view.1 mv debian/samtools/usr/share/man/man1/samtools.1.dh-new debian/samtools/usr/share/man/man1/samtools.1 mv debian/samtools/usr/share/man/man1/samtools.pl.1.dh-new debian/samtools/usr/share/man/man1/samtools.pl.1 mv debian/samtools/usr/share/man/man1/wgsim.1.dh-new debian/samtools/usr/share/man/man1/wgsim.1 chmod 0644 -- debian/samtools/usr/share/man/man1/ace2sam.1 debian/samtools/usr/share/man/man1/samtools-addreplacerg.1 debian/samtools/usr/share/man/man1/samtools-bedcov.1 debian/samtools/usr/share/man/man1/samtools-calmd.1 debian/samtools/usr/share/man/man1/samtools-cat.1 debian/samtools/usr/share/man/man1/samtools-collate.1 debian/samtools/usr/share/man/man1/samtools-depad.1 debian/samtools/usr/share/man/man1/samtools-depth.1 debian/samtools/usr/share/man/man1/samtools-dict.1 debian/samtools/usr/share/man/man1/samtools-faidx.1 debian/samtools/usr/share/man/man1/samtools-fasta.1 debian/samtools/usr/share/man/man1/samtools-fixmate.1 debian/samtools/usr/share/man/man1/samtools-flags.1 debian/samtools/usr/share/man/man1/samtools-flagstat.1 debian/samtools/usr/share/man/man1/samtools-fqidx.1 debian/samtools/usr/share/man/man1/samtools-idxstats.1 debian/samtools/usr/share/man/man1/samtools-index.1 debian/samtools/usr/share/man/man1/samtools-markdup.1 debian/samtools/usr/share/man/man1/samtools-merge.1 debian/samtools/usr/share/man/man1/samtools-mpileup.1 debian/samtools/usr/share/man/man1/samtools-phase.1 debian/samtools/usr/share/man/man1/samtools-quickcheck.1 debian/samtools/usr/share/man/man1/samtools-reheader.1 debian/samtools/usr/share/man/man1/samtools-rmdup.1 debian/samtools/usr/share/man/man1/samtools-sort.1 debian/samtools/usr/share/man/man1/samtools-split.1 debian/samtools/usr/share/man/man1/samtools-stats.1 debian/samtools/usr/share/man/man1/samtools-targetcut.1 debian/samtools/usr/share/man/man1/samtools-tview.1 debian/samtools/usr/share/man/man1/samtools-view.1 debian/samtools/usr/share/man/man1/samtools.1 debian/samtools/usr/share/man/man1/samtools.pl.1 debian/samtools/usr/share/man/man1/wgsim.1 dh_lintian -a install -d debian/samtools/usr/share/lintian/overrides install -p -m0644 debian/samtools.lintian-overrides debian/samtools/usr/share/lintian/overrides/samtools dh_perl -a (grep -a -s -v perl:Depends debian/samtools.substvars; echo perl:Depends=perl:any) > debian/samtools.substvars.new mv debian/samtools.substvars.new debian/samtools.substvars dh_link -a rm -f debian/samtools/usr/share/man/man1/samtools-fastq.1 ln -s samtools-fasta.1 debian/samtools/usr/share/man/man1/samtools-fastq.1 dh_strip_nondeterminism -a Using 1592559700 as canonical time Normalizing debian/samtools/usr/share/doc/samtools/examples/ex1.sam.gz using File::StripNondeterminism::handlers::gzip dh_compress -a cd debian/samtools chmod a-x usr/share/doc/samtools/NEWS.Debian usr/share/doc/samtools/changelog usr/share/doc/samtools/changelog.Debian usr/share/man/man1/ace2sam.1 usr/share/man/man1/samtools-addreplacerg.1 usr/share/man/man1/samtools-bedcov.1 usr/share/man/man1/samtools-calmd.1 usr/share/man/man1/samtools-cat.1 usr/share/man/man1/samtools-collate.1 usr/share/man/man1/samtools-depad.1 usr/share/man/man1/samtools-depth.1 usr/share/man/man1/samtools-dict.1 usr/share/man/man1/samtools-faidx.1 usr/share/man/man1/samtools-fasta.1 usr/share/man/man1/samtools-fixmate.1 usr/share/man/man1/samtools-flags.1 usr/share/man/man1/samtools-flagstat.1 usr/share/man/man1/samtools-fqidx.1 usr/share/man/man1/samtools-idxstats.1 usr/share/man/man1/samtools-index.1 usr/share/man/man1/samtools-markdup.1 usr/share/man/man1/samtools-merge.1 usr/share/man/man1/samtools-mpileup.1 usr/share/man/man1/samtools-phase.1 usr/share/man/man1/samtools-quickcheck.1 usr/share/man/man1/samtools-reheader.1 usr/share/man/man1/samtools-rmdup.1 usr/share/man/man1/samtools-sort.1 usr/share/man/man1/samtools-split.1 usr/share/man/man1/samtools-stats.1 usr/share/man/man1/samtools-targetcut.1 usr/share/man/man1/samtools-tview.1 usr/share/man/man1/samtools-view.1 usr/share/man/man1/samtools.1 usr/share/man/man1/samtools.pl.1 usr/share/man/man1/wgsim.1 gzip -9nf usr/share/doc/samtools/NEWS.Debian usr/share/doc/samtools/changelog usr/share/doc/samtools/changelog.Debian usr/share/man/man1/ace2sam.1 usr/share/man/man1/samtools-addreplacerg.1 usr/share/man/man1/samtools-bedcov.1 usr/share/man/man1/samtools-calmd.1 usr/share/man/man1/samtools-cat.1 usr/share/man/man1/samtools-collate.1 usr/share/man/man1/samtools-depad.1 usr/share/man/man1/samtools-depth.1 usr/share/man/man1/samtools-dict.1 usr/share/man/man1/samtools-faidx.1 usr/share/man/man1/samtools-fasta.1 usr/share/man/man1/samtools-fixmate.1 usr/share/man/man1/samtools-flags.1 usr/share/man/man1/samtools-flagstat.1 usr/share/man/man1/samtools-fqidx.1 usr/share/man/man1/samtools-idxstats.1 usr/share/man/man1/samtools-index.1 usr/share/man/man1/samtools-markdup.1 usr/share/man/man1/samtools-merge.1 usr/share/man/man1/samtools-mpileup.1 usr/share/man/man1/samtools-phase.1 usr/share/man/man1/samtools-quickcheck.1 usr/share/man/man1/samtools-reheader.1 usr/share/man/man1/samtools-rmdup.1 usr/share/man/man1/samtools-sort.1 usr/share/man/man1/samtools-split.1 usr/share/man/man1/samtools-stats.1 usr/share/man/man1/samtools-targetcut.1 usr/share/man/man1/samtools-tview.1 usr/share/man/man1/samtools-view.1 usr/share/man/man1/samtools.1 usr/share/man/man1/samtools.pl.1 usr/share/man/man1/wgsim.1 cd '/<>' rm -f debian/samtools/usr/share/man/man1/samtools-fastq.1 debian/samtools/usr/share/man/man1/samtools-fastq.1.gz ln -s samtools-fasta.1.gz debian/samtools/usr/share/man/man1/samtools-fastq.1.gz dh_fixperms -a find debian/samtools ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/samtools/usr/share/doc -type f -a -true -a ! -regex 'debian/samtools/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/samtools/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/samtools/usr/share/man debian/samtools/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/samtools -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/samtools/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing -a dh_dwz -a -a install -d debian/samtools/usr/lib/debug/.dwz/s390x-linux-gnu dwz -mdebian/samtools/usr/lib/debug/.dwz/s390x-linux-gnu/samtools.debug -M/usr/lib/debug/.dwz/s390x-linux-gnu/samtools.debug -- debian/samtools/usr/bin/ace2sam debian/samtools/usr/bin/maq2sam-long debian/samtools/usr/bin/maq2sam-short debian/samtools/usr/bin/md5fa debian/samtools/usr/bin/md5sum-lite debian/samtools/usr/bin/samtools debian/samtools/usr/bin/wgsim dwz: debian/samtools/usr/bin/samtools: DWARF compression not beneficial - old size 628523 new size 648420 s390x-linux-gnu-objcopy --compress-debug-sections debian/samtools/usr/lib/debug/.dwz/s390x-linux-gnu/samtools.debug dh_strip -a -a install -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/af s390x-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/wgsim debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/af/897a2a0766cb48f3a717f23257f75188c9312f.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/af/897a2a0766cb48f3a717f23257f75188c9312f.debug s390x-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/samtools/usr/bin/wgsim s390x-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/af/897a2a0766cb48f3a717f23257f75188c9312f.debug debian/samtools/usr/bin/wgsim install -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/2e s390x-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/md5sum-lite debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/2e/c974c4609fd778846ea04d89fc73d8b2590d15.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/2e/c974c4609fd778846ea04d89fc73d8b2590d15.debug s390x-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/samtools/usr/bin/md5sum-lite s390x-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/2e/c974c4609fd778846ea04d89fc73d8b2590d15.debug debian/samtools/usr/bin/md5sum-lite install -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/88 s390x-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/md5fa debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/88/4e98ca9ed2d05d74dd1f250e3e160788c1edd5.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/88/4e98ca9ed2d05d74dd1f250e3e160788c1edd5.debug s390x-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/samtools/usr/bin/md5fa s390x-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/88/4e98ca9ed2d05d74dd1f250e3e160788c1edd5.debug debian/samtools/usr/bin/md5fa install -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/69 s390x-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/maq2sam-short debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/69/5dfccb9cee48b24c5066ef2934cdf64ed51d1c.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/69/5dfccb9cee48b24c5066ef2934cdf64ed51d1c.debug s390x-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/samtools/usr/bin/maq2sam-short s390x-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/69/5dfccb9cee48b24c5066ef2934cdf64ed51d1c.debug debian/samtools/usr/bin/maq2sam-short install -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/4f s390x-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/maq2sam-long debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/4f/9fdc6bf1b839442b25b3ccd0389be4182082b6.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/4f/9fdc6bf1b839442b25b3ccd0389be4182082b6.debug s390x-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/samtools/usr/bin/maq2sam-long s390x-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/4f/9fdc6bf1b839442b25b3ccd0389be4182082b6.debug debian/samtools/usr/bin/maq2sam-long install -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/a1 s390x-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/ace2sam debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/a1/3d7368c72634d9a0e1f8ad77012f465f448c53.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/a1/3d7368c72634d9a0e1f8ad77012f465f448c53.debug s390x-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/samtools/usr/bin/ace2sam s390x-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/a1/3d7368c72634d9a0e1f8ad77012f465f448c53.debug debian/samtools/usr/bin/ace2sam install -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/81 s390x-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/samtools debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/81/0731777d74ba67f891e106fc85028f5c589e0b.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/81/0731777d74ba67f891e106fc85028f5c589e0b.debug s390x-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/samtools/usr/bin/samtools s390x-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/81/0731777d74ba67f891e106fc85028f5c589e0b.debug debian/samtools/usr/bin/samtools install -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/samtools/usr/lib/debug/.dwz/s390x-linux-gnu debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/samtools/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/samtools/usr/lib/debug install -d debian/.debhelper/samtools/dbgsym-root/usr/share/doc ln -s samtools debian/.debhelper/samtools/dbgsym-root/usr/share/doc/samtools-dbgsym dh_makeshlibs -a -a rm -f debian/samtools/DEBIAN/shlibs dh_shlibdeps -a -a install -d debian/samtools/DEBIAN dpkg-shlibdeps -Tdebian/samtools.substvars debian/samtools/usr/bin/samtools debian/samtools/usr/bin/ace2sam debian/samtools/usr/bin/maq2sam-long debian/samtools/usr/bin/maq2sam-short debian/samtools/usr/bin/md5fa debian/samtools/usr/bin/md5sum-lite debian/samtools/usr/bin/wgsim dh_installdeb -a dh_gencontrol -a echo misc:Depends= >> debian/samtools.substvars echo misc:Pre-Depends= >> debian/samtools.substvars install -d debian/.debhelper/samtools/dbgsym-root/DEBIAN dpkg-gencontrol -psamtools -ldebian/changelog -Tdebian/samtools.substvars -Pdebian/.debhelper/samtools/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -DPackage=samtools-dbgsym "-DDepends=samtools (= \${binary:Version})" "-DDescription=debug symbols for samtools" "-DBuild-Ids=2ec974c4609fd778846ea04d89fc73d8b2590d15 4f9fdc6bf1b839442b25b3ccd0389be4182082b6 695dfccb9cee48b24c5066ef2934cdf64ed51d1c 810731777d74ba67f891e106fc85028f5c589e0b 884e98ca9ed2d05d74dd1f250e3e160788c1edd5 a13d7368c72634d9a0e1f8ad77012f465f448c53 af897a2a0766cb48f3a717f23257f75188c9312f" -DSection=debug -UMulti-Arch -UReplaces -UBreaks dpkg-gencontrol: warning: package samtools: substitution variable ${perl:Depends} unused, but is defined chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/DEBIAN/control dpkg-gencontrol -psamtools -ldebian/changelog -Tdebian/samtools.substvars -Pdebian/samtools dpkg-gencontrol: warning: package samtools: substitution variable ${perl:Depends} unused, but is defined chmod 0644 -- debian/samtools/DEBIAN/control dh_md5sums -a cd debian/samtools >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/samtools/DEBIAN/md5sums cd debian/.debhelper/samtools/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/DEBIAN/md5sums dh_builddeb -a dpkg-deb --root-owner-group --build debian/samtools .. dpkg-deb: building package 'samtools' in '../samtools_1.10-4_s390x.deb'. dpkg-deb --root-owner-group --build debian/.debhelper/samtools/dbgsym-root .. dpkg-deb: building package 'samtools-dbgsym' in '../samtools-dbgsym_1.10-4_s390x.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../samtools_1.10-4_s390x.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-source: info: using options from samtools-1.10/debian/source/options: --single-debian-patch --extend-diff-ignore=^(\.travis.*|README.md)$ dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-06-20T09:09:06Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ samtools_1.10-4_s390x.changes: ------------------------------ Format: 1.8 Date: Fri, 19 Jun 2020 11:41:40 +0200 Source: samtools Binary: samtools samtools-dbgsym Built-For-Profiles: cross nocheck Architecture: s390x Version: 1.10-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: samtools - processing sequence alignments in SAM, BAM and CRAM formats Closes: 963093 Changes: samtools (1.10-4) unstable; urgency=medium . * cwltools only "Suggests" not "Recommends" * There are no Python scripts provided in samtools any more Closes: #963093 * Standards-Version: 4.5.0 (routine-update) * debhelper-compat 13 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) Checksums-Sha1: 83782bdbe3e99b39471d9e4a8e816c4a08b1c1d0 815700 samtools-dbgsym_1.10-4_s390x.deb 01c5de7b1e28fdba56d4a5ebd693540a78d9e29b 5585 samtools_1.10-4_s390x.buildinfo d8e10af71a9c758dd6687340decc2a79e34f4718 496140 samtools_1.10-4_s390x.deb Checksums-Sha256: 02ed0555b2b310619f30c119e9a673c480a244bdef4f635ecb42d6a94c64f55a 815700 samtools-dbgsym_1.10-4_s390x.deb 16436386cf87067ab63b4743a3a8d2b0abf6c3bb563a45086d6d1547ffcde690 5585 samtools_1.10-4_s390x.buildinfo 3edd059bd8f4aaa4cbefbfa1160e220baec8752f687565f57b738f7af98ee87e 496140 samtools_1.10-4_s390x.deb Files: 9fee2a9de01878a17cb5de7d2e004ff3 815700 debug optional samtools-dbgsym_1.10-4_s390x.deb b47a55c9e60b3c29831f06a25edc0ed6 5585 science optional samtools_1.10-4_s390x.buildinfo 743a5043b3e4c34fc48a94f9db4578ff 496140 science optional samtools_1.10-4_s390x.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: samtools Binary: samtools samtools-test Architecture: s390x Version: 1.10-4 Checksums-Md5: 9fee2a9de01878a17cb5de7d2e004ff3 815700 samtools-dbgsym_1.10-4_s390x.deb 743a5043b3e4c34fc48a94f9db4578ff 496140 samtools_1.10-4_s390x.deb Checksums-Sha1: 83782bdbe3e99b39471d9e4a8e816c4a08b1c1d0 815700 samtools-dbgsym_1.10-4_s390x.deb d8e10af71a9c758dd6687340decc2a79e34f4718 496140 samtools_1.10-4_s390x.deb Checksums-Sha256: 02ed0555b2b310619f30c119e9a673c480a244bdef4f635ecb42d6a94c64f55a 815700 samtools-dbgsym_1.10-4_s390x.deb 3edd059bd8f4aaa4cbefbfa1160e220baec8752f687565f57b738f7af98ee87e 496140 samtools_1.10-4_s390x.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sat, 20 Jun 2020 09:09:06 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11.1), autoconf-archive (= 20190106-2.1), automake (= 1:1.16.2-1), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-6), bash-completion (= 1:2.10-1), binutils (= 2.34-8), binutils-common (= 2.34-8), binutils-x86-64-linux-gnu (= 2.34-8), bsdmainutils (= 12.1.1), bsdutils (= 1:2.35.2-3), build-essential (= 12.8), bzip2 (= 1.0.8-3), coreutils (= 8.30-3+b1), cpp (= 4:9.2.1-3.1), cpp-9 (= 9.3.0-14), dash (= 0.5.10.2-7), debconf (= 1.5.74), debhelper (= 13.1), debianutils (= 4.11), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.8.1-1), diffutils (= 1:3.7-3), dpkg (= 1.19.7), dpkg-dev (= 1.19.7), dwz (= 0.13-5), file (= 1:5.38-5), findutils (= 4.7.0-1), g++ (= 4:9.2.1-3.1), g++-9 (= 9.3.0-14), gcc (= 4:9.2.1-3.1), gcc-10-base (= 10.1.0-4), gcc-9 (= 9.3.0-14), gcc-9-base (= 9.3.0-14), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), grep (= 3.4-1), groff-base (= 1.22.4-5), gzip (= 1.10-2), hostname (= 3.23), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libarchive-zip-perl (= 1.68-1), libasan5 (= 9.3.0-14), libatomic1 (= 10.1.0-4), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3), libaudit1 (= 1:2.8.5-3+b1), libbinutils (= 2.34-8), libblkid1 (= 2.35.2-3), libbrotli1 (= 1.0.7-6.1), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.8-3), libbz2-dev (= 1.0.8-3), libc-bin (= 2.30-8), libc-dev-bin (= 2.30-8), libc6 (= 2.30-8), libc6-dev (= 2.30-8), libcap-ng0 (= 0.7.9-2.2), libcc1-0 (= 10.1.0-4), libcom-err2 (= 1.45.6-1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.16-1), libcrypt1 (= 1:4.4.16-1), libctf-nobfd0 (= 2.34-8), libctf0 (= 2.34-8), libcurl3-gnutls (= 7.68.0-1), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.252), libdebhelper-perl (= 13.1), libdeflate0 (= 1.6-1), libdpkg-perl (= 1.19.7), libelf1 (= 0.176-1.1), libffi7 (= 3.3-4), libfile-stripnondeterminism-perl (= 1.8.1-1), libgcc-9-dev (= 9.3.0-14), libgcc-s1 (= 10.1.0-4), libgcrypt20 (= 1.8.5-5), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libglib2.0-0 (= 2.64.3-1), libgmp10 (= 2:6.2.0+dfsg-6), libgnutls30 (= 3.6.14-2), libgomp1 (= 10.1.0-4), libgpg-error0 (= 1.38-1), libgssapi-krb5-2 (= 1.17-10), libhogweed5 (= 3.5.1+really3.5.1-2), libhts-dev (= 1.10.2-3), libhts3 (= 1.10.2-3), libicu67 (= 67.1-2), libidn2-0 (= 2.3.0-1), libisl22 (= 0.22.1-1), libitm1 (= 10.1.0-4), libk5crypto3 (= 1.17-10), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.17-10), libkrb5support0 (= 1.17-10), libldap-2.4-2 (= 2.4.50+dfsg-1), libldap-common (= 2.4.50+dfsg-1), liblsan0 (= 10.1.0-4), liblz4-1 (= 1.9.2-2), liblzma-dev (= 5.2.4-1+b1), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-5), libmagic1 (= 1:5.38-5), libmount1 (= 2.35.2-3), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libncurses-dev (= 6.2-1), libncurses5-dev (= 6.2-1), libncurses6 (= 6.2-1), libncursesw6 (= 6.2-1), libnettle7 (= 3.5.1+really3.5.1-2), libnghttp2-14 (= 1.41.0-2), libp11-kit0 (= 0.23.20-1), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-13), libperl5.30 (= 5.30.3-4), libpipeline1 (= 1.5.2-2), libpsl5 (= 0.21.0-1.1), libquadmath0 (= 10.1.0-4), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b1), libsasl2-2 (= 2.1.27+dfsg-2), libsasl2-modules-db (= 2.1.27+dfsg-2), libseccomp2 (= 2.4.3-1+b1), libselinux1 (= 3.0-1+b3), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.35.2-3), libssh2-1 (= 1.8.0-2.1), libssl1.1 (= 1.1.1g-1), libstdc++-9-dev (= 9.3.0-14), libstdc++6 (= 10.1.0-4), libsub-override-perl (= 0.09-2), libsystemd0 (= 245.6-1), libtasn1-6 (= 4.16.0-2), libtinfo6 (= 6.2-1), libtool (= 2.4.6-14), libtsan0 (= 10.1.0-4), libubsan1 (= 10.1.0-4), libuchardet0 (= 0.0.7-1), libudev1 (= 245.6-1), libunistring2 (= 0.9.10-4), libuuid1 (= 2.35.2-3), libxml2 (= 2.9.10+dfsg-5+b1), linux-libc-dev (= 5.6.14-2), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.3-3), man-db (= 2.9.2-1), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2-1), ncurses-bin (= 6.2-1), patch (= 2.7.6-6), perl (= 5.30.3-4), perl-base (= 5.30.3-4), perl-modules-5.30 (= 5.30.3-4), pkg-config (= 0.29.2-1), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-3), tabix (= 1.10.2-3), tar (= 1.30+dfsg-7), util-linux (= 2.35.2-3), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1592559700" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ samtools-dbgsym_1.10-4_s390x.deb -------------------------------- new Debian package, version 2.0. size 815700 bytes: control archive=908 bytes. 618 bytes, 12 lines control 826 bytes, 8 lines md5sums Package: samtools-dbgsym Source: samtools Version: 1.10-4 Auto-Built-Package: debug-symbols Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 887 Depends: samtools (= 1.10-4) Section: debug Priority: optional Description: debug symbols for samtools Build-Ids: 2ec974c4609fd778846ea04d89fc73d8b2590d15 4f9fdc6bf1b839442b25b3ccd0389be4182082b6 695dfccb9cee48b24c5066ef2934cdf64ed51d1c 810731777d74ba67f891e106fc85028f5c589e0b 884e98ca9ed2d05d74dd1f250e3e160788c1edd5 a13d7368c72634d9a0e1f8ad77012f465f448c53 af897a2a0766cb48f3a717f23257f75188c9312f drwxr-xr-x root/root 0 2020-06-19 09:41 ./ drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/ drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/lib/ drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/lib/debug/.build-id/2e/ -rw-r--r-- root/root 8216 2020-06-19 09:41 ./usr/lib/debug/.build-id/2e/c974c4609fd778846ea04d89fc73d8b2590d15.debug drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/lib/debug/.build-id/4f/ -rw-r--r-- root/root 11968 2020-06-19 09:41 ./usr/lib/debug/.build-id/4f/9fdc6bf1b839442b25b3ccd0389be4182082b6.debug drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/lib/debug/.build-id/69/ -rw-r--r-- root/root 11968 2020-06-19 09:41 ./usr/lib/debug/.build-id/69/5dfccb9cee48b24c5066ef2934cdf64ed51d1c.debug drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/lib/debug/.build-id/81/ -rw-r--r-- root/root 786208 2020-06-19 09:41 ./usr/lib/debug/.build-id/81/0731777d74ba67f891e106fc85028f5c589e0b.debug drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/lib/debug/.build-id/88/ -rw-r--r-- root/root 11168 2020-06-19 09:41 ./usr/lib/debug/.build-id/88/4e98ca9ed2d05d74dd1f250e3e160788c1edd5.debug drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/lib/debug/.build-id/a1/ -rw-r--r-- root/root 30296 2020-06-19 09:41 ./usr/lib/debug/.build-id/a1/3d7368c72634d9a0e1f8ad77012f465f448c53.debug drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/lib/debug/.build-id/af/ -rw-r--r-- root/root 22688 2020-06-19 09:41 ./usr/lib/debug/.build-id/af/897a2a0766cb48f3a717f23257f75188c9312f.debug drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/lib/debug/.dwz/s390x-linux-gnu/ -rw-r--r-- root/root 3744 2020-06-19 09:41 ./usr/lib/debug/.dwz/s390x-linux-gnu/samtools.debug drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/share/ drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-06-19 09:41 ./usr/share/doc/samtools-dbgsym -> samtools samtools_1.10-4_s390x.deb ------------------------- new Debian package, version 2.0. size 496140 bytes: control archive=2680 bytes. 889 bytes, 18 lines control 4792 bytes, 71 lines md5sums Package: samtools Version: 1.10-4 Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 1154 Depends: libc6 (>= 2.29), libhts3 (>= 1.10), libncurses6 (>= 6), libtinfo6 (>= 6), zlib1g (>= 1:1.1.4) Suggests: cwltool Breaks: bio-tradis (<= 1.4.5+dfsg-1), iva (<= 1.0.9+ds-6) Section: science Priority: optional Homepage: http://www.htslib.org/ Description: processing sequence alignments in SAM, BAM and CRAM formats Samtools is a set of utilities that manipulate nucleotide sequence alignments in the binary BAM format. It imports from and exports to the ascii SAM (Sequence Alignment/Map) and CRAM formats, does sorting, merging and indexing, and allows one to retrieve reads in any regions swiftly. It is designed to work on a stream, and is able to open a BAM or CRAM (not SAM) file on a remote FTP or HTTP server. drwxr-xr-x root/root 0 2020-06-19 09:41 ./ drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/ drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/bin/ -rwxr-xr-x root/root 22600 2020-06-19 09:41 ./usr/bin/ace2sam -rwxr-xr-x root/root 5437 2020-06-19 09:41 ./usr/bin/blast2sam.pl -rwxr-xr-x root/root 3360 2020-06-19 09:41 ./usr/bin/bowtie2sam.pl -rwxr-xr-x root/root 17996 2020-06-19 09:41 ./usr/bin/export2sam.pl -rwxr-xr-x root/root 6121 2020-06-19 09:41 ./usr/bin/interpolate_sam.pl -rwxr-xr-x root/root 10312 2020-06-19 09:41 ./usr/bin/maq2sam-long -rwxr-xr-x root/root 10312 2020-06-19 09:41 ./usr/bin/maq2sam-short -rwxr-xr-x root/root 14408 2020-06-19 09:41 ./usr/bin/md5fa -rwxr-xr-x root/root 10312 2020-06-19 09:41 ./usr/bin/md5sum-lite -rwxr-xr-x root/root 7969 2020-06-19 09:41 ./usr/bin/novo2sam.pl -rwxr-xr-x root/root 50473 2020-06-19 09:41 ./usr/bin/plot-bamstats -rwxr-xr-x root/root 3204 2020-06-19 09:41 ./usr/bin/psl2sam.pl -rwxr-xr-x root/root 8957 2020-06-19 09:41 ./usr/bin/sam2vcf.pl -rwxr-xr-x root/root 637200 2020-06-19 09:41 ./usr/bin/samtools -rwxr-xr-x root/root 16474 2020-06-19 09:41 ./usr/bin/samtools.pl -rwxr-xr-x root/root 11101 2020-06-19 09:41 ./usr/bin/seq_cache_populate.pl -rwxr-xr-x root/root 3905 2020-06-19 09:41 ./usr/bin/soap2sam.pl -rwxr-xr-x root/root 22640 2020-06-19 09:41 ./usr/bin/wgsim -rwxr-xr-x root/root 12536 2020-06-19 09:41 ./usr/bin/wgsim_eval.pl -rwxr-xr-x root/root 3579 2020-06-19 09:41 ./usr/bin/zoom2sam.pl drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/share/ drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/share/commonwl/ -rwxr-xr-x root/root 1906 2020-06-19 09:41 ./usr/share/commonwl/samtools-faidx.cwl -rwxr-xr-x root/root 1979 2020-06-19 09:41 ./usr/share/commonwl/samtools-index.cwl -rwxr-xr-x root/root 1627 2020-06-19 09:41 ./usr/share/commonwl/samtools-rmdup.cwl -rwxr-xr-x root/root 2834 2020-06-19 09:41 ./usr/share/commonwl/samtools-sort.cwl -rwxr-xr-x root/root 6224 2020-06-19 09:41 ./usr/share/commonwl/samtools-view.cwl drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/share/doc/samtools/ -rw-r--r-- root/root 828 2019-12-06 16:40 ./usr/share/doc/samtools/AUTHORS -rw-r--r-- root/root 369 2020-06-19 09:41 ./usr/share/doc/samtools/NEWS.Debian.gz -rw-r--r-- root/root 4030 2019-12-06 16:40 ./usr/share/doc/samtools/README -rw-r--r-- root/root 497 2020-06-19 09:41 ./usr/share/doc/samtools/README.Debian -rw-r--r-- root/root 5563 2020-06-19 09:41 ./usr/share/doc/samtools/changelog.Debian.gz -rw-r--r-- root/root 21669 2019-12-06 16:40 ./usr/share/doc/samtools/changelog.gz -rw-r--r-- root/root 2250 2020-06-19 09:41 ./usr/share/doc/samtools/copyright drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/share/doc/samtools/examples/ -rw-r--r-- root/root 1315 2019-12-06 16:40 ./usr/share/doc/samtools/examples/00README.txt -rw-r--r-- root/root 3225 2019-12-06 16:40 ./usr/share/doc/samtools/examples/ex1.fa -rw-r--r-- root/root 114565 2020-06-19 09:41 ./usr/share/doc/samtools/examples/ex1.sam.gz -rw-r--r-- root/root 98 2019-12-06 16:40 ./usr/share/doc/samtools/examples/toy.fa -rw-r--r-- root/root 786 2019-12-06 16:40 ./usr/share/doc/samtools/examples/toy.sam drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/share/lintian/ drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 220 2020-06-19 09:41 ./usr/share/lintian/overrides/samtools drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/share/man/ drwxr-xr-x root/root 0 2020-06-19 09:41 ./usr/share/man/man1/ -rw-r--r-- root/root 462 2020-06-19 09:41 ./usr/share/man/man1/ace2sam.1.gz -rw-r--r-- root/root 1498 2020-06-19 09:41 ./usr/share/man/man1/samtools-addreplacerg.1.gz -rw-r--r-- root/root 1451 2020-06-19 09:41 ./usr/share/man/man1/samtools-bedcov.1.gz -rw-r--r-- root/root 1797 2020-06-19 09:41 ./usr/share/man/man1/samtools-calmd.1.gz -rw-r--r-- root/root 1485 2020-06-19 09:41 ./usr/share/man/man1/samtools-cat.1.gz -rw-r--r-- root/root 2259 2020-06-19 09:41 ./usr/share/man/man1/samtools-collate.1.gz -rw-r--r-- root/root 1750 2020-06-19 09:41 ./usr/share/man/man1/samtools-depad.1.gz -rw-r--r-- root/root 2330 2020-06-19 09:41 ./usr/share/man/man1/samtools-depth.1.gz -rw-r--r-- root/root 1376 2020-06-19 09:41 ./usr/share/man/man1/samtools-dict.1.gz -rw-r--r-- root/root 2026 2020-06-19 09:41 ./usr/share/man/man1/samtools-faidx.1.gz -rw-r--r-- root/root 3451 2020-06-19 09:41 ./usr/share/man/man1/samtools-fasta.1.gz lrwxrwxrwx root/root 0 2020-06-19 09:41 ./usr/share/man/man1/samtools-fastq.1.gz -> samtools-fasta.1.gz -rw-r--r-- root/root 1436 2020-06-19 09:41 ./usr/share/man/man1/samtools-fixmate.1.gz -rw-r--r-- root/root 1378 2020-06-19 09:41 ./usr/share/man/man1/samtools-flags.1.gz -rw-r--r-- root/root 2438 2020-06-19 09:41 ./usr/share/man/man1/samtools-flagstat.1.gz -rw-r--r-- root/root 2077 2020-06-19 09:41 ./usr/share/man/man1/samtools-fqidx.1.gz -rw-r--r-- root/root 1413 2020-06-19 09:41 ./usr/share/man/man1/samtools-idxstats.1.gz -rw-r--r-- root/root 1546 2020-06-19 09:41 ./usr/share/man/man1/samtools-index.1.gz -rw-r--r-- root/root 2711 2020-06-19 09:41 ./usr/share/man/man1/samtools-markdup.1.gz -rw-r--r-- root/root 2692 2020-06-19 09:41 ./usr/share/man/man1/samtools-merge.1.gz -rw-r--r-- root/root 6288 2020-06-19 09:41 ./usr/share/man/man1/samtools-mpileup.1.gz -rw-r--r-- root/root 1424 2020-06-19 09:41 ./usr/share/man/man1/samtools-phase.1.gz -rw-r--r-- root/root 1675 2020-06-19 09:41 ./usr/share/man/man1/samtools-quickcheck.1.gz -rw-r--r-- root/root 1954 2020-06-19 09:41 ./usr/share/man/man1/samtools-reheader.1.gz -rw-r--r-- root/root 1468 2020-06-19 09:41 ./usr/share/man/man1/samtools-rmdup.1.gz -rw-r--r-- root/root 3096 2020-06-19 09:41 ./usr/share/man/man1/samtools-sort.1.gz -rw-r--r-- root/root 1592 2020-06-19 09:41 ./usr/share/man/man1/samtools-split.1.gz -rw-r--r-- root/root 5927 2020-06-19 09:41 ./usr/share/man/man1/samtools-stats.1.gz -rw-r--r-- root/root 1425 2020-06-19 09:41 ./usr/share/man/man1/samtools-targetcut.1.gz -rw-r--r-- root/root 1630 2020-06-19 09:41 ./usr/share/man/man1/samtools-tview.1.gz -rw-r--r-- root/root 4612 2020-06-19 09:41 ./usr/share/man/man1/samtools-view.1.gz -rw-r--r-- root/root 11236 2020-06-19 09:41 ./usr/share/man/man1/samtools.1.gz -rw-r--r-- root/root 410 2020-06-19 09:41 ./usr/share/man/man1/samtools.pl.1.gz -rw-r--r-- root/root 518 2020-06-19 09:41 ./usr/share/man/man1/wgsim.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [629 B] Get:5 copy:/<>/apt_archive ./ Packages [698 B] Fetched 2290 B in 0s (89.7 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-address-xs-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-socket-ssl-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl libmailtools-perl libmetrics-any-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtest-metrics-any-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libxml-parser-perl libdata-dump-perl ca-certificates libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libperl4-corelibs-perl libauthen-sasl-perl libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-address-xs-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-socket-ssl-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl libmailtools-perl libmetrics-any-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtest-metrics-any-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:s390x t1utils 0 upgraded, 83 newly installed, 0 to remove and 0 not upgraded. Need to get 9427 kB of archives. After this operation, 26.7 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-4 [72.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-4 [160 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 6.1 [19.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.63-1 [35.6 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.3-7.1 [50.5 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.20-1 [532 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.32.2-2 [752 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.20-1 [894 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b3 [71.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b2 [11.3 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1 [12.6 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b1 [15.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b2 [25.6 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1 [12.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b2 [46.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.24-1 [18.6 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b5 [38.4 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1 [15.1 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-tiny-perl all 2.24-1 [16.2 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.19-1 [126 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b1 [26.0 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-address-xs-perl amd64 1.04-1+b2 [28.1 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1g-1 [1543 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 5 [7360 B] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.88-3 [320 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.067-1 [212 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-1 [39.2 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.21-1 [95.5 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.24-1 [372 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002002-1 [37.8 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1 [7642 B] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.11-1 [8888 B] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1 [317 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.45-1 [84.4 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-4 [13.0 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-2 [90.2 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-5 [105 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.12-1 [12.9 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libmetrics-any-perl all 0.05-2 [36.8 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libtest-metrics-any-perl all 0.01-2 [7060 B] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.77-2 [273 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.8 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-loop-epoll-perl all 0.21-1 [12.1 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004002-1 [13.1 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.53-1 [68.9 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b5 [63.6 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-utilsby-perl all 0.11-1 [15.4 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.004000-1 [59.4 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1 [10.2 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b2 [12.0 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1 [13.5 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.114-1 [53.6 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.014+ds-1 [106 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.014+ds-1 [108 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.010002-1 [338 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b1 [20.2 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-writer-perl all 0.625-1 [29.7 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.82+repack-1 [35.6 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-3 [89.9 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.80.0 [1286 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 9427 kB in 0s (49.2 MB/s) Selecting previously unselected package readline-common. (Reading database ... 22354 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.1_all.deb ... Unpacking netbase (6.1) ... Selecting previously unselected package diffstat. Preparing to unpack .../03-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../04-libassuan0_2.5.3-7.1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7.1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.20-1_amd64.deb ... Unpacking gpgconf (2.2.20-1) ... Selecting previously unselected package libsqlite3-0:amd64. 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Selecting previously unselected package libyaml-libyaml-perl. Preparing to unpack .../78-libyaml-libyaml-perl_0.82+repack-1_amd64.deb ... Unpacking libyaml-libyaml-perl (0.82+repack-1) ... Selecting previously unselected package patchutils. Preparing to unpack .../79-patchutils_0.3.4-3_amd64.deb ... Unpacking patchutils (0.3.4-3) ... Selecting previously unselected package t1utils. Preparing to unpack .../80-t1utils_1.41-4_amd64.deb ... Unpacking t1utils (1.41-4) ... Selecting previously unselected package lintian. Preparing to unpack .../81-lintian_2.80.0_all.deb ... Unpacking lintian (2.80.0) ... Selecting previously unselected package sbuild-build-depends-lintian-dummy:s390x. Preparing to unpack .../82-sbuild-build-depends-lintian-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-lintian-dummy:s390x (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.36+b3) ... Setting up libunicode-utf8-perl (0.62-1+b1) ... Setting up libstruct-dumb-perl (0.12-1) ... Setting up libdynaloader-functions-perl (0.003-1) ... Setting up libtext-glob-perl (0.11-1) ... Setting up libclass-method-modifiers-perl (2.13-1) ... Setting up liblist-compare-perl (0.53-1) ... Setting up libclone-perl (0.45-1) ... Setting up libyaml-0-2:amd64 (0.2.2-1) ... Setting up libsub-identify-perl (0.14-1+b2) ... Setting up libcpanel-json-xs-perl (4.19-1) ... Setting up libssl1.1:amd64 (1.1.1g-1) ... Setting up libhtml-tagset-perl (3.20-4) ... Setting up libdevel-size-perl (0.83-1+b1) ... Setting up libsqlite3-0:amd64 (3.32.2-2) ... Setting up libfuture-perl (0.45-1) ... Setting up libyaml-libyaml-perl (0.82+repack-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up perl-openssl-defaults:amd64 (5) ... Setting up libtext-levenshtein-perl (0.13-1) ... Setting up libassuan0:amd64 (2.5.3-7.1) ... Setting up libconfig-tiny-perl (2.24-1) ... Setting up libsereal-encoder-perl (4.014+ds-1) ... Setting up liblist-utilsby-perl (0.11-1) ... 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I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 24504 Build-Time: 52 Distribution: unstable Foreign Architectures: s390x Host Architecture: s390x Install-Time: 24 Job: samtools_1.10-4 Lintian: pass Machine Architecture: amd64 Package: samtools Package-Time: 88 Source-Version: 1.10-4 Space: 24504 Status: successful Version: 1.10-4 -------------------------------------------------------------------------------- Finished at 2020-06-20T09:09:06Z Build needed 00:01:28, 24504k disk space